Blast (blastn, tblastx, tblastn) against
Maize Génoplante-Info contig database (GPI)
Blastx against Swall (SwissProt, Trembl, New)
Blast (blastn, tblastx)
against plant databases
Blastn against
NCBI
Primer definition for PCR
amplification of 3'UTRs (primer3)
Translation
CELL WALL KEYWORDS
ZINNIA SEQUENCES
Query (protein, nucleotide sequences)
FIRST STEP OF CONTIG SELECTION
(blast results)
SECOND STEP OF CONTIG SELECTION
(Only contigs with expected annotation)
CELL WALL GENE CATALOGUE
*Identification of maize mRNA
Identification of
homologs from other species
MAIZE CELL WALL
MACROARRAY
Multiple alignment tools :
Protein domain analysis tools :
EXPRESSION DATA
All information found within MAIZEWALL is indicated in black. The bioinformatic tools available to the user are indicated in blue.
* During the course of this work, a large number of maize ESTs were released (Gardiner et al., 2004). For this reason, a second
NCBI search for maize genes was performed to complete existing data.
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