TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012873.2.2
(1520 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots S... 393 e-108
gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1... 350 e-101
gb|CN129192.1|CN129192 RHOH1_34_B10.b3_A002 Acid- and alkal... 330 9e-095
gb|BE360923.1|BE360923 DG1_67_G03.g1_A002 Dark Grown 1 (DG1... 330 9e-095
gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1... 330 3e-094
gb|BE362152.1|BE362152 DG1_84_D11.g1_A002 Dark Grown 1 (DG1... 330 3e-094
gb|CX607016.1|CX607016 ANR1_6_E09.b1_A002 Anaerobic roots S... 326 2e-093
gb|CN138460.1|CN138460 OX1_64_A03.b1_A002 Oxidatively-stres... 328 3e-093
gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stres... 340 3e-092
gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkal... 322 1e-086
gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated ... 319 7e-086
gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stres... 318 1e-085
gb|BG051912.1|BG051912 RHIZ2_6_E04.g1_A003 Rhizome2 (RHIZ2)... 268 2e-077
gb|BE360762.1|BE360762 DG1_66_C04.g2_A002 Dark Grown 1 (DG1... 277 1e-076
gb|AW678856.1|AW678856 WS1_1_A12.g1_A002 Water-stressed 1 (... 257 9e-073
gb|CX608225.1|CX608225 ANR1_37_H09.b1_A002 Anaerobic roots ... 253 1e-071
gb|CW346174.1|CW346174 104_849_11488883_148_36218_040 Sorgh... 127 3e-070
gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stres... 259 1e-067
gb|CN137446.1|CN137446 OX1_57_G07.b1_A002 Oxidatively-stres... 239 2e-067
gb|BM318321.1|BM318321 PI1_77_C02.g9_A002 Pathogen induced ... 239 1e-066
gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots ... 253 5e-066
gb|CD228671.1|CD228671 CCC1_9_E11.b1_A007 Callus culture/ce... 234 6e-066
gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed see... 251 2e-065
gb|CN137561.1|CN137561 OX1_58_D03.b1_A002 Oxidatively-stres... 204 6e-057
gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots ... 222 9e-057
gb|CX608520.1|CX608520 ANR1_39_C06.b1_A002 Anaerobic roots ... 195 2e-054
gb|CN125480.1|CN125480 RHOH1_11_G11.b1_A002 Acid- and alkal... 193 1e-053
gb|CB927052.1|CB927052 ABA1_13_F08.b1_A012 Abscisic acid-tr... 189 1e-052
gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-defic... 204 3e-051
gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficie... 204 3e-051
gb|CW480229.1|CW480229 fsbb001f239d02f0 Sorghum methylation... 109 2e-050
gb|CD210709.1|CD210709 HS1_49_C07.b1_A012 Heat-shocked seed... 126 2e-049
gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1... 193 8e-048
gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1... 193 8e-048
gb|CB927150.1|CB927150 ABA1_13_F08.g1_A012 Abscisic acid-tr... 190 4e-047
gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stress... 141 5e-046
gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves... 78 7e-046
gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkal... 96 2e-043
gb|BI141372.1|BI141372 IP1_55_B03.g1_A002 Immature pannicle... 157 3e-043
gb|CD228754.1|CD228754 CCC1_9_E11.g1_A007 Callus culture/ce... 177 5e-043
gb|BE362094.1|BE362094 DG1_84_C11.b1_A002 Dark Grown 1 (DG1... 174 4e-042
gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/c... 76 3e-041
gb|CW317851.1|CW317851 104_809_11473636_148_35864_002 Sorgh... 106 5e-041
gb|CW148381.1|CW148381 104_547_11141925_148_35008_095 Sorgh... 80 7e-041
gb|CW486807.1|CW486807 fsbb001f252e20f0 Sorghum methylation... 157 1e-040
gb|CW393089.1|CW393089 fsbb001f079p24f0 Sorghum methylation... 157 1e-040
gb|CL178474.1|CL178474 104_386_10894614_116_31912_294 Sorgh... 79 4e-040
gb|CW287590.1|CW287590 104_765_11411495_116_35521_084 Sorgh... 91 7e-040
gb|CW148380.1|CW148380 104_547_11141925_116_35012_095 Sorgh... 66 4e-039
gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorgh... 137 6e-039
gb|CW185694.1|CW185694 104_603_11166185_148_36702_073 Sorgh... 137 6e-039
gb|CF070740.1|CF070740 FE1_4_B05.b1_A002 Iron-deficient see... 133 1e-038
gb|CF428989.1|CF428989 PH1_19_G12.b1_A002 Phosphorous-defic... 111 2e-038
gb|CW346173.1|CW346173 104_849_11488883_116_36217_040 Sorgh... 109 8e-038
gb|CW196299.1|CW196299 104_620_11181097_148_36814_011 Sorgh... 109 8e-038
gb|CW480230.1|CW480230 fsbb001f239d02k0 Sorghum methylation... 109 8e-038
gb|CD430520.1|CD430520 ETH1_19_A12.b1_A002 Ethylene-treated... 153 6e-036
emb|AX512962.1| Sequence 7 from Patent WO02063021 77 6e-036
gb|BG048617.1|BG048617 OV1_14_H08.b1_A002 Ovary 1 (OV1) Sor... 100 6e-036
gb|CW317382.1|CW317382 104_809_11473385_148_35865_077 Sorgh... 102 7e-036
gb|CF480908.1|CF480908 POL1_68_F11.g1_A002 Pollen Sorghum b... 78 1e-035
gb|CF485730.1|CF485730 POL1_33_F08.b1_A002 Pollen Sorghum b... 149 7e-035
gb|CX608598.1|CX608598 ANR1_39_C06.g1_A002 Anaerobic roots ... 149 1e-034
gb|CW247120.1|CW247120 104_708_11221624_148_36079_064 Sorgh... 79 5e-034
gb|BE599908.1|BE599908 PI1_77_C02.b1_A002 Pathogen induced ... 145 1e-033
gb|CD210805.1|CD210805 HS1_49_C07.g1_A012 Heat-shocked seed... 144 3e-033
gb|CN124236.1|CN124236 RHOH1_3_B09.g1_A002 Acid- and alkali... 100 6e-033
gb|BI211450.1|BI211450 IP1_60_H10.b1_A002 Immature pannicle... 62 8e-033
gb|BI351580.1|BI351580 IP1_72_F10.b1_A002 Immature pannicle... 62 8e-033
gb|CD213428.1|CD213428 HS1_40_A07.g1_A012 Heat-shocked seed... 133 1e-032
gb|AW283667.1|AW283667 LG1_222_A08.g1_A002 Light Grown 1 (L... 119 7e-032
gb|CX612381.1|CX612381 GABR1_2_D06.b1_A002 GA- or brassinol... 135 1e-031
gb|CB925802.1|CB925802 ABA1_23_F05.g1_A012 Abscisic acid-tr... 65 2e-031
gb|BE357273.1|BE357273 DG1_148_D02.b1_A002 Dark Grown 1 (DG... 138 3e-031
gb|CF428334.1|CF428334 PH1_14_C04.g1_A002 Phosphorous-defic... 65 3e-031
gb|CN145669.1|CN145669 WOUND1_34_B03.g1_A002 Wounded leaves... 59 6e-031
gb|CD430959.1|CD430959 ETH1_6_A10.b1_A002 Ethylene-treated ... 136 1e-030
gb|CW287591.1|CW287591 104_765_11411495_148_35525_084 Sorgh... 91 1e-030
gb|CW491513.1|CW491513 fsbb001f281g15f0 Sorghum methylation... 84 2e-030
gb|BG946962.1|BG946962 IP1_1_H02.b1_A002 Immature pannicle ... 63 5e-030
gb|BE359158.1|BE359158 DG1_39_C02.b1_A002 Dark Grown 1 (DG1... 133 5e-030
gb|BE363053.1|BE363053 DG1_9_D02.b1_A002 Dark Grown 1 (DG1)... 133 9e-030
gb|CB925013.1|CB925013 ABA1_29_B06.g1_A012 Abscisic acid-tr... 133 9e-030
gb|CD206423.1|CD206423 HS1_22_G03.g1_A012 Heat-shocked seed... 133 9e-030
gb|CF428507.1|CF428507 PH1_15_D07.g1_A002 Phosphorous-defic... 132 1e-029
gb|CF482349.1|CF482349 POL1_6_A05.g1_A002 Pollen Sorghum bi... 78 2e-029
gb|CW436323.1|CW436323 fsbb001f152o03f0 Sorghum methylation... 83 2e-029
gb|BE362098.1|BE362098 DG1_84_D11.b1_A002 Dark Grown 1 (DG1... 131 2e-029
gb|BZ351615.1|BZ351615 hw04e11.g1 WGS-SbicolorF (JM107 adap... 84 3e-029
gb|AF010283.1| Sorghum bicolor ADP-glucose pyrophosphorylas... 53 5e-029
gb|CW408711.1|CW408711 fsbb001f102l13k0 Sorghum methylation... 82 5e-029
gb|CW304703.1|CW304703 104_789_11465922_116_35702_067 Sorgh... 84 8e-029
gb|CD430564.1|CD430564 ETH1_19_A12.g1_A002 Ethylene-treated... 129 1e-028
gb|CN147237.1|CN147237 WOUND1_48_B05.g1_A002 Wounded leaves... 58 2e-028
gb|CW090504.1|CW090504 104_436_10949318_116_32611_057 Sorgh... 81 2e-028
gb|BI141055.1|BI141055 IP1_42_E11.b1_A002 Immature pannicle... 62 2e-028
gb|CN128033.1|CN128033 RHOH1_26_C10.g1_A002 Acid- and alkal... 99 4e-028
gb|CF756225.1|CF756225 DSAF1_4_G03.b1_A011 Drought-stressed... 93 1e-027
gb|CW307093.1|CW307093 104_795_11467960_148_35737_064 Sorgh... 81 2e-027
gb|CD206390.1|CD206390 HS1_22_H01.g1_A012 Heat-shocked seed... 125 2e-027
gb|BZ347040.1|BZ347040 hw04e11.b1 WGS-SbicolorF (JM107 adap... 74 3e-027
gb|CN135147.1|CN135147 OX1_30_G11.g1_A002 Oxidatively-stres... 79 4e-027
gb|CB925645.1|CB925645 ABA1_22_G02.g1_A012 Abscisic acid-tr... 58 5e-027
gb|BM323476.1|BM323476 PIC1_19_G04.b1_A002 Pathogen-infecte... 73 7e-027
gb|CF485803.1|CF485803 POL1_33_F08.g1_A002 Pollen Sorghum b... 79 2e-026
gb|AW678763.1|AW678763 WS1_1_A12.b2_A002 Water-stressed 1 (... 121 2e-026
gb|BZ367897.1|BZ367897 id07b12.g1 WGS-SbicolorF (JM107 adap... 79 3e-026
gb|CW316181.1|CW316181 104_807_11472758_116_35843_055 Sorgh... 77 1e-025
gb|CW338277.1|CW338277 104_838_11484658_116_36129_039 Sorgh... 77 1e-025
gb|AW671852.1|AW671852 LG1_352_C05.b1_A002 Light Grown 1 (L... 80 1e-025
gb|CW152652.1|CW152652 104_554_11144606_148_37482_063 Sorgh... 84 1e-025
gb|CW217859.1|CW217859 104_651_11195875_148_37457_076 Sorgh... 79 2e-025
gb|CW098263.1|CW098263 104_464_11002911_148_34364_052 Sorgh... 79 2e-025
gb|BG557816.1|BG557816 EM1_53_F09.b1_A002 Embryo 1 (EM1) So... 56 2e-025
gb|BZ342273.1|BZ342273 ic81e11.b1 WGS-SbicolorF (JM107 adap... 84 3e-025
gb|CW408710.1|CW408710 fsbb001f102l13f0 Sorghum methylation... 84 3e-025
gb|CD227332.1|CD227332 CCC1_50_B06.g1_A007 Callus culture/c... 67 3e-025
gb|CW192938.1|CW192938 104_615_11179297_116_36769_005 Sorgh... 69 4e-025
gb|CW403430.1|CW403430 fsbb001f095c10k0 Sorghum methylation... 69 4e-025
gb|CW340854.1|CW340854 104_842_11486016_116_36172_096 Sorgh... 80 9e-025
gb|CW340855.1|CW340855 104_842_11486016_148_36171_096 Sorgh... 80 9e-025
gb|CW254776.1|CW254776 104_719_11225861_148_35126_029 Sorgh... 77 1e-024
gb|CL173566.1|CL173566 104_377_10890963_116_31793_099 Sorgh... 79 1e-024
gb|CW456492.1|CW456492 fsbb001f201n16k0 Sorghum methylation... 76 2e-024
gb|BM324463.1|BM324463 PIC1_31_E07.b1_A002 Pathogen-infecte... 89 3e-024
gb|CW266537.1|CW266537 104_736_11232481_116_35281_009 Sorgh... 74 6e-024
gb|CW087332.1|CW087332 104_431_10947561_116_32569_033 Sorgh... 67 9e-024
gb|CB926819.1|CB926819 ABA1_10_G05.g1_A012 Abscisic acid-tr... 58 2e-023
gb|BG947892.1|BG947892 IP1_6_F06.b1_A002 Immature pannicle ... 59 2e-023
gb|CW377684.1|CW377684 fsbb001f056b22f0 Sorghum methylation... 106 2e-023
gb|CX614598.1|CX614598 GABR1_15_C04.b1_A002 GA- or brassino... 79 3e-023
gb|CN125588.1|CN125588 RHOH1_12_B03.b1_A002 Acid- and alkal... 79 3e-023
gb|CW183575.1|CW183575 104_599_11164688_148_36677_024 Sorgh... 84 5e-023
gb|CF756413.1|CF756413 DSAF1_5_H08.b1_A011 Drought-stressed... 91 6e-023
gb|CW269378.1|CW269378 104_740_11401813_116_36229_055 Sorgh... 84 7e-023
gb|CL158053.1|CL158053 104_346_10803269_116_31376_245 Sorgh... 78 7e-023
gb|BZ331519.1|BZ331519 hw10a10.b1 WGS-SbicolorF (JM107 adap... 62 7e-023
gb|CX614668.1|CX614668 GABR1_15_C04.g1_A002 GA- or brassino... 88 8e-023
gb|CW332608.1|CW332608 104_830_11481507_116_36036_010 Sorgh... 78 1e-022
gb|CW311014.1|CW311014 104_800_11470012_148_36244_010 Sorgh... 67 1e-022
gb|CW307337.1|CW307337 104_795_11468086_148_36060_089 Sorgh... 53 2e-022
gb|CW344753.1|CW344753 104_847_11488123_116_36201_072 Sorgh... 53 2e-022
gb|BE592843.1|BE592843 WS1_91_B04.b1_A002 Water-stressed 1 ... 55 2e-022
gb|CL183456.1|CL183456 104_396_10898188_114_31923_028 Sorgh... 80 2e-022
gb|CN124163.1|CN124163 RHOH1_3_B09.b1_A002 Acid- and alkali... 83 3e-022
gb|CF756307.1|CF756307 DSAF1_4_G03.g1_A011 Drought-stressed... 84 3e-022
gb|CW254775.1|CW254775 104_719_11225861_116_35122_029 Sorgh... 79 4e-022
gb|CW031414.1|CW031414 104_260_10500796_114_30365 Sorghum m... 68 6e-022
gb|CW305139.1|CW305139 104_790_11466160_116_37435_058 Sorgh... 84 9e-022
gb|CN146030.1|CN146030 WOUND1_37_A04.b1_A002 Wounded leaves... 73 1e-021
gb|CW332609.1|CW332609 104_830_11481507_148_36035_010 Sorgh... 78 1e-021
gb|AW923197.1|AW923197 DG1_50_E07.b1_A002 Dark Grown 1 (DG1... 105 1e-021
gb|CD430950.1|CD430950 ETH1_6_A08.b1_A002 Ethylene-treated ... 105 2e-021
gb|CW098262.1|CW098262 104_464_11002911_116_34360_052 Sorgh... 79 2e-021
gb|CD228254.1|CD228254 CCC1_6_B12.g1_A007 Callus culture/ce... 58 2e-021
gb|CD234981.1|CD234981 SS1_19_A07.g1_A012 Salt-stressed see... 53 3e-021
gb|CW203138.1|CW203138 104_629_11185470_116_36913_021 Sorgh... 77 3e-021
gb|BE360812.1|BE360812 DG1_67_G03.b2_A002 Dark Grown 1 (DG1... 102 8e-021
>gb|CX607102.1|CX607102 ANR1_6_E09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 5', mRNA sequence
Length = 742
Score = 393 bits (852), Expect = e-108
Identities = 160/172 (93%), Positives = 163/172 (94%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTV NPDDPKNAHLK LDGAAERLILCKAD
Sbjct: 191 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVWNPDDPKNAHLKGLDGAAERLILCKAD 370
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAICRAVQGCQGVF T SPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS
Sbjct: 371 LLDYDAICRAVQGCQGVFRTGSPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 550
Query: 651 IGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAAWETARRR 806
IGAVTMDP RGPDVVVDESCWSDL FC+KTRNWYCYGKAVAE AAW+ AR R
Sbjct: 551 IGAVTMDPSRGPDVVVDESCWSDL*FCKKTRNWYCYGKAVAEQAAWDAARHR 706
Score = 318 bits (688), Expect = 2e-085
Identities = 137/169 (81%), Positives = 140/169 (82%)
Frame = -2 / -2
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A SHAACSATALP*QYQFLVF QN RSLQHDSSTTTSGPRLGSMVTAP++DVNTTRRTVP
Sbjct: 696 AASHAACSATALP*QYQFLVFLQN*RSLQHDSSTTTSGPRLGSMVTAPIEDVNTTRRTVP 517
Query: 616 ASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXA 437
ASAAALITYSVPRTAGSTICSGSSVTGE V KTPWQPCT A
Sbjct: 516 ASAAALITYSVPRTAGSTICSGSSVTGEPVRKTPWQPCTARQMAS*SRRSALQRISRSAA 337
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
PSS LRCAFFGSSGF TVP TVYPFSSS FT+HEAMYPAAPVTHTVCPF
Sbjct: 336 PSSPLRCAFFGSSGFQTVPLTVYPFSSSIFTSHEAMYPAAPVTHTVCPF 190
Score = 135 bits (289), Expect(2) = 6e-058
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQ LEVRVLRVIWVPDGAL SVSLLEQ LH+PRGDVPGRAG AHG
Sbjct: 379 VQEVGLAEDQPLGRAVQPLEVRVLRVIWVPDGALDSVSLLEQHLHEPRGDVPGRAGDAHG 200
Query: 299 LPVP 288
LPVP
Sbjct: 199 LPVP 188
Score = 111 bits (238), Expect(2) = 6e-058
Identities = 44/49 (89%), Positives = 45/49 (91%)
Frame = -1 / -1
Query: 743 PGFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
PGFLAELEVAPARLVDHDVGPA GVHGH +D REHHPPHRAGLRRRVD
Sbjct: 643 PGFLAELEVAPARLVDHDVGPAAGVHGHRSDRGREHHPPHRAGLRRRVD 497
Score = 96.4 bits (204), Expect(3) = 5e-026
Identities = 42/63 (66%), Positives = 42/63 (66%)
Frame = +1 / +3
Query: 289 GTGRPCA*PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARP 468
GTGRPCA PARPGTSPRG * CCSRRDTL RAPSG A PSG*SSARP
Sbjct: 189 GTGRPCASPARPGTSPRGS*RCCSRRDTLSRAPSGTQMTRRTRTSRGWTARPSG*SSARP 368
Query: 469 ICW 477
W
Sbjct: 369 TSW 377
Score = 45.1 bits (92), Expect(3) = 5e-026
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +1 / +3
Query: 628 GGWCSRRPSAP*PWTPSAGPXXXXXXXXXXXXXXXRK 738
GGWCSR S *PWTP+AGP RK
Sbjct: 528 GGWCSRPLSER*PWTPAAGPTSWSTSRAGATSSSARK 638
Score = 22.1 bits (42), Expect(3) = 5e-026
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2 / +1
Query: 737 NQELVLLRQ 763
NQELVLLRQ
Sbjct: 637 NQELVLLRQ 663
>gb|BE360688.1|BE360688 DG1_66_C04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 350 bits (759), Expect(2) = e-101
Identities = 141/147 (95%), Positives = 144/147 (97%)
Frame = +3 / +1
Query: 366 GYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVT 545
GYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVT
Sbjct: 10 GYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVT 189
Query: 546 DDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLE 725
DDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDP RGPDVVVDESCWSDLE
Sbjct: 190 DDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPSRGPDVVVDESCWSDLE 369
Query: 726 FCEKTRNWYCYGKAVAEHAAWETARRR 806
FC+KTRNWYCYGKAVAE AAW+ AR+R
Sbjct: 370 FCKKTRNWYCYGKAVAEQAAWDAARQR 450
Score = 310 bits (671), Expect = 4e-083
Identities = 136/182 (74%), Positives = 137/182 (75%)
Frame = -2 / -2
Query: 910 EPSRYLRMCAMLAFTVACXXXXXXXXXXXXXXXXXXXRAVSHAACSATALP*QYQFLVFS 731
EPSRYL CAMLAFTV C RA SHAACSATALP*QYQFLVF
Sbjct: 554 EPSRYLSTCAMLAFTVGCSSGPTTSTGFTTTRSTPRCRAASHAACSATALP*QYQFLVFL 375
Query: 730 QNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSG 551
QNSRSLQHDSSTTTSGPRLGSMVTAPM+DVNTTRRTVPASAAALITYSVPRTAGSTICSG
Sbjct: 374 QNSRSLQHDSSTTTSGPRLGSMVTAPMEDVNTTRRTVPASAAALITYSVPRTAGSTICSG 195
Query: 550 SSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTV 371
SSVTGEAVWKTPWQPCT APSSALRCAFFGSSGFLTVP TV
Sbjct: 194 SSVTGEAVWKTPWQPCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTV 15
Query: 370 YP 365
YP
Sbjct: 14 YP 9
Score = 116 bits (249), Expect(3) = 8e-049
Identities = 46/49 (93%), Positives = 46/49 (93%)
Frame = -1 / -1
Query: 743 PGFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
PGFLAELEVAPARLVDHDVGPA GVHGH ADG REHHPPHRAGLRRRVD
Sbjct: 387 PGFLAELEVAPARLVDHDVGPAAGVHGHRADGGREHHPPHRAGLRRRVD 241
Score = 80.3 bits (169), Expect(3) = 8e-049
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVS 366
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVS
Sbjct: 123 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVS 10
Score = 40.5 bits (82), Expect(2) = e-101
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGS 911
Q TVNASIAH+LKYLDGS
Sbjct: 502 QPTVNASIAHVLKYLDGS 555
Score = 37.7 bits (76), Expect(3) = 8e-049
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -1 / -1
Query: 908 AVQVLEDVRDAGVHRRL 858
AVQVLE VRDAGVHRRL
Sbjct: 552 AVQVLEHVRDAGVHRRL 502
>gb|CN129192.1|CN129192 RHOH1_34_B10.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_B10_A002 3', mRNA sequence
Length = 795
Score = 330 bits (716), Expect(3) = 9e-095
Identities = 141/165 (85%), Positives = 148/165 (89%)
Frame = +3 / +2
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNASIAH+LKYLDGSARTFANAVQAYVDVRDVADAHLRVFESP ASGR+LCAERVLH
Sbjct: 38 QPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLH 217
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
REDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNL
Sbjct: 218 REDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNL 397
Query: 1218 QEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
QEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 398 QEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 532
Score = 257 bits (555), Expect(3) = 4e-071
Identities = 111/168 (66%), Positives = 116/168 (69%)
Frame = -2 / -1
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 540 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 361
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 360 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 181
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
A GLSKTRRCASATSRTSTYACTALAKVRAEPSRYL CAMLAFTV C
Sbjct: 180 AAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 37
Score = 143 bits (307), Expect(5) = 7e-051
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -3
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 427 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 248
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 247 LGEDADDVLAVEDALGAEVSAGRGGALEDAE 155
Score = 42.8 bits (87), Expect(5) = 7e-051
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 923 EGAGRAVQVLEDVRDAGVHRRL 858
EGA AVQVLE VRDAGVHRRL
Sbjct: 103 EGARGAVQVLEHVRDAGVHRRL 38
Score = 41.4 bits (84), Expect(5) = 7e-051
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 509 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 414
Score = 31.8 bits (63), Expect(3) = 9e-095
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 557 FILLPCPCCVNK 592
Score = 30.4 bits (60), Expect(3) = 4e-071
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 589 VYTAGAGQQYE*TLLF 542
Score = 27.2 bits (53), Expect(5) = 7e-051
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 597 SSLFTQQGQGSSMN 556
Score = 26.7 bits (52), Expect(3) = 9e-095
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 643 NVMFVLVNYSD 675
Score = 22.6 bits (43), Expect(5) = 7e-051
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 674 SL*FTRTNITFTSL 633
Score = 22.6 bits (43), Expect(3) = 4e-071
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 675 ITIVHKNEHYV 643
>gb|BE360923.1|BE360923 DG1_67_G03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 642
Score = 330 bits (716), Expect(3) = 9e-095
Identities = 141/165 (85%), Positives = 148/165 (89%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNASIAH+LKYLDGSARTFANAVQAYVDVRDVADAHLRVFESP ASGR+LCAERVLH
Sbjct: 1 QPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLH 180
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
REDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNL
Sbjct: 181 REDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNL 360
Query: 1218 QEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
QEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 361 QEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 495
Score = 253 bits (546), Expect(3) = 6e-070
Identities = 110/166 (66%), Positives = 115/166 (69%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 503 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 324
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 323 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 144
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTV 863
A GLSKTRRCASATSRTSTYACTALAKVRAEPSRYL CAMLAFTV
Sbjct: 143 AAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTV 6
Score = 143 bits (307), Expect(5) = 7e-051
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 390 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 211
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 210 LGEDADDVLAVEDALGAEVSAGRGGALEDAE 118
Score = 42.8 bits (87), Expect(5) = 7e-051
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 923 EGAGRAVQVLEDVRDAGVHRRL 858
EGA AVQVLE VRDAGVHRRL
Sbjct: 66 EGARGAVQVLEHVRDAGVHRRL 1
Score = 41.4 bits (84), Expect(5) = 7e-051
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 472 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 377
Score = 31.8 bits (63), Expect(3) = 9e-095
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 520 FILLPCPCCVNK 555
Score = 30.4 bits (60), Expect(3) = 6e-070
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 552 VYTAGAGQQYE*TLLF 505
Score = 27.2 bits (53), Expect(5) = 7e-051
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 560 SSLFTQQGQGSSMN 519
Score = 26.7 bits (52), Expect(3) = 9e-095
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 606 NVMFVLVNYSD 638
Score = 22.6 bits (43), Expect(5) = 7e-051
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 637 SL*FTRTNITFTSL 596
Score = 22.6 bits (43), Expect(3) = 6e-070
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 638 ITIVHKNEHYV 606
>gb|BE362142.1|BE362142 DG1_84_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 330 bits (716), Expect(3) = 3e-094
Identities = 141/165 (85%), Positives = 148/165 (89%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNASIAH+LKYLDGSARTFANAVQAYVDVRDVADAHLRVFESP ASGR+LCAERVLH
Sbjct: 55 QPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLH 234
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
REDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNL
Sbjct: 235 REDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNL 414
Query: 1218 QEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
QEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 415 QEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 549
Score = 257 bits (555), Expect(3) = 3e-071
Identities = 111/168 (66%), Positives = 116/168 (69%)
Frame = -2 / -1
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 557 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 378
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 377 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 198
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
A GLSKTRRCASATSRTSTYACTALAKVRAEPSRYL CAMLAFTV C
Sbjct: 197 AAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 54
Score = 143 bits (307), Expect(4) = 2e-049
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -3
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 444 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 265
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 264 LGEDADDVLAVEDALGAEVSAGRGGALEDAE 172
Score = 42.8 bits (87), Expect(4) = 2e-049
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 923 EGAGRAVQVLEDVRDAGVHRRL 858
EGA AVQVLE VRDAGVHRRL
Sbjct: 120 EGARGAVQVLEHVRDAGVHRRL 55
Score = 41.4 bits (84), Expect(4) = 2e-049
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 526 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 431
Score = 31.8 bits (63), Expect(3) = 3e-094
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 574 FILLPCPCCVNK 609
Score = 30.4 bits (60), Expect(3) = 3e-071
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 606 VYTAGAGQQYE*TLLF 559
Score = 27.2 bits (53), Expect(4) = 2e-049
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 614 SSLFTQQGQGSSMN 573
Score = 24.9 bits (48), Expect(3) = 3e-094
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYSE 1473
NVMFV VNYS+
Sbjct: 660 NVMFVFVNYSD 692
Score = 23.1 bits (44), Expect(3) = 3e-071
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 1479 YSLAIVHKNEHDV 1441
+ + IVHKNEH V
Sbjct: 698 FLITIVHKNEHYV 660
>gb|BE362152.1|BE362152 DG1_84_D11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 678
Score = 330 bits (716), Expect(3) = 3e-094
Identities = 141/165 (85%), Positives = 148/165 (89%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNASIAH+LKYLDGSARTFANAVQAYVDVRDVADAHLRVFESP ASGR+LCAERVLH
Sbjct: 34 QPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLH 213
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
REDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNL
Sbjct: 214 REDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNL 393
Query: 1218 QEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
QEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 394 QEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 528
Score = 257 bits (555), Expect(3) = 3e-071
Identities = 111/168 (66%), Positives = 116/168 (69%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 536 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 357
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 356 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 177
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
A GLSKTRRCASATSRTSTYACTALAKVRAEPSRYL CAMLAFTV C
Sbjct: 176 AAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 33
Score = 143 bits (307), Expect(4) = 2e-049
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 423 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 244
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 243 LGEDADDVLAVEDALGAEVSAGRGGALEDAE 151
Score = 42.8 bits (87), Expect(4) = 2e-049
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 923 EGAGRAVQVLEDVRDAGVHRRL 858
EGA AVQVLE VRDAGVHRRL
Sbjct: 99 EGARGAVQVLEHVRDAGVHRRL 34
Score = 41.4 bits (84), Expect(4) = 2e-049
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 505 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 410
Score = 31.8 bits (63), Expect(3) = 3e-094
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 553 FILLPCPCCVNK 588
Score = 30.4 bits (60), Expect(3) = 3e-071
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 585 VYTAGAGQQYE*TLLF 538
Score = 27.2 bits (53), Expect(4) = 2e-049
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 593 SSLFTQQGQGSSMN 552
Score = 24.9 bits (48), Expect(3) = 3e-094
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYSE 1473
NVMFV VNYS+
Sbjct: 639 NVMFVFVNYSD 671
Score = 23.1 bits (44), Expect(3) = 3e-071
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 1479 YSLAIVHKNEHDV 1441
+ + IVHKNEH V
Sbjct: 677 FLITIVHKNEHYV 639
>gb|CX607016.1|CX607016 ANR1_6_E09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_E09_A002 3', mRNA sequence
Length = 667
Score = 326 bits (706), Expect(3) = 2e-093
Identities = 139/165 (84%), Positives = 146/165 (88%)
Frame = +3 / +2
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNASIAH+LKYLDGSARTFANAVQAYVDVRDVADAH RV ESP ASGR+LCAERVLH
Sbjct: 2 QPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHFRVLESPAASGRYLCAERVLH 181
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
REDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNL
Sbjct: 182 REDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNL 361
Query: 1218 QEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
QEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 362 QEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 496
Score = 255 bits (552), Expect(3) = 1e-070
Identities = 110/168 (65%), Positives = 116/168 (69%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 504 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 325
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 324 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 145
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVAC 857
A GLSKTR+CASATSRTSTYACTALAKVRAEPSRYL CAMLAFTV C
Sbjct: 144 AAGLSKTRKCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGC 1
Score = 135 bits (290), Expect(5) = 5e-048
Identities = 62/91 (68%), Positives = 69/91 (75%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVG PG DGVLGEE
Sbjct: 391 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGTPGGDGVLGEE 212
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L A+V+AGR GAL DAE
Sbjct: 211 LGEDADDVLAVEDALGAKVSAGRGGAL*DAE 119
Score = 41.4 bits (84), Expect(5) = 5e-048
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 473 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 378
Score = 40.9 bits (83), Expect(5) = 5e-048
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -1
Query: 923 EGAGRAVQVLEDVRDAGVHRRL 858
EGA VQVLE VRDAGVHRRL
Sbjct: 67 EGARGTVQVLEHVRDAGVHRRL 2
Score = 31.8 bits (63), Expect(3) = 2e-093
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 521 FILLPCPCCVNK 556
Score = 30.4 bits (60), Expect(3) = 1e-070
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 553 VYTAGAGQQYE*TLLF 506
Score = 27.2 bits (53), Expect(5) = 5e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 561 SSLFTQQGQGSSMN 520
Score = 26.7 bits (52), Expect(3) = 2e-093
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 607 NVMFVLVNYSD 639
Score = 22.6 bits (43), Expect(5) = 5e-048
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 638 SL*FTRTNITFTSL 597
Score = 22.6 bits (43), Expect(3) = 1e-070
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 639 ITIVHKNEHYV 607
>gb|CN138460.1|CN138460 OX1_64_A03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A03_A002 3', mRNA sequence
Length = 747
Score = 328 bits (711), Expect(3) = 3e-093
Identities = 140/165 (84%), Positives = 147/165 (89%)
Frame = +3 / +3
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNASIAH+LKYLDGSARTFANAVQAYVDVRDVADAHLRVFESP ASGR+LCAERVLH
Sbjct: 81 QPTVNASIAHVLKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPAASGRYLCAERVLH 260
Query: 1038 REDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNL 1217
REDVVR LAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNL
Sbjct: 261 REDVVRTLAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNL 440
Query: 1218 QEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
QEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 441 QEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 575
Score = 261 bits (565), Expect(3) = 1e-073
Identities = 117/194 (60%), Positives = 122/194 (62%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 583 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 404
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 403 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARVRTTSSRWRTRSAQRYRPD 224
Query: 1000 ARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXXXX 821
A GLSKTRRCASATSRTSTYACTALAKVRAEPSRYL CAMLAFTV C
Sbjct: 223 AAGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLSTCAMLAFTVGCCSGPTTSTGFTT 44
Query: 820 XXXXXXXRAVSHAA 779
RA SHAA
Sbjct: 43 TRSTPRCRAASHAA 2
Score = 143 bits (307), Expect(5) = 5e-051
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 470 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 291
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 290 LGEGADDVLAVEDALGAEVSAGRGGALEDAE 198
Score = 42.8 bits (87), Expect(5) = 5e-051
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 923 EGAGRAVQVLEDVRDAGVHRRL 858
EGA AVQVLE VRDAGVHRRL
Sbjct: 146 EGARGAVQVLEHVRDAGVHRRL 81
Score = 41.4 bits (84), Expect(5) = 5e-051
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 552 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 457
Score = 31.8 bits (63), Expect(3) = 3e-093
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 600 FILLPCPCCVNK 635
Score = 30.4 bits (60), Expect(3) = 1e-073
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 632 VYTAGAGQQYE*TLLF 585
Score = 27.2 bits (53), Expect(5) = 5e-051
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 640 SSLFTQQGQGSSMN 599
Score = 26.3 bits (51), Expect(3) = 1e-073
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 1481 FIHSL*FTRTNMTLQVL 1431
F H L*FTRTN+T L
Sbjct: 726 FTHHL*FTRTNITFTSL 676
Score = 24.0 bits (46), Expect(3) = 3e-093
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNY 1467
NVMFVLVNY
Sbjct: 686 NVMFVLVNY 712
Score = 23.1 bits (44), Expect(5) = 5e-051
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -3
Query: 1479 YSLAIVHKNEHDV 1441
+S IVHKNEH V
Sbjct: 724 HSSPIVHKNEHYV 686
>gb|CN138545.1|CN138545 OX1_64_A03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_64_A03_A002 5', mRNA sequence
Length = 784
Score = 340 bits (737), Expect = 3e-092
Identities = 140/143 (97%), Positives = 141/143 (98%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 354 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 533
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS
Sbjct: 534 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 713
Query: 651 IGAVTMDPKRGPDVVVDESCWSD 719
GAVTMDP RGPDVVVDESCWSD
Sbjct: 714 TGAVTMDPSRGPDVVVDESCWSD 782
Score = 281 bits (608), Expect = 2e-074
Identities = 118/144 (81%), Positives = 121/144 (84%)
Frame = -2 / -1
Query: 721 RSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSV 542
RSLQHDSSTTTSGPRLGSMVTAP++DVNTTRRTVPASAAALITYSVPRTAGSTICSGSSV
Sbjct: 784 RSLQHDSSTTTSGPRLGSMVTAPVEDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSV 605
Query: 541 TGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPF 362
TGEAVWKTPWQPCT APSSALRCAFFGSSGFLTVP TVYPF
Sbjct: 604 TGEAVWKTPWQPCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTVYPF 425
Query: 361 SSSSFTNHEAMYPAAPVTHTVCPF 290
SSS T+HEAMYPAAPVTHTVCPF
Sbjct: 424 SSSILTSHEAMYPAAPVTHTVCPF 353
Score = 134 bits (287), Expect(2) = 1e-052
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 542 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 363
Query: 299 LPVP 288
LPVP
Sbjct: 362 LPVP 351
Score = 95.0 bits (201), Expect(2) = 1e-052
Identities = 37/41 (90%), Positives = 37/41 (90%)
Frame = -1 / -3
Query: 719 VAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
VAPARLVDHDVGPA GVHGH A G REHHPPHRAGLRRRVD
Sbjct: 782 VAPARLVDHDVGPAAGVHGHRAGGGREHHPPHRAGLRRRVD 660
Score = 94.1 bits (199), Expect(3) = 4e-026
Identities = 41/63 (65%), Positives = 41/63 (65%)
Frame = +1 / +1
Query: 289 GTGRPCA*PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARP 468
GTGRPCA PARPGTSPRG CCSRRDTL RAPSG A PSG*SSARP
Sbjct: 352 GTGRPCASPARPGTSPRGSSRCCSRRDTLSRAPSGTQMTRRTRTSRRWTARPSG*SSARP 531
Query: 469 ICW 477
W
Sbjct: 532 TSW 540
Score = 46.9 bits (96), Expect(3) = 4e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +1
Query: 628 GGWCSRRPSAP*PWTPSAGP 687
GGWCSR P A *PWTP+AGP
Sbjct: 691 GGWCSRPPPAR*PWTPAAGP 750
Score = 23.1 bits (44), Expect(3) = 4e-026
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 21 PSYQLDRRHH 50
PSYQLDR H
Sbjct: 4 PSYQLDRSSH 33
>gb|CN129279.1|CN129279 RHOH1_34_B10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_B10_A002 5', mRNA sequence
Length = 792
Score = 322 bits (697), Expect = 1e-086
Identities = 134/136 (98%), Positives = 135/136 (99%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 383 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 562
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS
Sbjct: 563 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 742
Query: 651 IGAVTMDPKRGPDVVV 698
IGAVTMDP RGPDVVV
Sbjct: 743 IGAVTMDPSRGPDVVV 790
Score = 266 bits (576), Expect = 5e-070
Identities = 112/137 (81%), Positives = 114/137 (83%)
Frame = -2 / -1
Query: 700 STTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWK 521
STTTSGPRLGSMVTAPM+DVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWK
Sbjct: 792 STTTSGPRLGSMVTAPMEDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWK 613
Query: 520 TPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTN 341
TPWQPCT APSSALRCAFFGSSGFLTVP TVYPFSSS T+
Sbjct: 612 TPWQPCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTVYPFSSSILTS 433
Query: 340 HEAMYPAAPVTHTVCPF 290
HEAMYPAAPVTHTVCPF
Sbjct: 432 HEAMYPAAPVTHTVCPF 382
Score = 134 bits (287), Expect(2) = 3e-049
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 571 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 392
Query: 299 LPVP 288
LPVP
Sbjct: 391 LPVP 380
Score = 94.1 bits (199), Expect(3) = 8e-027
Identities = 41/63 (65%), Positives = 41/63 (65%)
Frame = +1 / +3
Query: 289 GTGRPCA*PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARP 468
GTGRPCA PARPGTSPRG CCSRRDTL RAPSG A PSG*SSARP
Sbjct: 381 GTGRPCASPARPGTSPRGSSRCCSRRDTLSRAPSGTQMTRRTRTSRRWTARPSG*SSARP 560
Query: 469 ICW 477
W
Sbjct: 561 TSW 569
Score = 83.5 bits (176), Expect(2) = 3e-049
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = -1 / -3
Query: 698 DHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
DHDVGPA GVHGH ADG REHHPPHRAGLRRRVD
Sbjct: 790 DHDVGPAAGVHGHRADGGREHHPPHRAGLRRRVD 689
Score = 49.2 bits (101), Expect(3) = 8e-027
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 628 GGWCSRRPSAP*PWTPSAGP 687
GGWCSR PSA *PWTP+AGP
Sbjct: 720 GGWCSRPPSAR*PWTPAAGP 779
Score = 23.1 bits (44), Expect(3) = 8e-027
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 21 PSYQLDRRHH 50
PSYQLDR H
Sbjct: 34 PSYQLDRSSH 63
>gb|CD431095.1|CD431095 ETH1_6_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_A10_A002 5', mRNA sequence
Length = 681
Score = 319 bits (691), Expect = 7e-086
Identities = 125/158 (79%), Positives = 138/158 (87%)
Frame = +3 / +3
Query: 300 TVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLD 479
TVCVTGA GY+ SW+VKLLLE+GY V+GTVRNPDD KNAHL+AL GA ERL LCKADLLD
Sbjct: 207 TVCVTGAGGYVGSWIVKLLLERGYAVRGTVRNPDDAKNAHLRALPGATERLALCKADLLD 386
Query: 480 YDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGA 659
YD + A+ GC GVFHTASPVTDDPE+MVEPAV GT Y+I+AAAEAGTVRRVV TSSIGA
Sbjct: 387 YDTLRAAIAGCHGVFHTASPVTDDPEEMVEPAVTGTRYIIDAAAEAGTVRRVVLTSSIGA 566
Query: 660 VTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVA 773
V MDP R PD VVDESCWSDL+FC+KT+NWYCY KAVA
Sbjct: 567 VAMDPNRSPDAVVDESCWSDLDFCKKTKNWYCYXKAVA 680
Score = 229 bits (494), Expect = 1e-058
Identities = 104/158 (65%), Positives = 108/158 (68%)
Frame = -2 / -3
Query: 772 ATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAALIT 593
ATA *QYQFLVF Q SRSLQHDSSTT SG RLGSM TAPMD+V TTRRTVPASAAA +
Sbjct: 679 ATAFX*QYQFLVFLQKSRSLQHDSSTTASGERLGSMATAPMDEVRTTRRTVPASAAASMM 500
Query: 592 YSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCA 413
VP TAGSTI SGSSVTG+AVWKTPWQP AP SALRCA
Sbjct: 499 *RVPVTAGSTISSGSSVTGDAVWKTPWQPAMAARSVS*SSRSALHSASLSVAPGSALRCA 320
Query: 412 FFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTV 299
FF SSG TVP T YP SS S T H+ P APVTHTV
Sbjct: 319 FFASSGLRTVPLTAYPLSSRSLTIHDPT*PPAPVTHTV 206
Score = 72.5 bits (152), Expect(2) = 9e-025
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
V+QIGLA+ QPL A +R +VRVLRV+ V GA V LEQ+L PR DV AGHAH
Sbjct: 386 VEQIGLAQRQPLRRAGKRPQVRVLRVVGVAHGASDGVPPLEQELDDPRPDVAAGAGHAHR 207
Query: 299 LPVPRRYR 276
+P R
Sbjct: 206 RRLPASRR 183
Score = 63.4 bits (132), Expect(2) = 9e-025
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -1 / -2
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
G LAE+EVAPARLVD V A+G+HG ADGR + RAGL R VD
Sbjct: 647 GLLAEVEVAPARLVDDGVRRAVGIHGDRADGRGQDDAADRAGLGRGVD 504
>gb|CN137521.1|CN137521 OX1_57_G07.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_G07_A002 5', mRNA sequence
Length = 775
Score = 318 bits (689), Expect = 1e-085
Identities = 132/134 (98%), Positives = 133/134 (99%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 374 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 553
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 650
LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS
Sbjct: 554 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSS 733
Query: 651 IGAVTMDPKRGPDV 692
IGAVTMDP RGPDV
Sbjct: 734 IGAVTMDPSRGPDV 775
Score = 260 bits (562), Expect = 4e-068
Identities = 109/134 (81%), Positives = 111/134 (82%)
Frame = -2 / -2
Query: 691 TSGPRLGSMVTAPMDDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPW 512
TSGPRLGSMVTAPM+DVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPW
Sbjct: 774 TSGPRLGSMVTAPMEDVNTTRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPW 595
Query: 511 QPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEA 332
QPCT APSSALRCAFFGSSGFLTVP TVYPFSSS T+HEA
Sbjct: 594 QPCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTVYPFSSSILTSHEA 415
Query: 331 MYPAAPVTHTVCPF 290
MYPAAPVTHTVCPF
Sbjct: 414 MYPAAPVTHTVCPF 373
Score = 134 bits (287), Expect(2) = 3e-047
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 562 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 383
Query: 299 LPVP 288
LPVP
Sbjct: 382 LPVP 371
Score = 94.1 bits (199), Expect(3) = 8e-027
Identities = 41/63 (65%), Positives = 41/63 (65%)
Frame = +1 / +3
Query: 289 GTGRPCA*PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARP 468
GTGRPCA PARPGTSPRG CCSRRDTL RAPSG A PSG*SSARP
Sbjct: 372 GTGRPCASPARPGTSPRGSSRCCSRRDTLSRAPSGTQMTRRTRTSRRWTARPSG*SSARP 551
Query: 469 ICW 477
W
Sbjct: 552 TSW 560
Score = 77.1 bits (162), Expect(2) = 3e-047
Identities = 29/32 (90%), Positives = 29/32 (90%)
Frame = -1 / -1
Query: 692 DVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
DVGPA GVHGH ADG REHHPPHRAGLRRRVD
Sbjct: 775 DVGPAAGVHGHRADGGREHHPPHRAGLRRRVD 680
Score = 49.2 bits (101), Expect(3) = 8e-027
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 628 GGWCSRRPSAP*PWTPSAGP 687
GGWCSR PSA *PWTP+AGP
Sbjct: 711 GGWCSRPPSAR*PWTPAAGP 770
Score = 23.1 bits (44), Expect(3) = 8e-027
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 21 PSYQLDRRHH 50
PSYQLDR H
Sbjct: 28 PSYQLDRSSH 57
>gb|BG051912.1|BG051912 RHIZ2_6_E04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 555
Score = 268 bits (579), Expect(3) = 2e-077
Identities = 114/137 (83%), Positives = 120/137 (87%)
Frame = +3 / +2
Query: 942 YVDVRDVADAHLRVFESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPR 1121
YVDVRDVADAHLRVFESP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEVNPR
Sbjct: 2 YVDVRDVADAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPR 181
Query: 1122 KQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTAEMQ 1301
KQ YKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ AE+Q
Sbjct: 182 KQAYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAAEVQ 361
Query: 1302 QGGIAIRA*EGDATHEH 1352
QGGIAIRA* H H
Sbjct: 362 QGGIAIRA*ARGRCHVH 412
Score = 194 bits (419), Expect(3) = 9e-055
Identities = 85/140 (60%), Positives = 89/140 (63%)
Frame = -2 / -1
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 420 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 241
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN PRSRSFW ENLY CFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 240 GRNSRPRSRSFWFENLYACFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 61
Query: 1000 ARGLSKTRRCASATSRTSTY 941
A GLSKTRRCASATSRTSTY
Sbjct: 60 AAGLSKTRRCASATSRTSTY 1
Score = 143 bits (307), Expect(4) = 4e-045
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -3
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 307 SEHRQVALLLKVLHRIVERLAHRPELQAQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 128
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 127 LGEDADDVLAVEDALGAEVSAGRGGALEDAE 35
Score = 41.4 bits (84), Expect(4) = 4e-045
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 389 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 294
Score = 37.7 bits (76), Expect(3) = 9e-055
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2 / -1
Query: 1420 LSARTNTGLFTQQVQGSSMN 1361
+S RTNT LFT+Q QGSSMN
Sbjct: 495 ISQRTNTSLFTEQEQGSSMN 436
Score = 36.3 bits (73), Expect(3) = 2e-077
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1 / +3
Query: 1363 SYCCPAPAV*TGLCLF 1410
SYCCPAPA+*T CLF
Sbjct: 438 SYCCPAPAL*TN*CLF 485
Score = 32.7 bits (65), Expect(4) = 4e-045
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 1409 NKHRPVYTAGAGQQYEHCFVF 1347
NKH VY AGAGQQYE +F
Sbjct: 484 NKH*FVYRAGAGQQYE*TLLF 422
Score = 26.7 bits (52), Expect(3) = 2e-077
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 520 NVMFVLVNYSD 552
Score = 22.6 bits (43), Expect(4) = 4e-045
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 551 SL*FTRTNITFTSL 510
Score = 22.6 bits (43), Expect(3) = 9e-055
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 552 ITIVHKNEHYV 520
>gb|BE360762.1|BE360762 DG1_66_C04.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 277 bits (600), Expect(2) = 1e-076
Identities = 118/140 (84%), Positives = 124/140 (88%)
Frame = +3 / +1
Query: 933 VQAYVDVRDVADAHLRVFESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEV 1112
VQAYVDVRDVADAHLRVFESP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEV
Sbjct: 1 VQAYVDVRDVADAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEV 180
Query: 1113 NPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTA 1292
NPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ A
Sbjct: 181 NPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAA 360
Query: 1293 EMQQGGIAIRA*EGDATHEH 1352
E+QQGGIAIRA* H H
Sbjct: 361 EVQQGGIAIRA*ARGRCHVH 420
Score = 204 bits (440), Expect(2) = 3e-054
Identities = 88/142 (61%), Positives = 93/142 (65%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 428 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 249
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 248 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 69
Query: 1000 ARGLSKTRRCASATSRTSTYAC 935
A GLSKTRRCASATSRTSTYAC
Sbjct: 68 AAGLSKTRRCASATSRTSTYAC 3
Score = 141 bits (303), Expect(3) = 2e-041
Identities = 64/91 (70%), Positives = 71/91 (78%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 315 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 136
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L A+V+AGR GALEDAE
Sbjct: 135 LGEDADDVLAVEDALGAKVSAGRGGALEDAE 43
Score = 41.4 bits (84), Expect(3) = 2e-041
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 397 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 302
Score = 31.8 bits (63), Expect(2) = 1e-076
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 445 FILLPCPCCVNK 480
Score = 30.4 bits (60), Expect(2) = 3e-054
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 477 VYTAGAGQQYE*TLLF 430
Score = 27.2 bits (53), Expect(3) = 2e-041
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 485 SSLFTQQGQGSSMN 444
>gb|AW678856.1|AW678856 WS1_1_A12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 565
Score = 257 bits (555), Expect(3) = 9e-073
Identities = 109/131 (83%), Positives = 115/131 (87%)
Frame = +3 / +1
Query: 960 VADAHLRVFESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKF 1139
VADAHLRVFESP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEVNPRKQPYKF
Sbjct: 1 VADAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKF 180
Query: 1140 SNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAI 1319
SNQKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ AE+QQGGIAI
Sbjct: 181 SNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAI 360
Query: 1320 RA*EGDATHEH 1352
RA* H H
Sbjct: 361 RA*ARGRCHVH 393
Score = 182 bits (392), Expect(3) = 6e-049
Identities = 79/133 (59%), Positives = 84/133 (63%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 401 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 222
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 221 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 42
Query: 1000 ARGLSKTRRCASA 962
A GLSKTRRCASA
Sbjct: 41 AAGLSKTRRCASA 3
Score = 143 bits (307), Expect(4) = 2e-043
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 288 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 109
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALEDAE 975
L AEV+AGR GALEDAE
Sbjct: 108 LGEDADDVLAVEDALGAEVSAGRGGALEDAE 16
Score = 41.4 bits (84), Expect(4) = 2e-043
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 370 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 275
Score = 31.8 bits (63), Expect(3) = 9e-073
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 418 FILLPCPCCVNK 453
Score = 30.4 bits (60), Expect(3) = 6e-049
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 450 VYTAGAGQQYE*TLLF 403
Score = 27.2 bits (53), Expect(4) = 2e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 458 SSLFTQQGQGSSMN 417
Score = 26.7 bits (52), Expect(3) = 9e-073
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 504 NVMFVLVNYSD 536
Score = 22.6 bits (43), Expect(4) = 2e-043
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 535 SL*FTRTNITFTSL 494
Score = 22.6 bits (43), Expect(3) = 6e-049
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 536 ITIVHKNEHYV 504
>gb|CX608225.1|CX608225 ANR1_37_H09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_H09_A002 3', mRNA sequence
Length = 560
Score = 253 bits (547), Expect(3) = 1e-071
Identities = 107/129 (82%), Positives = 113/129 (87%)
Frame = +3 / +3
Query: 966 DAHLRVFESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSN 1145
DAHLRVFESP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSN
Sbjct: 3 DAHLRVFESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSN 182
Query: 1146 QKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA 1325
QKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ AE+QQGGIAIRA
Sbjct: 183 QKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA 362
Query: 1326 *EGDATHEH 1352
* H H
Sbjct: 363 *ARGRCHVH 389
Score = 180 bits (388), Expect(3) = 2e-048
Identities = 78/132 (59%), Positives = 83/132 (62%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 397 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 218
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 217 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAHRYRPD 38
Query: 1000 ARGLSKTRRCAS 965
A GLSKTRRCAS
Sbjct: 37 AAGLSKTRRCAS 2
Score = 122 bits (260), Expect(5) = 4e-040
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 284 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 105
Query: 1067 L 1065
L
Sbjct: 104 L 102
Score = 41.4 bits (84), Expect(5) = 4e-040
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 366 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 271
Score = 31.8 bits (63), Expect(3) = 1e-071
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 414 FILLPCPCCVNK 449
Score = 30.4 bits (60), Expect(3) = 2e-048
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 446 VYTAGAGQQYE*TLLF 399
Score = 27.6 bits (54), Expect(5) = 4e-040
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -1
Query: 1013 VAAGRAGALEDAE 975
V+AGR GALEDAE
Sbjct: 50 VSAGRGGALEDAE 12
Score = 27.2 bits (53), Expect(5) = 4e-040
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 454 SSLFTQQGQGSSMN 413
Score = 26.7 bits (52), Expect(3) = 1e-071
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 500 NVMFVLVNYSD 532
Score = 22.6 bits (43), Expect(5) = 4e-040
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 531 SL*FTRTNITFTSL 490
Score = 22.6 bits (43), Expect(3) = 2e-048
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 532 ITIVHKNEHYV 500
>gb|CW346174.1|CW346174 104_849_11488883_148_36218_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488883, DNA
sequence
Length = 735
Score = 127 bits (272), Expect(4) = 3e-070
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +3 / +3
Query: 555 EQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCE 734
E+MVEPAV GT Y+I+AAAEAGTVRRVV TSSIGAV MDP R PD VVDESCWSDL+FC+
Sbjct: 39 EEMVEPAVTGTRYIIDAAAEAGTVRRVVLTSSIGAVAMDPNRSPDAVVDESCWSDLDFCK 218
Query: 735 KTRNWYCY 758
KT+ Y +
Sbjct: 219 KTKVQYSH 242
Score = 109 bits (233), Expect(2) = 9e-036
Identities = 51/88 (57%), Positives = 51/88 (57%)
Frame = -2 / -3
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P A G SKTR CASA SRT TYACTALA V AEP RYL C LAFT C
Sbjct: 577 PAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGPCTSTGF 398
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQF 743
A SHAACSATA P*QYQF
Sbjct: 397 TTTRSTPRAAASSHAACSATAFP*QYQF 314
Score = 107 bits (229), Expect(2) = 1e-025
Identities = 55/83 (66%), Positives = 58/83 (69%)
Frame = -2 / -3
Query: 787 HAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASA 608
HA T * Y LVF Q SRSLQHDSSTT SG RLGSM TAPMD+V TTRRTVPASA
Sbjct: 271 HAWRE*TRSR*LYCTLVFLQKSRSLQHDSSTTASGERLGSMATAPMDEVRTTRRTVPASA 92
Query: 607 AALITYSVPRTAGSTICSGSSVT 539
AA + VP TAGSTI S +T
Sbjct: 91 AASMM*RVPVTAGSTISSCKFLT 23
Score = 102 bits (218), Expect(4) = 3e-070
Identities = 39/56 (69%), Positives = 51/56 (91%)
Frame = +3 / +3
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAE 1025
Q +VNAS+ H+LKYL+GSA+T+ANAVQAYV VRD ADAH+RVFE+P A+GR++CA+
Sbjct: 429 QPSVNASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICAD 596
Score = 63.4 bits (132), Expect(2) = 9e-036
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -1 / -2
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPHRAGLRRRVD 597
G LAE+EVAPARLVD V A+G+HG ADGR + RAGL R VD
Sbjct: 224 GLLAEVEVAPARLVDDGVRRAVGIHGDRADGRGQDDAADRAGLGRGVD 81
Score = 48.3 bits (99), Expect(4) = 3e-070
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 741 RNWYCYGKAVAEHAAWETARRR 806
+NWYCYGKAVAE AAWE A R
Sbjct: 312 QNWYCYGKAVAEQAAWEEAAAR 377
Score = 46.9 bits (96), Expect(4) = 3e-070
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 1029 VLHREDVVRILAKLFPEYPVPAR 1097
VLHREDVVR L K FP+YPVP R
Sbjct: 603 VLHREDVVRTLRKFFPDYPVPER 671
Score = 34.5 bits (69), Expect(2) = 1e-025
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 914 GRAVQVLEDVRDAGVHRRL 858
G AVQVLE V AGVHRRL
Sbjct: 485 GGAVQVLEHVHQAGVHRRL 429
>gb|CN137640.1|CN137640 OX1_58_D03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_58_D03_A002 5', mRNA sequence
Length = 697
Score = 259 bits (559), Expect = 1e-067
Identities = 106/107 (99%), Positives = 107/107 (100%)
Frame = +3 / +2
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 377 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 556
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAA 611
LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAA
Sbjct: 557 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAA 697
Score = 199 bits (429), Expect = 9e-050
Identities = 83/107 (77%), Positives = 84/107 (78%)
Frame = -2 / -2
Query: 610 AAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPS 431
AAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCT APS
Sbjct: 696 AAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTARQMAS*SRRSALQRISRSAAPS 517
Query: 430 SALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
SALRCAFFGSSGFLTVP TVYPFSSS T+HEAMYPAAPVTHTVCPF
Sbjct: 516 SALRCAFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPF 376
Score = 134 bits (287), Expect = 4e-030
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 565 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 386
Query: 299 LPVP 288
LPVP
Sbjct: 385 LPVP 374
>gb|CN137446.1|CN137446 OX1_57_G07.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_G07_A002 3', mRNA sequence
Length = 532
Score = 239 bits (516), Expect(3) = 2e-067
Identities = 101/123 (82%), Positives = 107/123 (86%)
Frame = +3 / +1
Query: 984 FESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDL 1163
FESP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDL
Sbjct: 1 FESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDL 180
Query: 1164 GLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDAT 1343
GL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ AE+QQGGIAIRA*
Sbjct: 181 GLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRC 360
Query: 1344 HEH 1352
H H
Sbjct: 361 HVH 369
Score = 163 bits (351), Expect(3) = 2e-043
Identities = 71/125 (56%), Positives = 76/125 (60%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 377 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 198
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 197 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAHRYRPD 18
Query: 1000 ARGLS 986
A GLS
Sbjct: 17 AAGLS 3
Score = 135 bits (289), Expect(4) = 5e-041
Identities = 61/88 (69%), Positives = 68/88 (77%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 264 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 85
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGALE 984
L A+V+AGR GALE
Sbjct: 84 LGEDADDVLAVEDALGAQVSAGRGGALE 1
Score = 41.4 bits (84), Expect(4) = 5e-041
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 346 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 251
Score = 31.8 bits (63), Expect(3) = 2e-067
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 394 FILLPCPCCVNK 429
Score = 30.4 bits (60), Expect(3) = 2e-043
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 426 VYTAGAGQQYE*TLLF 379
Score = 27.2 bits (53), Expect(4) = 5e-041
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 434 SSLFTQQGQGSSMN 393
Score = 26.7 bits (52), Expect(3) = 2e-067
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 480 NVMFVLVNYSD 512
Score = 22.6 bits (43), Expect(4) = 5e-041
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 511 SL*FTRTNITFTSL 470
Score = 22.6 bits (43), Expect(3) = 2e-043
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 512 ITIVHKNEHYV 480
>gb|BM318321.1|BM318321 PI1_77_C02.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 514
Score = 239 bits (516), Expect(3) = 1e-066
Identities = 101/123 (82%), Positives = 107/123 (86%)
Frame = +3 / +1
Query: 984 FESPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDL 1163
FESP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDL
Sbjct: 1 FESPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDL 180
Query: 1164 GLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDAT 1343
GL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ AE+QQGGIAIRA*
Sbjct: 181 GLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRC 360
Query: 1344 HEH 1352
H H
Sbjct: 361 HVH 369
Score = 163 bits (351), Expect(2) = 4e-042
Identities = 72/125 (57%), Positives = 77/125 (61%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 377 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 198
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 197 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAXRYRPD 18
Query: 1000 ARGLS 986
A GLS
Sbjct: 17 AAGLS 3
Score = 122 bits (260), Expect(3) = 1e-035
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 264 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 85
Query: 1067 L 1065
L
Sbjct: 84 L 82
Score = 41.4 bits (84), Expect(3) = 1e-035
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 346 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 251
Score = 31.8 bits (63), Expect(3) = 1e-066
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 394 FILLPCPCCVNK 429
Score = 30.4 bits (60), Expect(2) = 4e-042
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 426 VYTAGAGQQYE*TLLF 379
Score = 27.2 bits (53), Expect(3) = 1e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 434 SSLFTQQGQGSSMN 393
Score = 24.0 bits (46), Expect(3) = 1e-066
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYS 1470
NVMFV VNYS
Sbjct: 480 NVMFVFVNYS 509
>gb|CX610621.1|CX610621 ANR1_19_G06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_19_G06_A002 5', mRNA sequence
Length = 694
Score = 253 bits (547), Expect = 5e-066
Identities = 103/104 (99%), Positives = 104/104 (100%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 381 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 560
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVIN 602
LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVIN
Sbjct: 561 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVIN 692
Score = 195 bits (421), Expect = 1e-048
Identities = 81/105 (77%), Positives = 82/105 (78%)
Frame = -2 / -1
Query: 604 ALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSA 425
ALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCT APSSA
Sbjct: 694 ALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTARQMAS*SRRSALQRISRSAAPSSA 515
Query: 424 LRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
LRCAFFGSSGFLTVP TVYPFSSS T+HEAMYPAAPVTHTVCPF
Sbjct: 514 LRCAFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPF 380
Score = 134 bits (287), Expect = 4e-030
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -3
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 569 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 390
Query: 299 LPVP 288
LPVP
Sbjct: 389 LPVP 378
>gb|CD228671.1|CD228671 CCC1_9_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_E11_A007 3', mRNA sequence
Length = 535
Score = 234 bits (505), Expect(3) = 6e-066
Identities = 99/121 (81%), Positives = 105/121 (86%)
Frame = +3 / +3
Query: 990 SPRASGRHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGL 1169
SP ASGR+LCAERVLHREDVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL
Sbjct: 3 SPAASGRYLCAERVLHREDVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGL 182
Query: 1170 QFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHE 1349
+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H
Sbjct: 183 EFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHV 362
Query: 1350 H 1352
H
Sbjct: 363 H 365
Score = 161 bits (347), Expect(3) = 8e-043
Identities = 70/124 (56%), Positives = 75/124 (60%)
Frame = -2 / -1
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 373 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 194
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSLXXXXXXXXXXXXXXXXXXRPD 1001
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL RPD
Sbjct: 193 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSLARMRTTSSRWRTRSAQRYRPD 14
Query: 1000 ARGL 989
A GL
Sbjct: 13 AAGL 2
Score = 132 bits (283), Expect(4) = 3e-040
Identities = 60/86 (69%), Positives = 66/86 (76%)
Frame = -1 / -3
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 260 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 81
Query: 1067 LXXXXXXXXXXXXXXXAEVAAGRAGA 990
L AEV+AGR GA
Sbjct: 80 LGEDADDVLAVEDALGAEVSAGRGGA 3
Score = 41.4 bits (84), Expect(4) = 3e-040
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 342 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 247
Score = 31.8 bits (63), Expect(3) = 6e-066
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 390 FILLPCPCCVNK 425
Score = 30.4 bits (60), Expect(3) = 8e-043
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 422 VYTAGAGQQYE*TLLF 375
Score = 27.2 bits (53), Expect(4) = 3e-040
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 430 SSLFTQQGQGSSMN 389
Score = 26.7 bits (52), Expect(3) = 6e-066
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 476 NVMFVLVNYSD 508
Score = 22.6 bits (43), Expect(4) = 3e-040
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 507 SL*FTRTNITFTSL 466
Score = 22.6 bits (43), Expect(3) = 8e-043
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 508 ITIVHKNEHYV 476
>gb|CD231600.1|CD231600 SS1_22_F09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_F09_A012 5', mRNA sequence
Length = 697
Score = 251 bits (543), Expect = 2e-065
Identities = 102/104 (98%), Positives = 104/104 (100%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 385 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 564
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVIN 602
LLDYDAICRAVQGCQGVFHTASPVTDDPEQ+VEPAVRGTEYVIN
Sbjct: 565 LLDYDAICRAVQGCQGVFHTASPVTDDPEQVVEPAVRGTEYVIN 696
Score = 191 bits (412), Expect = 2e-047
Identities = 79/104 (75%), Positives = 80/104 (76%)
Frame = -2 / -3
Query: 601 LITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSAL 422
LITYSVPRTAGST CSGSSVTGEAVWKTPWQPCT APSSAL
Sbjct: 695 LITYSVPRTAGSTTCSGSSVTGEAVWKTPWQPCTARQMAS*SRRSALQRISRSAAPSSAL 516
Query: 421 RCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
RCAFFGSSGFLTVP TVYPFSSS T+HEAMYPAAPVTHTVCPF
Sbjct: 515 RCAFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPF 384
Score = 132 bits (283), Expect = 1e-029
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSL EQ L +PRGDVPGRAG AHG
Sbjct: 573 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLFEQHLDEPRGDVPGRAGDAHG 394
Query: 299 LPVP 288
LPVP
Sbjct: 393 LPVP 382
>gb|CN137561.1|CN137561 OX1_58_D03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_58_D03_A002 3', mRNA sequence
Length = 483
Score = 204 bits (439), Expect(3) = 6e-057
Identities = 86/107 (80%), Positives = 91/107 (85%)
Frame = +3 / +1
Query: 1032 LHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVK 1211
LHREDVVRILAK FPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVK
Sbjct: 1 LHREDVVRILAKFFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVK 180
Query: 1212 NLQEKGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
NLQEKGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 181 NLQEKGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 321
Score = 154 bits (330), Expect(3) = 2e-040
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 329 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 150
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGK+L
Sbjct: 149 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKNL 33
Score = 123 bits (264), Expect(3) = 2e-029
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+VKRLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 216 SEHRQVALLLKVLHRIVKRLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 37
Query: 1067 L 1065
L
Sbjct: 36 L 34
Score = 31.8 bits (63), Expect(3) = 6e-057
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 346 FILLPCPCCVNK 381
Score = 30.4 bits (60), Expect(3) = 2e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 378 VYTAGAGQQYE*TLLF 331
Score = 27.2 bits (53), Expect(3) = 2e-029
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 386 SSLFTQQGQGSSMN 345
Score = 26.7 bits (52), Expect(3) = 6e-057
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 432 NVMFVLVNYSD 464
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 463 SL*FTRTNITFTSL 422
Score = 22.6 bits (43), Expect(3) = 2e-040
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 464 ITIVHKNEHYV 432
>gb|CX608316.1|CX608316 ANR1_37_H09.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_37_H09_A002 5', mRNA sequence
Length = 535
Score = 222 bits (480), Expect = 9e-057
Identities = 90/93 (96%), Positives = 91/93 (97%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHL ALDGAAERLILCK D
Sbjct: 256 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLMALDGAAERLILCKTD 435
Query: 471 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVE 569
LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVE
Sbjct: 436 LLDYDAICRAVQGCQGVFHTASPVTDDPEQMVE 534
Score = 167 bits (359), Expect = 4e-040
Identities = 68/93 (73%), Positives = 70/93 (75%)
Frame = -2 / -3
Query: 568 STICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFL 389
STICSGSSVTGEAVWKTPWQPCT APSSA+RCAFFGSSGFL
Sbjct: 533 STICSGSSVTGEAVWKTPWQPCTARQMAS*SRRSVLQRISRSAAPSSAMRCAFFGSSGFL 354
Query: 388 TVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
TVP TVYPFSSS T+HEAMYPAAPVTHTVCPF
Sbjct: 353 TVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPF 255
Score = 131 bits (280), Expect = 3e-029
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQR EVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 444 VQEVGLAEDQPLGRAVQRHEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 265
Query: 299 LPVP 288
LPVP
Sbjct: 264 LPVP 253
>gb|CX608520.1|CX608520 ANR1_39_C06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_39_C06_A002 3', mRNA sequence
Length = 491
Score = 195 bits (421), Expect(3) = 2e-054
Identities = 83/103 (80%), Positives = 88/103 (85%)
Frame = +3 / +3
Query: 1044 DVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQE 1223
DVVRILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQE
Sbjct: 3 DVVRILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQE 182
Query: 1224 KGHLPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
KGHLPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 183 KGHLPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 311
Score = 155 bits (333), Expect(3) = 6e-041
Identities = 64/99 (64%), Positives = 69/99 (69%)
Frame = -2 / -2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 319 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 140
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL
Sbjct: 139 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSL 23
Score = 122 bits (260), Expect(4) = 4e-037
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = -1 / -1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 206 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 27
Query: 1067 L 1065
L
Sbjct: 26 L 24
Score = 41.4 bits (84), Expect(4) = 4e-037
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 288 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 193
Score = 31.8 bits (63), Expect(3) = 2e-054
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 336 FILLPCPCCVNK 371
Score = 30.4 bits (60), Expect(3) = 6e-041
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 368 VYTAGAGQQYE*TLLF 321
Score = 27.2 bits (53), Expect(4) = 4e-037
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 376 SSLFTQQGQGSSMN 335
Score = 26.7 bits (52), Expect(3) = 2e-054
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 422 NVMFVLVNYSD 454
Score = 22.6 bits (43), Expect(4) = 4e-037
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 453 SL*FTRTNITFTSL 412
Score = 22.6 bits (43), Expect(3) = 6e-041
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -2
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 454 ITIVHKNEHYV 422
>gb|CN125480.1|CN125480 RHOH1_11_G11.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_11_G11_A002 3', mRNA sequence
Length = 474
Score = 193 bits (415), Expect(3) = 1e-053
Identities = 81/100 (81%), Positives = 86/100 (86%)
Frame = +3 / +3
Query: 1053 RILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGH 1232
RILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGH
Sbjct: 3 RILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGH 182
Query: 1233 LPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
LPVLGE+TT ++ P AE+QQGGIAIRA* H H
Sbjct: 183 LPVLGEQTTEADKEEANPAAEVQQGGIAIRA*ARGRCHVH 302
Score = 155 bits (332), Expect(3) = 8e-041
Identities = 64/99 (64%), Positives = 69/99 (69%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 310 VFMCTWHLPLAHARMAIPPCCTSAAGLASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 131
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL
Sbjct: 130 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSL 14
Score = 120 bits (257), Expect(3) = 1e-028
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
S+HRQV+LLL+VLHR+VKRLA RPELQ QVPELLV ELVRLLPR+HLVG PG DGVLGEE
Sbjct: 197 SQHRQVALLLKVLHRIVKRLAHRPELQSQVPELLVRELVRLLPRVHLVGTPGGDGVLGEE 18
Query: 1067 L 1065
L
Sbjct: 17 L 15
Score = 31.8 bits (63), Expect(3) = 1e-053
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 327 FILLPCPCCVNK 362
Score = 30.4 bits (60), Expect(3) = 8e-041
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 359 VYTAGAGQQYE*TLLF 312
Score = 26.7 bits (52), Expect(3) = 1e-053
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 413 NVMFVLVNYSD 445
Score = 23.5 bits (45), Expect(3) = 1e-028
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 1395 CLHSRCRAAV* 1363
CLHSR RAAV*
Sbjct: 360 CLHSRGRAAV* 328
Score = 22.6 bits (43), Expect(3) = 1e-028
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 444 SL*FTRTNITFTSL 403
Score = 22.6 bits (43), Expect(3) = 8e-041
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 445 ITIVHKNEHYV 413
>gb|CB927052.1|CB927052 ABA1_13_F08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_13_F08_A012 3', mRNA sequence
Length = 472
Score = 189 bits (407), Expect(3) = 1e-052
Identities = 80/100 (80%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 1053 RILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGH 1232
RILAKLFPEYPVP RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGH
Sbjct: 3 RILAKLFPEYPVPTRCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGH 182
Query: 1233 LPVLGERTTTEAADKDAPTAEMQQGGIAIRA*EGDATHEH 1352
LPVLGE+TT ++ AE+QQGGIAIRA* H H
Sbjct: 183 LPVLGEQTTEADKEEANAAAEVQQGGIAIRA*ARGRCHVH 302
Score = 155 bits (333), Expect(3) = 6e-041
Identities = 64/99 (64%), Positives = 69/99 (69%)
Frame = -2 / -1
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 310 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 131
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKSL 1064
GRN +PRSRSFW ENLYGCFRGFTSSEHL GTGYSGKSL
Sbjct: 130 GRNSNPRSRSFWFENLYGCFRGFTSSEHLVGTGYSGKSL 14
Score = 122 bits (260), Expect(4) = 4e-037
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = -1 / -3
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAPGWDGVLGEE 1068
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAPG DGVLGEE
Sbjct: 197 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAPGGDGVLGEE 18
Query: 1067 L 1065
L
Sbjct: 17 L 15
Score = 41.4 bits (84), Expect(4) = 4e-037
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -2
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 279 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 184
Score = 31.8 bits (63), Expect(3) = 1e-052
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 327 FILLPCPCCVNK 362
Score = 30.4 bits (60), Expect(3) = 6e-041
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 359 VYTAGAGQQYE*TLLF 312
Score = 27.2 bits (53), Expect(4) = 4e-037
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 367 SSLFTQQGQGSSMN 326
Score = 26.7 bits (52), Expect(3) = 1e-052
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 413 NVMFVLVNYSD 445
Score = 22.6 bits (43), Expect(4) = 4e-037
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 444 SL*FTRTNITFTSL 403
Score = 22.6 bits (43), Expect(3) = 6e-041
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 445 ITIVHKNEHYV 413
>gb|CF429087.1|CF429087 PH1_19_G12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_19_G12_A002 5', mRNA sequence
Length = 721
Score = 204 bits (440), Expect = 3e-051
Identities = 82/118 (69%), Positives = 98/118 (83%)
Frame = +3 / +2
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADL 473
G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDGAA+RL+L +ADL
Sbjct: 254 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADL 433
Query: 474 LDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 647
LD +++ A GC GVFH ASPVTDDPE M+EPA+RGT+YV+ AAA+ G R V +S
Sbjct: 434 LDPESLVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTSS 607
Score = 137 bits (293), Expect = 5e-031
Identities = 65/114 (57%), Positives = 69/114 (60%)
Frame = -2 / -2
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R P SAAA+ITY VPR AGS I SGSSVTGEA WKTP QP
Sbjct: 594 TTRLTPVSAAAVITYCVPRIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRR 415
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
APS ALR +FFGS+GFLTVP TV PFS T+ EAM P APVT TV P
Sbjct: 414 TRRSAAPSRALRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 253
Score = 86.3 bits (182), Expect(2) = 2e-021
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = +3 / +2
Query: 597 INAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGK 764
+ AA V+RVVFTSSIG V ++P R P+ VD++CWSDLE+C+ T+NWYCY K
Sbjct: 554 VMTAAADTGVKRVVFTSSIGTVYVNPYREPNKPVDDTCWSDLEYCKNTQNWYCYAK 721
Score = 63.8 bits (133), Expect(2) = 1e-021
Identities = 32/55 (58%), Positives = 36/55 (65%)
Frame = -2 / -2
Query: 763 LP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAAL 599
L *QYQF VF Q SRSLQ SST G R G T PM+DVNTTR T ++AA +
Sbjct: 720 LA*QYQFCVFLQYSRSLQQVSSTGLLGSR*GFTYTVPMEDVNTTRLTPVSAAAVI 556
Score = 61.6 bits (128), Expect(2) = 1e-021
Identities = 29/64 (45%), Positives = 41/64 (64%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
+QQIG ED+ +GGAV+ +V VL + VPD A V+LLE+ L +P GD P +G A+
Sbjct: 439 IQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLLEEALDKPGGDEPSSSGDANC 260
Query: 299 LPVP 288
+P
Sbjct: 259 PALP 248
Score = 38.2 bits (77), Expect(2) = 2e-021
Identities = 22/55 (40%), Positives = 23/55 (41%)
Frame = +1 / +3
Query: 313 PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARPICW 477
P G+SP G S SRR T A SG APP SS PICW
Sbjct: 273 PELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICW 437
>gb|CF432928.1|CF432928 NIT1_19_B11.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_19_B11_A002 5', mRNA sequence
Length = 700
Score = 204 bits (440), Expect = 3e-051
Identities = 82/118 (69%), Positives = 98/118 (83%)
Frame = +3 / +2
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADL 473
G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDGAA+RL+L +ADL
Sbjct: 257 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADL 436
Query: 474 LDYDAICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 647
LD +++ A GC GVFH ASPVTDDPE M+EPA+RGT+YV+ AAA+ G R V +S
Sbjct: 437 LDPESLVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTSS 610
Score = 137 bits (293), Expect = 5e-031
Identities = 65/114 (57%), Positives = 69/114 (60%)
Frame = -2 / -2
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R P SAAA+ITY VPR AGS I SGSSVTGEA WKTP QP
Sbjct: 597 TTRLTPVSAAAVITYCVPRIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRR 418
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCP 293
APS ALR +FFGS+GFLTVP TV PFS T+ EAM P APVT TV P
Sbjct: 417 TRRSAAPSRALRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 256
>gb|CW480229.1|CW480229 fsbb001f239d02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239d02, DNA
sequence
Length = 573
Score = 109 bits (233), Expect(2) = 6e-030
Identities = 51/88 (57%), Positives = 51/88 (57%)
Frame = -2 / -3
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P A G SKTR CASA SRT TYACTALA V AEP RYL C LAFT C
Sbjct: 433 PAACGASKTRTCASAASRTCTYACTALAYVLAEPFRYLSTCIRLAFTDGCSAGPCTSTGF 254
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQF 743
A SHAACSATA P*QYQF
Sbjct: 253 TTTRSTPRAAASSHAACSATAFP*QYQF 170
Score = 102 bits (218), Expect(4) = 2e-050
Identities = 39/56 (69%), Positives = 51/56 (91%)
Frame = +3 / +3
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAE 1025
Q +VNAS+ H+LKYL+GSA+T+ANAVQAYV VRD ADAH+RVFE+P A+GR++CA+
Sbjct: 285 QPSVNASLMHVLKYLNGSAKTYANAVQAYVHVRDAADAHVRVFEAPHAAGRYICAD 452
Score = 60.6 bits (126), Expect(4) = 2e-050
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 666 MDPKRGPDVVVDESCWSDLEFCEKTRNWYCY 758
MDP R PD VVDESCWSDL+FC+KT+ Y +
Sbjct: 6 MDPNRSPDAVVDESCWSDLDFCKKTKVQYSH 98
Score = 48.3 bits (99), Expect(4) = 2e-050
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 741 RNWYCYGKAVAEHAAWETARRR 806
+NWYCYGKAVAE AAWE A R
Sbjct: 168 QNWYCYGKAVAEQAAWEEAAAR 233
Score = 46.9 bits (96), Expect(4) = 2e-050
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 1029 VLHREDVVRILAKLFPEYPVPAR 1097
VLHREDVVR L K FP+YPVP R
Sbjct: 459 VLHREDVVRTLRKFFPDYPVPER 527
Score = 43.7 bits (89), Expect(2) = 6e-030
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -1 / -2
Query: 740 GFLAELEVAPARLVDHDVGPALGVHG 663
G LAE+EVAPARLVD V A+G+HG
Sbjct: 80 GLLAEVEVAPARLVDDGVRRAVGIHG 3
>gb|CD210709.1|CD210709 HS1_49_C07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_49_C07_A012 3', mRNA sequence
Length = 670
Score = 126 bits (270), Expect(3) = 2e-049
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +3 / +3
Query: 1008 RHLCAERVLHREDVVRILAKLFPEYPVPARCSDEVNPRKQPYKFSNQKLRDLGLQFRPVS 1187
R++CAER LHR ++ RILA LFPEYP+P RC D+VNP K+ YKF+NQ L+DLG++F PV
Sbjct: 270 RYVCAERTLHRGELCRILAGLFPEYPIPTRCKDQVNPPKKGYKFTNQPLKDLGIKFTPVH 449
Query: 1188 QSLYDTVKNLQEKGHL 1235
+ LY+ VK+LQEKG L
Sbjct: 450 EYLYEAVKSLQEKGFL 497
Score = 77.6 bits (163), Expect(2) = 1e-024
Identities = 38/88 (43%), Positives = 41/88 (46%)
Frame = -2 / -1
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P A G S T CASA S T T AC +L P RYLRMC +L F + C
Sbjct: 265 PPAPGASSTLTCASAASLTCT*ACDSLTYSLVCPVRYLRMCRVLVFMLGCSSSPSTTTGM 86
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQF 743
RA SHA CSA *QYQF
Sbjct: 85 TTARSSLRARAASHAPCSAIVFA*QYQF 2
Score = 66.1 bits (138), Expect(3) = 2e-049
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3 / +3
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGR 1010
Q ++N S HILKYL G + + N AYV V+D A+AH+RV E+P A GR
Sbjct: 117 QPSMNTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 269
Score = 57.9 bits (120), Expect(2) = 1e-024
Identities = 31/56 (55%), Positives = 31/56 (55%)
Frame = -2 / -1
Query: 1234 RCPFSWRFFTVS*SDWLTGRNCSPRSRSFWLENLYGCFRGFTSSEHLAGTGYSGKS 1067
R PFS R FT S TG N PRS W NL F GFT S HL G GYSGKS
Sbjct: 496 RNPFSCRDFTASYRYSCTGVNLIPRSFRGWFVNL*PFFGGFT*SLHLVGIGYSGKS 329
Score = 44.1 bits (90), Expect(3) = 2e-049
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 744 NWYCYGKAVAEHAAWETARRR 806
NWYCY K +AE AWE AR R
Sbjct: 3 NWYCYAKTIAEQGAWEAARAR 65
>gb|AW922257.1|AW922257 DG1_17_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 193 bits (415), Expect = 8e-048
Identities = 78/113 (69%), Positives = 93/113 (82%)
Frame = +3 / +2
Query: 309 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDA 488
VTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDGAA+RL+L +ADLLD ++
Sbjct: 11 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPES 190
Query: 489 ICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 647
+ A GC GVFH ASPVTDDPE M+EPA+RGT+YV+ AAA+ G R V +S
Sbjct: 191 LVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTSS 349
Score = 131 bits (280), Expect = 3e-029
Identities = 62/109 (56%), Positives = 66/109 (60%)
Frame = -2 / -2
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R P SAAA+ITY VPR AGS I SGSSVTGEA WKTP QP
Sbjct: 336 TTRLTPVSAAAVITYCVPRIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRR 157
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVT 308
APS ALR +FFGS+GFLTVP TV PFS T+ EAM P APVT
Sbjct: 156 TRRSAAPSRALRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 10
Score = 110 bits (235), Expect(2) = 1e-028
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +3 / +2
Query: 597 INAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAE 776
+ AA V+RVVFTSSIG V M+P R P+ VD++CWSDLE+C+ T+NWYCY K VAE
Sbjct: 296 VMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCKNTQNWYCYAKTVAE 475
Query: 777 HAAWETARRR 806
AWE AR+R
Sbjct: 476 QGAWEVARKR 505
Score = 85.4 bits (180), Expect(2) = 1e-027
Identities = 41/66 (62%), Positives = 45/66 (68%)
Frame = -2 / -2
Query: 796 AVSHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVP 617
A SHA CSAT L *QYQF VF Q SRSLQ SST G R G M T PM+DVNTTR T
Sbjct: 495 ATSHAPCSATVLA*QYQFCVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPV 316
Query: 616 ASAAAL 599
++AA +
Sbjct: 315 SAAAVI 298
Score = 60.6 bits (126), Expect(2) = 1e-027
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHA 306
+QQIG ED+ +GGAV+ +V VL + VPD A V+LLE+ L +P GD P +G A
Sbjct: 181 IQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLLEEALDKPGGDEPSSSGDA 8
Score = 38.2 bits (77), Expect(2) = 1e-028
Identities = 22/55 (40%), Positives = 23/55 (41%)
Frame = +1 / +3
Query: 313 PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARPICW 477
P G+SP G S SRR T A SG APP SS PICW
Sbjct: 15 PELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICW 179
>gb|BE125424.1|BE125424 DG1_25_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 487
Score = 193 bits (415), Expect = 8e-048
Identities = 78/113 (69%), Positives = 93/113 (82%)
Frame = +3 / +2
Query: 309 VTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDA 488
VTGA G+IASWLVK LLEKGYTV+GTVRNP DPKN HL+ALDGAA+RL+L +ADLLD ++
Sbjct: 11 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGAADRLVLLRADLLDPES 190
Query: 489 ICRAVQGCQGVFHTASPVTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 647
+ A GC GVFH ASPVTDDPE M+EPA+RGT+YV+ AAA+ G R V +S
Sbjct: 191 LVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMTAAADTGVKRVVFTSS 349
Score = 131 bits (280), Expect = 3e-029
Identities = 62/109 (56%), Positives = 66/109 (60%)
Frame = -2 / -2
Query: 634 TRRTVPASAAALITYSVPRTAGSTICSGSSVTGEAVWKTPWQPCTXXXXXXXXXXXXXXX 455
T R P SAAA+ITY VPR AGS I SGSSVTGEA WKTP QP
Sbjct: 336 TTRLTPVSAAAVITYCVPRIAGSIIISGSSVTGEAAWKTPSQPEKASTRLSGSSRSARRR 157
Query: 454 XXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVT 308
APS ALR +FFGS+GFLTVP TV PFS T+ EAM P APVT
Sbjct: 156 TRRSAAPSRALRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 10
Score = 87.2 bits (184), Expect(2) = 1e-021
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +3 / +2
Query: 597 INAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGK 764
+ AA V+RVVFTSSIG V M+P R P+ VD++CWSDLE+C T+NWYCY K
Sbjct: 296 VMTAAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCXNTQNWYCYAK 463
Score = 67.5 bits (141), Expect(2) = 2e-022
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 763 LP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAAL 599
L *QYQF VF Q SRSLQ SST G R G M T PM+DVNTTR T ++AA +
Sbjct: 462 LA*QYQFCVFXQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRLTPVSAAAVI 298
Score = 60.6 bits (126), Expect(2) = 2e-022
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHA 306
+QQIG ED+ +GGAV+ +V VL + VPD A V+LLE+ L +P GD P +G A
Sbjct: 181 IQQIGTQEDEAIGGAVKGPQVVVLWIDRVPDRATDCVTLLEEALDKPGGDEPSSSGDA 8
Score = 38.2 bits (77), Expect(2) = 1e-021
Identities = 22/55 (40%), Positives = 23/55 (41%)
Frame = +1 / +3
Query: 313 PARPGTSPRGW*SCCSRRDTL*RAPSGXXXXXXXXXXXXXXAPPSG*SSARPICW 477
P G+SP G S SRR T A SG APP SS PICW
Sbjct: 15 PELEGSSPPGLSSASSRRVTQSVARSGTLSIQRTTT*GPLTAPPIASSSCVPICW 179
>gb|CB927150.1|CB927150 ABA1_13_F08.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_13_F08_A012 5', mRNA sequence
Length = 627
Score = 190 bits (410), Expect = 4e-047
Identities = 77/78 (98%), Positives = 78/78 (100%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 393 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 572
Query: 471 LLDYDAICRAVQGCQGVF 524
LLDYDAICRAVQGCQGVF
Sbjct: 573 LLDYDAICRAVQGCQGVF 626
Score = 132 bits (283), Expect = 1e-029
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSL EQ L +PRGDVPGRAG AHG
Sbjct: 581 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLFEQHLDEPRGDVPGRAGDAHG 402
Query: 299 LPVP 288
LPVP
Sbjct: 401 LPVP 390
Score = 132 bits (283), Expect = 1e-029
Identities = 54/78 (69%), Positives = 55/78 (70%)
Frame = -2 / -3
Query: 523 KTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFT 344
KTPWQPCT APSSALRCAFFGSSGFLTVP TVYPFSSS T
Sbjct: 625 KTPWQPCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTVYPFSSSILT 446
Query: 343 NHEAMYPAAPVTHTVCPF 290
+HEAMYPAAPVTHTVCPF
Sbjct: 445 SHEAMYPAAPVTHTVCPF 392
>gb|CN132335.1|CN132335 OX1_5_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_5_C03_A002 5', mRNA sequence
Length = 626
Score = 141 bits (302), Expect(2) = 5e-046
Identities = 56/80 (70%), Positives = 64/80 (80%)
Frame = +3 / +1
Query: 303 VCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDY 482
VCVTG GY+ASWLVKLLL +GY V TVR+P DPKNAHL+ LDGA E L+L KAD+LD
Sbjct: 61 VCVTGGGGYVASWLVKLLLSRGYAVHATVRDPSDPKNAHLRRLDGAPESLLLFKADVLDR 240
Query: 483 DAICRAVQGCQGVFHTASPV 542
DA+ AV GC+GVFH ASPV
Sbjct: 241 DALAAAVAGCEGVFHVASPV 300
Score = 66.1 bits (138), Expect(2) = 5e-046
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +3 / +3
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAA 785
A A V++VV SS AV +P + DESCWSD FC K NWY K +AE A
Sbjct: 375 ACSANNVQKVVVVSSTAAVHYNPSWPHGRIKDESCWSDKNFCMKNENWYTAAKTIAEETA 554
Query: 786 WE 791
E
Sbjct: 555 LE 560
>gb|CN152656.1|CN152656 WOUND1_83_A06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_83_A06_A002 5', mRNA sequence
Length = 857
Score = 78.0 bits (164), Expect(4) = 7e-046
Identities = 31/87 (35%), Positives = 52/87 (59%)
Frame = +3 / +1
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV+GT V+ + +A + V+ +S + R P+V VDE+ ++D
Sbjct: 394 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETWFTD 573
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWETAR 800
+ CEKT+ WY K +AE AAW+ +R
Sbjct: 574 PQICEKTQQWYVLSKTLAEQAAWKFSR 654
Score = 73.5 bits (154), Expect(4) = 7e-046
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +3 / +1
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASW+V+LLL++GYTV+ TVR+ DPK
Sbjct: 133 GKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPK 249
Score = 59.7 bits (124), Expect(4) = 7e-046
Identities = 27/47 (57%), Positives = 30/47 (63%)
Frame = +3 / +1
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL ALDGA +RL L KA LL+ + AV GC VFHTASP
Sbjct: 241 DPKKTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 381
Score = 31.8 bits (63), Expect(4) = 7e-046
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3 / +1
Query: 882 AHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRAS 1004
A + L + T+ N+ +V+V+DVA AH+ +E P A+
Sbjct: 733 AEAILKLINGSSTYPNSSFGWVNVKDVALAHILAYEIPSAN 855
>gb|CN125662.1|CN125662 RHOH1_12_B03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_12_B03_A002 5', mRNA sequence
Length = 688
Score = 96.4 bits (204), Expect(3) = 2e-043
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +3 / +3
Query: 348 KLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFH 527
+LL Y V GTVR+P D KNAHL A+DGAA RL L +ADLLDY ++ AV GC GVFH
Sbjct: 120 RLLAGGRYVVHGTVRDPGDAKNAHLAAMDGAAARLRLFRADLLDYGSVAAAVAGCDGVFH 299
Query: 528 TASPV 542
ASPV
Sbjct: 300 VASPV 314
Score = 78.5 bits (165), Expect(3) = 2e-043
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3 / +3
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTRNWYCYGKAVAEHAA 785
A+ V+ VV SS+ AV ++P D V+DE+CWSD+EFC +NWYC K +AE A
Sbjct: 393 ASSEAKVKGVVVVSSVAAVMVNPGWPQDEVMDEACWSDVEFCRTNQNWYCLSKTLAETEA 572
Query: 786 WETARR 803
++ A+R
Sbjct: 573 FDYAKR 590
Score = 56.1 bits (116), Expect(3) = 9e-022
Identities = 25/58 (43%), Positives = 27/58 (46%)
Frame = -2 / -1
Query: 541 TGEAVWKTPWQPCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVY 368
TG+A WKTP QP T APS A RCAF S G TVP+T Y
Sbjct: 313 TGDATWKTPSQPATAAATLP*SSKSALNRRSRAAAPSIAARCAFLASPGSRTVPWTTY 140
Score = 51.5 bits (106), Expect(3) = 9e-022
Identities = 31/83 (37%), Positives = 42/83 (50%)
Frame = -2 / -1
Query: 790 SHAACSATALP*QYQFLVFSQNSRSLQHDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPAS 611
S+A+ SA+ L QYQF + QNS S Q SS T+S + G +TA DD TT T+ +
Sbjct: 577 SNASVSASVLERQYQF*LVLQNSTSDQQASSMTSSWGQPGFTITAATDDTTTTPLTLASE 398
Query: 610 AAALITYSVPRTAGSTICSGSSV 542
A S+ SGS +
Sbjct: 397 LALRTFMVPVTAGASSSTSGSPI 329
Score = 42.3 bits (86), Expect(3) = 2e-043
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3 / +3
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKG 368
G VCVTGA G++ASWLV+ LL G
Sbjct: 63 GTAVCVTGAGGFVASWLVERLLAGG 137
Score = 35.9 bits (72), Expect(3) = 9e-022
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / -3
Query: 359 EQQLHQPRGDVPGRAGHAHGLPVPR 285
E+ L +PRG RAGHAH P PR
Sbjct: 128 EEALDEPRGHEASRAGHAHRRPRPR 54
>gb|BI141372.1|BI141372 IP1_55_B03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 522
Score = 157 bits (338), Expect(3) = 3e-043
Identities = 67/86 (77%), Positives = 72/86 (83%)
Frame = +3 / +3
Query: 1095 RCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAAD 1274
RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT +
Sbjct: 93 RCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKE 272
Query: 1275 KDAPTAEMQQGGIAIRA*EGDATHEH 1352
+ AE+QQGGIAIRA* H H
Sbjct: 273 EANAAAEVQQGGIAIRA*ARGRCHVH 350
Score = 133 bits (286), Expect(3) = 1e-034
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 358 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 179
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHL 1094
GRN +PRSRSFW ENLYGCFRGFTSSEHL
Sbjct: 178 GRNSNPRSRSFWFENLYGCFRGFTSSEHL 92
Score = 103 bits (220), Expect(3) = 1e-023
Identities = 44/51 (86%), Positives = 48/51 (94%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAP 1095
SEHRQV+LLL+VLHR+VKRLA RPELQ QVPELLV ELVRLLPR+HLVGAP
Sbjct: 245 SEHRQVALLLKVLHRIVKRLAHRPELQSQVPELLVRELVRLLPRVHLVGAP 93
Score = 31.8 bits (63), Expect(3) = 3e-043
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +3
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 375 FILLPCPCCVNK 410
Score = 30.4 bits (60), Expect(3) = 1e-034
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 407 VYTAGAGQQYE*TLLF 360
Score = 26.7 bits (52), Expect(3) = 3e-043
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1441 NVMFVLVNYSE 1473
NVMFVLVNYS+
Sbjct: 461 NVMFVLVNYSD 493
Score = 23.5 bits (45), Expect(3) = 1e-023
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / -1
Query: 1395 CLHSRCRAAV* 1363
CLHSR RAAV*
Sbjct: 408 CLHSRGRAAV* 376
Score = 22.6 bits (43), Expect(3) = 1e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 1472 SL*FTRTNMTLQVL 1431
SL*FTRTN+T L
Sbjct: 492 SL*FTRTNITFTSL 451
Score = 22.6 bits (43), Expect(3) = 1e-034
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 1473 LAIVHKNEHDV 1441
+ IVHKNEH V
Sbjct: 493 ITIVHKNEHYV 461
>gb|CD228754.1|CD228754 CCC1_9_E11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_9_E11_A007 5', mRNA sequence
Length = 597
Score = 177 bits (380), Expect = 5e-043
Identities = 72/73 (98%), Positives = 73/73 (100%)
Frame = +3 / +1
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 379 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 558
Query: 471 LLDYDAICRAVQG 509
LLDYDAICRAVQG
Sbjct: 559 LLDYDAICRAVQG 597
Score = 134 bits (287), Expect = 4e-030
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -1
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 567 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 388
Query: 299 LPVP 288
LPVP
Sbjct: 387 LPVP 376
Score = 117 bits (250), Expect = 5e-025
Identities = 49/73 (67%), Positives = 50/73 (68%)
Frame = -2 / -2
Query: 508 PCTXXXXXXXXXXXXXXXXXXXXAPSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAM 329
PCT APSSALRCAFFGSSGFLTVP TVYPFSSS T+HEAM
Sbjct: 596 PCTARQMAS*SRRSALQRISRSAAPSSALRCAFFGSSGFLTVPLTVYPFSSSILTSHEAM 417
Query: 328 YPAAPVTHTVCPF 290
YPAAPVTHTVCPF
Sbjct: 416 YPAAPVTHTVCPF 378
>gb|BE362094.1|BE362094 DG1_84_C11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 174 bits (374), Expect = 4e-042
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3 / +3
Query: 291 NGQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 470
NGQTVCVTGAAGYIASWLVK+LLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD
Sbjct: 381 NGQTVCVTGAAGYIASWLVKMLLEKGYTVKGTVRNPDDPKNAHLKALDGAAERLILCKAD 560
Query: 471 LLDYDAICRAVQ 506
LLDYDAICRAVQ
Sbjct: 561 LLDYDAICRAVQ 596
Score = 134 bits (287), Expect = 4e-030
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = -1 / -2
Query: 479 VQQIGLAEDQPLGGAVQRLEVRVLRVIWVPDGALHSVSLLEQQLHQPRGDVPGRAGHAHG 300
VQ++GLAEDQPLG AVQRLEVRVLRVIWVPDGAL SVSLLEQ L +PRGDVPGRAG AHG
Sbjct: 569 VQEVGLAEDQPLGRAVQRLEVRVLRVIWVPDGALDSVSLLEQHLDEPRGDVPGRAGDAHG 390
Query: 299 LPVP 288
LPVP
Sbjct: 389 LPVP 378
Score = 114 bits (243), Expect = 4e-024
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -2 / -3
Query: 436 PSSALRCAFFGSSGFLTVPFTVYPFSSSSFTNHEAMYPAAPVTHTVCPF 290
PSSALRCAFFGSSGFLTVP TVYPFSSS T+HEAMYPAAPVTHTVCPF
Sbjct: 526 PSSALRCAFFGSSGFLTVPLTVYPFSSSILTSHEAMYPAAPVTHTVCPF 380
>gb|CD225805.1|CD225805 CCC1_41_H04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_H04_A007 5', mRNA sequence
Length = 659
Score = 76.2 bits (160), Expect(3) = 3e-041
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +3 / +3
Query: 540 VTDDPEQMVEPAVRGTEYVINAAAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSD 719
V D ++++PAV+GT V+ + +A + V+ +S + R P+V VDE+ ++D
Sbjct: 405 VKDPKAELLDPAVKGTLNVLGSCKKASITKVVITSSMAAVSYNEKPRTPEVTVDETWFTD 584
Query: 720 LEFCEKTRNWYCYGKAVAEHAAWE 791
+ CEKT+ WY K +AE AAW+
Sbjct: 585 PQICEKTQQWYVLSKTLAEQAAWK 656
Score = 73.5 bits (154), Expect(3) = 3e-041
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +3 / +3
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNPDDPK 410
G+ VCVTGA+GYIASW+V+LLL++GYTV+ TVR+ DPK
Sbjct: 144 GKVVCVTGASGYIASWIVRLLLDRGYTVRATVRDTADPK 260
Score = 59.7 bits (124), Expect(3) = 3e-041
Identities = 27/47 (57%), Positives = 30/47 (63%)
Frame = +3 / +3
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASP 539
D K HL ALDGA +RL L KA LL+ + AV GC VFHTASP
Sbjct: 252 DPKKTLHLTALDGAKDRLHLFKASLLEEGSFDAAVHGCDTVFHTASP 392
>gb|CW317851.1|CW317851 104_809_11473636_148_35864_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473636, DNA
sequence
Length = 745
Score = 106 bits (227), Expect(2) = 5e-041
Identities = 44/80 (55%), Positives = 57/80 (71%)
Frame = +3 / -1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q T+N S H+ +YL G+ R+ NAV AYVDVRDVA AH+ +E P A GR+LC VLH
Sbjct: 607 QQTLNFSTNHVARYLMGTKRSIPNAVAAYVDVRDVARAHVLAYERPSACGRYLCIGTVLH 428
Query: 1038 REDVVRILAKLFPEYPVPAR 1097
RE +V +L +LFP+YPV A+
Sbjct: 427 REQLVAMLKELFPQYPVTAK 368
Score = 83.5 bits (176), Expect(2) = 5e-041
Identities = 31/53 (58%), Positives = 43/53 (81%)
Frame = +3 / -1
Query: 1095 RCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGER 1253
RC D+ P +P+KFSNQ+LRDLGL+F P+ +SLY+TV LQ+KGHLPV+ ++
Sbjct: 259 RCEDDGKPMAKPFKFSNQRLRDLGLEFTPLRKSLYETVVCLQQKGHLPVIQQQ 101
>gb|CW148381.1|CW148381 104_547_11141925_148_35008_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141925, DNA
sequence
Length = 662
Score = 79.9 bits (168), Expect(3) = 2e-026
Identities = 40/97 (41%), Positives = 44/97 (45%)
Frame = -2 / -2
Query: 1006 PDARGLSKTRRCASATSRTSTYACTALAKVRAEPSRYLRMCAMLAFTVACXXXXXXXXXX 827
P A G S T CASA S T T AC +L P RYLRMC +L F + C
Sbjct: 574 PPAPGASSTLTCASAASLTCT*ACDSLTYSLVCPVRYLRMCRVLVFMLGCSSSPSTTTGM 395
Query: 826 XXXXXXXXXRAVSHAACSATALP*QYQFLVFSQNSRS 716
RA SHA CSA *QYQF F + S
Sbjct: 394 TTARSSPRARAASHAPCSAIVFA*QYQFCEFQRRQDS 284
Score = 66.1 bits (138), Expect(4) = 7e-041
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3 / +3
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGR 1010
Q ++N S HILKYL G + + N AYV V+D A+AH+RV E+P A GR
Sbjct: 426 QPSMNTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 578
Score = 62.0 bits (129), Expect(4) = 7e-041
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +3 / +1
Query: 606 AAEAGTVRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTR 743
AA VRR+V +S+IG + MDP+R PD + +S WSDLE+C+ T+
Sbjct: 67 AAADAGVRRLVLSSTIGTMYMDPRRDPDAALGDSSWSDLEYCKSTK 204
Score = 52.8 bits (109), Expect(4) = 7e-041
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3 / +3
Query: 1008 RHLCAERVLHREDVVRILAKLFPEYPVP 1091
R++CAER LHR ++ RILA LFPEYP+P
Sbjct: 579 RYVCAERTLHRGELCRILAGLFPEYPIP 662
Score = 45.1 bits (92), Expect(4) = 7e-041
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3 / +3
Query: 738 TRNWYCYGKAVAEHAAWETARRR 806
++NWYCY K +AE AWE AR R
Sbjct: 306 SQNWYCYAKTIAEQGAWEAARAR 374
Score = 43.7 bits (89), Expect(3) = 2e-026
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = -1 / -3
Query: 740 GFLAELEVAPARLVDHDVGPALGVHGHGADGRREHHPPH 624
G LA EVAPA + + V A +H HGADG +H PH
Sbjct: 201 GALAVFEVAPAGVTECRVRVAARIHVHGADGGGQHQAPH 85
Score = 35.4 bits (71), Expect(3) = 2e-026
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2 / -1
Query: 640 NTTRRTVPASAAALITYSVPRTAGSTICS 554
++TRR PASAAA T+ VP GS I S
Sbjct: 104 DSTRRRTPASAAASTTFRVPTIIGSMISS 18
>gb|CW486807.1|CW486807 fsbb001f252e20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f252e20, DNA
sequence
Length = 678
Score = 157 bits (338), Expect(2) = 1e-040
Identities = 67/86 (77%), Positives = 72/86 (83%)
Frame = +3 / -1
Query: 1095 RCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAAD 1274
RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT +
Sbjct: 345 RCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKE 166
Query: 1275 KDAPTAEMQQGGIAIRA*EGDATHEH 1352
+ AE+QQGGIAIRA* H H
Sbjct: 165 EANAAAEVQQGGIAIRA*ARGRCHVH 88
Score = 132 bits (283), Expect(2) = 9e-033
Identities = 54/89 (60%), Positives = 60/89 (67%)
Frame = -2 / +2
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 80 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 259
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHL 1094
GRN +P+SRSFW ENLYGCFRGFTSSEHL
Sbjct: 260 GRNSNPKSRSFWFENLYGCFRGFTSSEHL 346
Score = 101 bits (216), Expect(3) = 1e-029
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = -1 / +1
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAP 1095
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAP
Sbjct: 193 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAP 345
Score = 41.4 bits (84), Expect(3) = 1e-029
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / +3
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 111 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 206
Score = 31.8 bits (63), Expect(2) = 1e-040
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 63 FILLPCPCCVNK 28
Score = 30.4 bits (60), Expect(2) = 9e-033
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 31 VYTAGAGQQYE*TLLF 78
Score = 27.2 bits (53), Expect(3) = 1e-029
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 23 SSLFTQQGQGSSMN 64
>gb|CW393089.1|CW393089 fsbb001f079p24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079p24, DNA
sequence
Length = 542
Score = 157 bits (338), Expect(2) = 1e-040
Identities = 67/86 (77%), Positives = 72/86 (83%)
Frame = +3 / +2
Query: 1095 RCSDEVNPRKQPYKFSNQKLRDLGLQFRPVSQSLYDTVKNLQEKGHLPVLGERTTTEAAD 1274
RCSDEVNPRKQPYKFSNQKLRDLGL+FRPVSQSLYDTVKNLQEKGHLPVLGE+TT +
Sbjct: 176 RCSDEVNPRKQPYKFSNQKLRDLGLEFRPVSQSLYDTVKNLQEKGHLPVLGEQTTEADKE 355
Query: 1275 KDAPTAEMQQGGIAIRA*EGDATHEH 1352
+ AE+QQGGIAIRA* H H
Sbjct: 356 EANAAAEVQQGGIAIRA*ARGRCHVH 433
Score = 133 bits (286), Expect(2) = 3e-033
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = -2 / -3
Query: 1360 IALCSCVASPSQARMAIPPCCIXXXXXXXXXXXXXXXXXSTGRCPFSWRFFTVS*SDWLT 1181
+ +C+ + ARMAIPPCC STGR PFS RFFTVS*SDWLT
Sbjct: 441 VFMCTWHLPLAHARMAIPPCCTSAAALASSLSASVVCSPSTGRWPFS*RFFTVS*SDWLT 262
Query: 1180 GRNCSPRSRSFWLENLYGCFRGFTSSEHL 1094
GRN +PRSRSFW ENLYGCFRGFTSSEHL
Sbjct: 261 GRNSNPRSRSFWFENLYGCFRGFTSSEHL 175
Score = 101 bits (216), Expect(3) = 1e-029
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = -1 / -2
Query: 1247 SEHRQVSLLLEVLHRVVKRLADRPELQPQVPELLVGELVRLLPRIHLVGAP 1095
SEHRQV+LLL+VLHR+V+RLA RPELQ QVPELLV ELVRLLPR+HLVGAP
Sbjct: 328 SEHRQVALLLKVLHRIVERLAHRPELQSQVPELLVRELVRLLPRVHLVGAP 176
Score = 41.4 bits (84), Expect(3) = 1e-029
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 1329 LRHGWRSLPAASRPWGHPCRRPPSSSALRAPA 1234
L HGWR LPAA R P P SSALRAPA
Sbjct: 410 LTHGWRFLPAAPRRRRWPPPCRPPSSALRAPA 315
Score = 31.8 bits (63), Expect(2) = 1e-040
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / +2
Query: 1362 FILLPCTCCVNR 1397
FILLPC CCVN+
Sbjct: 458 FILLPCPCCVNK 493
Score = 30.4 bits (60), Expect(2) = 3e-033
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 1394 VYTAGAGQQYEHCFVF 1347
VYTAGAGQQYE +F
Sbjct: 490 VYTAGAGQQYE*TLLF 443
Score = 27.2 bits (53), Expect(3) = 1e-029
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 1402 TGLFTQQVQGSSMN 1361
+ LFTQQ QGSSMN
Sbjct: 498 SSLFTQQGQGSSMN 457
>gb|CL178474.1|CL178474 104_386_10894614_116_31912_294 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894614, DNA
sequence
Length = 750
Score = 78.5 bits (165), Expect(3) = 4e-040
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3 / -1
Query: 624 VRRVVFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTR 743
V+RVV+TSS GAV M+PKR PD VVDESCWSDLEFC KT+
Sbjct: 135 VQRVVYTSSYGAVHMNPKRSPDEVVDESCWSDLEFCLKTK 16
Score = 77.1 bits (162), Expect(3) = 4e-040
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +3 / -2
Query: 399 DDPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDD 551
+D KNAHL ALDGA ERL LC+AD+LDY ++ A + C+GVFH A PV+++
Sbjct: 467 EDRKNAHLHALDGAKERLSLCRADVLDYKSLVAAFRLCEGVFHVACPVSNN 315
Score = 55.6 bits (115), Expect(3) = 4e-040
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +3 / -1
Query: 303 VCVTGAAGYIASWLVKLLLEKGYTVKGTVRNP 398
VCVTGA G+I S LVK LL++GY V+GT RNP
Sbjct: 684 VCVTGAGGFIGSSLVKELLQRGYRVRGTARNP 589
>gb|CW287590.1|CW287590 104_765_11411495_116_35521_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11411495, DNA
sequence
Length = 690
Score = 91.3 bits (193), Expect(3) = 7e-040
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +3 / +3
Query: 402 DPKNAHLKALDGAAERLILCKADLLDYDAICRAVQGCQGVFHTASPVTDDP 554
DPKN HL+ALDGAA+RL+L +ADLLD +++ A GC GVFH ASPVTDDP
Sbjct: 327 DPKNDHLRALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPVTDDP 479
Score = 77.1 bits (162), Expect(3) = 7e-040
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +3 / +3
Query: 294 GQTVCVTGAAGYIASWLVKLLLEKGYTVKGTVRNP 398
G+TVCVTGA G+IASWLVK LLEKGYTV+GTVRNP
Sbjct: 60 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 164
Score = 41.8 bits (85), Expect(3) = 7e-040
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3 / +2
Query: 555 EQMVEPAVRGTEYVINAAAEAGTVRRVVFTS 647
E M+EP++RGT+YV+ AAA+ G R V +S
Sbjct: 572 EMMIEPSIRGTQYVMTAAADTGVKRVVFTSS 664
>gb|CW148380.1|CW148380 104_547_11141925_116_35012_095 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11141925, DNA
sequence
Length = 677
Score = 66.1 bits (138), Expect(4) = 4e-039
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3 / -3
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGR 1010
Q ++N S HILKYL G + + N AYV V+D A+AH+RV E+P A GR
Sbjct: 348 QPSMNTSTLHILKYLTGQTKEYVNESHAYVHVKDAAEAHVRVLEAPGAGGR 196
Score = 55.1 bits (114), Expect(4) = 4e-039
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +3 / -3
Query: 1008 RHLCAERVLHREDVVRILAKLFPEYPVPAR 1097
R++CAER LHR ++ RILA LFPEYP+P R
Sbjct: 195 RYVCAERTLHRGELCRILAGLFPEYPIPTR 106
Score = 53.8 bits (111), Expect(4) = 4e-039
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +3 / -1
Query: 636 VFTSSIGAVTMDPKRGPDVVVDESCWSDLEFCEKTR 743
V +S+IG + MDP+R PD + +S WSDLE+C+ T+
Sbjct: 677 VLSSTIGTMYMDPRRDPDAALGDSSWSDLEYCKSTK 570
Score = 45.1 bits (92), Expect(4) = 4e-039
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3 / -3
Query: 738 TRNWYCYGKAVAEHAAWETARRR 806
++NWYCY K +AE AWE AR R
Sbjct: 468 SQNWYCYAKTIAEQGAWEAARAR 400
>gb|CW181342.1|CW181342 104_596_11163456_116_36654_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11163456, DNA
sequence
Length = 583
Score = 137 bits (293), Expect(2) = 6e-039
Identities = 52/81 (64%), Positives = 67/81 (82%)
Frame = +3 / +1
Query: 858 QATVNASIAHILKYLDGSARTFANAVQAYVDVRDVADAHLRVFESPRASGRHLCAERVLH 1037
Q TVNAS H++KYL GSA+T+ NA QAYV V+DVA+AH+RV+E+P A GR++CAE LH
Sbjct: 259 QPTVNASTDHVMKYLTGSAKTYVNAAQAYVHVQDVAEAHVRVYEAPYAHGRYICAESTLH 438
Query: 1038 REDVVRILAKLFPEYPVPARC 1100
R ++ RILAKLFPEYP+P +C
Sbjct: 439 RGELCRILAKLFPEYPIPTKC 501
Score = 46.4 bits (95), Expect(2) = 6e-039
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +3 / +1
Query: 741 RNWYCYGKAVAEHAAWETARRR 806
+NWYCY K VAE AWE AR+R
Sbjct: 142 QNWYCYAKTVAEQGAWEVARKR 207
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,274,996,972
Number of Sequences: 832831
Number of extensions: 16884892
Number of successful extensions: 160350
Number of sequences better than 1.0e-020: 171
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 52716609000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)