TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161254.2.1
(1192 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD424983.1|CD424983 SA1_9_H04.g1_A002 Salicylic acid-tre... 477 e-140
gb|BE358332.1|BE358332 DG1_29_C02.b1_A002 Dark Grown 1 (DG1... 409 e-118
gb|CD424271.1|CD424271 SA1_4_H05.g1_A002 Salicylic acid-tre... 357 e-109
gb|BM323368.1|BM323368 PIC1_18_E04.b1_A002 Pathogen-infecte... 376 e-106
gb|CD232496.1|CD232496 SS1_45_A09.g1_A012 Salt-stressed see... 263 9e-098
gb|BI140713.1|BI140713 IP1_52_H01.b1_A002 Immature pannicle... 342 7e-093
gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING... 141 2e-092
gb|CD231662.1|CD231662 SS1_22_F04.g1_A012 Salt-stressed see... 236 3e-092
gb|CX622776.1|CX622776 GABR1_65_H12.g1_A002 GA- or brassino... 182 1e-090
gb|BG556638.1|BG556638 EM1_37_G04.b1_A002 Embryo 1 (EM1) So... 286 1e-081
gb|CD463169.1|CD463169 ETH1_42_E06.g1_A002 Ethylene-treated... 286 2e-081
gb|BF657255.1|BF657255 OV2_22_E11.b1_A002 Ovary 2 (OV2) Sor... 296 6e-079
gb|BI098360.1|BI098360 IP1_31_E11.b1_A002 Immature pannicle... 264 7e-079
gb|BG560033.1|BG560033 RHIZ2_68_F03.b1_A003 Rhizome2 (RHIZ2... 265 7e-070
gb|BG322938.1|BG322938 EM1_15_H09.b1_A002 Embryo 1 (EM1) So... 189 4e-066
gb|BI075789.1|BI075789 IP1_21_C05.b1_A002 Immature pannicle... 223 5e-057
gb|BI075931.1|BI075931 IP1_23_B05.b1_A002 Immature pannicle... 223 5e-057
gb|CF072403.1|CF072403 FE1_2_H07.g1_A002 Iron-deficient see... 153 3e-056
gb|BI351404.1|BI351404 IP1_71_B10.b1_A002 Immature pannicle... 123 3e-051
gb|CW262292.1|CW262292 104_729_11229977_148_35205_067 Sorgh... 150 2e-049
gb|CW262291.1|CW262291 104_729_11229977_116_35209_067 Sorgh... 163 4e-048
gb|CW469202.1|CW469202 fsbb001f221m21f0 Sorghum methylation... 158 1e-047
gb|AW564124.1|AW564124 LG1_282_F07.b1_A002 Light Grown 1 (L... 97 2e-041
gb|CW122132.1|CW122132 104_500_11110443_116_34667_004 Sorgh... 96 4e-040
gb|CW089678.1|CW089678 104_435_10948844_114_32597_078 Sorgh... 127 6e-039
gb|CW089679.1|CW089679 104_435_10948844_116_32599_078 Sorgh... 127 6e-039
gb|CN133998.1|CN133998 OX1_19_D01.g1_A002 Oxidatively-stres... 128 6e-039
gb|BM326547.1|BM326547 PIC1_58_D07.b1_A002 Pathogen-infecte... 162 1e-038
gb|BZ423213.1|BZ423213 id46f11.g1 WGS-SbicolorF (DH5a methy... 109 8e-038
gb|CF072886.1|CF072886 FE1_26_E01.g1_A002 Iron-deficient se... 83 3e-037
gb|BG488202.1|BG488202 RHIZ2_60_G05.b1_A003 Rhizome2 (RHIZ2... 149 8e-035
gb|BZ345347.1|BZ345347 hr49h09.b1 WGS-SbicolorF (JM107 adap... 92 9e-033
gb|CW169583.1|CW169583 104_579_11154749_116_36503_021 Sorgh... 141 2e-032
gb|CW206795.1|CW206795 104_635_11187778_148_36966_037 Sorgh... 141 2e-032
gb|BZ349906.1|BZ349906 hr47b09.g1 WGS-SbicolorF (JM107 adap... 104 8e-031
gb|BG273563.1|BG273563 OV2_27_C04.b1_A002 Ovary 2 (OV2) Sor... 135 1e-030
gb|CW434095.1|CW434095 fsbb001f149j24k0 Sorghum methylation... 69 1e-029
gb|CF431332.1|CF431332 NIT1_5_E04.g1_A002 Nitrogen-deficien... 127 2e-028
gb|CW469203.1|CW469203 fsbb001f221m21k0 Sorghum methylation... 100 9e-028
gb|CW190352.1|CW190352 104_612_11174457_148_36834_047 Sorgh... 124 3e-027
gb|CW315229.1|CW315229 104_806_11472253_148_35827_059 Sorgh... 55 4e-023
gb|CW159383.1|CW159383 104_565_11149329_116_36407_039 Sorgh... 103 5e-021
gb|CW169584.1|CW169584 104_579_11154749_148_36504_021 Sorgh... 78 5e-021
gb|CW329542.1|CW329542 104_826_11479899_148_35996_014 Sorgh... 78 5e-021
gb|CW329541.1|CW329541 104_826_11479899_116_35995_014 Sorgh... 78 5e-021
>gb|CD424983.1|CD424983 SA1_9_H04.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_9_H04_A002 5', mRNA sequence
Length = 704
Score = 477 bits (1036), Expect(3) = e-140
Identities = 194/209 (92%), Positives = 202/209 (96%)
Frame = +1 / +2
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 77 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 256
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 257 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFS 436
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSD 798
RNIVALRMEVLC++CPAGGVGVYNPGFWGMNIEDGKAYNLVMYV+SPET DLTVSLTSSD
Sbjct: 437 RNIVALRMEVLCNDCPAGGVGVYNPGFWGMNIEDGKAYNLVMYVKSPETTDLTVSLTSSD 616
Query: 799 GLQNLASATITVSGTSNWTKVEQKLVAKG 885
GLQNLASATITVSGTSNWTKVEQKLVAKG
Sbjct: 617 GLQNLASATITVSGTSNWTKVEQKLVAKG 703
Score = 447 bits (971), Expect(2) = e-130
Identities = 184/216 (85%), Positives = 195/216 (90%)
Frame = -2 / -2
Query: 885 SFSNQLLLHFCPI*CARNCYCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVH 706
SFSNQLLLHFCPI*CARNCY S*SQVLQ +RAC**NC*I CF LNIHN+IV LPIFYVH
Sbjct: 703 SFSNQLLLHFCPI*CARNCYRS*SQVLQSVRAC**NC*IRCFRRLNIHNKIVSLPIFYVH 524
Query: 705 APKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRA 526
APKTWV+NTNTTSWT+ITEDLHPQSNNVS ET*CTISRH++ GVISNDGPRV+V*WSMRA
Sbjct: 523 APKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVNV*WSMRA 344
Query: 525 SSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTS 346
SSFETSV DKLCPYAT CMV+LLKKYPK CFRDLPGKLWRGINLEGCCLGGLYF RPTS
Sbjct: 343 SSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGINLEGCCLGGLYF*RPTS 164
Query: 345 AAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
AAH E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 163 AAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 56
Score = 445 bits (967), Expect(2) = e-129
Identities = 193/209 (92%), Positives = 197/209 (94%)
Frame = -3 / -3
Query: 884 PLATSFCSTFVQFDVPETVIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFM 705
PLATSFCSTFVQFDVPETVIVAEAKFCNPSELVNETV+S VSGD TYITRL*AFPSSMFM
Sbjct: 702 PLATSFCSTFVQFDVPETVIVAEAKFCNPSELVNETVKSVVSGDLTYITRL*AFPSSMFM 523
Query: 704 PQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EP 525
PQKPGL*TPTPPAG S QRTSILRATMFRLKHDVRSVATN EESSPMMDHGSMFDGV* P
Sbjct: 522 PQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSPMMDHGSMFDGV*GP 343
Query: 524 PASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHL 345
PASKPLLLTSSAHMPPAPAWLISSKNIPN+VSGIFRASCG ASTLR AVWVASIS+GRHL
Sbjct: 342 PASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHL 163
Query: 344 QPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
QPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 162 QPTQNRSRTQKIVVEKDCLRSIGFHLW*A 76
Score = 438 bits (951), Expect(2) = e-126
Identities = 179/208 (86%), Positives = 186/208 (89%)
Frame = +3 / +1
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 79 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 258
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQS 620
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL + GD*SYIMFQ
Sbjct: 259 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQP 438
Query: 621 KHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*W 800
KHCCSEDGGPL**+SSWWCWCL PRFLGHEHRRWEGLQS YVC V N G NSFINKL*
Sbjct: 439 KHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWEGLQSCYVC*VSGNNGFNSFINKL*R 618
Query: 801 VAKLGFSYNNSFWHIKLDKSGAEAGC*R 884
+AKLGFSY+NSFWHIKLDKSGAEAGC*R
Sbjct: 619 IAKLGFSYDNSFWHIKLDKSGAEAGC*R 702
Score = 421 bits (913), Expect(2) = e-121
Identities = 179/209 (85%), Positives = 190/209 (90%)
Frame = -1 / -1
Query: 886 FL*QPASAPLLSNLMCQKLLL*LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCS 707
FL*QPASAPLLSNLMCQKLL *LKPSFA QSLLMKLL+PLF T HT*+DC+PSHLLCS
Sbjct: 704 FL*QPASAPLLSNLMCQKLLS*LKPSFAIRQSLLMKLLNPLFPET*HT*QDCKPSHLLCS 525
Query: 706 CPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYES 527
CPKNLG KHQHHQLD+H+RGPPSSEQQCF *NMMYDQSP+ RSHLQ*WTTG+CLMEYE
Sbjct: 524 CPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLMEYEG 345
Query: 526 LQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADI 347
LQLRNLCY*QALPICH+ LHG*SPQKISQ +FQGSSGQAVA HQP*GLLSGWPLF KADI
Sbjct: 344 LQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP*GLLSGWPLFLKADI 165
Query: 346 CSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
CSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 164 CSPHRIEAERRRL**RRIA*DP*ASTCGK 78
Score = 289 bits (625), Expect(3) = 2e-095
Identities = 129/160 (80%), Positives = 132/160 (82%)
Frame = +2 / +3
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 225 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 404
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQ 766
WRLIVHHVS ETLLL*GWR F TQVFGA*T*KMGR TI LCM S +KQ
Sbjct: 405 SWRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMGRLTILLCMLSLRKQ 584
Query: 767 RI*QFH*QALMGCKTWLQLQ*QFLAHQIGQKWSRSWLLKE 886
RI*QFH*QAL CKTWLQL+*QFLAHQIGQKWSRSWLLKE
Sbjct: 585 RI*QFH*QALTDCKTWLQLR*QFLAHQIGQKWSRSWLLKE 704
Score = 67.5 bits (141), Expect(3) = 2e-095
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +3
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 81 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 173
Score = 40.9 bits (83), Expect(2) = e-130
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 80 KH*CNECVMHPPSVASFPKQE 18
Score = 40.0 bits (81), Expect(3) = e-140
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +1
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 25 FGKEATDGGCMTHSLH*CL 81
Score = 38.2 bits (77), Expect(2) = e-129
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 81 *ALMQ*VCHASTIRCLLSK 25
Score = 37.7 bits (76), Expect(2) = e-121
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 94 LPLVVSTNAMSVSCIHHPLPPFQSKK 17
Score = 37.3 bits (75), Expect(2) = e-126
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 17 LLALERRQRMVDA*HTHCISAY 82
Score = 34.5 bits (69), Expect(3) = 2e-095
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 18 FLLWKGGNGWWMHDTLIALVLTTSGS 95
Score = 22.1 bits (42), Expect(3) = e-140
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 1 SGSSITSCFG 30
>gb|BE358332.1|BE358332 DG1_29_C02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 409 bits (887), Expect(2) = e-118
Identities = 164/179 (91%), Positives = 172/179 (96%)
Frame = +1 / +1
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 73 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 252
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 253 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFS 432
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSS 795
RNIVALRMEVLC++CPAGGVGVYNPGFWGMNIEDGKAYNLVMYV+SPET DLTVSLTSS
Sbjct: 433 RNIVALRMEVLCNDCPAGGVGVYNPGFWGMNIEDGKAYNLVMYVKSPETTDLTVSLTSS 609
Score = 384 bits (833), Expect(2) = e-111
Identities = 157/186 (84%), Positives = 167/186 (89%)
Frame = -2 / -2
Query: 795 RAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVST 616
RAC**NC*I CF LNIHN+IV LPIFYVHAPKTWV+NTNTTSWT+ITEDLHPQSNNVS
Sbjct: 609 RAC**NC*IRCFRRLNIHNKIVSLPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSA 430
Query: 615 ET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQ 436
ET*CTISRH++ GVISNDGPRV+V*WSMRASSFETSV DKLCPYAT CMV+LLKKYPK
Sbjct: 429 ET*CTISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK* 250
Query: 435 CFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGV 256
CFRDLPGKLWRGINLEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V
Sbjct: 249 CFRDLPGKLWRGINLEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVST 70
Query: 255 GANAMS 238
A ++S
Sbjct: 69 NAMSVS 52
Score = 374 bits (810), Expect(2) = e-107
Identities = 152/178 (85%), Positives = 157/178 (88%)
Frame = +3 / +3
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 75 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 254
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQS 620
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL + GD*SYIMFQ
Sbjct: 255 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQP 434
Query: 621 KHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL 794
KHCCSEDGGPL**+SSWWCWCL PRFLGHEHRRWEGLQS YVC V N G NSFINKL
Sbjct: 435 KHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWEGLQSCYVC*VSGNNGFNSFINKL 608
Score = 373 bits (809), Expect(2) = e-107
Identities = 163/179 (91%), Positives = 167/179 (93%)
Frame = -3 / -3
Query: 794 ELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRL 615
ELVNETV+S VSGD TYITRL*AFPSSMFMPQKPGL*TPTPPAG S QRTSILRATMFRL
Sbjct: 608 ELVNETVKSVVSGDLTYITRL*AFPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRL 429
Query: 614 KHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNS 435
KHDVRSVATN EESSPMMDHGSMFDGV* PPASKPLLLTSSAHMPPAPAWLISSKNIPN+
Sbjct: 428 KHDVRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNN 249
Query: 434 VSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
VSGIFRASCG ASTLR AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 248 VSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 72
Score = 364 bits (789), Expect(2) = e-104
Identities = 152/179 (84%), Positives = 163/179 (91%)
Frame = -1 / -1
Query: 796 QSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD 617
QSLLMKLL+PLF T HT*+DC+PSHLLCSCPKNLG KHQHHQLD+H+RGPPSSEQQCF
Sbjct: 610 QSLLMKLLNPLFPET*HT*QDCKPSHLLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG 431
Query: 616 *NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQT 437
*NMMYDQSP+ RSHLQ*WTTG+CLMEYE LQLRNLCY*QALPICH+ LHG*SPQKISQ
Sbjct: 430 *NMMYDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQI 251
Query: 436 VFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
+FQGSSGQAVA HQP*GLLSGWPLF KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 250 MFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*ASTCGK 74
Score = 221 bits (477), Expect(3) = 3e-075
Identities = 102/130 (78%), Positives = 104/130 (80%)
Frame = +2 / +2
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 221 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 400
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQ 766
WRLIVHHVS ETLLL*GWR F TQVFGA*T*KMGR TI LCM S +KQ
Sbjct: 401 SWRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMGRLTILLCMLSLRKQ 580
Query: 767 RI*QFH*QAL 796
RI*QFH*QAL
Sbjct: 581 RI*QFH*QAL 610
Score = 67.5 bits (141), Expect(3) = 3e-075
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +2
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 77 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 169
Score = 40.9 bits (83), Expect(2) = e-111
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 76 KH*CNECVMHPPSVASFPKQE 14
Score = 40.0 bits (81), Expect(2) = e-118
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +3
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 21 FGKEATDGGCMTHSLH*CL 77
Score = 38.2 bits (77), Expect(2) = e-107
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 77 *ALMQ*VCHASTIRCLLSK 21
Score = 37.7 bits (76), Expect(2) = e-104
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 90 LPLVVSTNAMSVSCIHHPLPPFQSKK 13
Score = 37.3 bits (75), Expect(2) = e-107
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 13 LLALERRQRMVDA*HTHCISAY 78
Score = 34.5 bits (69), Expect(3) = 3e-075
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 14 FLLWKGGNGWWMHDTLIALVLTTSGS 91
>gb|CD424271.1|CD424271 SA1_4_H05.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H05_A002 5', mRNA sequence
Length = 661
Score = 357 bits (774), Expect(5) = e-109
Identities = 141/154 (91%), Positives = 148/154 (96%)
Frame = +1 / +2
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 200 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 379
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 380 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFS 559
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIED 720
RNIVALRMEVLC++CPAGGVGVYNPGFWGMNIED
Sbjct: 560 RNIVALRMEVLCNDCPAGGVGVYNPGFWGMNIED 661
Score = 340 bits (737), Expect(4) = e-108
Identities = 137/161 (85%), Positives = 146/161 (90%)
Frame = -2 / -1
Query: 720 IFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV* 541
IFYVHAPKTWV+NTNTTSWT+ITEDLHPQSNNVS ET*CTISRH++ GVISNDGPRV+V*
Sbjct: 661 IFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVNV* 482
Query: 540 WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYF 361
WSMRASSFETSV DKLCPYAT CMV+LLKKYPK CFRDLPGKLWRGINLEGCCLGGLYF
Sbjct: 481 WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGINLEGCCLGGLYF 302
Query: 360 RRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
RPTSAAH E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 301 *RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 179
Score = 330 bits (716), Expect(3) = 4e-095
Identities = 133/153 (86%), Positives = 138/153 (90%)
Frame = +3 / +1
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 202 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 381
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQS 620
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL + GD*SYIMFQ
Sbjct: 382 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQP 561
Query: 621 KHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRR 719
KHCCSEDGGPL**+SSWWCWCL PRFLGHEHRR
Sbjct: 562 KHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRR 660
Score = 326 bits (707), Expect(4) = 9e-099
Identities = 141/154 (91%), Positives = 144/154 (93%)
Frame = -3 / -2
Query: 719 SSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFD 540
SSMFMPQKPGL*TPTPPAG S QRTSILRATMFRLKHDVRSVATN EESSPMMDHGSMFD
Sbjct: 660 SSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSPMMDHGSMFD 481
Query: 539 GV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASIS 360
GV* PPASKPLLLTSSAHMPPAPAWLISSKNIPN+VSGIFRASCG ASTLR AVWVASIS
Sbjct: 480 GV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLRVAVWVASIS 301
Query: 359 EGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 300 KGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 199
Score = 318 bits (689), Expect(4) = 2e-093
Identities = 132/153 (86%), Positives = 140/153 (91%)
Frame = -1 / -3
Query: 718 LLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLM 539
LLCSCPKNLG KHQHHQLD+H+RGPPSSEQQCF *NMMYDQSP+ RSHLQ*WTTG+CLM
Sbjct: 659 LLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLM 480
Query: 538 EYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFP 359
EYE LQLRNLCY*QALPICH+ LHG*SPQKISQ +FQGSSGQAVA HQP*GLLSGWPLF
Sbjct: 479 EYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP*GLLSGWPLFL 300
Query: 358 KADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 299 KADICSPHRIEAERRRL**RRIA*DP*ASTCGK 201
Score = 178 bits (384), Expect(4) = 1e-063
Identities = 81/104 (77%), Positives = 82/104 (78%)
Frame = +2 / +3
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 348 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 527
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*K 718
WRLIVHHVS ETLLL*GWR F TQVFGA*T*K
Sbjct: 528 SWRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*K 659
Score = 67.5 bits (141), Expect(4) = 1e-063
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +3
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 204 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 296
Score = 42.3 bits (86), Expect(4) = e-108
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -1 / -2
Query: 139 K*KEEAKQWL*REARRATGHGSHARG 62
K K++AKQWL*REA TG+G HARG
Sbjct: 78 KKKKKAKQWL*REACVPTGYGRHARG 1
Score = 40.9 bits (83), Expect(4) = e-108
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 203 KH*CNECVMHPPSVASFPKQE 141
Score = 40.0 bits (81), Expect(5) = e-109
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +1
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 148 FGKEATDGGCMTHSLH*CL 204
Score = 38.2 bits (77), Expect(4) = 9e-099
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 204 *ALMQ*VCHASTIRCLLSK 148
Score = 37.7 bits (76), Expect(4) = 2e-093
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 217 LPLVVSTNAMSVSCIHHPLPPFQSKK 140
Score = 37.3 bits (75), Expect(3) = 4e-095
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 140 LLALERRQRMVDA*HTHCISAY 205
Score = 34.5 bits (69), Expect(4) = 1e-063
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 141 FLLWKGGNGWWMHDTLIALVLTTSGS 218
Score = 33.6 bits (67), Expect(4) = 9e-099
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2 / -3
Query: 111 FEGKRAGLRATEATRG 64
FEGKRA LRATE TRG
Sbjct: 50 FEGKRACLRATEGTRG 3
Score = 29.9 bits (59), Expect(4) = e-108
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 199 SKGRSDRATGCECRPGPAALK*KEEAKQ 116
SK RSD ATGC ALK*+++ K+
Sbjct: 153 SKARSDGATGCPDASARPALK*QKKKKK 70
Score = 28.6 bits (56), Expect(5) = e-109
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 87 VARRASLQSHCFASSFY 137
V ASLQSHCFA F+
Sbjct: 26 VGTHASLQSHCFAFFFF 76
Score = 25.4 bits (49), Expect(5) = e-109
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 62 TPRVASVARSPARF 103
TPRV SVAR ARF
Sbjct: 1 TPRVPSVARRHARF 42
Score = 24.9 bits (48), Expect(5) = e-109
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 135 YLSAAGPGRHSHPVARSLLPLD 200
YLSA HPVA SLL L+
Sbjct: 89 YLSAGRALASGHPVAPSLLALE 154
Score = 24.0 bits (46), Expect(4) = 2e-093
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 110 LKGSAPGYGPRKPRE 66
LKGS YG RK RE
Sbjct: 49 LKGSVRAYGLRKARE 5
Score = 22.6 bits (43), Expect(4) = 2e-093
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1 / -1
Query: 208 FPKSKGRSDRATGCECRP 155
F K S R +GCEC P
Sbjct: 154 FQSKK*WSYRMSGCECPP 101
Score = 22.6 bits (43), Expect(4) = 9e-099
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 209 LPKIQRKK*SSYRM 168
LP Q KK* SYRM
Sbjct: 163 LPPFQSKK*WSYRM 122
Score = 22.1 bits (42), Expect(4) = 1e-063
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 124 SGSSITSCFG 153
Score = 22.1 bits (42), Expect(3) = 4e-095
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 123 IR*LHHFLLW 152
>gb|BM323368.1|BM323368 PIC1_18_E04.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 532
Score = 376 bits (815), Expect(2) = e-106
Identities = 149/162 (91%), Positives = 156/162 (96%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 45 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 224
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 225 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFS 404
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVM 744
RNIVALRMEVLC++CPAGGVGVYNPGFWGMNIEDGKAYNLVM
Sbjct: 405 RNIVALRMEVLCNDCPAGGVGVYNPGFWGMNIEDGKAYNLVM 530
Score = 356 bits (771), Expect = 5e-097
Identities = 143/169 (84%), Positives = 153/169 (90%)
Frame = -2 / -3
Query: 744 HNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISN 565
HN+IV LPIFYVHAPKTWV+NTNTTSWT+ITEDLHPQSNNVS ET*CTISRH++ GVISN
Sbjct: 530 HNKIVSLPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISN 351
Query: 564 DGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGINLEG 385
DGPRV+V*WSMRASSFETSV DKLCPYAT CMV+LLKKYPK CFRDLPGKLWRGINLEG
Sbjct: 350 DGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGINLEG 171
Query: 384 CCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
CCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 170 CCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 24
Score = 350 bits (759), Expect(2) = 2e-097
Identities = 141/162 (87%), Positives = 146/162 (90%)
Frame = +3 / +2
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 47 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 226
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQS 620
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL + GD*SYIMFQ
Sbjct: 227 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQP 406
Query: 621 KHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYV 746
KHCCSEDGGPL**+SSWWCWCL PRFLGHEHRRWEGLQS YV
Sbjct: 407 KHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWEGLQSCYV 532
Score = 346 bits (750), Expect(2) = 9e-097
Identities = 150/163 (92%), Positives = 153/163 (93%)
Frame = -3 / -1
Query: 746 YITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSP 567
YITRL*AFPSSMFMPQKPGL*TPTPPAG S QRTSILRATMFRLKHDVRSVATN EESSP
Sbjct: 532 YITRL*AFPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSP 353
Query: 566 MMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLR 387
MMDHGSMFDGV* PPASKPLLLTSSAHMPPAPAWLISSKNIPN+VSGIFRASCG ASTLR
Sbjct: 352 MMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLR 173
Query: 386 AAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 172 VAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 44
Score = 338 bits (732), Expect(2) = 7e-094
Identities = 139/162 (85%), Positives = 149/162 (91%)
Frame = -1 / -2
Query: 745 T*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ 566
T*+DC+PSHLLCSCPKNLG KHQHHQLD+H+RGPPSSEQQCF *NMMYDQSP+ RSHLQ
Sbjct: 531 T*QDCKPSHLLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ 352
Query: 565 *WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*G 386
*WTTG+CLMEYE LQLRNLCY*QALPICH+ LHG*SPQKISQ +FQGSSGQAVA HQP*G
Sbjct: 351 *WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP*G 172
Query: 385 LLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
LLSGWPLF KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 171 LLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*ASTCGK 46
Score = 193 bits (417), Expect(3) = 7e-064
Identities = 88/113 (77%), Positives = 89/113 (78%)
Frame = +2 / +1
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 193 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 372
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLC 745
WRLIVHHVS ETLLL*GWR F TQVFGA*T*KMGR TI LC
Sbjct: 373 SWRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMGRLTILLC 531
Score = 67.5 bits (141), Expect(3) = 7e-064
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 49 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 141
Score = 31.3 bits (62), Expect(2) = e-106
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 217 RTSDA*HTHCISAY 258
R DA*HTHCISAY
Sbjct: 9 RMVDA*HTHCISAY 50
Score = 29.9 bits (59), Expect(2) = 9e-097
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 256 RR*CNECVMHPTS 218
+ *CNECVMHP S
Sbjct: 48 KH*CNECVMHPPS 10
Score = 28.6 bits (56), Expect(2) = 7e-094
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3 / -1
Query: 257 *ALMQ*VCHASDVR 216
*ALMQ*VCHAS +R
Sbjct: 49 *ALMQ*VCHASTIR 8
Score = 28.1 bits (55), Expect(2) = 2e-097
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 216 SDVGCMTHSLH*RL 257
+D GCMTHSLH* L
Sbjct: 8 ADGGCMTHSLH*CL 49
Score = 24.0 bits (46), Expect(3) = 7e-064
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 227 MHDTLIALAPTPTAS 271
MHDTLIAL T + S
Sbjct: 19 MHDTLIALVLTTSGS 63
>gb|CD232496.1|CD232496 SS1_45_A09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_45_A09_A012 5', mRNA sequence
Length = 531
Score = 263 bits (568), Expect(3) = 9e-098
Identities = 102/110 (92%), Positives = 109/110 (99%)
Frame = +1 / +1
Query: 397 DASPQLARKIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDD 576
+A+PQLARKIPETLFGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDD
Sbjct: 202 EATPQLARKIPETLFGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDD 381
Query: 577 SSVFVATDRTSCFSRNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGK 726
SS+F+ATDRTSCFSRNIVALRMEVLC++CPAGGVGVYNPGFWGMNIEDGK
Sbjct: 382 SSIFMATDRTSCFSRNIVALRMEVLCNDCPAGGVGVYNPGFWGMNIEDGK 531
Score = 247 bits (534), Expect(3) = 3e-094
Identities = 97/110 (88%), Positives = 104/110 (94%)
Frame = -2 / -1
Query: 726 LPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVD 547
LPIFYVHAPKTWV+NTNTTSWT+ITEDLHPQSNNVS ET*CTISRH++ GVISNDGPRV+
Sbjct: 531 LPIFYVHAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVN 352
Query: 546 V*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGI 397
V*WSMRASSFETSV DKLCPYAT CMV+LLKKYPK CFRDLPGKLWRG+
Sbjct: 351 V*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGL 202
Score = 247 bits (533), Expect(3) = 1e-088
Identities = 94/107 (87%), Positives = 97/107 (90%)
Frame = +3 / +3
Query: 405 ATACPEDP*NTVWDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLR 584
ATACPEDP*N +WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL
Sbjct: 210 ATACPEDP*NIIWDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLY 389
Query: 585 VCGD*SYIMFQSKHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWE 725
+ GD*SYIMFQ KHCCSEDGGPL**+SSWWCWCL PRFLGHEHRRWE
Sbjct: 390 IHGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQPRFLGHEHRRWE 530
Score = 243 bits (524), Expect(3) = 2e-088
Identities = 103/110 (93%), Positives = 104/110 (94%)
Frame = -3 / -2
Query: 725 FPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSM 546
FPSSMFMPQKPGL*TPTPPAG S QRTSILRATMFRLKHDVRSVA N EESSPMMDHGSM
Sbjct: 530 FPSSMFMPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVAMNIEESSPMMDHGSM 351
Query: 545 FDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEAS 396
FDGV* PPASKPLLLTSSAHMPPAPAWLISSKNIPN+VSGIFRASCG AS
Sbjct: 350 FDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVAS 201
Score = 232 bits (502), Expect(3) = 4e-083
Identities = 94/107 (87%), Positives = 99/107 (92%)
Frame = -1 / -3
Query: 724 SHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRC 545
SHLLCSCPKNLG KHQHHQLD+H+RGPPSSEQQCF *NMMYDQSP RSHLQ*WTTG+C
Sbjct: 529 SHLLCSCPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSP*I*RSHLQ*WTTGQC 350
Query: 544 LMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVA 404
LMEYE LQLRNLCY*QALPICH+ LHG*SPQKISQ +FQGSSGQAVA
Sbjct: 349 LMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVA 209
Score = 183 bits (395), Expect(3) = 1e-062
Identities = 83/106 (78%), Positives = 84/106 (79%)
Frame = +2 / +2
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 212 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 391
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMG 724
WRLIVHHVS ETLLL*GWR F TQVFGA*T*KMG
Sbjct: 392 SWRLIVHHVSAETLLL*GWRSSVMTVQLVVLVFTTQVFGA*T*KMG 529
Score = 98.7 bits (209), Expect(3) = 3e-094
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = -2 / -3
Query: 393 LEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
LEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V + A ++S
Sbjct: 202 LEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSINAMSVS 47
Score = 97.3 bits (206), Expect(3) = 9e-098
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +1 / +2
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALK 393
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LK
Sbjct: 68 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLK 202
Score = 88.1 bits (186), Expect(3) = 1e-088
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +3 / +1
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQ 392
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQ
Sbjct: 70 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQ 201
Score = 87.7 bits (185), Expect(3) = 2e-088
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = -3 / -1
Query: 392 LRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
LR AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 201 LRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 67
Score = 84.0 bits (177), Expect(3) = 4e-083
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1 / -2
Query: 391 *GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
*GLLSGWPLF KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 200 *GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*ASTCGK 69
Score = 67.5 bits (141), Expect(3) = 1e-062
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +3
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 72 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 164
Score = 40.9 bits (83), Expect(3) = 3e-094
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 71 KH*CNECVMHPPSVASFPKQE 9
Score = 38.6 bits (78), Expect(3) = 9e-098
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3 / +1
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGK+A+D GCMTHSLH* L
Sbjct: 16 FGKDATDGGCMTHSLH*CL 72
Score = 37.3 bits (75), Expect(3) = 2e-088
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -3 / -1
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RC+L K
Sbjct: 72 *ALMQ*VCHASTIRCILSK 16
Score = 33.1 bits (66), Expect(3) = 4e-083
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2 / -3
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+ P Q+ K
Sbjct: 85 LPLVVSINAMSVSCIHHPLHPFQSKK 8
Score = 33.1 bits (66), Expect(3) = 1e-088
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L R R DA*HTHCI+AY
Sbjct: 8 LLALERMQRMVDA*HTHCINAY 73
Score = 29.9 bits (59), Expect(3) = 1e-062
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2 / +3
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+G G MHDTLIAL T + S
Sbjct: 9 FLLWKGCNGWWMHDTLIALMLTTSGS 86
>gb|BI140713.1|BI140713 IP1_52_H01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 457
Score = 342 bits (741), Expect = 7e-093
Identities = 138/150 (92%), Positives = 143/150 (95%)
Frame = +1 / +2
Query: 607 SCFSRNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSL 786
+CFSRNI+ALRMEVLCD CP GGVG+YNPGFWGMNIEDGKAYNLVMYV+SPET DL VSL
Sbjct: 8 ACFSRNIIALRMEVLCDNCPTGGVGIYNPGFWGMNIEDGKAYNLVMYVKSPETTDLIVSL 187
Query: 787 TSSDGLQNLASATITVSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPE 966
TSSDGLQNLASATITVSG SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVW DQVSLMPE
Sbjct: 188 TSSDGLQNLASATITVSGESNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWFDQVSLMPE 367
Query: 967 DTYKGHGFRTELISMLLDLKPRFLRFPGGC 1056
DTYKGHGFRTELISM+LDL PRFLRFPGGC
Sbjct: 368 DTYKGHGFRTELISMILDLTPRFLRFPGGC 457
Score = 301 bits (651), Expect = 2e-080
Identities = 130/149 (87%), Positives = 137/149 (91%)
Frame = -3 / -2
Query: 1055 QPPGNLKNRGFKSKSMDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLA 876
QPPGNLKNRG KSK MDISSVRKPCPLYVSSGMSDT*S+QTTPFL VVI*SL+VLLVPLA
Sbjct: 456 QPPGNLKNRGVKSKIMDISSVRKPCPLYVSSGMSDT*SNQTTPFLLVVI*SLEVLLVPLA 277
Query: 875 TSFCSTFVQFDVPETVIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQK 696
T+FCSTFVQFD PETVIVAEA+FCNPSELV+ET++S VSGD TYITRL*AFPSSMFMPQ
Sbjct: 276 TNFCSTFVQFDSPETVIVAEARFCNPSELVSETIKSVVSGDLTYITRL*AFPSSMFMPQN 97
Query: 695 PGL*TPTPPAGHSSQRTSILRATMFRLKH 609
PGL* PTPP G SQRTSILRA MFRLKH
Sbjct: 96 PGL*IPTPPVGQLSQRTSILRAMMFRLKH 10
Score = 294 bits (636), Expect = 2e-078
Identities = 122/148 (82%), Positives = 131/148 (88%)
Frame = -2 / -1
Query: 1053 TSRKSQESWFQIQKHGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSN 874
TSRKSQESW IQ HGYKFCA+ MSLVCVFRHE*YLIKPNNSF V CYLKP* SIGSFSN
Sbjct: 454 TSRKSQESWC*IQNHGYKFCAKAMSLVCVFRHE*YLIKPNNSFLVSCYLKP*GSIGSFSN 275
Query: 873 QLLLHFCPI*CARNCYCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKT 694
QLLLHFCPI* A NCYCS*SQ+LQPIRAC**N + CFW LNIHN+IVGL IFYVHAP+
Sbjct: 274 QLLLHFCPI*FAGNCYCS*SQILQPIRAC**NYQVGCFW*LNIHNKIVGLSIFYVHAPEP 95
Query: 693 WVINTNTTSWTLITEDLHPQSNNVSTET 610
WV+NTNTTS T+I +DLHPQSN+VSTET
Sbjct: 94 WVVNTNTTSRTVIAKDLHPQSNDVSTET 11
Score = 289 bits (626), Expect = 5e-077
Identities = 120/149 (80%), Positives = 126/149 (84%)
Frame = +3 / +1
Query: 609 MFQSKHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFIN 788
MFQSKH CSEDGGPL *+S WWCW L PR LGHEHRRW+GLQS YVC V RN +SF N
Sbjct: 10 MFQSKHHCSEDGGPLR*LSYWWCWYLQPRVLGHEHRRWKGLQSCYVC*VTRNNRLDSFTN 189
Query: 789 KL*WVAKLGFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*R 968
KL*WVAK GFSYNNSF IKLDKSGA+ GC*RNQ*N+KASNNN Q+RSCL *SSITHA*R
Sbjct: 190 KL*WVAKSGFSYNNSFRRIKLDKSGAKVGC*RNQ*NLKASNNN*QERSCLV*SSITHA*R 369
Query: 969 HIQGTWFPHRTYIHAFGFETTILEISWRL 1055
HIQGTW HRTYIH FGF TTILEISWRL
Sbjct: 370 HIQGTWLSHRTYIHDFGFNTTILEISWRL 456
Score = 273 bits (591), Expect = 3e-072
Identities = 117/149 (78%), Positives = 128/149 (85%)
Frame = -1 / -3
Query: 1054 NLQEISRIVVSNPKAWI*VLCGNHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*Q 875
NLQEISRIVV NPK+WI*VLC +HVPCMCLQA*VILDQ KQLL C LLFEAL FYWFL*Q
Sbjct: 455 NLQEISRIVVLNPKSWI*VLCESHVPCMCLQA*VILDQTKQLLSC*LLFEALRFYWFL*Q 276
Query: 874 PASAPLLSNLMCQKLLL*LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKN 695
P APLLSNL+ +KLLL*LKP FATHQSLL+KL LFL T HT*+DCRP HLLCSCP+
Sbjct: 275 PTFAPLLSNLIRRKLLL*LKPDFATHQSLLVKLSSRLFLVT*HT*QDCRPFHLLCSCPRT 96
Query: 694 LGYKHQHHQLDTHHRGPPSSEQQCFD*NM 608
LG K+QHHQ D++ +GPPSSEQ CFD*NM
Sbjct: 95 LGCKYQHHQ*DSYRKGPPSSEQ*CFD*NM 9
Score = 256 bits (554), Expect = 4e-067
Identities = 115/149 (77%), Positives = 119/149 (79%)
Frame = +2 / +3
Query: 608 HVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQRI*QFH* 787
HVSVET LL*GWR F TQ GA*T*KM RPTI LCM S QKQ * FH*
Sbjct: 9 HVSVETSLL*GWRSFAITVLLVVLVFTTQGSGA*T*KMERPTILLCMLSHQKQPT**FH* 188
Query: 788 QALMGCKTWLQLQ*QFLAHQIGQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLK 967
QALMGCK WLQLQ*QF A+QIGQKWS+SWLLKEPIE QGFK*Q T+KELFGLIKYHSCLK
Sbjct: 189 QALMGCKIWLQLQ*QFPANQIGQKWSKSWLLKEPIEPQGFK*QLTRKELFGLIKYHSCLK 368
Query: 968 THTRDMVSAQNLYPCFWI*NHDS*DFLEV 1054
THTRDM AQNLYP FWI*+HDS*DFLEV
Sbjct: 369 THTRDMAFAQNLYP*FWI*HHDS*DFLEV 455
>gb|AC169378.1| Sorghum bicolor clone SB_BBc0007L02, WORKING DRAFT SEQUENCE, 2
unordered pieces
Length = 138609
Score = 141 bits (303), Expect(6) = 2e-092
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = +1 / -3
Query: 493 ELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAG 672
+++ GFEAGG +TPSNIDPW+IIGD+SS++V T+ SCF+RNIVALRMEVLCD C G
Sbjct: 14191 DIIYPLGFEAGGPYTPSNIDPWNIIGDESSIYVTTEAASCFTRNIVALRMEVLCDNCRTG 14012
Query: 673 GVGVYNPGFWGM 708
GVG+YNPGFWGM
Sbjct: 14011 GVGIYNPGFWGM 13976
Score = 124 bits (265), Expect(6) = 2e-092
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +1 / -3
Query: 1012 LLDLKPRFLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
LL L+ + F GGCFVEGD LRNAFRW+E+IGPWEERPGH+GD W YWTDDGLGY+EFL
Sbjct: 9667 LLTLQYLRIIFIGGCFVEGDQLRNAFRWKETIGPWEERPGHYGDFWKYWTDDGLGYFEFL 9488
Score = 106 bits (226), Expect(6) = 2e-059
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -3 / +3
Query: 707 MPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*E 528
MPQ PGL* PTPP SQRTSILRAT+F +K + SV T E+SSPMM HGSMF+GV*
Sbjct: 13977 MPQNPGL*MPTPPVRQLSQRTSILRATIFLVKQEAASVVTYMEDSSPMMFHGSMFEGV*G 14156
Query: 527 PPASKP 510
PPASKP
Sbjct: 14157 PPASKP 14174
Score = 86.3 bits (182), Expect(6) = 2e-059
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = -3 / +3
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPP 1047
RNS YP PSSVQ Q SP CPGLSSHGPI S HL AFL+ SPSTKQPP
Sbjct: 9489 RNSKYPRPSSVQYFQKSP*CPGLSSHGPIVSFHLKAFLNWSPSTKQPP 9632
Score = 84.5 bits (178), Expect(7) = 7e-044
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3 / -2
Query: 510 RFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSWWCWCL* 689
RF SWR + KHRP+ HHWR*+ + D*S ++F K+CCS++GG L* + +W W L
Sbjct: 14174 RF*SWRALHPFKHRPMEHHWR*VFHIRDD*SCLLFH*KYCCSKNGGSL*QLPNWGRWHLQ 13995
Query: 690 PRFLGH 707
P LGH
Sbjct: 13994 PGILGH 13977
Score = 78.0 bits (164), Expect(6) = 2e-092
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1 / -3
Query: 844 SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYK 978
S+WT+VE +LVA T RTSRL +TT+K+GV+W DQVSLMP DTY+
Sbjct: 13375 SDWTRVELQLVAHETCRTSRLDLTTSKRGVIWFDQVSLMPSDTYR 13241
Score = 72.5 bits (152), Expect(6) = 3e-030
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = -2 / +2
Query: 708 HAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMR 529
HAP++ V+N N S ++TE+LH SNN+S+ET + SRH +G +ISND P V V* +
Sbjct: 13976 HAPESRVVNANAPSSAIVTENLHS*SNNISSETGGSFSRHVYGRLISNDVPWVYV*RGVG 14155
Query: 528 ASSFET 511
SSF+T
Sbjct: 14156 PSSFKT 14173
Score = 63.4 bits (132), Expect(6) = 3e-030
Identities = 30/51 (58%), Positives = 33/51 (64%)
Frame = -2 / +2
Query: 1191 KELIISKPIISPVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKS 1039
K+L I K II PV P + VSR LFPWTN F PSE IS* V F K T K+
Sbjct: 9488 KKLKIPKAIIGPVFPKVSIVSRSLFPWTNSFLPSESIS*LVAFNKATPYKN 9640
Score = 58.8 bits (122), Expect(7) = 7e-044
Identities = 29/47 (61%), Positives = 30/47 (63%)
Frame = +2 / -1
Query: 1052 VVL*KVTG*EMHSDGENQLVHGKRGLDTSGMFGITGLMMGLDIMSSF 1192
V L K T *EM SDG LVHGKR LDT FG TG MM L I+S F
Sbjct: 9627 VALLKATS*EMLSDGRKLLVHGKRDLDTMETFGNTGPMMALGILSFF 9487
Score = 53.3 bits (110), Expect(7) = 7e-044
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +1 / -2
Query: 976 KGHGFRTELISMLLDLKPRFLRFPG 1050
+GHGFR E + MLLDLKPRFLRFPG
Sbjct: 12893 QGHGFRKEFMHMLLDLKPRFLRFPG 12819
Score = 50.6 bits (104), Expect(6) = 2e-059
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -3 / +3
Query: 977 LYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFD 843
LYVS GMSDT*S+ TP L VV S +VL V ATS ST VQ D
Sbjct: 13242 LYVSEGMSDT*SNHMTPLLEVVRSSREVLHVS*ATSCSSTLVQSD 13376
Score = 47.8 bits (98), Expect(6) = 2e-092
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1 / -2
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSS 795
NIE+GK YNLVMYV+S E+ +LT SLT S
Sbjct: 13610 NIEEGKTYNLVMYVRSLESVELTASLTCS 13524
Score = 47.3 bits (97), Expect(6) = 2e-092
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 457 EINHAGAGGIWAELVSNRG 513
EINHAGAGGIW ELVSNRG
Sbjct: 14712 EINHAGAGGIWEELVSNRG 14656
Score = 43.2 bits (88), Expect(6) = 2e-059
Identities = 20/33 (60%), Positives = 22/33 (66%)
Frame = -3 / +1
Query: 806 CNPSELVNETVRSFVSGD*TYITRL*AFPSSMF 708
C E V+E V S S D TY+TRL* FPSSMF
Sbjct: 13513 CESLEQVSEAVNSTDSSDLTYMTRL*VFPSSMF 13611
Score = 42.3 bits (86), Expect(6) = 2e-059
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3 / +2
Query: 512 PLLLTSSAHMPPAPAWLIS 456
PLLLTSS+ +PPAPAWLIS
Sbjct: 14657 PLLLTSSSQIPPAPAWLIS 14713
Score = 40.9 bits (83), Expect(6) = 2e-092
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 358 SEIEATQTAALKVDASPQLARKIPETLFGIFFE 456
+E TQ+A L VD S R+IP+TLFG+FFE
Sbjct: 15319 TEPGCTQSATLDVDVSWCFRREIPKTLFGLFFE 15221
Score = 40.5 bits (82), Expect(7) = 7e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 456 GDQPCRSWWHMGRACQ*QRF 515
GDQPC SWW++G AC QR+
Sbjct: 14713 GDQPCGSWWNLGGAC*QQRY 14654
Score = 38.6 bits (78), Expect(6) = 2e-059
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -3 / +1
Query: 1049 PGNLKNRGFKSKSMDISSVRKPCP 978
PG +NRGFKS+S+ ++S+RKP P
Sbjct: 12820 PGKRRNRGFKSRSICMNSLRKPWP 12891
Score = 37.3 bits (75), Expect(7) = 7e-044
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3 / -2
Query: 843 IKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RHIQGTWF 989
++LDK R+ *N +NN QK S + *SS+ HA R+I G +
Sbjct: 13376 VRLDKGRTATSSSRDM*NFTT*SNNFQKGSHMV*SSVAHAFRYI*GALY 13230
Score = 36.8 bits (74), Expect(6) = 3e-030
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -2 / +2
Query: 975 VCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI* 844
+C+ RHE +LIKP +S F C +K * S S L + CP+*
Sbjct: 13244 ICI*RHERHLIKPYDSPFGSC*IKS*SSTCLVSY*LQFYPCPV* 13375
Score = 34.5 bits (69), Expect(6) = 3e-030
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = -2 / +3
Query: 1053 TSRKSQESWFQIQKHGYKFCAETMSL 976
++RK+ +SWFQIQKH ++ +T++L
Sbjct: 12816 STRKT*KSWFQIQKHMHELLTKTVAL 12893
Score = 31.8 bits (63), Expect(7) = 7e-044
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 708 EHRRWEGLQSRYVCSVPRNKGSNSF 782
EHRR E L S +VC + R G +SF
Sbjct: 13611 EHRRGENL*SSHVCQITRISGVDSF 13537
Score = 31.8 bits (63), Expect(7) = 7e-044
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -3
Query: 394 VDASPQLARKIPETLFGIFF 453
+DAS RKIP+TLFG+FF
Sbjct: 30991 LDAS*WPQRKIPKTLFGVFF 30932
Score = 31.8 bits (63), Expect(6) = 3e-030
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 525 SSFETSVTDKLCPYATSSCMVDLL 454
S+ TSV +KL P +TSS MVDLL
Sbjct: 14644 SNSSTSVANKLLPDSTSSRMVDLL 14715
Score = 27.6 bits (54), Expect(6) = 3e-030
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / +2
Query: 784 MKLLDPLFLGTEHT*RDCRPSHLLCS 707
+KL PL L HT* D R S LLCS
Sbjct: 13535 VKLSTPLILVI*HT*LDYRFSPLLCS 13612
>gb|CD231662.1|CD231662 SS1_22_F04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_22_F04_A012 5', mRNA sequence
Length = 720
Score = 236 bits (510), Expect(7) = 3e-092
Identities = 94/104 (90%), Positives = 98/104 (94%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 345 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 524
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIG 570
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIG
Sbjct: 525 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIG 656
Score = 226 bits (488), Expect(6) = 2e-082
Identities = 92/110 (83%), Positives = 97/110 (88%)
Frame = -2 / -2
Query: 567 NDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGINLE 388
NDGPRV+V*WSMRASSFETSV DKLCPYAT CMV+LLKKYPK CFRDLPGKLWRGINLE
Sbjct: 653 NDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGINLE 474
Query: 387 GCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
GCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 473 GCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 324
Score = 221 bits (476), Expect(6) = 9e-076
Identities = 94/104 (90%), Positives = 97/104 (93%)
Frame = -3 / -3
Query: 569 PMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTL 390
PMMDHGSMFDGV* PPASKPLLLTSSAHMPPAPAWLISSKNIPN+VSGIFRASCG ASTL
Sbjct: 655 PMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTL 476
Query: 389 RAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
R AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 475 RVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 344
Score = 218 bits (471), Expect(4) = 7e-069
Identities = 89/103 (86%), Positives = 92/103 (89%)
Frame = +3 / +2
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 347 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 526
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHW 569
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHW
Sbjct: 527 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHW 655
Score = 208 bits (448), Expect(4) = 2e-065
Identities = 89/103 (86%), Positives = 94/103 (91%)
Frame = -1 / -1
Query: 568 Q*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP* 389
Q*WTTG+CLMEYE LQLRNLCY*QALPICH+ LHG*SPQKISQ +FQGSSGQAVA HQP*
Sbjct: 654 Q*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP* 475
Query: 388 GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
GLLSGWPLF KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 474 GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*ASTCGK 346
Score = 110 bits (234), Expect(5) = 1e-050
Identities = 48/54 (88%), Positives = 49/54 (90%)
Frame = +2 / +1
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSL 568
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSL
Sbjct: 493 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSL 654
Score = 67.5 bits (141), Expect(5) = 1e-050
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 349 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 441
Score = 52.8 bits (109), Expect(7) = 3e-092
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +1 / +1
Query: 565 IGDDSSVFVATDRTSCFSRNIVA 633
+GDDSS+F+ATDRTSCFSRNIVA
Sbjct: 652 LGDDSSIFMATDRTSCFSRNIVA 720
Score = 47.8 bits (98), Expect(6) = 2e-082
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -3 / -2
Query: 632 ATMFRLKHDVRSVATNTEESSP 567
ATMFRLKHDVRSVA N EESSP
Sbjct: 719 ATMFRLKHDVRSVAMNIEESSP 654
Score = 43.7 bits (89), Expect(6) = 9e-076
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -2 / -1
Query: 633 SNNVSTET*CTISRHKHGGVIS 568
SNNVS ET*CTISRH++ GVIS
Sbjct: 720 SNNVSAET*CTISRHEYRGVIS 655
Score = 42.3 bits (86), Expect(4) = 7e-069
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 570 R*LLRVCGD*SYIMFQSKHCC 632
R*LL + GD*SYIMFQ KHCC
Sbjct: 657 R*LLYIHGD*SYIMFQPKHCC 719
Score = 41.8 bits (85), Expect(5) = 1e-050
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 569 EMTPPCLWRLIVHHVSVETLL 631
EMTP WRLIVHHVS ETLL
Sbjct: 656 EMTPLYSWRLIVHHVSAETLL 718
Score = 40.9 bits (83), Expect(6) = 2e-082
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 348 KH*CNECVMHPPSVASFPKQE 286
Score = 40.5 bits (82), Expect(4) = 2e-065
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 631 QQCFD*NMMYDQSPQTRRSHL 569
QQCF *NMMYDQSP RSHL
Sbjct: 718 QQCFG*NMMYDQSP*I*RSHL 656
Score = 40.0 bits (81), Expect(7) = 3e-092
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +2
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 293 FGKEATDGGCMTHSLH*CL 349
Score = 39.1 bits (79), Expect(7) = 3e-092
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 2 RRDPDARRLRHPIGLLPP 55
RRDPD RRLRH IGL PP
Sbjct: 89 RRDPDVRRLRHRIGLPPP 142
Score = 38.2 bits (77), Expect(6) = 9e-076
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 349 *ALMQ*VCHASTIRCLLSK 293
Score = 37.7 bits (76), Expect(4) = 2e-065
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 362 LPLVVSTNAMSVSCIHHPLPPFQSKK 285
Score = 37.3 bits (75), Expect(4) = 7e-069
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 285 LLALERRQRMVDA*HTHCISAY 350
Score = 34.5 bits (69), Expect(5) = 1e-050
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 286 FLLWKGGNGWWMHDTLIALVLTTSGS 363
Score = 30.4 bits (60), Expect(6) = 2e-082
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 99 RAGLRATEATRGVW 58
RA LRATE TRGVW
Sbjct: 181 RACLRATEGTRGVW 140
Score = 29.9 bits (59), Expect(6) = 2e-082
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 199 SKGRSDRATGCECRPGPAALK*KEEAKQ 116
SK RSD ATGC ALK*+++ K+
Sbjct: 298 SKARSDGATGCPDASARPALK*QKKKKK 215
Score = 29.9 bits (59), Expect(7) = 3e-092
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +3
Query: 99 ASLQSHCFASSFYLSAAGPGR 161
ASLQSHCFA F+ GR
Sbjct: 189 ASLQSHCFAFFFFFCYLSAGR 251
Score = 29.5 bits (58), Expect(7) = 3e-092
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 56 PHTPRVASVARSPAR 100
PHTPRV SVAR AR
Sbjct: 138 PHTPRVPSVARRHAR 182
Score = 27.6 bits (54), Expect(6) = 9e-076
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 160 RPGPAALK*KEEAKQWL*REA 98
RP K K++AKQWL*REA
Sbjct: 250 RPALK*QKKKKKAKQWL*REA 188
Score = 26.3 bits (51), Expect(6) = 2e-082
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 46 EAYRVPETAGVRVA 5
E Y VPETA VRVA
Sbjct: 133 ETYPVPETADVRVA 92
Score = 26.3 bits (51), Expect(6) = 9e-076
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 88 TGHGSHARGVG 56
TG+G HARGVG
Sbjct: 170 TGYGRHARGVG 138
Score = 24.9 bits (48), Expect(7) = 3e-092
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +3
Query: 135 YLSAAGPGRHSHPVARSLLPLD 200
YLSA HPVA SLL L+
Sbjct: 234 YLSAGRALASGHPVAPSLLALE 299
Score = 22.6 bits (43), Expect(4) = 2e-065
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1 / -2
Query: 208 FPKSKGRSDRATGCECRP 155
F K S R +GCEC P
Sbjct: 299 FQSKK*WSYRMSGCECPP 246
Score = 22.6 bits (43), Expect(6) = 9e-076
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 209 LPKIQRKK*SSYRM 168
LP Q KK* SYRM
Sbjct: 308 LPPFQSKK*WSYRM 267
Score = 22.1 bits (42), Expect(5) = 1e-050
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 269 SGSSITSCFG 298
Score = 22.1 bits (42), Expect(4) = 7e-069
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 268 IR*LHHFLLW 297
>gb|CX622776.1|CX622776 GABR1_65_H12.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_65_H12_A002 5', mRNA sequence
Length = 769
Score = 182 bits (391), Expect(3) = 1e-090
Identities = 73/89 (82%), Positives = 80/89 (89%)
Frame = +1 / +2
Query: 388 LKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSII 567
L V+ASPQ ARKIP+ +FGIFFEEINHAGAGG+WAELVSNRGFEAGG +TPSNIDPW II
Sbjct: 116 LSVNASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLII 295
Query: 568 GDDSSVFVATDRTSCFSRNIVALRMEVLC 654
GD+SS+ V TDRTSCF RN VALRMEVLC
Sbjct: 296 GDESSIIVGTDRTSCFERNPVALRMEVLC 382
Score = 142 bits (304), Expect(3) = 4e-062
Identities = 63/89 (70%), Positives = 69/89 (77%)
Frame = -3 / -2
Query: 656 SQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPP 477
+QRTSI AT R KHDVRSV T +SSPM+ HGS+ +GV PPAS PLLLTSSAH PP
Sbjct: 384 AQRTSIRSATGLRSKHDVRSVPTMILDSSPMISHGSILEGVLGPPASNPLLLTSSAHNPP 205
Query: 476 APAWLISSKNIPNSVSGIFRASCGEASTL 390
APAWLISSK IPN +SGIF A CGEA TL
Sbjct: 204 APAWLISSKKIPNILSGIFLAFCGEAFTL 118
Score = 102 bits (218), Expect(3) = 1e-090
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +1 / +2
Query: 661 CPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATITVS 837
CP+GGVGVYNPG+WGMNIE GK Y + ++++S +T LTVSLTSSDGLQ LA+ TIT S
Sbjct: 404 CPSGGVGVYNPGYWGMNIEKGKVYKVSLHIRSSDTVSLTVSLTSSDGLQKLAAHTITGS 580
Score = 90.4 bits (191), Expect(3) = 1e-090
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +1 / +2
Query: 844 SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISML 1014
+ WTK+E L + N SRLQ+TT+K GVVWLDQVS+MP DTY GHGFR +L SML
Sbjct: 593 AKWTKIEFHLRSNQNNTNSRLQLTTSKSGVVWLDQVSVMPMDTYMGHGFRKDLASML 763
Score = 89.5 bits (189), Expect(3) = 9e-031
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = -2 / -1
Query: 654 TEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATS 475
T++ HP+ N V+ + *C IS + I ND P +++ +R + E+SV KLCP TS
Sbjct: 382 TKNFHPKCNRVTFKA*CPISSNNDT*FIPNDQPWINIGRCIRPTGLESSVAYKLCPQPTS 203
Query: 474 SCMVDLLKKYPKQCFRDLPGKLWRGINLE 388
S MVDLL+K K RDLP LWRGI+ +
Sbjct: 202 SSMVDLLEKDTKHLIRDLPSILWRGIHTQ 116
Score = 88.1 bits (186), Expect(3) = 1e-027
Identities = 40/85 (47%), Positives = 51/85 (60%)
Frame = +3 / +1
Query: 399 CLATACPEDP*NTVWDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*L 578
CLAT C EDP* VW +F GDQPC SWW +GRAC+ QR R Y+ ++ + HW *+
Sbjct: 127 CLATEC*EDP**DVWYLFRGDQPCWSWWVVGRACKQQRIRGRWA*YTFQY*SMADHWG*I 306
Query: 579 LRVCGD*SYIMFQSKHCCSEDGGPL 653
C +*S IM + C+ DG L
Sbjct: 307 KYHCWN*SDIML*T*PGCTSDGSSL 381
Score = 76.2 bits (160), Expect(3) = 4e-062
Identities = 36/58 (62%), Positives = 39/58 (67%)
Frame = -3 / -2
Query: 830 VIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHS 657
V+V A FC PSELV ETV+ VS D L* FP SMFMPQ PGL*TPTPP G +
Sbjct: 573 VMV*AASFCRPSELVKETVKDTVSDDLICRLTL*TFPFSMFMPQ*PGL*TPTPPDGQA 400
Score = 61.1 bits (127), Expect(3) = 4e-062
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = -3 / -2
Query: 1013 SMDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQF 846
+++ S RKPCP+ VS G++DT*SSQTTP L VV *SL+++L L S FV F
Sbjct: 762 NIEARSFRKPCPM*VSIGITDT*SSQTTPLLLVVS*SLELVLFWLDLK*NSIFVHF 595
Score = 49.6 bits (102), Expect(3) = 9e-031
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = -2 / -1
Query: 1020 IQKHGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCP 850
I +H K +TM V V H *YLIKPN F C LKP* + +Q+ + CP
Sbjct: 769 IGQHRSKIFPKTMPHVSVHWHN*YLIKPNYPTFTCCKLKP*VGVILVGSQMKFYLCP 599
Score = 38.2 bits (77), Expect(3) = 1e-027
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3 / +1
Query: 897 IKASNNNEQKRSCLA*SSITHA*RHIQGTWFPHRT 1001
+KAS N+ K LA*SSI++A H+ G WF R+
Sbjct: 646 LKASTYNK*KWGSLA*SSISYANGHLHGAWFSERS 750
Score = 36.8 bits (74), Expect(3) = 1e-027
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3 / +1
Query: 675 CWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNN 830
CW L* LGHEH + +GL V R+ + F++KL W K S+++
Sbjct: 418 CWGL*SWLLGHEH*KRKGL*GEPAY*VIRHSVLDCFLDKLRWSTKTCCSHHH 573
Score = 34.5 bits (69), Expect(3) = 9e-031
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1 / -3
Query: 808 FATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQH 674
F H+SL K L L T + +P CSCP N Y+ QH
Sbjct: 551 FVDHRSLSRKQSRTLCLMT*YAGSPYKPFLFQCSCPSNQDYRPQH 417
>gb|BG556638.1|BG556638 EM1_37_G04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 450
Score = 286 bits (618), Expect(2) = 1e-081
Identities = 115/126 (91%), Positives = 120/126 (95%)
Frame = +1 / +1
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 73 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 252
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 253 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFS 432
Query: 619 RNIVAL 636
RNIVAL
Sbjct: 433 RNIVAL 450
Score = 269 bits (582), Expect(2) = 5e-077
Identities = 111/133 (83%), Positives = 118/133 (88%)
Frame = -2 / -1
Query: 636 QSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDL 457
QSNNVS ET*CTISRH++ GVISNDGPRV+V*WSMRASSFETSV DKLCPYAT CMV+L
Sbjct: 450 QSNNVSAET*CTISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNL 271
Query: 456 LKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHR 277
LKKYPK CFRDLPGKLWRGINLEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHR
Sbjct: 270 LKKYPK*CFRDLPGKLWRGINLEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHR 91
Query: 276 LPLAVGVGANAMS 238
LPL V A ++S
Sbjct: 90 LPLVVSTNAMSVS 52
Score = 267 bits (578), Expect(2) = 1e-075
Identities = 115/126 (91%), Positives = 118/126 (93%)
Frame = -3 / -2
Query: 635 RATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLIS 456
RATMFRLKHDVRSVATN EESSPMMDHGSMFDGV* PPASKPLLLTSSAHMPPAPAWLIS
Sbjct: 449 RATMFRLKHDVRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLIS 270
Query: 455 SKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIG 276
SKNIPN+VSGIFRASCG ASTLR AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIG
Sbjct: 269 SKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIG 90
Query: 275 FHLR*A 258
FHL *A
Sbjct: 89 FHLW*A 72
Score = 259 bits (561), Expect(2) = 5e-073
Identities = 107/125 (85%), Positives = 111/125 (88%)
Frame = +3 / +3
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 75 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 254
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQS 620
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL + GD*SYIMFQ
Sbjct: 255 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQP 434
Query: 621 KHCCS 635
KHCCS
Sbjct: 435 KHCCS 449
Score = 250 bits (540), Expect(2) = 3e-070
Identities = 107/125 (85%), Positives = 113/125 (90%)
Frame = -1 / -3
Query: 634 EQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SP 455
EQQCF *NMMYDQSP+ RSHLQ*WTTG+CLMEYE LQLRNLCY*QALPICH+ LHG*SP
Sbjct: 448 EQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SP 269
Query: 454 QKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*A 275
QKISQ +FQGSSGQAVA HQP*GLLSGWPLF KADICSP RIEAE RRL RR+A*DP*A
Sbjct: 268 QKISQIMFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*A 89
Query: 274 STCGR 260
STCG+
Sbjct: 88 STCGK 74
Score = 150 bits (323), Expect(3) = 3e-054
Identities = 66/76 (86%), Positives = 67/76 (88%)
Frame = +2 / +2
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 221 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 400
Query: 587 LWRLIVHHVSVETLLL 634
WRLIVHHVS ETLLL
Sbjct: 401 SWRLIVHHVSAETLLL 448
Score = 67.5 bits (141), Expect(3) = 3e-054
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +2
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 77 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 169
Score = 40.9 bits (83), Expect(2) = 5e-077
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 76 KH*CNECVMHPPSVASFPKQE 14
Score = 40.0 bits (81), Expect(2) = 1e-081
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +3
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 21 FGKEATDGGCMTHSLH*CL 77
Score = 38.2 bits (77), Expect(2) = 1e-075
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 77 *ALMQ*VCHASTIRCLLSK 21
Score = 37.7 bits (76), Expect(2) = 3e-070
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 90 LPLVVSTNAMSVSCIHHPLPPFQSKK 13
Score = 37.3 bits (75), Expect(2) = 5e-073
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 13 LLALERRQRMVDA*HTHCISAY 78
Score = 34.5 bits (69), Expect(3) = 3e-054
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 14 FLLWKGGNGWWMHDTLIALVLTTSGS 91
>gb|CD463169.1|CD463169 ETH1_42_E06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_E06_A002 5', mRNA sequence
Length = 548
Score = 286 bits (618), Expect(3) = 2e-081
Identities = 110/112 (98%), Positives = 111/112 (99%)
Frame = +1 / +1
Query: 856 KVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRF 1035
KVEQKLVAKGTNRTSRLQI TNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRF
Sbjct: 94 KVEQKLVAKGTNRTSRLQIKTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRF 273
Query: 1036 LRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
LRFPGGCFVEG+WLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL
Sbjct: 274 LRFPGGCFVEGEWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 429
Score = 251 bits (542), Expect(2) = 9e-071
Identities = 107/112 (95%), Positives = 108/112 (96%)
Frame = -3 / -1
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKS 1011
RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLS SPSTKQPPGNLKNRGFKSKS
Sbjct: 428 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSHSPSTKQPPGNLKNRGFKSKS 249
Query: 1010 MDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTF 855
MDISSVRKPCPLYVSSGMSDT*SS TTPFL V I*SL+VLLVPLATSFCSTF
Sbjct: 248 MDISSVRKPCPLYVSSGMSDT*SSHTTPFLLVFI*SLEVLLVPLATSFCSTF 93
Score = 248 bits (536), Expect(3) = 2e-069
Identities = 104/113 (92%), Positives = 107/113 (94%)
Frame = +2 / +2
Query: 854 QKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTRDMVSAQNLYPCFWI*NHD 1033
QKWSRSWLLKEPIE QGFK*+ TKKEL+GLIKYHSCLKTHTRDMVSAQNLYPCFWI*NH
Sbjct: 92 QKWSRSWLLKEPIEPQGFK*KLTKKELYGLIKYHSCLKTHTRDMVSAQNLYPCFWI*NHG 271
Query: 1034 S*DFLEVVL*KVTG*EMHSDGENQLVHGKRGLDTSGMFGITGLMMGLDIMSSF 1192
S*DFLEVVL*KV+G*EMHSDGEN LVHGKRGLDT GMFGITGLMMGLDIMS F
Sbjct: 272 S*DFLEVVL*KVSG*EMHSDGENLLVHGKRGLDTLGMFGITGLMMGLDIMSFF 430
Score = 247 bits (534), Expect(2) = 8e-069
Identities = 103/112 (91%), Positives = 106/112 (94%)
Frame = -2 / -3
Query: 1191 KELIISKPIISPVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQESWFQIQK 1012
K+LIISKPIISPVMPNIP+VSRPLFPWTN FSPSECIS*P+TFYKTTSRKSQE WFQIQK
Sbjct: 429 KKLIISKPIISPVMPNIPKVSRPLFPWTNRFSPSECIS*PLTFYKTTSRKSQEPWFQIQK 250
Query: 1011 HGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHF 856
HGYKFCAETMSLVCVFRHE*YLIKP NSFFV YLKP* SIGSFSNQLLLHF
Sbjct: 249 HGYKFCAETMSLVCVFRHE*YLIKPYNSFFVSFYLKP*GSIGSFSNQLLLHF 94
Score = 242 bits (522), Expect(2) = 6e-067
Identities = 104/113 (92%), Positives = 106/113 (93%)
Frame = -1 / -2
Query: 1192 EGTHNIQAHHQSSNAKHPRSVQASLPMDQLILSI*MHFLASHLLQNNLQEISRIVVSNPK 1013
E THNIQAHHQSSNAKHP+SVQASLPMDQ ILSI*MHFLA+HLLQNNLQEISR VVSNPK
Sbjct: 430 EETHNIQAHHQSSNAKHPQSVQASLPMDQ*ILSI*MHFLATHLLQNNLQEISRTVVSNPK 251
Query: 1012 AWI*VLCGNHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLL 854
AWI*VLCGNHVPCMCLQA*VILDQA QLLFC LFEAL FYWFL*QPASAPLL
Sbjct: 250 AWI*VLCGNHVPCMCLQA*VILDQAIQLLFC*FLFEALRFYWFL*QPASAPLL 92
Score = 223 bits (482), Expect = 4e-057
Identities = 92/116 (79%), Positives = 101/116 (87%)
Frame = +3 / +3
Query: 798 WVAKLGFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RHIQ 977
W G+ +++ + L KSGAEAGC*RNQ*N+KASN N QKRSC+A*SSITHA*RHIQ
Sbjct: 36 WKGGNGWWMHDTLIALVLTKSGAEAGC*RNQ*NLKASNKN*QKRSCMA*SSITHA*RHIQ 215
Query: 978 GTWFPHRTYIHAFGFETTILEISWRLFCRR*LAKKCIQMERINWSMGREAWTLRGC 1145
GTWFPHRTYIHAFGFETT+LEISWRLFCRR*+AKKCIQMERI WSMGREAWTL GC
Sbjct: 216 GTWFPHRTYIHAFGFETTVLEISWRLFCRR*VAKKCIQMERIYWSMGREAWTLWGC 383
Score = 40.9 bits (83), Expect(2) = 9e-071
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 89 KH*CNECVMHPPSVASFPKQE 27
Score = 40.0 bits (81), Expect(3) = 2e-081
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +1
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 34 FGKEATDGGCMTHSLH*CL 90
Score = 38.2 bits (77), Expect(2) = 8e-069
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 90 *ALMQ*VCHASTIRCLLSK 34
Score = 37.3 bits (75), Expect(2) = 6e-067
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2 / -2
Query: 258 VGANAMSVSCIRRPMPPSQNPK 193
V NAMSVSCI P+PP Q+ K
Sbjct: 91 VSTNAMSVSCIHHPLPPFQSKK 26
Score = 37.3 bits (75), Expect(3) = 2e-069
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 26 LLALERRQRMVDA*HTHCISAY 91
Score = 22.1 bits (42), Expect(3) = 2e-069
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 10 SGSSITSCFG 39
Score = 22.1 bits (42), Expect(3) = 2e-081
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 9 IR*LHHFLLW 38
>gb|BF657255.1|BF657255 OV2_22_E11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 513
Score = 296 bits (640), Expect = 6e-079
Identities = 113/115 (98%), Positives = 114/115 (99%)
Frame = +1 / +3
Query: 847 NWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLK 1026
NWTKVEQKLVAKGTNRTSRLQI TNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLK
Sbjct: 3 NWTKVEQKLVAKGTNRTSRLQIKTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLK 182
Query: 1027 PRFLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
PRFLRFPGGCFVEG+WLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL
Sbjct: 183 PRFLRFPGGCFVEGEWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 347
Score = 258 bits (557), Expect = 2e-067
Identities = 110/115 (95%), Positives = 111/115 (96%)
Frame = -3 / -3
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKS 1011
RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLS SPSTKQPPGNLKNRGFKSKS
Sbjct: 346 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSHSPSTKQPPGNLKNRGFKSKS 167
Query: 1010 MDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQF 846
MDISSVRKPCPLYVSSGMSDT*SS TTPFL V I*SL+VLLVPLATSFCSTFVQF
Sbjct: 166 MDISSVRKPCPLYVSSGMSDT*SSHTTPFLLVFI*SLEVLLVPLATSFCSTFVQF 2
Score = 256 bits (554), Expect = 4e-067
Identities = 106/115 (92%), Positives = 109/115 (94%)
Frame = -2 / -2
Query: 1191 KELIISKPIISPVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQESWFQIQK 1012
K+LIISKPIISPVMPNIP+VSRPLFPWTN FSPSECIS*P+TFYKTTSRKSQE WFQIQK
Sbjct: 347 KKLIISKPIISPVMPNIPKVSRPLFPWTNRFSPSECIS*PLTFYKTTSRKSQEPWFQIQK 168
Query: 1011 HGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI 847
HGYKFCAETMSLVCVFRHE*YLIKP NSFFV YLKP* SIGSFSNQLLLHFCPI
Sbjct: 167 HGYKFCAETMSLVCVFRHE*YLIKPYNSFFVSFYLKP*GSIGSFSNQLLLHFCPI 3
Score = 255 bits (551), Expect = 1e-066
Identities = 107/116 (92%), Positives = 110/116 (94%)
Frame = +2 / +1
Query: 845 QIGQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTRDMVSAQNLYPCFWI* 1024
QIGQKWSRSWLLKEPIE QGFK*+ TKKEL+GLIKYHSCLKTHTRDMVSAQNLYPCFWI*
Sbjct: 1 QIGQKWSRSWLLKEPIEPQGFK*KLTKKELYGLIKYHSCLKTHTRDMVSAQNLYPCFWI* 180
Query: 1025 NHDS*DFLEVVL*KVTG*EMHSDGENQLVHGKRGLDTSGMFGITGLMMGLDIMSSF 1192
NH S*DFLEVVL*KV+G*EMHSDGEN LVHGKRGLDT GMFGITGLMMGLDIMS F
Sbjct: 181 NHGS*DFLEVVL*KVSG*EMHSDGENLLVHGKRGLDTLGMFGITGLMMGLDIMSFF 348
Score = 248 bits (536), Expect = 1e-064
Identities = 107/116 (92%), Positives = 109/116 (93%)
Frame = -1 / -1
Query: 1192 EGTHNIQAHHQSSNAKHPRSVQASLPMDQLILSI*MHFLASHLLQNNLQEISRIVVSNPK 1013
E THNIQAHHQSSNAKHP+SVQASLPMDQ ILSI*MHFLA+HLLQNNLQEISR VVSNPK
Sbjct: 348 EETHNIQAHHQSSNAKHPQSVQASLPMDQ*ILSI*MHFLATHLLQNNLQEISRTVVSNPK 169
Query: 1012 AWI*VLCGNHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNL 845
AWI*VLCGNHVPCMCLQA*VILDQA QLLFC LFEAL FYWFL*QPASAPLLSNL
Sbjct: 168 AWI*VLCGNHVPCMCLQA*VILDQAIQLLFC*FLFEALRFYWFL*QPASAPLLSNL 1
Score = 226 bits (489), Expect = 4e-058
Identities = 92/100 (92%), Positives = 96/100 (96%)
Frame = +3 / +2
Query: 846 KLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RHIQGTWFPHRTYIHAFGFE 1025
KLDKSGAEAGC*RNQ*N+KASN N QKRSC+A*SSITHA*RHIQGTWFPHRTYIHAFGFE
Sbjct: 2 KLDKSGAEAGC*RNQ*NLKASNKN*QKRSCMA*SSITHA*RHIQGTWFPHRTYIHAFGFE 181
Query: 1026 TTILEISWRLFCRR*LAKKCIQMERINWSMGREAWTLRGC 1145
TT+LEISWRLFCRR*+AKKCIQMERI WSMGREAWTL GC
Sbjct: 182 TTVLEISWRLFCRR*VAKKCIQMERIYWSMGREAWTLWGC 301
>gb|BI098360.1|BI098360 IP1_31_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 483
Score = 264 bits (571), Expect(4) = 7e-079
Identities = 106/119 (89%), Positives = 111/119 (93%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 99 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 278
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCF 615
FGIFFEEINHAGAGGIWAELV+NRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRT F
Sbjct: 279 FGIFFEEINHAGAGGIWAELVNNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTIMF 455
Score = 247 bits (533), Expect(4) = 2e-074
Identities = 101/122 (82%), Positives = 108/122 (88%)
Frame = -2 / -2
Query: 603 TISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRD 424
TISRH++ GVISNDGPRV+V*WSMRASSFETSV DKLCPYAT CMV+LLKKYPK CFRD
Sbjct: 443 TISRHEYRGVISNDGPRVNV*WSMRASSFETSVIDKLCPYATGPCMVNLLKKYPK*CFRD 264
Query: 423 LPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANA 244
LPGKLWRGINLEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V A +
Sbjct: 263 LPGKLWRGINLEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMS 84
Query: 243 MS 238
+S
Sbjct: 83 VS 78
Score = 243 bits (525), Expect(4) = 4e-071
Identities = 105/116 (90%), Positives = 108/116 (93%)
Frame = -3 / -3
Query: 605 VRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSG 426
VRSVATN EESSPMMDHGSMFDGV* PPASKPLLLTSSAHMPPAPAWLISSKNIPN+VSG
Sbjct: 445 VRSVATNIEESSPMMDHGSMFDGV*GPPASKPLLLTSSAHMPPAPAWLISSKNIPNNVSG 266
Query: 425 IFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
IFRASCG ASTLR AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 265 IFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 98
Score = 235 bits (507), Expect(4) = 7e-069
Identities = 98/115 (85%), Positives = 102/115 (88%)
Frame = +3 / +2
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 101 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 280
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SY 605
WDIF*GD PCR WHMGRACQ*QRFRSWR SYSIKH PVVHHWR*LL + GD*SY
Sbjct: 281 WDIF*GD*PCRGRWHMGRACQ*QRFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SY 445
Score = 229 bits (494), Expect(2) = 6e-064
Identities = 98/115 (85%), Positives = 104/115 (90%)
Frame = -1 / -1
Query: 604 YDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQG 425
YDQSP+ RSHLQ*WTTG+CLMEYE LQLRNLCY*QALPICH+ LHG*SPQKISQ +FQG
Sbjct: 444 YDQSPRI*RSHLQ*WTTGQCLMEYEGLQLRNLCY*QALPICHRPLHG*SPQKISQIMFQG 265
Query: 424 SSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
SSGQAVA HQP*GLLSGWPLF KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 264 SSGQAVAWHQP*GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*ASTCGK 100
Score = 129 bits (277), Expect(4) = 9e-050
Identities = 57/66 (86%), Positives = 58/66 (87%)
Frame = +2 / +1
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TEVSKLEALILHQT TRGPSLEMTP
Sbjct: 247 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITEVSKLEALILHQTLTRGPSLEMTPLY 426
Query: 587 LWRLIV 604
WRLIV
Sbjct: 427 SWRLIV 444
Score = 67.5 bits (141), Expect(4) = 9e-050
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 103 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 195
Score = 40.9 bits (83), Expect(4) = 2e-074
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 102 KH*CNECVMHPPSVASFPKQE 40
Score = 40.0 bits (81), Expect(4) = 7e-079
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +2
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 47 FGKEATDGGCMTHSLH*CL 103
Score = 38.2 bits (77), Expect(4) = 4e-071
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 103 *ALMQ*VCHASTIRCLLSK 47
Score = 37.7 bits (76), Expect(2) = 6e-064
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 116 LPLVVSTNAMSVSCIHHPLPPFQSKK 39
Score = 37.3 bits (75), Expect(4) = 7e-069
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 39 LLALERRQRMVDA*HTHCISAY 104
Score = 34.5 bits (69), Expect(4) = 9e-050
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 40 FLLWKGGNGWWMHDTLIALVLTTSGS 117
Score = 27.6 bits (54), Expect(4) = 7e-079
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 606 IMFQSKHCCS 635
IMFQ KHCCS
Sbjct: 447 IMFQPKHCCS 476
Score = 27.2 bits (53), Expect(4) = 2e-074
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 635 RATMFRLKHD 606
RATMFRLKHD
Sbjct: 476 RATMFRLKHD 447
Score = 25.8 bits (50), Expect(4) = 7e-069
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 607 SCFSRNIVAL 636
SCFSRNIVAL
Sbjct: 448 SCFSRNIVAL 477
Score = 24.0 bits (46), Expect(4) = 9e-050
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 605 HHVSVETLLL 634
HHVS ETLLL
Sbjct: 446 HHVSAETLLL 475
Score = 24.0 bits (46), Expect(4) = 2e-074
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 199 SKGRSDRATGC 167
SK RSD ATGC
Sbjct: 52 SKARSDGATGC 20
Score = 24.0 bits (46), Expect(4) = 4e-071
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 634 EQQCFD*NMM 605
EQQCF *NMM
Sbjct: 475 EQQCFG*NMM 446
Score = 22.6 bits (43), Expect(4) = 4e-071
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 209 LPKIQRKK*SSYRM 168
LP Q KK* SYRM
Sbjct: 62 LPPFQSKK*WSYRM 21
Score = 22.1 bits (42), Expect(4) = 7e-069
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 22 IR*LHHFLLW 51
Score = 22.1 bits (42), Expect(4) = 7e-079
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 23 SGSSITSCFG 52
>gb|BG560033.1|BG560033 RHIZ2_68_F03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 489
Score = 265 bits (574), Expect = 7e-070
Identities = 105/128 (82%), Positives = 113/128 (88%)
Frame = +1 / +1
Query: 289 KQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINH 468
K A+ I C L LFC+GC+C SE+EATQTA L VDASPQLARKIP+TLFGIFFEEINH
Sbjct: 106 KDAAPRAILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFEEINH 285
Query: 469 AGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEV 648
AGAGGIWAELVSNRGFEAGG HTPSNIDPWSIIGDDSS++V TDRTSCFSRNI+ALRMEV
Sbjct: 286 AGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSIYVETDRTSCFSRNIIALRMEV 465
Query: 649 LCDECPAG 672
LCD CP G
Sbjct: 466 LCDNCPTG 489
Score = 240 bits (518), Expect(2) = 1e-062
Identities = 102/128 (79%), Positives = 110/128 (85%)
Frame = -3 / -2
Query: 671 PAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSS 492
P G SQRTSILRA MFRLKHDVRSV+T EESSPMMDHGSMFDGV PPASKPLLLTSS
Sbjct: 488 PVGQLSQRTSILRAMMFRLKHDVRSVSTYIEESSPMMDHGSMFDGVWRPPASKPLLLTSS 309
Query: 491 AHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
AHMPPAPAWLISSK IPNSVSGIFRASCGEAST+R AVWVAS S+ RHLQP QNR+++Q+
Sbjct: 308 AHMPPAPAWLISSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQNRNKKQR 129
Query: 311 IVPEEACL 288
+ A L
Sbjct: 128 MARGAASL 105
Score = 197 bits (425), Expect = 3e-049
Identities = 80/115 (69%), Positives = 86/115 (74%)
Frame = +3 / +3
Query: 327 SILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWDIF*GDQPCRSWWHMGRACQ* 506
S+L LQM GHPD P G CLA AC EDP* T+WD+ *GDQPCRSWWHMG C *
Sbjct: 144 SVLLRLQMPGIRVGGHPDGDPHGRCLAAACSEDP*YTIWDLL*GDQPCRSWWHMG*TC** 323
Query: 507 QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSW 671
QRF SWR YSIKH P+VHHWR*L +CGD*S IMFQSKH CSEDGGPL *+S W
Sbjct: 324 QRF*SWRPPYSIKH*PMVHHWR*LFYICGD*SDIMFQSKHHCSEDGGPLR*LSYW 488
Score = 184 bits (397), Expect = 2e-045
Identities = 79/119 (66%), Positives = 89/119 (74%)
Frame = -1 / -3
Query: 670 QLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QAL 491
Q D++ +GPPSSEQ CFD*NMM DQSP +SHLQ*WT G+CLMEY LQL+NLCY*Q
Sbjct: 487 Q*DSYRKGPPSSEQ*CFD*NMMSDQSPHI*KSHLQ*WTMGQCLMEYGGLQLQNLCY*QVQ 308
Query: 490 PICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGR 314
PICHQLLHG*SPQ+ SQ V+QGSS QA ARH+P*G SGWP ICS + E R
Sbjct: 307 PICHQLLHG*SPQRRSQIVYQGSSEQAAARHRP*GSPSGWPPTLMPGICSLSKTETRSR 131
Score = 179 bits (385), Expect = 8e-044
Identities = 85/128 (66%), Positives = 97/128 (75%)
Frame = -2 / -1
Query: 672 TSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKL 493
TS T+I +DLHPQSN+VSTET*C IS H + VISNDGP V+V*WSM ASSF+TSVT+K
Sbjct: 489 TSRTVIAKDLHPQSNDVSTET*CPISLHIYRRVISNDGPWVNV*WSMEASSFKTSVTNKF 310
Query: 492 CPYATSSCMVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAE 313
PYATSSCMVDLLK+ PK C RDLP KL RGI+ EG LGGL AA A+ KQ+AE
Sbjct: 309 SPYATSSCMVDLLKEDPK*CIRDLPSKLRRGIDREGRRLGGLQL*CQAFAA*AKQKQEAE 130
Query: 312 DCTRGGLL 289
D RG +L
Sbjct: 129 DGARGCVL 106
Score = 129 bits (276), Expect = 9e-029
Identities = 61/79 (77%), Positives = 63/79 (79%)
Frame = +2 / +2
Query: 410 SLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPCL 589
SL GRSL H LG LRRSTMQELVAYG +L VTEV KLEA ILHQT T GPSLEMT +
Sbjct: 227 SLLGRSLIHYLGSSLRRSTMQELVAYGLNLLVTEVLKLEASILHQTLTHGPSLEMTLLYM 406
Query: 590 WRLIVHHVSVETLLL*GWR 646
WRLI HHVSVET LL*GWR
Sbjct: 407 WRLIGHHVSVETSLL*GWR 463
Score = 22.6 bits (43), Expect(2) = 1e-062
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1 / -1
Query: 238 CVMHPTSDASFP 203
C+ HP DAS P
Sbjct: 54 CIHHPKEDASSP 19
>gb|BG322938.1|BG322938 EM1_15_H09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 189 bits (408), Expect(6) = 4e-066
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +1 / +1
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 259 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 438
Query: 439 FGIFFEEINHAGAGGIWAELVSNRG 513
FGIFFEEINHAGAGGIWAELV+NRG
Sbjct: 439 FGIFFEEINHAGAGGIWAELVNNRG 513
Score = 186 bits (400), Expect(4) = 6e-064
Identities = 75/92 (81%), Positives = 79/92 (85%)
Frame = -2 / -1
Query: 513 TSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHA 334
TSV DKLCPYAT CMV+LLKKYPK CFRDLPGKLWRGINLEGCCLGGLYF RPTSAAH
Sbjct: 513 TSVIDKLCPYATGPCMVNLLKKYPK*CFRDLPGKLWRGINLEGCCLGGLYF*RPTSAAHT 334
Query: 333 E*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 333 E*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 238
Score = 177 bits (382), Expect(4) = 1e-056
Identities = 76/85 (89%), Positives = 79/85 (92%)
Frame = -3 / -2
Query: 512 PLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQ 333
PLLLTSSAHMPPAPAWLISSKNIPN+VSGIFRASCG ASTLR AVWVASIS+GRHLQPTQ
Sbjct: 512 PLLLTSSAHMPPAPAWLISSKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQ 333
Query: 332 NRSRRQKIVPEEACLRSIGFHLR*A 258
NRSR QKIV E+ CLRSIGFHL *A
Sbjct: 332 NRSRTQKIVVEKDCLRSIGFHLW*A 258
Score = 173 bits (373), Expect(3) = 2e-048
Identities = 72/84 (85%), Positives = 75/84 (89%)
Frame = +3 / +3
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 261 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 440
Query: 441 WDIF*GDQPCRSWWHMGRACQ*QR 512
WDIF*GD PCR WHMGRACQ*QR
Sbjct: 441 WDIF*GD*PCRGRWHMGRACQ*QR 512
Score = 165 bits (355), Expect(4) = 5e-048
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = -1 / -3
Query: 511 LCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRR 332
LCY*QALPICH+ LHG*SPQKISQ +FQGSSGQAVA HQP*GLLSGWPLF KADICSP R
Sbjct: 511 LCY*QALPICHRPLHG*SPQKISQIMFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHR 332
Query: 331 IEAEGRRLYQRRLA*DP*ASTCGR 260
IEAE RRL RR+A*DP*ASTCG+
Sbjct: 331 IEAERRRL**RRIA*DP*ASTCGK 260
Score = 71.2 bits (149), Expect(4) = 5e-032
Identities = 30/35 (85%), Positives = 31/35 (88%)
Frame = +2 / +2
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTE 511
HSLPGRSLKH LGYFLRR TMQ VAYGQSLS+TE
Sbjct: 407 HSLPGRSLKHYLGYFLRRLTMQGPVAYGQSLSITE 511
Score = 67.5 bits (141), Expect(4) = 5e-032
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +2
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 263 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 355
Score = 46.9 bits (96), Expect(4) = 6e-064
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1 / -2
Query: 139 K*KEEAKQWL*REARRATGHGSHARGVG 56
K K++AKQWL*REA TG+G HARGVG
Sbjct: 137 KKKKKAKQWL*REACVPTGYGRHARGVG 54
Score = 40.9 bits (83), Expect(4) = 6e-064
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 262 KH*CNECVMHPPSVASFPKQE 200
Score = 40.5 bits (82), Expect(4) = 1e-056
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 111 FEGKRAGLRATEATRGVW 58
FEGKRA LRATE TRGVW
Sbjct: 109 FEGKRACLRATEGTRGVW 56
Score = 40.0 bits (81), Expect(6) = 4e-066
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +3
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 207 FGKEATDGGCMTHSLH*CL 263
Score = 38.2 bits (77), Expect(4) = 1e-056
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 263 *ALMQ*VCHASTIRCLLSK 207
Score = 37.7 bits (76), Expect(4) = 5e-048
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 276 LPLVVSTNAMSVSCIHHPLPPFQSKK 199
Score = 37.3 bits (75), Expect(3) = 2e-048
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 199 LLALERRQRMVDA*HTHCISAY 264
Score = 34.5 bits (69), Expect(4) = 5e-032
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 200 FLLWKGGNGWWMHDTLIALVLTTSGS 277
Score = 32.2 bits (64), Expect(6) = 4e-066
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 56 PHTPRVASVARSPARF 103
PHTPRV SVAR ARF
Sbjct: 54 PHTPRVPSVARRHARF 101
Score = 31.3 bits (62), Expect(6) = 4e-066
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 2 RRDPDARRLRHPIGLLPP 55
R + D RRLRH IGL PP
Sbjct: 5 RHEADVRRLRHRIGLPPP 58
Score = 29.9 bits (59), Expect(4) = 6e-064
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 199 SKGRSDRATGCECRPGPAALK*KEEAKQ 116
SK RSD ATGC ALK*+++ K+
Sbjct: 212 SKARSDGATGCPDASARPALK*QKKKKK 129
Score = 28.6 bits (56), Expect(6) = 4e-066
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +1
Query: 87 VARRASLQSHCFASSFY 137
V ASLQSHCFA F+
Sbjct: 85 VGTHASLQSHCFAFFFF 135
Score = 24.9 bits (48), Expect(6) = 4e-066
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +1
Query: 135 YLSAAGPGRHSHPVARSLLPLD 200
YLSA HPVA SLL L+
Sbjct: 148 YLSAGRALASGHPVAPSLLALE 213
Score = 24.0 bits (46), Expect(4) = 5e-048
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 110 LKGSAPGYGPRKPRE 66
LKGS YG RK RE
Sbjct: 108 LKGSVRAYGLRKARE 64
Score = 22.6 bits (43), Expect(4) = 5e-048
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1 / -1
Query: 208 FPKSKGRSDRATGCECRP 155
F K S R +GCEC P
Sbjct: 213 FQSKK*WSYRMSGCECPP 160
Score = 22.6 bits (43), Expect(4) = 1e-056
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 209 LPKIQRKK*SSYRM 168
LP Q KK* SYRM
Sbjct: 222 LPPFQSKK*WSYRM 181
Score = 22.1 bits (42), Expect(3) = 2e-048
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 182 IR*LHHFLLW 211
Score = 22.1 bits (42), Expect(4) = 5e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 183 SGSSITSCFG 212
>gb|BI075789.1|BI075789 IP1_21_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 577
Score = 223 bits (481), Expect = 5e-057
Identities = 90/110 (81%), Positives = 98/110 (89%)
Frame = +1 / +1
Query: 649 LCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATI 828
LC++CPAGGVG+YNPGFWGMNIEDGKAYNLVMYV+SP+ LTVSLTSSDGLQNLAS I
Sbjct: 1 LCNDCPAGGVGIYNPGFWGMNIEDGKAYNLVMYVKSPKNTCLTVSLTSSDGLQNLASVNI 180
Query: 829 TVSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYK 978
V+G S W KVE+KLVAKGTNRTSRLQIT+ KKGVVW DQVSLMP DTYK
Sbjct: 181 IVAGKSKWIKVEKKLVAKGTNRTSRLQITSKKKGVVWFDQVSLMPADTYK 330
Score = 180 bits (387), Expect = 4e-044
Identities = 78/109 (71%), Positives = 89/109 (81%)
Frame = -3 / -3
Query: 977 LYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPETVIVAEAKFCNP 798
LYVS+GMSDT S+ TTPF VI*SL+VLLVPLAT+F STF+ FD P T+++ EA+FCNP
Sbjct: 329 LYVSAGMSDTWSNHTTPFFLDVI*SLEVLLVPLATNFFSTFIHFDFPATIMLTEARFCNP 150
Query: 797 SELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQ 651
SELV+ETV+ GD TYITRL AFPSSMFMPQ PGL* PTPPAG S Q
Sbjct: 149 SELVSETVKHVFFGDLTYITRLYAFPSSMFMPQNPGL*MPTPPAGQSLQ 3
Score = 178 bits (384), Expect = 1e-043
Identities = 75/110 (68%), Positives = 85/110 (77%)
Frame = -2 / -2
Query: 978 LVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARNCYCS*SQVLQP 799
LVCV RHE*YL+KP+NSF +RCYLKP* SI SFSNQLLLH P+ N Y + SQ+LQP
Sbjct: 330 LVCVCRHE*YLVKPHNSFLLRCYLKP*GSISSFSNQLLLHLYPLRLPCNYYVNGSQILQP 151
Query: 798 IRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITE 649
I AC**NC FW LNIHN IV LPIFYVHAP++WV+N NTT W +I E
Sbjct: 150 I*AC**NCQACIFWRLNIHN*IVCLPIFYVHAPESWVVNANTTGWAVIAE 1
Score = 155 bits (332), Expect = 2e-036
Identities = 67/108 (62%), Positives = 79/108 (73%)
Frame = +3 / +3
Query: 657 *VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNNSF 836
*+ S WCW L PR LGHEHRRWEG+QS YVC V + +SF NKL WVAK GF +NS
Sbjct: 9 *LPSRWCWHLQPRILGHEHRRWEGIQSSYVC*VAKKYMLDSFTNKLRWVAKSGFR*HNSC 188
Query: 837 WHIKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RHIQG 980
+++DK G E GC*RN *N+KASNN ++RSC+ * SITHA RHIQG
Sbjct: 189 REVEVDKGGEEVGC*RN**NLKASNNI*EERSCVV*PSITHACRHIQG 332
Score = 153 bits (329), Expect = 4e-036
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -1 / -1
Query: 988 NHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL*LKPS 809
++ PCMCLQA*VIL Q QLL +LFEAL FY FL*QP S+P LS +LL * KP
Sbjct: 340 HNTPCMCLQA*VILGQTTQLLSS*MLFEALRFY*FL*QPTSSPPLSTSTSLQLLC*RKPD 161
Query: 808 FATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHR 650
FATH SLL+KL FL T HT* DC PSHLLCSCP+ LG K QHH+L +H R
Sbjct: 160 FATHLSLLVKLSSMYFLAT*HT*LDCMPSHLLCSCPRILGCKCQHHRLGSHCR 2
Score = 139 bits (299), Expect = 6e-032
Identities = 66/99 (66%), Positives = 70/99 (70%)
Frame = +2 / +2
Query: 683 FITQVFGA*T*KMGRPTISLCMFSPQKQRI*QFH*QALMGCKTWLQLQ*QFLAHQIGQKW 862
F TQ GA*T*KMGR TI LCM S QK *QFH*QA MGCK WL L * + G +W
Sbjct: 35 FTTQDSGA*T*KMGRHTI*LCMLSRQKIHA*QFH*QAQMGCKIWLPLT**LQGSRSG*RW 214
Query: 863 SRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTR 979
RSWLLKE IE QGFK* +KEL GL KYHSCL+THTR
Sbjct: 215 RRSWLLKELIEPQGFK*HLRRKELCGLTKYHSCLQTHTR 331
>gb|BI075931.1|BI075931 IP1_23_B05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 376
Score = 223 bits (481), Expect = 5e-057
Identities = 90/110 (81%), Positives = 98/110 (89%)
Frame = +1 / +1
Query: 649 LCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATI 828
LC++CPAGGVG+YNPGFWGMNIEDGKAYNLVMYV+SP+ LTVSLTSSDGLQNLAS I
Sbjct: 1 LCNDCPAGGVGIYNPGFWGMNIEDGKAYNLVMYVKSPKNTCLTVSLTSSDGLQNLASVNI 180
Query: 829 TVSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYK 978
V+G S W KVE+KLVAKGTNRTSRLQIT+ KKGVVW DQVSLMP DTYK
Sbjct: 181 IVAGKSKWIKVEKKLVAKGTNRTSRLQITSKKKGVVWFDQVSLMPADTYK 330
Score = 180 bits (387), Expect = 4e-044
Identities = 78/109 (71%), Positives = 89/109 (81%)
Frame = -3 / -3
Query: 977 LYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPETVIVAEAKFCNP 798
LYVS+GMSDT S+ TTPF VI*SL+VLLVPLAT+F STF+ FD P T+++ EA+FCNP
Sbjct: 329 LYVSAGMSDTWSNHTTPFFLDVI*SLEVLLVPLATNFFSTFIHFDFPATIMLTEARFCNP 150
Query: 797 SELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQ 651
SELV+ETV+ GD TYITRL AFPSSMFMPQ PGL* PTPPAG S Q
Sbjct: 149 SELVSETVKHVFFGDLTYITRLYAFPSSMFMPQNPGL*MPTPPAGQSLQ 3
Score = 178 bits (384), Expect = 1e-043
Identities = 75/110 (68%), Positives = 85/110 (77%)
Frame = -2 / -2
Query: 978 LVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARNCYCS*SQVLQP 799
LVCV RHE*YL+KP+NSF +RCYLKP* SI SFSNQLLLH P+ N Y + SQ+LQP
Sbjct: 330 LVCVCRHE*YLVKPHNSFLLRCYLKP*GSISSFSNQLLLHLYPLRLPCNYYVNGSQILQP 151
Query: 798 IRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITE 649
I AC**NC FW LNIHN IV LPIFYVHAP++WV+N NTT W +I E
Sbjct: 150 I*AC**NCQACIFWRLNIHN*IVCLPIFYVHAPESWVVNANTTGWAVIAE 1
Score = 155 bits (332), Expect = 2e-036
Identities = 67/108 (62%), Positives = 79/108 (73%)
Frame = +3 / +3
Query: 657 *VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNNSF 836
*+ S WCW L PR LGHEHRRWEG+QS YVC V + +SF NKL WVAK GF +NS
Sbjct: 9 *LPSRWCWHLQPRILGHEHRRWEGIQSSYVC*VAKKYMLDSFTNKLRWVAKSGFR*HNSC 188
Query: 837 WHIKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RHIQG 980
+++DK G E GC*RN *N+KASNN ++RSC+ * SITHA RHIQG
Sbjct: 189 REVEVDKGGEEVGC*RN**NLKASNNI*EERSCVV*PSITHACRHIQG 332
Score = 153 bits (329), Expect = 4e-036
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -1 / -1
Query: 988 NHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL*LKPS 809
++ PCMCLQA*VIL Q QLL +LFEAL FY FL*QP S+P LS +LL * KP
Sbjct: 340 HNTPCMCLQA*VILGQTTQLLSS*MLFEALRFY*FL*QPTSSPPLSTSTSLQLLC*RKPD 161
Query: 808 FATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHR 650
FATH SLL+KL FL T HT* DC PSHLLCSCP+ LG K QHH+L +H R
Sbjct: 160 FATHLSLLVKLSSMYFLAT*HT*LDCMPSHLLCSCPRILGCKCQHHRLGSHCR 2
Score = 139 bits (299), Expect = 6e-032
Identities = 66/99 (66%), Positives = 70/99 (70%)
Frame = +2 / +2
Query: 683 FITQVFGA*T*KMGRPTISLCMFSPQKQRI*QFH*QALMGCKTWLQLQ*QFLAHQIGQKW 862
F TQ GA*T*KMGR TI LCM S QK *QFH*QA MGCK WL L * + G +W
Sbjct: 35 FTTQDSGA*T*KMGRHTI*LCMLSRQKIHA*QFH*QAQMGCKIWLPLT**LQGSRSG*RW 214
Query: 863 SRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTR 979
RSWLLKE IE QGFK* +KEL GL KYHSCL+THTR
Sbjct: 215 RRSWLLKELIEPQGFK*HLRRKELCGLTKYHSCLQTHTR 331
>gb|CF072403.1|CF072403 FE1_2_H07.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_2_H07_A002 5', mRNA sequence
Length = 613
Score = 153 bits (328), Expect(5) = 9e-056
Identities = 62/76 (81%), Positives = 66/76 (86%)
Frame = -2 / -1
Query: 465 VDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLE 286
V+LLKKYPK CFRDLPGKLWRGINLEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLE
Sbjct: 613 VNLLKKYPK*CFRDLPGKLWRGINLEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLE 434
Query: 285 IHRLPLAVGVGANAMS 238
IHRLPL V A ++S
Sbjct: 433 IHRLPLVVSTNAMSVS 386
Score = 151 bits (324), Expect(6) = 3e-056
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +1 / +2
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 407 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 586
Query: 439 FGIFFEEIN 465
FGIFFEEIN
Sbjct: 587 FGIFFEEIN 613
Score = 138 bits (295), Expect(3) = 8e-038
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3 / +1
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 409 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 588
Query: 441 WDIF*GD 461
WDIF*GD
Sbjct: 589 WDIF*GD 609
Score = 137 bits (293), Expect(4) = 1e-044
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = -3 / -2
Query: 464 LISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLR 285
LISSKNIPN+VSGIFRASCG ASTLR AVWVASIS+GRHLQPTQNRSR QKIV E+ CLR
Sbjct: 612 LISSKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLR 433
Query: 284 SIGFHLR*A 258
SIGFHL *A
Sbjct: 432 SIGFHLW*A 406
Score = 129 bits (277), Expect(3) = 1e-035
Identities = 58/68 (85%), Positives = 61/68 (89%)
Frame = -1 / -3
Query: 463 *SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*D 284
*SPQKISQ +FQGSSGQAVA HQP*GLLSGWPLF KADICSP RIEAE RRL RR+A*D
Sbjct: 611 *SPQKISQIMFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*D 432
Query: 283 P*ASTCGR 260
P*ASTCG+
Sbjct: 431 P*ASTCGK 408
Score = 67.5 bits (141), Expect(4) = 4e-024
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +3
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 411 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 503
Score = 44.1 bits (90), Expect(4) = 4e-024
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 407 HSLPGRSLKHCLGYFLRR 460
HSLPGRSLKH LGYFLRR
Sbjct: 555 HSLPGRSLKHYLGYFLRR 608
Score = 43.7 bits (89), Expect(5) = 9e-056
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -1 / -2
Query: 139 K*KEEAKQWL*REARRATGHGSHARGVG 56
K K++AKQWL* EA TG+G HARGVG
Sbjct: 285 KKKKKAKQWL*GEACVPTGYGRHARGVG 202
Score = 40.9 bits (83), Expect(5) = 9e-056
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 410 KH*CNECVMHPPSVASFPKQE 348
Score = 40.5 bits (82), Expect(4) = 1e-044
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 111 FEGKRAGLRATEATRGVW 58
FEGKRA LRATE TRGVW
Sbjct: 257 FEGKRACLRATEGTRGVW 204
Score = 40.0 bits (81), Expect(6) = 3e-056
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +1
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 355 FGKEATDGGCMTHSLH*CL 411
Score = 39.1 bits (79), Expect(6) = 3e-056
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 2 RRDPDARRLRHPIGLLPP 55
RRDPD RRLRH IGL PP
Sbjct: 153 RRDPDVRRLRHRIGLPPP 206
Score = 38.2 bits (77), Expect(4) = 1e-044
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 411 *ALMQ*VCHASTIRCLLSK 355
Score = 37.7 bits (76), Expect(3) = 1e-035
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 424 LPLVVSTNAMSVSCIHHPLPPFQSKK 347
Score = 37.3 bits (75), Expect(3) = 8e-038
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 347 LLALERRQRMVDA*HTHCISAY 412
Score = 34.5 bits (69), Expect(4) = 4e-024
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 194 FGFWEGGIGRRMHDTLIALAPTPTAS 271
F W+GG G MHDTLIAL T + S
Sbjct: 348 FLLWKGGNGWWMHDTLIALVLTTSGS 425
Score = 32.2 bits (64), Expect(6) = 3e-056
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / +1
Query: 56 PHTPRVASVARSPARF 103
PHTPRV SVAR ARF
Sbjct: 202 PHTPRVPSVARRHARF 249
Score = 29.9 bits (59), Expect(5) = 9e-056
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 199 SKGRSDRATGCECRPGPAALK*KEEAKQ 116
SK RSD ATGC ALK*+++ K+
Sbjct: 360 SKARSDGATGCPDASARPALK*QKKKKK 277
Score = 26.3 bits (51), Expect(5) = 9e-056
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 46 EAYRVPETAGVRVA 5
E Y VPETA VRVA
Sbjct: 197 ETYPVPETADVRVA 156
Score = 25.4 bits (49), Expect(6) = 3e-056
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 87 VARRASLQSHCFASSFY 137
V AS QSHCFA F+
Sbjct: 233 VGTHASPQSHCFAFFFF 283
Score = 24.9 bits (48), Expect(6) = 3e-056
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 135 YLSAAGPGRHSHPVARSLLPLD 200
YLSA HPVA SLL L+
Sbjct: 296 YLSAGRALASGHPVAPSLLALE 361
Score = 22.6 bits (43), Expect(3) = 1e-035
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1 / -1
Query: 208 FPKSKGRSDRATGCECRP 155
F K S R +GCEC P
Sbjct: 361 FQSKK*WSYRMSGCECPP 308
Score = 22.6 bits (43), Expect(4) = 1e-044
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 209 LPKIQRKK*SSYRM 168
LP Q KK* SYRM
Sbjct: 370 LPPFQSKK*WSYRM 329
Score = 22.1 bits (42), Expect(4) = 4e-024
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 170 SGSSITSSFG 199
SGSSITS FG
Sbjct: 331 SGSSITSCFG 360
Score = 22.1 bits (42), Expect(3) = 8e-038
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +3
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 330 IR*LHHFLLW 359
>gb|BI351404.1|BI351404 IP1_71_B10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 378
Score = 123 bits (263), Expect(2) = 3e-051
Identities = 47/59 (79%), Positives = 55/59 (93%)
Frame = +1 / +2
Query: 478 GGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLC 654
GG+WAELVSNRGFEAGGS+TPSNIDPW IIGD+S++ VATDR+SCF+ N +ALRMEVLC
Sbjct: 8 GGLWAELVSNRGFEAGGSNTPSNIDPWLIIGDESNIIVATDRSSCFASNPIALRMEVLC 184
Score = 100 bits (214), Expect(2) = 3e-051
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +1 / +2
Query: 661 CPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATI 828
CP+GGVG+YNPG+WGMNIE K Y + M+++S E+ LTVSLTSSDGLQNLAS TI
Sbjct: 206 CPSGGVGIYNPGYWGMNIERTKVYRVTMHIRSSESVKLTVSLTSSDGLQNLASHTI 373
Score = 87.2 bits (184), Expect(2) = 2e-029
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = -3 / -1
Query: 653 QRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPA 474
Q TSI A K D RSVAT +SSPM++HGSMF+GV EPPASKPLLLTSSAH PP+
Sbjct: 183 QSTSIRSAIGLLAKQDDRSVATIILDSSPMINHGSMFEGVLEPPASKPLLLTSSAHNPPS 4
Score = 63.8 bits (133), Expect(2) = 2e-029
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = -3 / -1
Query: 830 VIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHS 657
+IV EA+F PSELV ETV S D + L* F SMFMPQ PGL* PTPP G +
Sbjct: 375 MIV*EARF*RPSELVKETVSFTDSDDLMCMVTL*TFVLSMFMPQ*PGL*IPTPPDGQA 202
>gb|CW262292.1|CW262292 104_729_11229977_148_35205_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229977, DNA
sequence
Length = 664
Score = 150 bits (323), Expect(3) = 3e-049
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = -2 / -3
Query: 456 LKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHR 277
LKKYPK CFRDLPGKLWRGINLEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHR
Sbjct: 368 LKKYPK*CFRDLPGKLWRGINLEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHR 189
Query: 276 LPLAVGVGANAMSV 235
LPL V A ++SV
Sbjct: 188 LPLVVSTNAMSVSV 147
Score = 144 bits (309), Expect(4) = 2e-049
Identities = 58/66 (87%), Positives = 61/66 (92%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LKVDA+PQLARKIPETL
Sbjct: 171 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLKVDATPQLARKIPETL 350
Query: 439 FGIFFE 456
FGIFFE
Sbjct: 351 FGIFFE 368
Score = 137 bits (293), Expect(3) = 1e-043
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3 / +2
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTV 440
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQG*C ATACPEDP*N +
Sbjct: 173 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQG*CHATACPEDP*NII 352
Query: 441 WDIF*GDQ 464
WDIF*G++
Sbjct: 353 WDIF*GEE 376
Score = 133 bits (286), Expect(3) = 2e-042
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = -3 / -1
Query: 467 WLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACL 288
+ ++SKNIPN+VSGIFRASCG ASTLR AVWVASIS+GRHLQPTQNRSR QKIV E+ CL
Sbjct: 379 YFLTSKNIPNNVSGIFRASCGVASTLRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCL 200
Query: 287 RSIGFHLR*A 258
RSIGFHL *A
Sbjct: 199 RSIGFHLW*A 170
Score = 129 bits (276), Expect(3) = 1e-039
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = -1 / -2
Query: 460 SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP 281
SPQKISQ +FQGSSGQAVA HQP*GLLSGWPLF KADICSP RIEAE RRL RR+A*DP
Sbjct: 372 SPQKISQIMFQGSSGQAVAWHQP*GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP 193
Query: 280 *ASTCGR 260
*ASTCG+
Sbjct: 192 *ASTCGK 172
Score = 67.5 bits (141), Expect(3) = 4e-023
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 263 TASGSLWISSKPPLVQSSAFCFYSAWAADVG 355
T SGSLWISS P L+QSSAFCFYS WAADVG
Sbjct: 175 TTSGSLWISSNPSLLQSSAFCFYSVWAADVG 267
Score = 50.1 bits (103), Expect(3) = 3e-049
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -3 / -3
Query: 521 ASKPLLLTSSAHMPPAPAWLIS 456
A PLLLTSSAHMPPAPAWLIS
Sbjct: 530 AEVPLLLTSSAHMPPAPAWLIS 465
Score = 49.2 bits (101), Expect(4) = 2e-049
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 457 EINHAGAGGIWAELVSNRGFEA 522
EINHAGAGGIWAELV+NRG A
Sbjct: 466 EINHAGAGGIWAELVNNRGTSA 531
Score = 47.3 bits (97), Expect(3) = 1e-043
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 456 GDQPCRSWWHMGRACQ*QRFRSW 524
GD PCR WHMGRACQ*QR+ S+
Sbjct: 465 GD*PCRGRWHMGRACQ*QRYLSY 533
Score = 47.3 bits (97), Expect(3) = 2e-042
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -1 / -1
Query: 520 LRNLCY*QALPICHQLLHG*SP 455
LR LCY*QALPICH+ LHG*SP
Sbjct: 529 LRYLCY*QALPICHRPLHG*SP 464
Score = 42.3 bits (86), Expect(3) = 1e-039
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 513 TSVTDKLCPYATSSCMVDLLK 451
TSV DKLCPYAT CMV+LL+
Sbjct: 522 TSVIDKLCPYATGPCMVNLLQ 460
Score = 41.8 bits (85), Expect(3) = 4e-023
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / +1
Query: 407 HSLPGRSLKHCLGYFLR 457
HSLPGRSLKH LGYFLR
Sbjct: 319 HSLPGRSLKHYLGYFLR 369
Score = 38.2 bits (77), Expect(3) = 4e-023
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 455 RRSTMQELVAYGQSLSVTEVSKL 523
RR TMQ VAYGQSLS+TEV +L
Sbjct: 464 RRLTMQGPVAYGQSLSITEVPQL 532
Score = 35.9 bits (72), Expect(4) = 2e-049
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +1
Query: 511 GFEAGGSHTPSNID 552
GFEAGG HTPSNID
Sbjct: 622 GFEAGGPHTPSNID 663
Score = 35.0 bits (70), Expect(3) = 3e-049
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 553 GRCLMEYESLQLRNL 509
G+CLMEYE LQLRNL
Sbjct: 664 GQCLMEYEGLQLRNL 620
Score = 32.7 bits (65), Expect(3) = 1e-043
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 510 RFRSWRLSYSIKH 548
RFRSWR SYSIKH
Sbjct: 621 RFRSWRPSYSIKH 659
Score = 32.2 bits (64), Expect(3) = 2e-042
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3 / -3
Query: 551 SMFDGV*EPPASKP 510
SMFDGV* PPASKP
Sbjct: 662 SMFDGV*GPPASKP 621
Score = 31.8 bits (63), Expect(3) = 1e-039
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2 / -2
Query: 552 VDV*WSMRASSFET 511
V+V*WSMRASSFET
Sbjct: 663 VNV*WSMRASSFET 622
Score = 25.4 bits (49), Expect(4) = 2e-049
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +3
Query: 235 HTHCISAY 258
HTHCISAY
Sbjct: 153 HTHCISAY 176
>gb|CW262291.1|CW262291 104_729_11229977_116_35209_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11229977, DNA
sequence
Length = 616
Score = 163 bits (351), Expect(2) = 4e-048
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +1 / -3
Query: 511 GFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAGGVGVYN 690
GFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFSRNIVALRMEVLC++CPAGGVGVYN
Sbjct: 584 GFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIVALRMEVLCNDCPAGGVGVYN 405
Query: 691 PGFWGM 708
PGFWGM
Sbjct: 404 PGFWGM 387
Score = 151 bits (325), Expect(2) = 3e-042
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3 / -2
Query: 510 RFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSWWCWCL* 689
RFRSWR SYSIKH PVVHHWR*LL + GD*SYIMFQ KHCCSEDGGPL**+SSWWCWCL
Sbjct: 585 RFRSWRPSYSIKH*PVVHHWR*LLYIRGD*SYIMFQPKHCCSEDGGPL**LSSWWCWCLQ 406
Query: 690 PRFLGH 707
PRFLGH
Sbjct: 405 PRFLGH 388
Score = 149 bits (321), Expect(2) = 2e-042
Identities = 59/66 (89%), Positives = 64/66 (96%)
Frame = -2 / +3
Query: 708 HAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMR 529
HAPKTWV+NTNTTSWT+ITEDLHPQSNNVS ET*CTISRH++ GVISNDGPRV+V*WSMR
Sbjct: 387 HAPKTWVVNTNTTSWTVITEDLHPQSNNVSAET*CTISRHEYRGVISNDGPRVNV*WSMR 566
Query: 528 ASSFET 511
ASSFET
Sbjct: 567 ASSFET 584
Score = 148 bits (317), Expect(2) = 2e-041
Identities = 57/66 (86%), Positives = 61/66 (92%)
Frame = -1 / +2
Query: 706 CPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYES 527
CPKNLG KHQHHQLD+H+RGPPSSEQQCF *NMMYDQSP+ RSHLQ*WTTG+CLMEYE
Sbjct: 389 CPKNLGCKHQHHQLDSHYRGPPSSEQQCFG*NMMYDQSPRI*RSHLQ*WTTGQCLMEYEG 568
Query: 526 LQLRNL 509
LQLRNL
Sbjct: 569 LQLRNL 586
Score = 146 bits (313), Expect(2) = 2e-040
Identities = 62/66 (93%), Positives = 62/66 (93%)
Frame = -3 / +1
Query: 707 MPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*E 528
MPQKPGL*TPTPPAG S QRTSILRATMFRLKHDVRSVATN EESSPMMDHGSMFDGV*
Sbjct: 388 MPQKPGL*TPTPPAGQSLQRTSILRATMFRLKHDVRSVATNIEESSPMMDHGSMFDGV*G 567
Query: 527 PPASKP 510
PPASKP
Sbjct: 568 PPASKP 585
Score = 108 bits (231), Expect(2) = 3e-027
Identities = 48/71 (67%), Positives = 52/71 (73%)
Frame = +2 / -1
Query: 494 SLSVTEVSKLEALILHQTSTRGPSLEMTPPCLWRLIVHHVSVETLLL*GWRXXXXXXXXX 673
++S+ +VSKLEALILHQT TRGPSLEMTP WRLIVHHVS ETLLL*GWR
Sbjct: 601 AVSLLQVSKLEALILHQTLTRGPSLEMTPLYSWRLIVHHVSAETLLL*GWRSSVMTVQLV 422
Query: 674 XXXFITQVFGA 706
F TQVFGA
Sbjct: 421 VLVFTTQVFGA 389
Score = 52.8 bits (109), Expect(2) = 4e-048
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1 / -3
Query: 709 NIEDGKAYNLVMYVQSPETKDLT 777
NIEDGKAYNLVMYV+SPET DLT
Sbjct: 71 NIEDGKAYNLVMYVKSPETTDLT 3
Score = 47.8 bits (98), Expect(2) = 2e-042
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = -3 / +1
Query: 779 TVRSFVSGD*TYITRL*AFPSSMFMPQK 696
TV+S VSGD TYITRL*AFPSSMF K
Sbjct: 1 TVKSVVSGDLTYITRL*AFPSSMFCKLK 84
Score = 46.0 bits (94), Expect(2) = 2e-041
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 778 LLDPLFLGTEHT*RDCRPSHLLCS 707
LL+PLF T HT*+DC+PSHLLCS
Sbjct: 2 LLNPLFPET*HT*QDCKPSHLLCS 73
Score = 45.1 bits (92), Expect(2) = 3e-042
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +3 / -2
Query: 708 EHRRWEGLQSRYVCSVPRNKGSNS 779
EHRRWEGLQS YVC V N G NS
Sbjct: 72 EHRRWEGLQSCYVC*VSGNNGFNS 1
Score = 44.6 bits (91), Expect(2) = 2e-040
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 777 C*ILCFWGLNIHNEIVGLPIFYV 709
C*I CF LNIHN+IV LPIFYV
Sbjct: 3 C*IRCFRRLNIHNKIVSLPIFYV 71
Score = 37.7 bits (76), Expect(2) = 3e-027
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 710 T*KMGRPTISLCMFSPQKQRI*Q 778
T*KMGR TI LCM S +KQRI*Q
Sbjct: 70 T*KMGRLTILLCMLSLRKQRI*Q 2
>gb|CW469202.1|CW469202 fsbb001f221m21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221m21, DNA
sequence
Length = 709
Score = 158 bits (339), Expect(3) = 1e-047
Identities = 58/66 (87%), Positives = 62/66 (93%)
Frame = +1 / -3
Query: 511 GFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAGGVGVYN 690
GFEAGG HTPSNIDPWSIIGDDSS++V TDRTSCFSRNI+ALRMEVLCD CP GGVG+YN
Sbjct: 281 GFEAGGLHTPSNIDPWSIIGDDSSIYVETDRTSCFSRNIIALRMEVLCDNCPTGGVGIYN 102
Query: 691 PGFWGM 708
PGFWGM
Sbjct: 101 PGFWGM 84
Score = 129 bits (276), Expect(3) = 1e-038
Identities = 55/72 (76%), Positives = 57/72 (79%)
Frame = -3 / +1
Query: 725 FPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSM 546
+ S MPQ PGL* PTPP G SQRTSILRA MFRLKHDVRSV+T EESSPMMDHGSM
Sbjct: 67 YDKSRTMPQNPGL*IPTPPVGQLSQRTSILRAMMFRLKHDVRSVSTYIEESSPMMDHGSM 246
Query: 545 FDGV*EPPASKP 510
FDGV PPAS P
Sbjct: 247 FDGVWRPPASNP 282
Score = 123 bits (263), Expect(2) = 4e-034
Identities = 48/63 (76%), Positives = 51/63 (80%)
Frame = +3 / -2
Query: 519 SWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSWWCWCL*PRF 698
SWR YSIKH P+VHHWR*L +CGD*S IMFQSKH CSEDGGPL *+S WWCW L PR
Sbjct: 273 SWRPPYSIKH*PMVHHWR*LFYICGD*SDIMFQSKHHCSEDGGPLR*LSYWWCWYLQPRV 94
Query: 699 LGH 707
LGH
Sbjct: 93 LGH 85
Score = 115 bits (246), Expect(3) = 2e-032
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = -1 / +2
Query: 760 LGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTR 581
L HT + + + CP+ LG K+QHHQ D++ +GPPSSEQ CFD*NMM DQSP
Sbjct: 32 LSISHTDMNKQHMIKVVPCPRTLGCKYQHHQ*DSYRKGPPSSEQ*CFD*NMMSDQSPHI* 211
Query: 580 RSHLQ*WTTGRCLMEYESLQLRNL 509
+SHLQ*WT G+CLMEY LQL+ L
Sbjct: 212 KSHLQ*WTMGQCLMEYGGLQLQTL 283
Score = 113 bits (241), Expect(2) = 5e-030
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = -2 / +3
Query: 708 HAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMR 529
HAP+ WV+NTNTTS T+I +DLHPQSN+VSTET*C IS H + VISNDGP V+V*WSM
Sbjct: 84 HAPEPWVVNTNTTSRTVIAKDLHPQSNDVSTET*CPISLHIYRRVISNDGPWVNV*WSME 263
Query: 528 ASSFE 514
ASSF+
Sbjct: 264 ASSFK 278
Score = 51.0 bits (105), Expect(3) = 1e-038
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 521 ASKPLLLTSSAHMPPAPAWLIS 456
A PLLLTSSAHMPPAPAWLIS
Sbjct: 464 AESPLLLTSSAHMPPAPAWLIS 529
Score = 50.1 bits (103), Expect(3) = 1e-047
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -2
Query: 457 EINHAGAGGIWAELVSNRGFEA 522
EINHAGAGGIWAELVSNRG A
Sbjct: 528 EINHAGAGGIWAELVSNRGDSA 463
Score = 46.9 bits (96), Expect(3) = 2e-032
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 520 LRNLCY*QALPICHQLLHG*SP 455
L +LCY*Q PICHQLLHG*SP
Sbjct: 465 LNHLCY*QVQPICHQLLHG*SP 530
Score = 46.4 bits (95), Expect(2) = 4e-034
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3 / -1
Query: 456 GDQPCRSWWHMGRACQ*QR 512
GDQPCRSWWHMG C *QR
Sbjct: 529 GDQPCRSWWHMG*TC**QR 473
Score = 42.8 bits (87), Expect(2) = 5e-030
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 513 TSVTDKLCPYATSSCMVDLLK 451
TSVT+K PYATSSCMVDLL+
Sbjct: 472 TSVTNKFSPYATSSCMVDLLQ 534
Score = 26.7 bits (52), Expect(3) = 1e-047
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 412 LARKIPETLFGIFFE 456
L + P+TLFGIFFE
Sbjct: 708 LLGRSPDTLFGIFFE 664
Score = 24.4 bits (47), Expect(3) = 1e-038
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +2
Query: 461 ISSKNIPNSVSG 426
++SK IPNSVSG
Sbjct: 659 LTSKKIPNSVSG 694
Score = 21.7 bits (41), Expect(3) = 2e-032
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 460 SPQKISQTVFQG 425
SPQ+ SQ V+QG
Sbjct: 660 SPQRRSQIVYQG 695
>gb|AW564124.1|AW564124 LG1_282_F07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 485
Score = 97.3 bits (206), Expect(6) = 2e-041
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALK 393
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIEATQTA LK
Sbjct: 351 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIEATQTATLK 485
Score = 97.3 bits (206), Expect(5) = 2e-040
Identities = 40/52 (76%), Positives = 43/52 (82%)
Frame = -2 / -1
Query: 393 LEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
LEGCCLGGLYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 485 LEGCCLGGLYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 330
Score = 88.1 bits (186), Expect(3) = 4e-023
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +3 / +2
Query: 261 LPQVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQ 392
LPQVEAYGSQA LL+YNLL SASIL GLQMSAF NRGHPDS+PQ
Sbjct: 353 LPQVEAYGSQAILLYYNLLRSASILCGLQMSAFRNRGHPDSNPQ 484
Score = 87.7 bits (185), Expect(4) = 3e-030
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = -3 / -2
Query: 392 LRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
LR AVWVASIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 484 LRVAVWVASISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 350
Score = 84.0 bits (177), Expect(3) = 1e-022
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = -1 / -3
Query: 391 *GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTCGR 260
*GLLSGWPLF KADICSP RIEAE RRL RR+A*DP*ASTCG+
Sbjct: 483 *GLLSGWPLFLKADICSPHRIEAERRRL**RRIA*DP*ASTCGK 352
Score = 46.9 bits (96), Expect(5) = 2e-040
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1 / -2
Query: 139 K*KEEAKQWL*REARRATGHGSHARGVG 56
K K++AKQWL*REA TG+G HARGVG
Sbjct: 226 KKKKKAKQWL*REACVPTGYGRHARGVG 143
Score = 40.9 bits (83), Expect(5) = 2e-040
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 354 KH*CNECVMHPPSVASFPKQE 292
Score = 40.5 bits (82), Expect(4) = 3e-030
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 111 FEGKRAGLRATEATRGVW 58
FEGKRA LRATE TRGVW
Sbjct: 198 FEGKRACLRATEGTRGVW 145
Score = 40.0 bits (81), Expect(6) = 2e-041
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +2
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 299 FGKEATDGGCMTHSLH*CL 355
Score = 39.1 bits (79), Expect(6) = 2e-041
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 2 RRDPDARRLRHPIGLLPP 55
RRDPD RRLRH IGL PP
Sbjct: 94 RRDPDVRRLRHRIGLPPP 147
Score = 38.2 bits (77), Expect(4) = 3e-030
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 355 *ALMQ*VCHASTIRCLLSK 299
Score = 37.7 bits (76), Expect(3) = 1e-022
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / -1
Query: 270 LAVGVGANAMSVSCIRRPMPPSQNPK 193
L + V NAMSVSCI P+PP Q+ K
Sbjct: 368 LPLVVSTNAMSVSCIHHPLPPFQSKK 291
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 193 LWILGRRHRTSDA*HTHCISAY 258
L L RR R DA*HTHCISAY
Sbjct: 291 LLALERRQRMVDA*HTHCISAY 356
Score = 32.2 bits (64), Expect(6) = 2e-041
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 56 PHTPRVASVARSPARF 103
PHTPRV SVAR ARF
Sbjct: 143 PHTPRVPSVARRHARF 190
Score = 29.9 bits (59), Expect(5) = 2e-040
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 199 SKGRSDRATGCECRPGPAALK*KEEAKQ 116
SK RSD ATGC ALK*+++ K+
Sbjct: 304 SKARSDGATGCPDASARPALK*QKKKKK 221
Score = 28.6 bits (56), Expect(6) = 2e-041
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 87 VARRASLQSHCFASSFY 137
V ASLQSHCFA F+
Sbjct: 174 VGTHASLQSHCFAFFFF 224
Score = 26.3 bits (51), Expect(5) = 2e-040
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 46 EAYRVPETAGVRVA 5
E Y VPETA VRVA
Sbjct: 138 ETYPVPETADVRVA 97
Score = 24.9 bits (48), Expect(6) = 2e-041
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +3
Query: 135 YLSAAGPGRHSHPVARSLLPLD 200
YLSA HPVA SLL L+
Sbjct: 240 YLSAGRALASGHPVAPSLLALE 305
Score = 24.0 bits (46), Expect(3) = 1e-022
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 110 LKGSAPGYGPRKPRE 66
LKGS YG RK RE
Sbjct: 197 LKGSVRAYGLRKARE 153
Score = 23.1 bits (44), Expect(4) = 3e-030
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1 / -1
Query: 208 FPKSKGRSDRATGCECRPGPAALK*KEEAKQ 116
F K S R +GCEC P + +EE ++
Sbjct: 305 FQSKK*WSYRMSGCECPPCA*VAEEEEEEEE 213
Score = 22.1 bits (42), Expect(3) = 4e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 169 IR*LDHFFLW 198
IR*L HF LW
Sbjct: 274 IR*LHHFLLW 303
>gb|CW122132.1|CW122132 104_500_11110443_116_34667_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110443, DNA
sequence
Length = 602
Score = 96.4 bits (204), Expect(2) = 4e-040
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +1 / +1
Query: 832 VSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMP 963
VSGTSNWTKVEQKLVAKGTNRTSRLQI TNKKGVVWL VSLMP
Sbjct: 469 VSGTSNWTKVEQKLVAKGTNRTSRLQIKTNKKGVVWL*SVSLMP 600
Score = 95.0 bits (201), Expect(2) = 2e-035
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +2 / +2
Query: 830 QFLAHQIGQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCL 964
+FLAHQIGQKWSRSWLLKEPIE QGFK*+ TKKEL+G +YHSCL
Sbjct: 467 EFLAHQIGQKWSRSWLLKEPIEPQGFK*KLTKKELYGFDQYHSCL 601
Score = 92.3 bits (195), Expect(2) = 7e-033
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 813 GFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA* 965
G + SFWHIKLDKSGAEAGC*RNQ*N+KASN N QKRSC+A SITHA*
Sbjct: 450 GIALLQSFWHIKLDKSGAEAGC*RNQ*NLKASNKN*QKRSCMALISITHA* 602
Score = 90.9 bits (192), Expect(2) = 4e-040
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +1 / +3
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATITV 834
NIEDGKAYNLVMYV+SPET DLTVSLTSSDGLQNLASATIT+
Sbjct: 264 NIEDGKAYNLVMYVKSPETTDLTVSLTSSDGLQNLASATITL 389
Score = 89.0 bits (188), Expect(2) = 7e-037
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = -3 / -1
Query: 965 SGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPETV 828
SGMSDT S TTPFL V I*SL+VLLVPLATSFCSTFVQFDVPET+
Sbjct: 602 SGMSDTDQSHTTPFLLVFI*SLEVLLVPLATSFCSTFVQFDVPETL 465
Score = 87.2 bits (184), Expect(2) = 7e-037
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = -3 / -2
Query: 830 VIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQK 696
VIVAEAKFCNPSELVNETV+S VSGD TYITRL*AFPSSMF K
Sbjct: 385 VIVAEAKFCNPSELVNETVKSVVSGDLTYITRL*AFPSSMFCKLK 251
Score = 87.2 bits (184), Expect(2) = 4e-032
Identities = 38/44 (86%), Positives = 38/44 (86%)
Frame = -2 / -3
Query: 963 RHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARN 832
RHE*Y KP NSFFV YLKP* SIGSFSNQLLLHFCPI*CARN
Sbjct: 600 RHE*Y*SKPYNSFFVSFYLKP*GSIGSFSNQLLLHFCPI*CARN 469
Score = 76.7 bits (161), Expect(2) = 2e-035
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3 / +2
Query: 708 EHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNN 830
EHRRWEGLQS YVC V N G NSFINKL* +AKLGFSY+N
Sbjct: 263 EHRRWEGLQSCYVC*VSGNNGFNSFINKL*RIAKLGFSYDN 385
Score = 73.0 bits (153), Expect(2) = 4e-032
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1 / -3
Query: 829 LL*LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCS 707
L *LKPSFA QSLLMKLL+PLF T HT*+DC+PSHLLCS
Sbjct: 384 LS*LKPSFAIRQSLLMKLLNPLFPET*HT*QDCKPSHLLCS 262
Score = 70.7 bits (148), Expect(2) = 7e-033
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +2 / +1
Query: 710 T*KMGRPTISLCMFSPQKQRI*QFH*QALMGCKTWLQLQ*Q 832
T*KMGR TI LCM S +KQRI*QFH*QAL CKTWLQL+*+
Sbjct: 265 T*KMGRLTILLCMLSLRKQRI*QFH*QALTDCKTWLQLR*R 387
>gb|CW089678.1|CW089678 104_435_10948844_114_32597_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948844, DNA
sequence
Length = 758
Score = 127 bits (272), Expect(2) = 6e-039
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +1 / +3
Query: 1048 GGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
GGCFVEG WLRNAFRWR+SIGPWEERPGHFGD W YWTDDGLGY+EFL
Sbjct: 516 GGCFVEGGWLRNAFRWRQSIGPWEERPGHFGDCWQYWTDDGLGYFEFL 659
Score = 102 bits (218), Expect(2) = 4e-031
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -3 / -2
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPP 1047
RNS YP PSSVQ CQ SPKCPGLSSHGP+D LHLNAFLSQ PSTKQPP
Sbjct: 658 RNSKYPRPSSVQYCQQSPKCPGLSSHGPMDCLHLNAFLSQPPSTKQPP 515
Score = 55.6 bits (115), Expect(2) = 6e-039
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1 / +1
Query: 976 KGHGFRTELISMLLDLKPRFLRFPG 1050
+GHGFR L+SMLLDLKPRFLRFPG
Sbjct: 337 QGHGFRNGLVSMLLDLKPRFLRFPG 411
Score = 54.2 bits (112), Expect(2) = 4e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / -1
Query: 1049 PGNLKNRGFKSKSMDISSVRKPCP 978
PGNLKNRGFKSKS+D S +RKPCP
Sbjct: 410 PGNLKNRGFKSKSIDTSPLRKPCP 339
>gb|CW089679.1|CW089679 104_435_10948844_116_32599_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10948844, DNA
sequence
Length = 699
Score = 127 bits (272), Expect(2) = 6e-039
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +1 / -1
Query: 1048 GGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
GGCFVEG WLRNAFRWR+SIGPWEERPGHFGD W YWTDDGLGY+EFL
Sbjct: 393 GGCFVEGGWLRNAFRWRQSIGPWEERPGHFGDCWQYWTDDGLGYFEFL 250
Score = 102 bits (218), Expect(2) = 4e-031
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -3 / +2
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPP 1047
RNS YP PSSVQ CQ SPKCPGLSSHGP+D LHLNAFLSQ PSTKQPP
Sbjct: 251 RNSKYPRPSSVQYCQQSPKCPGLSSHGPMDCLHLNAFLSQPPSTKQPP 394
Score = 55.6 bits (115), Expect(2) = 6e-039
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1 / -2
Query: 976 KGHGFRTELISMLLDLKPRFLRFPG 1050
+GHGFR L+SMLLDLKPRFLRFPG
Sbjct: 572 QGHGFRNGLVSMLLDLKPRFLRFPG 498
Score = 54.2 bits (112), Expect(2) = 4e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / +1
Query: 1049 PGNLKNRGFKSKSMDISSVRKPCP 978
PGNLKNRGFKSKS+D S +RKPCP
Sbjct: 499 PGNLKNRGFKSKSIDTSPLRKPCP 570
>gb|CN133998.1|CN133998 OX1_19_D01.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_19_D01_A002 5', mRNA sequence
Length = 689
Score = 128 bits (275), Expect(2) = 6e-039
Identities = 55/85 (64%), Positives = 63/85 (74%)
Frame = +1 / +3
Query: 310 IFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIW 489
+F +L+L C C+ QTA L VD S Q A+ IP +FGIFFEEINHAGAGG+W
Sbjct: 318 LFHVLVLVCSLCQIFYIGSVVAQTAQLTVDVSSQNAQTIPGNMFGIFFEEINHAGAGGLW 497
Query: 490 AELVSNRGFEAGGSHTPSNIDPWSI 564
AELVSNRGFEAGGS+TPSNIDPW I
Sbjct: 498 AELVSNRGFEAGGSNTPSNIDPWLI 572
Score = 96.8 bits (205), Expect(2) = 5e-021
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = -3 / -2
Query: 563 MDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRA 384
++HGSMF+GV EPPASKPLLLTSSAH PPAPAWLISSK +PN GI A E ST+
Sbjct: 571 INHGSMFEGVLEPPASKPLLLTSSAHNPPAPAWLISSKKMPNIFPGIV*AF*DETSTVN* 392
Query: 383 AV 378
AV
Sbjct: 391 AV 386
Score = 54.2 bits (112), Expect(2) = 6e-039
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1 / +1
Query: 568 GDDSSVFVATDRTSCFSRNIVALRMEVLC 654
GD+S++ VATDR+SCF+ N +ALRMEVLC
Sbjct: 577 GDESNIIVATDRSSCFASNPIALRMEVLC 663
Score = 26.3 bits (51), Expect(2) = 5e-021
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3 / -1
Query: 653 QRTSILRATMFRLKHDVRSVATNTEESSP 567
Q TSI A K D RSVAT +SSP
Sbjct: 662 QSTSIRSAIGLLAKQDDRSVATIILDSSP 576
>gb|BM326547.1|BM326547 PIC1_58_D07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 239
Score = 162 bits (348), Expect = 1e-038
Identities = 70/77 (90%), Positives = 73/77 (94%)
Frame = +1 / +3
Query: 736 LVMYVQSPETKDLTVSLTSSDGLQNLASATITVSGTSNWTKVEQKLVAKGTNRTSRLQIT 915
LVMYV+SPET DLTVSLTSSDGLQNLASATITVSGTS+WTK EQKL AKGT+RTSRLQI
Sbjct: 9 LVMYVKSPETTDLTVSLTSSDGLQNLASATITVSGTSHWTKTEQKLAAKGTDRTSRLQIK 188
Query: 916 TNKKGVVWLDQVSLMPE 966
TNKKGVVWLDQVSLMPE
Sbjct: 189 TNKKGVVWLDQVSLMPE 239
Score = 148 bits (317), Expect = 2e-034
Identities = 63/75 (84%), Positives = 67/75 (89%)
Frame = +2 / +1
Query: 740 LCMFSPQKQRI*QFH*QALMGCKTWLQLQ*QFLAHQIGQKWSRSWLLKEPIEHQGFK*QR 919
LCM S +KQRI*QFH*QAL CKTWLQLQ*QFLAH IGQK +RSWLLKEPIE QGFK*+
Sbjct: 13 LCMLSLRKQRI*QFH*QALTDCKTWLQLQ*QFLAHHIGQKRNRSWLLKEPIEPQGFK*KL 192
Query: 920 TKKELFGLIKYHSCL 964
TKKEL+GLIKYHSCL
Sbjct: 193 TKKELYGLIKYHSCL 237
Score = 147 bits (315), Expect = 4e-034
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = -2 / -1
Query: 966 FRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARNCYCS*SQVLQPIRAC 787
FRHE*YLIKP NSFFV YLKP* SIGSFS+QLL FCP+*CARNCYCS*SQVLQ +RAC
Sbjct: 239 FRHE*YLIKPYNSFFVSFYLKP*GSIGSFSSQLLFRFCPM*CARNCYCS*SQVLQSVRAC 60
Query: 786 **NC*ILCFWGLNIHNE 736
**NC*I CF LNIHN+
Sbjct: 59 **NC*IRCFRRLNIHNK 9
Score = 145 bits (312), Expect = 1e-033
Identities = 66/78 (84%), Positives = 68/78 (87%)
Frame = -3 / -2
Query: 965 SGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPETVIVAEAKFCNPSELV 786
SGMSDT*SS TTPFL V I*SL+VL VPLA SFCS FVQ DVPETVIVAEAKFCNPSELV
Sbjct: 238 SGMSDT*SSHTTPFLLVFI*SLEVLSVPLAASFCSVFVQCDVPETVIVAEAKFCNPSELV 59
Query: 785 NETVRSFVSGD*TYITRL 732
NETV+S VSGD TYIT L
Sbjct: 58 NETVKSVVSGDLTYITSL 5
Score = 138 bits (297), Expect = 1e-031
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = +3 / +2
Query: 741 YVCSVPRNKGSNSFINKL*WVAKLGFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNE 920
YVC V N G NSFINKL* +AKLGFSYNNSFWHI LDK+G EAGC*RN+*N+KASN N
Sbjct: 14 YVC*VSGNNGFNSFINKL*RIAKLGFSYNNSFWHITLDKNGTEAGC*RNR*NLKASNKN* 193
Query: 921 QKRSCLA*SSITHA* 965
QKRSC+A*SSITHA*
Sbjct: 194 QKRSCMA*SSITHA* 238
Score = 127 bits (273), Expect = 2e-028
Identities = 61/76 (80%), Positives = 64/76 (84%)
Frame = -1 / -3
Query: 964 QA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL*LKPSFATHQSLL 785
QA*VILDQA QLLFC LFEAL FY FL*QPAS P LSN+MCQKLLL*LKPSFA QSLL
Sbjct: 237 QA*VILDQAIQLLFC*FLFEALRFYRFL*QPASVPFLSNVMCQKLLL*LKPSFAIRQSLL 58
Query: 784 MKLLDPLFLGTEHT*R 737
MKLL+PLF T HT*+
Sbjct: 57 MKLLNPLFPET*HT*Q 10
>gb|BZ423213.1|BZ423213 id46f11.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id46f11 5', DNA sequence
Length = 794
Score = 109 bits (233), Expect(2) = 8e-038
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1 / -3
Query: 1048 GGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYW 1158
GGCFVEG+WLRNAFRWRESIGPWEERPGHFGDVWHYW
Sbjct: 111 GGCFVEGEWLRNAFRWRESIGPWEERPGHFGDVWHYW 1
Score = 91.8 bits (194), Expect(2) = 4e-030
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -3 / +2
Query: 1157 Q*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPP 1047
Q*CQTSPKCPGLSSHGPIDSLHLNAFLS SPSTKQPP
Sbjct: 2 Q*CQTSPKCPGLSSHGPIDSLHLNAFLSHSPSTKQPP 112
Score = 89.0 bits (188), Expect(2) = 3e-029
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -2 / +1
Query: 1158 PVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQ 1036
PVMPNIP+VSRPLFPWTN FSPSECIS*P+TFYKTTS S+
Sbjct: 1 PVMPNIPKVSRPLFPWTNRFSPSECIS*PLTFYKTTSYNSR 123
Score = 77.6 bits (163), Expect(2) = 1e-024
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -1 / +3
Query: 1156 SNAKHPRSVQASLPMDQLILSI*MHFLASHLLQNNLQEISRIV 1028
SNAKHP+SVQASLPMDQ ILSI*MHFLA+HLLQNNL + S +
Sbjct: 3 SNAKHPQSVQASLPMDQ*ILSI*MHFLATHLLQNNLLQ*SHAI 131
Score = 76.7 bits (161), Expect(2) = 2e-025
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +2 / -1
Query: 1049 EVVL*KVTG*EMHSDGENQLVHGKRGLDTSGMFGIT 1156
EVVL*KV+G*EMHSDGEN LVHGKRGLDT GMFGIT
Sbjct: 110 EVVL*KVSG*EMHSDGENLLVHGKRGLDTLGMFGIT 3
Score = 74.8 bits (157), Expect(2) = 3e-024
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +3 / -2
Query: 1050 RLFCRR*LAKKCIQMERINWSMGREAWTLRGC 1145
RLFCRR*+AKKCIQMERI WSMGREAWTL GC
Sbjct: 109 RLFCRR*VAKKCIQMERIYWSMGREAWTLWGC 14
Score = 69.8 bits (146), Expect(2) = 8e-038
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +3 / -3
Query: 978 GTWFPHRTYIHAFGFETTILEISWRLFC 1061
GTWFPHRTYIHAFGFETT+LEISW C
Sbjct: 288 GTWFPHRTYIHAFGFETTVLEISWYALC 205
Score = 62.0 bits (129), Expect(2) = 4e-030
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3 / +1
Query: 1049 PGNLKNRGFKSKSMDISSVRKPCP 978
PGNLKNRGFKSKSMDISSVRKPCP
Sbjct: 217 PGNLKNRGFKSKSMDISSVRKPCP 288
Score = 61.6 bits (128), Expect(2) = 2e-025
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1 / -1
Query: 976 KGHGFRTELISMLLDLKPRFLRFPG 1050
+GHGFRTELISMLLDLKPRFLRFPG
Sbjct: 290 QGHGFRTELISMLLDLKPRFLRFPG 216
Score = 61.6 bits (128), Expect(2) = 3e-029
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2 / +3
Query: 1050 SRKSQESWFQIQKHGYKFCAETMSL 976
+RKSQE WFQIQKHGYKFCAETMSL
Sbjct: 216 TRKSQEPWFQIQKHGYKFCAETMSL 290
Score = 58.8 bits (122), Expect(2) = 3e-024
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / -2
Query: 977 RDMVSAQNLYPCFWI*NHDS*DFL 1048
RDMVSAQNLYPCFWI*NH S*DFL
Sbjct: 289 RDMVSAQNLYPCFWI*NHGS*DFL 218
Score = 57.9 bits (120), Expect(2) = 1e-024
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1 / +2
Query: 1048 QEISRIVVSNPKAWI*VLCGNHVP 977
QEISR VVSNPKAWI*VLCGNHVP
Sbjct: 218 QEISRTVVSNPKAWI*VLCGNHVP 289
>gb|CF072886.1|CF072886 FE1_26_E01.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_26_E01_A002 5', mRNA sequence
Length = 476
Score = 82.6 bits (174), Expect(6) = 3e-037
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIE 369
AY KWKPMDLKQ+ S TIFC+LLLFCVGCRCRP EIE
Sbjct: 366 AYHKWKPMDLKQSFSTTIFCVLLLFCVGCRCRPLEIE 476
Score = 74.8 bits (157), Expect(5) = 6e-034
Identities = 32/44 (72%), Positives = 35/44 (79%)
Frame = -2 / -1
Query: 369 LYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPLAVGVGANAMS 238
LYF RPTSAAH E*KQ AEDC+R GLLEIHRLPL V A ++S
Sbjct: 476 LYF*RPTSAAHTE*KQNAEDCSREGLLEIHRLPLVVSTNAMSVS 345
Score = 71.2 bits (149), Expect(4) = 2e-025
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -3 / -2
Query: 368 SISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHLR*A 258
SIS+GRHLQPTQNRSR QKIV E+ CLRSIGFHL *A
Sbjct: 475 SISKGRHLQPTQNRSRTQKIVVEKDCLRSIGFHLW*A 365
Score = 46.9 bits (96), Expect(5) = 6e-034
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1 / -2
Query: 139 K*KEEAKQWL*REARRATGHGSHARGVG 56
K K++AKQWL*REA TG+G HARGVG
Sbjct: 244 KKKKKAKQWL*REACVPTGYGRHARGVG 161
Score = 40.9 bits (83), Expect(5) = 6e-034
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 256 RR*CNECVMHPTSDASFPKSK 194
+ *CNECVMHP S ASFPK +
Sbjct: 369 KH*CNECVMHPPSVASFPKQE 307
Score = 40.5 bits (82), Expect(4) = 2e-025
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 111 FEGKRAGLRATEATRGVW 58
FEGKRA LRATE TRGVW
Sbjct: 216 FEGKRACLRATEGTRGVW 163
Score = 40.0 bits (81), Expect(6) = 3e-037
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3 / +2
Query: 201 FGKEASDVGCMTHSLH*RL 257
FGKEA+D GCMTHSLH* L
Sbjct: 314 FGKEATDGGCMTHSLH*CL 370
Score = 39.1 bits (79), Expect(6) = 3e-037
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 2 RRDPDARRLRHPIGLLPP 55
RRDPD RRLRH IGL PP
Sbjct: 112 RRDPDVRRLRHRIGLPPP 165
Score = 38.2 bits (77), Expect(4) = 2e-025
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 257 *ALMQ*VCHASDVRCLLPK 201
*ALMQ*VCHAS +RCLL K
Sbjct: 370 *ALMQ*VCHASTIRCLLSK 314
Score = 32.2 bits (64), Expect(6) = 3e-037
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 56 PHTPRVASVARSPARF 103
PHTPRV SVAR ARF
Sbjct: 161 PHTPRVPSVARRHARF 208
Score = 29.9 bits (59), Expect(5) = 6e-034
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 199 SKGRSDRATGCECRPGPAALK*KEEAKQ 116
SK RSD ATGC ALK*+++ K+
Sbjct: 319 SKARSDGATGCPDASARPALK*QKKKKK 236
Score = 28.6 bits (56), Expect(6) = 3e-037
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 87 VARRASLQSHCFASSFY 137
V ASLQSHCFA F+
Sbjct: 192 VGTHASLQSHCFAFFFF 242
Score = 26.3 bits (51), Expect(5) = 6e-034
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 46 EAYRVPETAGVRVA 5
E Y VPETA VRVA
Sbjct: 156 ETYPVPETADVRVA 115
Score = 24.9 bits (48), Expect(6) = 3e-037
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +3
Query: 135 YLSAAGPGRHSHPVARSLLPLD 200
YLSA HPVA SLL L+
Sbjct: 255 YLSAGRALASGHPVAPSLLALE 320
Score = 22.6 bits (43), Expect(4) = 2e-025
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 209 LPKIQRKK*SSYRM 168
LP Q KK* SYRM
Sbjct: 329 LPPFQSKK*WSYRM 288
>gb|BG488202.1|BG488202 RHIZ2_60_G05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 554
Score = 149 bits (320), Expect = 8e-035
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = +1 / +3
Query: 289 KQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINH 468
K A+ I C L LFC+GC+C SE+EATQTA L VDASPQLARKIP+TLFGIFFEEINH
Sbjct: 327 KDAAPRAILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFEEINH 506
Query: 469 AGAGGIWAELVSNRGF 516
AGAGGIWAELVSNRGF
Sbjct: 507 AGAGGIWAELVSNRGF 554
Score = 142 bits (305), Expect(2) = 2e-034
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = -3 / -2
Query: 515 KPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPT 336
KPLLLTSSAHMPPAPAWLISSK IPNSVSGIFRASCGEAST+R AVWVAS S+ RHLQP
Sbjct: 553 KPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPK 374
Query: 335 QNRSRRQKIVPEEACL 288
QNR+++Q++ A L
Sbjct: 373 QNRNKKQRMARGAASL 326
Score = 105 bits (224), Expect(2) = 1e-021
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = +3 / +2
Query: 327 SILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWDIF*GDQPCRSWWHMGRACQ* 506
S+L LQM GHPD P G CLA AC EDP* T+WD+ *GDQPCRSWWHMG C *
Sbjct: 365 SVLLRLQMPGIRVGGHPDGDPHGRCLAAACSEDP*YTIWDLL*GDQPCRSWWHMG*TC** 544
Query: 507 QRF 515
QRF
Sbjct: 545 QRF 553
Score = 25.8 bits (50), Expect(2) = 2e-034
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -1 / -1
Query: 238 CVMHPTSDASFPKSKGRSDRATGCECRPGPAALK*KEEAKQ 116
C+ HP DAS P + RA E G A + E Q
Sbjct: 275 CIHHPKEDASSPAASAGQGRA*EEESSGGVPASRLSREEGQ 153
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / +3
Query: 50 PPPHTPRVASVARS 91
P HT VASVARS
Sbjct: 57 PRTHTACVASVARS 98
>gb|BZ345347.1|BZ345347 hr49h09.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr49h09 5', DNA sequence
Length = 493
Score = 92.3 bits (195), Expect(2) = 2e-021
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1 / +1
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATITVSGTSNWTKVEQKLVA 879
NIEDGKAYNLVMYV+SPET DL VSLTSSDGLQNLASATIT+ S + Q LVA
Sbjct: 148 NIEDGKAYNLVMYVKSPETTDLIVSLTSSDGLQNLASATITLVSFSRYQDKCQYLVA 318
Score = 83.1 bits (175), Expect(3) = 8e-032
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3 / -3
Query: 830 VIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQK 696
VIVAEA+FCNPSELV+ET++S VSGD TYITRL*AFPSSMF K
Sbjct: 269 VIVAEARFCNPSELVSETIKSVVSGDLTYITRL*AFPSSMFCKLK 135
Score = 76.7 bits (161), Expect(3) = 2e-028
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -2 / -2
Query: 828 YCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYV 709
YCS*SQ+LQPIRAC**N + CFW LNIHN+IVGL IFYV
Sbjct: 267 YCS*SQILQPIRAC**NYQVGCFW*LNIHNKIVGLSIFYV 148
Score = 76.2 bits (160), Expect(3) = 9e-033
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +3 / +3
Query: 708 EHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNN 830
EHRRW+GLQS YVC V RN +SF NKL*WVAK GFSYNN
Sbjct: 147 EHRRWKGLQSCYVC*VTRNNRLDSFTNKL*WVAKSGFSYNN 269
Score = 72.5 bits (152), Expect(2) = 9e-021
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -1 / -1
Query: 829 LL*LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCS 707
LL*LKP FATHQSLL+KL LFL T HT*+DCRP HLLCS
Sbjct: 268 LL*LKPDFATHQSLLVKLSSRLFLVT*HT*QDCRPFHLLCS 146
Score = 69.3 bits (145), Expect(3) = 9e-026
Identities = 32/41 (78%), Positives = 33/41 (80%)
Frame = +2 / +2
Query: 710 T*KMGRPTISLCMFSPQKQRI*QFH*QALMGCKTWLQLQ*Q 832
T*KM RPTI LCM S QKQ * FH*QALMGCK WLQLQ*+
Sbjct: 149 T*KMERPTILLCMLSHQKQPT**FH*QALMGCKIWLQLQ*R 271
Score = 63.8 bits (133), Expect(3) = 9e-033
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +1 / +2
Query: 847 NWTKVEQKLVAKGTNRTSRLQITTNKKGV 933
NWTKVEQKLVAKGTNRTSRLQIT +KGV
Sbjct: 365 NWTKVEQKLVAKGTNRTSRLQITLTRKGV 451
Score = 58.8 bits (122), Expect(3) = 8e-032
Identities = 25/29 (86%), Positives = 25/29 (86%)
Frame = -2 / -1
Query: 933 NSFFVRCYLKP*CSIGSFSNQLLLHFCPI 847
NSF CYLKP* SIGSFSNQLLLHFCPI
Sbjct: 451 NSFPC*CYLKP*GSIGSFSNQLLLHFCPI 365
Score = 55.6 bits (115), Expect(3) = 2e-028
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -3 / -2
Query: 941 SQTTPFLFVVI*SLDVLLVPLATSFCSTFVQ 849
++ TPFL VI*SL+VLLVPLAT+FCSTFVQ
Sbjct: 459 TKQTPFLVSVI*SLEVLLVPLATNFCSTFVQ 367
Score = 53.3 bits (110), Expect(3) = 9e-026
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +2 / +3
Query: 848 IGQKWSRSWLLKEPIEHQGFK*QRTKKE 931
IGQKWS+SWLLKEPIE QGFK* KE
Sbjct: 366 IGQKWSKSWLLKEPIEPQGFK*H*QGKE 449
Score = 49.6 bits (102), Expect(2) = 9e-021
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -1 / -3
Query: 949 LDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSN 848
L + +LL +LFEAL FYWFL*QP APLLSN
Sbjct: 467 LIKPNKLLSLLVLFEALRFYWFL*QPTFAPLLSN 366
Score = 40.5 bits (82), Expect(3) = 9e-033
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2 / +1
Query: 923 KKELFGLIKYHSCLKTH 973
++ LFGLIKYHSCLKTH
Sbjct: 442 ERSLFGLIKYHSCLKTH 492
Score = 35.4 bits (71), Expect(3) = 8e-032
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2 / -3
Query: 972 CVFRHE*YLIKPN 934
CVFRHE*YLIKPN
Sbjct: 491 CVFRHE*YLIKPN 453
Score = 34.1 bits (68), Expect(3) = 9e-026
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / +3
Query: 925 KGVVWLDQVSLMPEDT 972
K VW DQVSLMPEDT
Sbjct: 444 KEFVWFDQVSLMPEDT 491
Score = 33.1 bits (66), Expect(3) = 2e-028
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -1
Query: 974 YVSSGMSDT*SSQTTPF 924
YVSSGMSDT*S+QT F
Sbjct: 493 YVSSGMSDT*SNQTNSF 443
Score = 31.8 bits (63), Expect(2) = 2e-021
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3 / +2
Query: 921 QKRSCLA*SSITHA*RHI 974
+K CL *SSITHA*RHI
Sbjct: 440 RKGVCLV*SSITHA*RHI 493
>gb|CW169583.1|CW169583 104_579_11154749_116_36503_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154749, DNA
sequence
Length = 731
Score = 141 bits (303), Expect = 2e-032
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = +1 / +2
Query: 493 ELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAG 672
+++ GFEAGG +TPSNIDPW+IIGD+SS++V T+ SCF+RNIVALRMEVLCD C G
Sbjct: 209 DIIYPLGFEAGGPYTPSNIDPWNIIGDESSIYVTTEAASCFTRNIVALRMEVLCDNCRTG 388
Query: 673 GVGVYNPGFWGM 708
GVG+YNPGFWGM
Sbjct: 389 GVGIYNPGFWGM 424
Score = 106 bits (226), Expect = 7e-022
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -3 / -3
Query: 707 MPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*E 528
MPQ PGL* PTPP SQRTSILRAT+F +K + SV T E+SSPMM HGSMF+GV*
Sbjct: 423 MPQNPGL*MPTPPVRQLSQRTSILRATIFLVKQEAASVVTYMEDSSPMMFHGSMFEGV*G 244
Query: 527 PPASKP 510
PPASKP
Sbjct: 243 PPASKP 226
>gb|CW206795.1|CW206795 104_635_11187778_148_36966_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11187778, DNA
sequence
Length = 654
Score = 141 bits (303), Expect = 2e-032
Identities = 51/72 (70%), Positives = 62/72 (86%)
Frame = +1 / +3
Query: 493 ELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAG 672
+++ GFEAGG +TPSNIDPW+IIGD+SS++V T+ SCF+RNIVALRMEVLCD C G
Sbjct: 384 DIIYPLGFEAGGPYTPSNIDPWNIIGDESSIYVTTEAASCFTRNIVALRMEVLCDNCRTG 563
Query: 673 GVGVYNPGFWGM 708
GVG+YNPGFWGM
Sbjct: 564 GVGIYNPGFWGM 599
Score = 106 bits (226), Expect = 7e-022
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -3 / -3
Query: 707 MPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*E 528
MPQ PGL* PTPP SQRTSILRAT+F +K + SV T E+SSPMM HGSMF+GV*
Sbjct: 598 MPQNPGL*MPTPPVRQLSQRTSILRATIFLVKQEAASVVTYMEDSSPMMFHGSMFEGV*G 419
Query: 527 PPASKP 510
PPASKP
Sbjct: 418 PPASKP 401
>gb|BZ349906.1|BZ349906 hr47b09.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hr47b09 5', DNA sequence
Length = 673
Score = 104 bits (221), Expect(2) = 8e-031
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = +1 / -2
Query: 1048 GGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
GG + G++LRNAFRW E++GPWEERPGHF D W YWTDDGLG++EFL
Sbjct: 225 GGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWGYWTDDGLGFFEFL 82
Score = 54.7 bits (113), Expect(2) = 8e-031
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +1 / -2
Query: 898 SRLQITTNKKGVVWLDQVSLMPEDTY 975
SRLQ+TT+K GVVWLDQVS+MP DTY
Sbjct: 669 SRLQLTTSKSGVVWLDQVSVMPMDTY 592
>gb|BG273563.1|BG273563 OV2_27_C04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 304
Score = 135 bits (289), Expect = 1e-030
Identities = 54/70 (77%), Positives = 59/70 (84%)
Frame = +1 / +3
Query: 289 KQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINH 468
K A+ I C L LFC+GC+C SE+EATQTA L VDASPQLARKIP+TLFGIFFEEINH
Sbjct: 93 KDAAPRAILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFEEINH 272
Query: 469 AGAGGIWAEL 498
AGAGGIWAEL
Sbjct: 273 AGAGGIWAEL 302
Score = 131 bits (281), Expect(2) = 1e-030
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = -3 / -1
Query: 500 TSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSR 321
TSSAHMPPAPAWLISSK IPNSVSGIFRASCGEAST+R AVWVAS S+ RHLQP QNR++
Sbjct: 304 TSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQNRNK 125
Query: 320 RQKIVPEEACL 288
+Q++ A L
Sbjct: 124 KQRMARGAASL 92
Score = 99.6 bits (211), Expect(2) = 3e-021
Identities = 37/58 (63%), Positives = 40/58 (68%)
Frame = +3 / +2
Query: 327 SILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWDIF*GDQPCRSWWHMGRAC 500
S+L LQM GHPD P G CLA AC EDP* T+WD+ *GDQPCRSWWHMG C
Sbjct: 131 SVLLRLQMPGIRVGGHPDGDPHGRCLAAACSEDP*YTIWDLL*GDQPCRSWWHMG*TC 304
Score = 24.0 bits (46), Expect(2) = 3e-021
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 299 PLVQSSAFCFYSAWAAD 349
PL SSA CF SA AA+
Sbjct: 103 PLAPSSASCFCSA*AAN 153
Score = 23.5 bits (45), Expect(2) = 1e-030
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 238 CVMHPTSDASFPKSK 194
C+ HP DAS P ++
Sbjct: 50 CIHHPKEDASSPDAR 6
>gb|CW434095.1|CW434095 fsbb001f149j24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f149j24, DNA
sequence
Length = 594
Score = 68.9 bits (144), Expect(3) = 1e-029
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1 / -2
Query: 844 SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTY 975
+ WTK+E L + N SRLQ+TT+K GVVWLDQVS+MP DTY
Sbjct: 176 AKWTKIEFHLRSNQNNTNSRLQLTTSKSGVVWLDQVSVMPMDTY 45
Score = 59.3 bits (123), Expect(3) = 1e-029
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +1 / -3
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATIT 831
NIE GK Y + ++++S +T LTVSLTSSDGLQ LA+ TIT
Sbjct: 403 NIEKGKVYKVSLHIRSSDTVSLTVSLTSSDGLQKLAAHTIT 281
Score = 46.0 bits (94), Expect(3) = 1e-029
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1 / -1
Query: 661 CPAGGVGVYNPGFWGM 708
CP+GGVGVYNPG+WGM
Sbjct: 594 CPSGGVGVYNPGYWGM 547
>gb|CF431332.1|CF431332 NIT1_5_E04.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_5_E04_A002 5', mRNA sequence
Length = 266
Score = 127 bits (273), Expect = 2e-028
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = +1 / +1
Query: 490 AELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPA 669
A L NRGFEAGG HTPSNIDPWSIIGDDSS++V TDRTSCFS NI+ALRMEVLCD CP
Sbjct: 82 AALDRNRGFEAGGLHTPSNIDPWSIIGDDSSIYVETDRTSCFSPNIIALRMEVLCDNCPT 261
Query: 670 G 672
G
Sbjct: 262 G 264
Score = 111 bits (238), Expect = 2e-023
Identities = 48/62 (77%), Positives = 51/62 (82%)
Frame = -3 / -1
Query: 674 PPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTS 495
PP G SQRTSILRA MF LKHDVRSV+T EESSPMMDHGSMFDGV PPAS PL L+S
Sbjct: 266 PPVGQLSQRTSILRAMMFGLKHDVRSVSTYIEESSPMMDHGSMFDGVWRPPASNPLFLSS 87
Query: 494 SA 489
+A
Sbjct: 86 AA 81
>gb|CW469203.1|CW469203 fsbb001f221m21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f221m21, DNA
sequence
Length = 752
Score = 100 bits (212), Expect(2) = 9e-028
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +1 / +3
Query: 289 KQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFE 456
K A+ I C L LFC+GC+C SE+EATQTA L VDASPQLARKIP+TLFGIFFE
Sbjct: 363 KDAAPRAILCFLFLFCLGCKCLASELEATQTATLTVDASPQLARKIPDTLFGIFFE 530
Score = 95.5 bits (202), Expect(2) = 4e-027
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = -3 / -2
Query: 461 ISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACL 288
++SK IPNSVSGIFRASCGEAST+R AVWVAS S+ RHLQP QNR+++Q++ A L
Sbjct: 535 LTSKKIPNSVSGIFRASCGEASTVRVAVWVASNSDARHLQPKQNRNKKQRMARGAASL 362
Score = 51.0 bits (105), Expect(2) = 4e-027
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -3 / -2
Query: 521 ASKPLLLTSSAHMPPAPAWLIS 456
A PLLLTSSAHMPPAPAWLIS
Sbjct: 730 AESPLLLTSSAHMPPAPAWLIS 665
Score = 48.7 bits (100), Expect(2) = 9e-028
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1 / +3
Query: 457 EINHAGAGGIWAELVSNRGFEA 522
EINHAGAGGIWAELV+NRG A
Sbjct: 666 EINHAGAGGIWAELVNNRGDSA 731
>gb|CW190352.1|CW190352 104_612_11174457_148_36834_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174457, DNA
sequence
Length = 630
Score = 124 bits (265), Expect = 3e-027
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +1 / +3
Query: 1012 LLDLKPRFLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
LL L+ + F GGCFVEGD LRNAFRW+E+IGPWEERPGH+GD W YWTDDGLGY+EFL
Sbjct: 141 LLTLQYLRIIFIGGCFVEGDQLRNAFRWKETIGPWEERPGHYGDFWKYWTDDGLGYFEFL 320
>gb|CW315229.1|CW315229 104_806_11472253_148_35827_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11472253, DNA
sequence
Length = 602
Score = 55.1 bits (114), Expect(3) = 4e-023
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +1 / -1
Query: 511 GFEAGGSHTPSNIDPWSIIGDDSSV 585
GFEAGG +TPSNIDPW IIGD+SS+
Sbjct: 77 GFEAGGPNTPSNIDPWLIIGDESSI 3
Score = 53.8 bits (111), Expect(3) = 4e-023
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1 / -1
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSH 534
F ++ EINHAGAGG+WAELVSNRG E S+
Sbjct: 260 FWLYL*EINHAGAGGLWAELVSNRGSEERSSY 165
Score = 42.8 bits (87), Expect(3) = 4e-023
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1 / -2
Query: 388 LKVDASPQLARKIPETLFGIFFE 456
L V+ASPQ ARKIP+ +FGIFFE
Sbjct: 475 LSVNASPQNARKIPDKMFGIFFE 407
>gb|CW159383.1|CW159383 104_565_11149329_116_36407_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149329, DNA
sequence
Length = 682
Score = 103 bits (220), Expect = 5e-021
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +1 / +3
Query: 1033 FLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
+L GG +V G++L NAFRW E++GPWEERPGHF D W YWTDDGLG++EFL
Sbjct: 108 YLSLLGGNYVMGNYLINAFRWSETVGPWEERPGHFNDAWAYWTDDGLGFFEFL 266
>gb|CW169584.1|CW169584 104_579_11154749_148_36504_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154749, DNA
sequence
Length = 708
Score = 78.0 bits (164), Expect(2) = 5e-021
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1 / -1
Query: 844 SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYK 978
S+WT+VE +LVA T RTSRL +TT+K+GV+W DQVSLMP DTY+
Sbjct: 156 SDWTRVELQLVAHETCRTSRLDLTTSKRGVIWFDQVSLMPSDTYR 22
Score = 47.8 bits (98), Expect(2) = 5e-021
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1 / -3
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSS 795
NIE+GK YNLVMYV+S E+ +LT SLT S
Sbjct: 391 NIEEGKTYNLVMYVRSLESVELTASLTCS 305
>gb|CW329542.1|CW329542 104_826_11479899_148_35996_014 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479899, DNA
sequence
Length = 708
Score = 78.0 bits (164), Expect(2) = 5e-021
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1 / -1
Query: 844 SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYK 978
S+WT+VE +LVA T RTSRL +TT+K+GV+W DQVSLMP DTY+
Sbjct: 318 SDWTRVELQLVAHETCRTSRLDLTTSKRGVIWFDQVSLMPSDTYR 184
Score = 47.8 bits (98), Expect(2) = 5e-021
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1 / -3
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSS 795
NIE+GK YNLVMYV+S E+ +LT SLT S
Sbjct: 553 NIEEGKTYNLVMYVRSLESVELTASLTCS 467
>gb|CW329541.1|CW329541 104_826_11479899_116_35995_014 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11479899, DNA
sequence
Length = 735
Score = 78.0 bits (164), Expect(2) = 5e-021
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1 / +2
Query: 844 SNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYK 978
S+WT+VE +LVA T RTSRL +TT+K+GV+W DQVSLMP DTY+
Sbjct: 497 SDWTRVELQLVAHETCRTSRLDLTTSKRGVIWFDQVSLMPSDTYR 631
Score = 47.8 bits (98), Expect(2) = 5e-021
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1 / +1
Query: 709 NIEDGKAYNLVMYVQSPETKDLTVSLTSS 795
NIE+GK YNLVMYV+S E+ +LT SLT S
Sbjct: 262 NIEEGKTYNLVMYVRSLESVELTASLTCS 348
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,625,314,114
Number of Sequences: 832831
Number of extensions: 27079525
Number of successful extensions: 165985
Number of sequences better than 1.0e-020: 49
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 40231470191
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)