TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131605.2.2
(713 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN137511.1|CN137511 OX1_57_F09.g1_A002 Oxidatively-stres... 179 1e-062
gb|CN147613.1|CN147613 WOUND1_50_G07.g1_A002 Wounded leaves... 183 6e-060
gb|CN137437.1|CN137437 OX1_57_F09.b1_A002 Oxidatively-stres... 176 4e-058
gb|BG948748.1|BG948748 LG1_330_B09.b1_A002 Light Grown 1 (L... 176 9e-056
gb|BE352878.1|BE352878 LG1_295_E09.g1_A002 Light Grown 1 (L... 184 3e-055
gb|CX608695.1|CX608695 ANR1_40_E04.b1_A002 Anaerobic roots ... 172 4e-055
gb|CX608780.1|CX608780 ANR1_40_E04.g1_A002 Anaerobic roots ... 172 5e-055
gb|CF772686.1|CF772686 DSBF1_38_B07.g1_A010 Drought-stresse... 176 2e-053
gb|BG047650.1|BG047650 OV1_26_E03.b1_A002 Ovary 1 (OV1) Sor... 174 1e-051
gb|BG048004.1|BG048004 OV1_26_E03.g1_A002 Ovary 1 (OV1) Sor... 176 3e-049
gb|BE593343.1|BE593343 WS1_100_F02.g1_A002 Water-stressed 1... 169 2e-047
gb|CD432106.1|CD432106 ETH1_26_A06.b1_A002 Ethylene-treated... 163 2e-041
gb|CD432203.1|CD432203 ETH1_26_A06.g1_A002 Ethylene-treated... 163 2e-041
gb|AW679925.1|AW679925 WS1_33_E12.g1_A002 Water-stressed 1 ... 163 3e-039
gb|AW745353.1|AW745353 WS1_33_E12.b1_A002 Water-stressed 1 ... 163 3e-039
gb|CF484027.1|CF484027 POL1_2_D10.g1_A002 Pollen Sorghum bi... 159 5e-038
gb|BE593549.1|BE593549 WS1_100_F02.b1_A002 Water-stressed 1... 123 7e-029
gb|BF656971.1|BF656971 OV2_19_D04.b1_A002 Ovary 2 (OV2) Sor... 120 2e-026
>gb|CN137511.1|CN137511 OX1_57_F09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_F09_A002 5', mRNA sequence
Length = 573
Score = 179 bits (386), Expect(4) = 1e-062
Identities = 69/81 (85%), Positives = 73/81 (90%)
Frame = -2 / -3
Query: 448 RPQDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLV 269
R QDAKHPSCVGCPGVYLLA MNRDHPYEP CHQIL+GPPCQGSIN E L DGWGDLLV
Sbjct: 388 RRQDAKHPSCVGCPGVYLLAGMNRDHPYEPPCHQILNGPPCQGSINHETLGEDGWGDLLV 209
Query: 268 LGHLGEQLIVGGLIEEHSVVD 206
LGHLG+QL+VGGL+EEH VVD
Sbjct: 208 LGHLGDQLVVGGLVEEHRVVD 146
Score = 173 bits (373), Expect(4) = 7e-060
Identities = 73/83 (87%), Positives = 81/83 (97%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNN+VLFDQATYDKL+SEVPKYKQITPS+LSERL +NGSLARRAIKDLMA+GLIRMVSVH
Sbjct: 146 VNNSVLFDQATYDKLVSEVPKYKQITPSVLSERLMINGSLARRAIKDLMARGLIRMVSVH 325
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L TL+
Sbjct: 326 SSQQIYTRATNT*GMFCILSTLT 394
Score = 148 bits (317), Expect(3) = 5e-047
Identities = 62/77 (80%), Positives = 63/77 (81%)
Frame = +1 / +1
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR LRGAQVQADHPI P+ A *WILGTEGH GSDGKGAHKDGLCSF PAD
Sbjct: 160 ALRPGHLRQVGLRGAQVQADHPIRPLRASHD*WILGTEGH*GSDGKGAHKDGLCSFQPAD 339
Query: 400 IHQGNQHMRGVLRLADV 450
IHQGNQHMR VL L DV
Sbjct: 340 IHQGNQHMRDVLHLVDV 390
Score = 134 bits (288), Expect(3) = 7e-042
Identities = 61/82 (74%), Positives = 63/82 (76%)
Frame = -3 / -1
Query: 450 NVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVICL 271
NV K QN PHVLVALVYICWLE*TETILMSP AIRSLMALRAKDPL +RRS+R DGVICL
Sbjct: 390 NVDKMQNIPHVLVALVYICWLE*TETILMSPLAIRSLMALRAKDPLIMRRSERTDGVICL 211
Query: 270 YLGTXXXXXXXXXXXXSTALLT 205
YLGT ST LLT
Sbjct: 210 YLGTSETNLS*VAWSKSTELLT 145
Score = 111 bits (238), Expect(3) = 4e-035
Identities = 44/50 (88%), Positives = 44/50 (88%)
Frame = +3 / +3
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGR 449
S S LMDPWHGGP RI*WQ GS*GWSLFI ASRYTPGQPTHEGCFASC R
Sbjct: 240 SVS*LMDPWHGGPLRI*WQGGS*GWSLFIPASRYTPGQPTHEGCFASCRR 389
Score = 58.3 bits (121), Expect(4) = 7e-060
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +3 / +2
Query: 480 ISSLI*SWLDQSYCCVECRIFLRLLYYFKI 569
ISSL SWL++SYCCVEC IFL+L YYFK+
Sbjct: 410 ISSLFQSWLNRSYCCVEC*IFLKLSYYFKL 499
Score = 55.1 bits (114), Expect(3) = 5e-047
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 475 LLYQV*FNRGSINLTVVLNVEYF*DYCTILRSCFL*HLRP 594
++YQV FN GSI+LTVVLNVEYF* Y TIL S + ++ P
Sbjct: 405 IIYQVYFNHGSIDLTVVLNVEYF*SYRTILSSGYHPNIYP 524
Score = 52.8 bits (109), Expect(4) = 1e-062
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -2 / -1
Query: 574 NMILK*YNNLKNIRHSTQQ*D*SSHD*IKLDI 479
N+ LK*Y+N KNI+HSTQQ*D SHD* KLDI
Sbjct: 504 NLSLK*YDNFKNIQHSTQQ*DRLSHD*NKLDI 409
Score = 51.5 bits (106), Expect(3) = 4e-035
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 479 YIKFNLIVARSILLLC*MSNIFEIIVLF*DHVFYNI 586
YIKF I+A+SILLLC*M NIFE+IVLF* V I
Sbjct: 409 YIKFISIMAQSILLLC*MLNIFEVIVLF*AQVTIQI 516
Score = 50.6 bits (104), Expect(3) = 7e-042
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 569 DLKIVQ*SQKYSTFNTTVRLIEPRLN*T*Y 480
+LKIV+* QKYSTFNTTVR IEP L *T*Y
Sbjct: 499 ELKIVR*LQKYSTFNTTVRSIEP*LK*T*Y 410
Score = 33.6 bits (67), Expect(4) = 1e-062
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 646 EQRLVDIPHQD*NLDGNMVL 587
E R VDIPHQD LDGN+ L
Sbjct: 552 ESREVDIPHQDKYLDGNLSL 493
Score = 32.2 bits (64), Expect(4) = 1e-062
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 158 RLRTWPAWTMAA 123
RLRTWPAWT AA
Sbjct: 98 RLRTWPAWTTAA 63
Score = 28.6 bits (56), Expect(4) = 7e-060
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / +2
Query: 585 FKTMLPSKF*SW*GISTNLCS 647
FK LPSK+ S *GIST+L S
Sbjct: 491 FKLRLPSKYLS**GISTSLLS 553
Score = 28.6 bits (56), Expect(4) = 7e-060
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 103 PEEGEGPAAIV 135
PEEGEGPAA+V
Sbjct: 43 PEEGEGPAAVV 75
Score = 24.9 bits (48), Expect(3) = 7e-042
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 633 LIFLTKIKIWMAT 595
LIFL +I IWM T
Sbjct: 539 LIFLIRINIWMVT 501
Score = 24.4 bits (47), Expect(3) = 5e-047
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 596 VAIQILILVRNIN 634
V IQI IL+RNIN
Sbjct: 502 VTIQIFILMRNIN 540
Score = 24.0 bits (46), Expect(3) = 4e-035
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +3
Query: 601 HPNFNLGEEYQPI 639
HPN EEYQP+
Sbjct: 507 HPNIYPDEEYQPL 545
>gb|CN147613.1|CN147613 WOUND1_50_G07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_G07_A002 5', mRNA sequence
Length = 528
Score = 183 bits (395), Expect(3) = 6e-060
Identities = 70/81 (86%), Positives = 74/81 (91%)
Frame = -2 / -2
Query: 448 RPQDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLV 269
R QDAKHPSCVGCPGVYLLA MNRDHPYEP CHQIL+GPPCQGSINPE L DGWGDLLV
Sbjct: 410 RRQDAKHPSCVGCPGVYLLAGMNRDHPYEPPCHQILNGPPCQGSINPETLGEDGWGDLLV 231
Query: 268 LGHLGEQLIVGGLIEEHSVVD 206
LGHLG+QL+VGGL+EEH VVD
Sbjct: 230 LGHLGDQLVVGGLVEEHRVVD 168
Score = 176 bits (379), Expect(3) = 5e-058
Identities = 74/83 (89%), Positives = 82/83 (98%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNN+VLFDQATYDKL+SEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMVSVH
Sbjct: 168 VNNSVLFDQATYDKLVSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVSVH 347
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L TL+
Sbjct: 348 SSQQIYTRATNT*GMFCILSTLT 416
Score = 150 bits (322), Expect(2) = 1e-046
Identities = 63/77 (81%), Positives = 64/77 (83%)
Frame = +1 / +2
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR LRGAQVQADHPI P+ A Q *WILGTEGH GSDGKGAHKDGLCSF PAD
Sbjct: 182 ALRPGHLRQVGLRGAQVQADHPIRPLRASQD*WILGTEGH*GSDGKGAHKDGLCSFQPAD 361
Query: 400 IHQGNQHMRGVLRLADV 450
IHQGNQHMR VL L DV
Sbjct: 362 IHQGNQHMRDVLHLVDV 412
Score = 135 bits (290), Expect(2) = 3e-040
Identities = 62/82 (75%), Positives = 63/82 (76%)
Frame = -3 / -3
Query: 450 NVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVICL 271
NV K QN PHVLVALVYICWLE*TETILMSP AIRSLMALRAKDPL LRRS+R DGVICL
Sbjct: 412 NVDKMQNIPHVLVALVYICWLE*TETILMSPLAIRSLMALRAKDPLILRRSERTDGVICL 233
Query: 270 YLGTXXXXXXXXXXXXSTALLT 205
YLGT ST LLT
Sbjct: 232 YLGTSETNLS*VAWSKSTELLT 167
Score = 116 bits (248), Expect(2) = 2e-034
Identities = 45/50 (90%), Positives = 45/50 (90%)
Frame = +3 / +1
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGR 449
S SGLMDPWHGGP RI*WQ GS*GWSLFI ASRYTPGQPTHEGCFASC R
Sbjct: 262 SVSGLMDPWHGGPLRI*WQGGS*GWSLFIPASRYTPGQPTHEGCFASCRR 411
Score = 59.7 bits (124), Expect(3) = 5e-058
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +3
Query: 480 ISSLI*SWLDQSYCCVECRIFLRLLYYFKI 569
ISSL SWL QSYCCVEC IFL+L YYFK+
Sbjct: 432 ISSLFQSWLSQSYCCVEC*IFLKLSYYFKL 521
Score = 57.4 bits (119), Expect(2) = 1e-046
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1 / +1
Query: 475 LLYQV*FNRGSINLTVVLNVEYF*DYCTILRSCF 576
++YQV FN GS+NLTVVLNVEYF* Y TIL S +
Sbjct: 427 IIYQVYFNHGSVNLTVVLNVEYF*SYRTILSSSY 528
Score = 55.1 bits (114), Expect(3) = 6e-060
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2 / -3
Query: 574 NMILK*YNNLKNIRHSTQQ*D*SSHD*IKLDI 479
N+ LK*Y+N KNI+HSTQQ*D* SHD* KLDI
Sbjct: 526 NLSLK*YDNFKNIQHSTQQ*D*LSHD*NKLDI 431
Score = 51.0 bits (105), Expect(2) = 2e-034
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2 / +2
Query: 479 YIKFNLIVARSILLLC*MSNIFEIIVLF*DHV 574
YIKF I+A+SILLLC*M NIFE+IVLF* V
Sbjct: 431 YIKFISIMAQSILLLC*MLNIFEVIVLF*AQV 526
Score = 51.0 bits (105), Expect(2) = 3e-040
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -1 / -2
Query: 569 DLKIVQ*SQKYSTFNTTVRLIEPRLN*T*Y 480
+LKIV+* QKYSTFNTTVRL EP L *T*Y
Sbjct: 521 ELKIVR*LQKYSTFNTTVRLTEP*LK*T*Y 432
Score = 32.2 bits (64), Expect(3) = 6e-060
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 158 RLRTWPAWTMAA 123
RLRTWPAWT AA
Sbjct: 120 RLRTWPAWTTAA 85
Score = 28.6 bits (56), Expect(3) = 5e-058
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 103 PEEGEGPAAIV 135
PEEGEGPAA+V
Sbjct: 65 PEEGEGPAAVV 97
>gb|CN137437.1|CN137437 OX1_57_F09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_F09_A002 3', mRNA sequence
Length = 471
Score = 176 bits (378), Expect(4) = 4e-058
Identities = 67/81 (82%), Positives = 72/81 (88%)
Frame = -2 / -3
Query: 448 RPQDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLV 269
R QDAKHPSCVGCPGVYLLA MNRDHPYEP C QIL+GPPC+GSINPE L DGWGDLLV
Sbjct: 313 RRQDAKHPSCVGCPGVYLLAGMNRDHPYEPPCRQILNGPPCRGSINPETLGEDGWGDLLV 134
Query: 268 LGHLGEQLIVGGLIEEHSVVD 206
LGHLG+QL+ GGL+EEH VVD
Sbjct: 133 LGHLGDQLVEGGLVEEHQVVD 71
Score = 166 bits (356), Expect(3) = 6e-054
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNN VLFDQ T+DKL+SEVPKYKQITPS+LSERLR+NGS ARRAIKDL A+GLIRMVSVH
Sbjct: 71 VNNLVLFDQPTFDKLVSEVPKYKQITPSVLSERLRINGSSARRAIKDLTARGLIRMVSVH 250
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L TL+
Sbjct: 251 SSQQIYTRATNT*GMFCILSTLT 319
Score = 147 bits (316), Expect(3) = 1e-047
Identities = 62/77 (80%), Positives = 63/77 (81%)
Frame = +1 / +1
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR HLR LRGAQVQADHPI P+ A Q *WILGTEGH GSDGKGAHKDGLCSF PAD
Sbjct: 85 ALRPAHLRQVGLRGAQVQADHPIRPLRASQD*WILGTEGH*GSDGKGAHKDGLCSFQPAD 264
Query: 400 IHQGNQHMRGVLRLADV 450
IHQGNQHMR VL L DV
Sbjct: 265 IHQGNQHMRDVLHLVDV 315
Score = 134 bits (287), Expect(3) = 7e-042
Identities = 60/82 (73%), Positives = 63/82 (76%)
Frame = -3 / -1
Query: 450 NVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVICL 271
NV K QN PHVLVALVYICWLE*TETILMSP A+RSLMALRA+DPL LRRS+R DGVICL
Sbjct: 315 NVDKMQNIPHVLVALVYICWLE*TETILMSPLAVRSLMALRAEDPLILRRSERTDGVICL 136
Query: 270 YLGTXXXXXXXXXXXXSTALLT 205
YLGT ST LLT
Sbjct: 135 YLGTSETNLSKVGWSKSTKLLT 70
Score = 103 bits (220), Expect(3) = 1e-032
Identities = 43/50 (86%), Positives = 43/50 (86%)
Frame = +3 / +3
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGR 449
S SGLMDP HGGP RI* Q GS*GWSLFI ASRYTPGQPTHEGCFASC R
Sbjct: 165 SVSGLMDPRHGGPLRI*RQGGS*GWSLFIPASRYTPGQPTHEGCFASCRR 314
Score = 59.7 bits (124), Expect(3) = 6e-054
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +2
Query: 480 ISSLI*SWLDQSYCCVECRIFLRLLYYFKI 569
ISSL SWL QSYCCVEC IFL+L YYFK+
Sbjct: 335 ISSLFQSWLSQSYCCVEC*IFLKLSYYFKL 424
Score = 57.9 bits (120), Expect(3) = 1e-047
Identities = 25/40 (62%), Positives = 31/40 (77%)
Frame = +1 / +3
Query: 475 LLYQV*FNRGSINLTVVLNVEYF*DYCTILRSCFL*HLRP 594
++YQV FN GS+NLTVVLNVEYF* Y TIL S + ++ P
Sbjct: 330 IIYQVYFNHGSVNLTVVLNVEYF*SYRTILSSSYHPNIYP 449
Score = 55.1 bits (114), Expect(4) = 4e-058
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -2 / -1
Query: 574 NMILK*YNNLKNIRHSTQQ*D*SSHD*IKLDI 479
N+ LK*Y+N KNI+HSTQQ*D* SHD* KLDI
Sbjct: 429 NLSLK*YDNFKNIQHSTQQ*D*LSHD*NKLDI 334
Score = 51.5 bits (106), Expect(3) = 1e-032
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 479 YIKFNLIVARSILLLC*MSNIFEIIVLF*DHVFYNI 586
YIKF I+A+SILLLC*M NIFE+IVLF* V I
Sbjct: 334 YIKFISIMAQSILLLC*MLNIFEVIVLF*AQVTIQI 441
Score = 51.0 bits (105), Expect(3) = 7e-042
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 569 DLKIVQ*SQKYSTFNTTVRLIEPRLN*T*Y 480
+LKIV+* QKYSTFNTTVRL EP L *T*Y
Sbjct: 424 ELKIVR*LQKYSTFNTTVRLTEP*LK*T*Y 335
Score = 31.3 bits (62), Expect(4) = 4e-058
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 640 RLVDIPHQD*NLDGNMVL 587
R VDIPHQD LDGN+ L
Sbjct: 471 REVDIPHQDKYLDGNLSL 418
Score = 25.4 bits (49), Expect(3) = 6e-054
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 585 FKTMLPSKF*SW*GISTN 638
FK LPSK+ S *GIST+
Sbjct: 416 FKLKLPSKYLS**GISTS 469
Score = 24.9 bits (48), Expect(3) = 7e-042
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 633 LIFLTKIKIWMAT 595
LIFL +I IWM T
Sbjct: 464 LIFLIRINIWMVT 426
Score = 24.4 bits (47), Expect(3) = 1e-047
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 596 VAIQILILVRNIN 634
V IQI IL+RNIN
Sbjct: 427 VTIQIFILMRNIN 465
Score = 24.0 bits (46), Expect(3) = 1e-032
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +3
Query: 601 HPNFNLGEEYQPI 639
HPN EEYQP+
Sbjct: 432 HPNIYPDEEYQPL 470
Score = 21.7 bits (41), Expect(4) = 4e-058
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1 / -2
Query: 158 RLRTWPA 138
RLRTWPA
Sbjct: 23 RLRTWPA 3
>gb|BG948748.1|BG948748 LG1_330_B09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 176 bits (378), Expect(6) = 9e-056
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRM++VH
Sbjct: 135 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVH 314
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L LS
Sbjct: 315 SSQQIYTRATNT*GMFCILSMLS 383
Score = 166 bits (356), Expect(5) = 2e-049
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = -2 / -1
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 371 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 192
Query: 262 HLGEQLIVGGLIEEHSVVD 206
+LGEQL+VGGL+EEH VVD
Sbjct: 191 NLGEQLVVGGLVEEHRVVD 135
Score = 140 bits (300), Expect(3) = 5e-038
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +1 / +2
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGTEGH GSDGKGAHKD CSF PAD
Sbjct: 149 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTEGH*GSDGKGAHKDDRCSFQPAD 328
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 329 IHQGNQHMRDVLHLVDVI 382
Score = 132 bits (282), Expect(2) = 3e-032
Identities = 60/83 (72%), Positives = 62/83 (74%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMALRAKDPL LRRS+ DGVIC
Sbjct: 382 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVIC 203
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STALLT
Sbjct: 202 LYLGTSESNLS*VAWSKSTALLT 134
Score = 106 bits (226), Expect(3) = 2e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +1
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 229 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 381
Score = 35.9 bits (72), Expect(6) = 9e-056
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1 / +2
Query: 475 LLYQV*FNRGSINLTVVLNV 534
++YQV FN GS+NLTV+LN+
Sbjct: 407 IIYQVYFNHGSVNLTVMLNM 466
Score = 31.3 bits (62), Expect(3) = 5e-038
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 412 ISSLFQSWLSQSYCHVE 462
Score = 29.0 bits (57), Expect(5) = 2e-049
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 463 IQHDSKID*AMIEINLI 413
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 355 GCFASCRCYLV*TTWCCYYI 414
Score = 27.6 bits (54), Expect(6) = 9e-056
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 529 NVEYF*DYCTILRSC 573
+VEY *+YC IL SC
Sbjct: 454 HVEYV*NYCAILSSC 498
Score = 27.6 bits (54), Expect(2) = 3e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 462 FNMTVRLTEP*LK*T*Y 412
Score = 27.6 bits (54), Expect(5) = 2e-049
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 574 NMILK*YNNLKNIRHSTQ 521
NM LK*+NN K+I+H ++
Sbjct: 499 NMSLK*HNNFKHIQHDSK 446
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 411 YIKFISIMAQSILLSC*I 464
Score = 25.8 bits (50), Expect(3) = 5e-038
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 530 MSNIFEIIVLF*DHV 574
M N+F+IIVLF* HV
Sbjct: 455 MLNMFKIIVLF*AHV 499
Score = 25.4 bits (49), Expect(5) = 2e-049
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 158 RLRTWPAWTMAA 123
RLRT PAWT AA
Sbjct: 87 RLRT*PAWTTAA 52
Score = 24.4 bits (47), Expect(6) = 9e-056
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 103 PEEGEGPAAIV 135
PEEG GPAA+V
Sbjct: 32 PEEG*GPAAVV 64
Score = 23.5 bits (45), Expect(6) = 9e-056
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 369 LSMLSSLDDLVLLLY 413
Score = 23.1 bits (44), Expect(5) = 2e-049
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 412 YNSNTKSSRL 383
Score = 22.1 bits (42), Expect(6) = 9e-056
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1 / +1
Query: 586 LRPCCHPNFNL 618
L CCHP F L
Sbjct: 487 LSSCCHPKFIL 519
>gb|BE352878.1|BE352878 LG1_295_E09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 428
Score = 184 bits (396), Expect(2) = 3e-055
Identities = 71/81 (87%), Positives = 74/81 (91%)
Frame = -2 / -2
Query: 448 RPQDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLV 269
R QDAKHPSCVGCPGVYLLA MNRDHPYEP CHQIL+GPPCQGSINPE L DGWGDLLV
Sbjct: 295 RRQDAKHPSCVGCPGVYLLAGMNRDHPYEPPCHQILNGPPCQGSINPETLGEDGWGDLLV 116
Query: 268 LGHLGEQLIVGGLIEEHSVVD 206
LGHLG+QL+VGGLIEEH VVD
Sbjct: 115 LGHLGDQLVVGGLIEEHRVVD 53
Score = 176 bits (379), Expect(2) = 5e-055
Identities = 74/83 (89%), Positives = 82/83 (98%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNN+VLFDQATYDKL+SEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMVSVH
Sbjct: 53 VNNSVLFDQATYDKLVSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVSVH 232
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L TL+
Sbjct: 233 SSQQIYTRATNT*GMFCILSTLT 301
Score = 152 bits (327), Expect(2) = 6e-047
Identities = 64/77 (83%), Positives = 65/77 (84%)
Frame = +1 / +1
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALRSGHLR LRGAQVQADHPI P+ A Q *WILGTEGH GSDGKGAHKDGLCSF PAD
Sbjct: 67 ALRSGHLRQVGLRGAQVQADHPIRPLRASQD*WILGTEGH*GSDGKGAHKDGLCSFQPAD 246
Query: 400 IHQGNQHMRGVLRLADV 450
IHQGNQHMR VL L DV
Sbjct: 247 IHQGNQHMRDVLHLVDV 297
Score = 134 bits (288), Expect(2) = 5e-040
Identities = 62/82 (75%), Positives = 63/82 (76%)
Frame = -3 / -3
Query: 450 NVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVICL 271
NV K QN PHVLVALVYICWLE*TETILMSP AIRSLMALRAKDPL LRRS+R DGVICL
Sbjct: 297 NVDKMQNIPHVLVALVYICWLE*TETILMSPLAIRSLMALRAKDPLILRRSERTDGVICL 118
Query: 270 YLGTXXXXXXXXXXXXSTALLT 205
YLGT ST LLT
Sbjct: 117 YLGTSETNLS*VA*SKSTELLT 52
Score = 116 bits (248), Expect(2) = 2e-034
Identities = 45/50 (90%), Positives = 45/50 (90%)
Frame = +3 / +3
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGR 449
S SGLMDPWHGGP RI*WQ GS*GWSLFI ASRYTPGQPTHEGCFASC R
Sbjct: 147 SVSGLMDPWHGGPLRI*WQGGS*GWSLFIPASRYTPGQPTHEGCFASCRR 296
Score = 59.7 bits (124), Expect(2) = 5e-055
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +3 / +2
Query: 480 ISSLI*SWLDQSYCCVECRIFLRLLYYFKI 569
ISSL SWL QSYCCVEC IFL+L YYFK+
Sbjct: 317 ISSLFQSWLSQSYCCVEC*IFLKLSYYFKL 406
Score = 56.5 bits (117), Expect(2) = 6e-047
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 475 LLYQV*FNRGSINLTVVLNVEYF*DYCTILRS 570
++YQV FN GS+NLTVVLNVEYF* Y TIL S
Sbjct: 312 IIYQVYFNHGSVNLTVVLNVEYF*SYRTILSS 407
Score = 52.4 bits (108), Expect(2) = 3e-055
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = -2 / -3
Query: 571 MILK*YNNLKNIRHSTQQ*D*SSHD*IKLDI 479
+ LK*Y+N KNI+HSTQQ*D* SHD* KLDI
Sbjct: 408 LSLK*YDNFKNIQHSTQQ*D*LSHD*NKLDI 316
Score = 51.0 bits (105), Expect(2) = 2e-034
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 479 YIKFNLIVARSILLLC*MSNIFEIIVLF*DHVFY 580
YIKF I+A+SILLLC*M NIFE+IVLF* ++
Sbjct: 316 YIKFISIMAQSILLLC*MLNIFEVIVLF*AQXYH 417
Score = 51.0 bits (105), Expect(2) = 5e-040
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -1 / -2
Query: 569 DLKIVQ*SQKYSTFNTTVRLIEPRLN*T*Y 480
+LKIV+* QKYSTFNTTVRL EP L *T*Y
Sbjct: 406 ELKIVR*LQKYSTFNTTVRLTEP*LK*T*Y 317
>gb|CX608695.1|CX608695 ANR1_40_E04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_40_E04_A002 3', mRNA sequence
Length = 515
Score = 172 bits (371), Expect(6) = 4e-055
Identities = 73/83 (87%), Positives = 80/83 (96%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLAR AIKDLMA+GLIRM++VH
Sbjct: 125 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARGAIKDLMARGLIRMIAVH 304
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L LS
Sbjct: 305 SSQQIYTRATNT*GMFCILSMLS 373
Score = 166 bits (356), Expect(5) = 2e-049
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = -2 / -2
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 361 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 182
Query: 262 HLGEQLIVGGLIEEHSVVD 206
+LGEQL+VGGL+EEH VVD
Sbjct: 181 NLGEQLVVGGLVEEHRVVD 125
Score = 137 bits (293), Expect(3) = 4e-037
Identities = 58/78 (74%), Positives = 61/78 (78%)
Frame = +1 / +1
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGT GH GSDGKGAHKD CSF PAD
Sbjct: 139 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTGGH*GSDGKGAHKDDRCSFQPAD 318
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 319 IHQGNQHMRDVLHLVDVI 372
Score = 128 bits (275), Expect(2) = 3e-031
Identities = 59/83 (71%), Positives = 61/83 (73%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMA RAKDPL LRRS+ DGVIC
Sbjct: 372 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMAPRAKDPLILRRSESTDGVIC 193
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STALLT
Sbjct: 192 LYLGTSESNLS*VAWSKSTALLT 124
Score = 106 bits (226), Expect(3) = 2e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 219 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 371
Score = 35.9 bits (72), Expect(6) = 4e-055
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1 / +1
Query: 475 LLYQV*FNRGSINLTVVLNV 534
++YQV FN GS+NLTV+LN+
Sbjct: 397 IIYQVYFNHGSVNLTVMLNM 456
Score = 31.3 bits (62), Expect(3) = 4e-037
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 402 ISSLFQSWLSQSYCHVE 452
Score = 29.0 bits (57), Expect(5) = 2e-049
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 453 IQHDSKID*AMIEINLI 403
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +3
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 345 GCFASCRCYLV*TTWCCYYI 404
Score = 27.6 bits (54), Expect(6) = 4e-055
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 529 NVEYF*DYCTILRSC 573
+VEY *+YC IL SC
Sbjct: 444 HVEYV*NYCAILSSC 488
Score = 27.6 bits (54), Expect(2) = 3e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 452 FNMTVRLTEP*LK*T*Y 402
Score = 27.6 bits (54), Expect(5) = 2e-049
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 574 NMILK*YNNLKNIRHSTQ 521
NM LK*+NN K+I+H ++
Sbjct: 489 NMSLK*HNNFKHIQHDSK 436
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 401 YIKFISIMAQSILLSC*I 454
Score = 25.8 bits (50), Expect(3) = 4e-037
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 530 MSNIFEIIVLF*DHV 574
M N+F+IIVLF* HV
Sbjct: 445 MLNMFKIIVLF*AHV 489
Score = 25.4 bits (49), Expect(5) = 2e-049
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 158 RLRTWPAWTMAA 123
RLRT PAWT AA
Sbjct: 77 RLRT*PAWTTAA 42
Score = 24.4 bits (47), Expect(6) = 4e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 103 PEEGEGPAAIV 135
PEEG GPAA+V
Sbjct: 22 PEEG*GPAAVV 54
Score = 23.5 bits (45), Expect(6) = 4e-055
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 359 LSMLSSLDDLVLLLY 403
Score = 23.1 bits (44), Expect(5) = 2e-049
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 402 YNSNTKSSRL 373
Score = 22.1 bits (42), Expect(6) = 4e-055
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1 / +3
Query: 586 LRPCCHPNFNL 618
L CCHP F L
Sbjct: 477 LSSCCHPKFIL 509
>gb|CX608780.1|CX608780 ANR1_40_E04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_40_E04_A002 5', mRNA sequence
Length = 535
Score = 172 bits (371), Expect(6) = 5e-055
Identities = 73/83 (87%), Positives = 80/83 (96%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLAR AIKDLMA+GLIRM++VH
Sbjct: 148 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARGAIKDLMARGLIRMIAVH 327
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L LS
Sbjct: 328 SSQQIYTRATNT*GMFCILSMLS 396
Score = 166 bits (356), Expect(5) = 2e-049
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = -2 / -2
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 384 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 205
Query: 262 HLGEQLIVGGLIEEHSVVD 206
+LGEQL+VGGL+EEH VVD
Sbjct: 204 NLGEQLVVGGLVEEHRVVD 148
Score = 137 bits (293), Expect(3) = 4e-037
Identities = 58/78 (74%), Positives = 61/78 (78%)
Frame = +1 / +3
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGT GH GSDGKGAHKD CSF PAD
Sbjct: 162 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTGGH*GSDGKGAHKDDRCSFQPAD 341
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 342 IHQGNQHMRDVLHLVDVI 395
Score = 128 bits (275), Expect(2) = 3e-031
Identities = 59/83 (71%), Positives = 61/83 (73%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMA RAKDPL LRRS+ DGVIC
Sbjct: 395 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMAPRAKDPLILRRSESTDGVIC 216
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STALLT
Sbjct: 215 LYLGTSESNLS*VAWSKSTALLT 147
Score = 106 bits (226), Expect(3) = 2e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +2
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 242 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 394
Score = 35.9 bits (72), Expect(6) = 5e-055
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 475 LLYQV*FNRGSINLTVVLNV 534
++YQV FN GS+NLTV+LN+
Sbjct: 420 IIYQVYFNHGSVNLTVMLNM 479
Score = 31.3 bits (62), Expect(3) = 4e-037
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 425 ISSLFQSWLSQSYCHVE 475
Score = 29.0 bits (57), Expect(5) = 2e-049
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 476 IQHDSKID*AMIEINLI 426
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 368 GCFASCRCYLV*TTWCCYYI 427
Score = 27.6 bits (54), Expect(6) = 5e-055
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 529 NVEYF*DYCTILRSC 573
+VEY *+YC IL SC
Sbjct: 467 HVEYV*NYCAILSSC 511
Score = 27.6 bits (54), Expect(2) = 3e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 475 FNMTVRLTEP*LK*T*Y 425
Score = 27.6 bits (54), Expect(5) = 2e-049
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 574 NMILK*YNNLKNIRHSTQ 521
NM LK*+NN K+I+H ++
Sbjct: 512 NMSLK*HNNFKHIQHDSK 459
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 424 YIKFISIMAQSILLSC*I 477
Score = 25.8 bits (50), Expect(3) = 4e-037
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 530 MSNIFEIIVLF*DHV 574
M N+F+IIVLF* HV
Sbjct: 468 MLNMFKIIVLF*AHV 512
Score = 25.4 bits (49), Expect(5) = 2e-049
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 158 RLRTWPAWTMAA 123
RLRT PAWT AA
Sbjct: 100 RLRT*PAWTTAA 65
Score = 24.4 bits (47), Expect(6) = 5e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 103 PEEGEGPAAIV 135
PEEG GPAA+V
Sbjct: 45 PEEG*GPAAVV 77
Score = 23.5 bits (45), Expect(6) = 5e-055
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 382 LSMLSSLDDLVLLLY 426
Score = 23.1 bits (44), Expect(5) = 2e-049
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 425 YNSNTKSSRL 396
Score = 22.1 bits (42), Expect(6) = 5e-055
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1 / +2
Query: 586 LRPCCHPNFNL 618
L CCHP F L
Sbjct: 500 LSSCCHPKFIL 532
>gb|CF772686.1|CF772686 DSBF1_38_B07.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_38_B07_A010 3', mRNA sequence
Length = 462
Score = 176 bits (378), Expect(5) = 2e-053
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRM++VH
Sbjct: 73 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVH 252
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L LS
Sbjct: 253 SSQQIYTRATNT*GMFCILSMLS 321
Score = 166 bits (356), Expect(4) = 5e-047
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = -2 / -1
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 309 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 130
Query: 262 HLGEQLIVGGLIEEHSVVD 206
+LGEQL+VGGL+EEH VVD
Sbjct: 129 NLGEQLVVGGLVEEHRVVD 73
Score = 140 bits (300), Expect(3) = 5e-038
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +1 / +3
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGTEGH GSDGKGAHKD CSF PAD
Sbjct: 87 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTEGH*GSDGKGAHKDDRCSFQPAD 266
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 267 IHQGNQHMRDVLHLVDVI 320
Score = 132 bits (282), Expect(2) = 3e-032
Identities = 60/83 (72%), Positives = 62/83 (74%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMALRAKDPL LRRS+ DGVIC
Sbjct: 320 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVIC 141
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STALLT
Sbjct: 140 LYLGTSESNLS*VAWSKSTALLT 72
Score = 106 bits (226), Expect(3) = 2e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +2
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 167 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 319
Score = 35.9 bits (72), Expect(5) = 2e-053
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 475 LLYQV*FNRGSINLTVVLNV 534
++YQV FN GS+NLTV+LN+
Sbjct: 345 IIYQVYFNHGSVNLTVMLNM 404
Score = 31.3 bits (62), Expect(3) = 5e-038
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +2
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 350 ISSLFQSWLSQSYCHVE 400
Score = 29.0 bits (57), Expect(4) = 5e-047
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 401 IQHDSKID*AMIEINLI 351
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 293 GCFASCRCYLV*TTWCCYYI 352
Score = 27.6 bits (54), Expect(5) = 2e-053
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 529 NVEYF*DYCTILRSC 573
+VEY *+YC IL SC
Sbjct: 392 HVEYV*NYCAILSSC 436
Score = 27.6 bits (54), Expect(2) = 3e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 400 FNMTVRLTEP*LK*T*Y 350
Score = 27.6 bits (54), Expect(4) = 5e-047
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 574 NMILK*YNNLKNIRHSTQ 521
NM LK*+NN K+I+H ++
Sbjct: 437 NMSLK*HNNFKHIQHDSK 384
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 349 YIKFISIMAQSILLSC*I 402
Score = 25.8 bits (50), Expect(3) = 5e-038
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 530 MSNIFEIIVLF*DHV 574
M N+F+IIVLF* HV
Sbjct: 393 MLNMFKIIVLF*AHV 437
Score = 23.5 bits (45), Expect(5) = 2e-053
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 307 LSMLSSLDDLVLLLY 351
Score = 23.1 bits (44), Expect(4) = 5e-047
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 350 YNSNTKSSRL 321
Score = 21.7 bits (41), Expect(5) = 2e-053
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = +1 / +2
Query: 586 LRPCCHPNF 612
L CCHP F
Sbjct: 425 LSSCCHPKF 451
>gb|BG047650.1|BG047650 OV1_26_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 430
Score = 174 bits (374), Expect(4) = 1e-051
Identities = 73/82 (89%), Positives = 80/82 (97%)
Frame = +2 / +2
Query: 209 NNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVHS 388
NNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRM++VHS
Sbjct: 44 NNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVHS 223
Query: 389 SQQIYTRATNT*GVFCVLRTLS 454
SQQIYTRATNT*G+FC+L LS
Sbjct: 224 SQQIYTRATNT*GMFCILSMLS 289
Score = 163 bits (350), Expect(4) = 3e-046
Identities = 64/78 (82%), Positives = 69/78 (88%)
Frame = -2 / -1
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 277 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 98
Query: 262 HLGEQLIVGGLIEEHSVV 209
+LGEQL+VGGL+EEH VV
Sbjct: 97 NLGEQLVVGGLVEEHRVV 44
Score = 140 bits (300), Expect(3) = 5e-038
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +1 / +1
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGTEGH GSDGKGAHKD CSF PAD
Sbjct: 55 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTEGH*GSDGKGAHKDDRCSFQPAD 234
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 235 IHQGNQHMRDVLHLVDVI 288
Score = 129 bits (277), Expect(2) = 2e-031
Identities = 59/82 (71%), Positives = 61/82 (74%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMALRAKDPL LRRS+ DGVIC
Sbjct: 288 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVIC 109
Query: 273 LYLGTXXXXXXXXXXXXSTALL 208
LYLGT STALL
Sbjct: 108 LYLGTSESNLS*VAWSKSTALL 43
Score = 106 bits (226), Expect(3) = 2e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 135 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 287
Score = 35.9 bits (72), Expect(4) = 1e-051
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1 / +1
Query: 475 LLYQV*FNRGSINLTVVLNV 534
++YQV FN GS+NLTV+LN+
Sbjct: 313 IIYQVYFNHGSVNLTVMLNM 372
Score = 31.3 bits (62), Expect(3) = 5e-038
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 318 ISSLFQSWLSQSYCHVE 368
Score = 29.0 bits (57), Expect(4) = 3e-046
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 369 IQHDSKID*AMIEINLI 319
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +3
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 261 GCFASCRCYLV*TTWCCYYI 320
Score = 27.6 bits (54), Expect(4) = 1e-051
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 529 NVEYF*DYCTILRSC 573
+VEY *+YC IL SC
Sbjct: 360 HVEYV*NYCAILSSC 404
Score = 27.6 bits (54), Expect(2) = 2e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 368 FNMTVRLTEP*LK*T*Y 318
Score = 27.6 bits (54), Expect(4) = 3e-046
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 574 NMILK*YNNLKNIRHSTQ 521
NM LK*+NN K+I+H ++
Sbjct: 405 NMSLK*HNNFKHIQHDSK 352
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 317 YIKFISIMAQSILLSC*I 370
Score = 25.8 bits (50), Expect(3) = 5e-038
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 530 MSNIFEIIVLF*DHV 574
M N+F+IIVLF* HV
Sbjct: 361 MLNMFKIIVLF*AHV 405
Score = 23.5 bits (45), Expect(4) = 1e-051
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 275 LSMLSSLDDLVLLLY 319
Score = 23.1 bits (44), Expect(4) = 3e-046
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 318 YNSNTKSSRL 289
>gb|BG048004.1|BG048004 OV1_26_E03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 371
Score = 176 bits (378), Expect(3) = 3e-049
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRM++VH
Sbjct: 42 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVH 221
Query: 386 SSQQIYTRATNT*GVFCVLRTLS 454
SSQQIYTRATNT*G+FC+L LS
Sbjct: 222 SSQQIYTRATNT*GMFCILSMLS 290
Score = 166 bits (356), Expect(3) = 4e-044
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = -2 / -1
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 278 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 99
Query: 262 HLGEQLIVGGLIEEHSVVD 206
+LGEQL+VGGL+EEH VVD
Sbjct: 98 NLGEQLVVGGLVEEHRVVD 42
Score = 140 bits (300), Expect(2) = 9e-036
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +1 / +2
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGTEGH GSDGKGAHKD CSF PAD
Sbjct: 56 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTEGH*GSDGKGAHKDDRCSFQPAD 235
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 236 IHQGNQHMRDVLHLVDVI 289
Score = 132 bits (282), Expect(2) = 3e-032
Identities = 60/83 (72%), Positives = 62/83 (74%)
Frame = -3 / -2
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMALRAKDPL LRRS+ DGVIC
Sbjct: 289 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVIC 110
Query: 273 LYLGTXXXXXXXXXXXXSTALLT 205
LYLGT STALLT
Sbjct: 109 LYLGTSESNLS*VAWSKSTALLT 41
Score = 106 bits (226), Expect(3) = 2e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +1
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 136 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 288
Score = 35.4 bits (71), Expect(3) = 3e-049
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1 / +2
Query: 475 LLYQV*FNRGSINLTVVLN 531
++YQV FN GS+NLTV+LN
Sbjct: 314 IIYQVYFNHGSVNLTVMLN 370
Score = 31.3 bits (62), Expect(2) = 9e-036
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 319 ISSLFQSWLSQSYCHVE 369
Score = 29.0 bits (57), Expect(3) = 4e-044
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 370 IQHDSKID*AMIEINLI 320
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 262 GCFASCRCYLV*TTWCCYYI 321
Score = 27.6 bits (54), Expect(2) = 3e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 369 FNMTVRLTEP*LK*T*Y 319
Score = 26.7 bits (52), Expect(3) = 2e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 318 YIKFISIMAQSILLSC*I 371
Score = 23.5 bits (45), Expect(3) = 3e-049
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 276 LSMLSSLDDLVLLLY 320
Score = 23.1 bits (44), Expect(3) = 4e-044
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 319 YNSNTKSSRL 290
>gb|BE593343.1|BE593343 WS1_100_F02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 329
Score = 169 bits (363), Expect(3) = 2e-047
Identities = 71/81 (87%), Positives = 78/81 (96%)
Frame = +2 / +2
Query: 212 NAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVHSS 391
N VLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRM++VHSS
Sbjct: 2 NPVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVHSS 181
Query: 392 QQIYTRATNT*GVFCVLRTLS 454
QQIYTRATNT*G+FC+L LS
Sbjct: 182 QQIYTRATNT*GMFCILSMLS 244
Score = 161 bits (346), Expect(3) = 5e-043
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = -2 / -2
Query: 442 QDAKHPSCVGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLG 263
QDAKHPSCVGCPGVYLLA MN DHPYEP CHQIL+GPPCQGSI+PE L G GDLLVLG
Sbjct: 232 QDAKHPSCVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLG 53
Query: 262 HLGEQLIVGGLIEEHSV 212
+LGEQL+VGGL+EEH V
Sbjct: 52 NLGEQLVVGGLVEEHRV 2
Score = 140 bits (300), Expect(3) = 6e-036
Identities = 59/78 (75%), Positives = 62/78 (79%)
Frame = +1 / +1
Query: 220 ALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PAD 399
ALR GHLR ALRG+QVQADHP+ + A Q WILGTEGH GSDGKGAHKD CSF PAD
Sbjct: 10 ALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTEGH*GSDGKGAHKDDRCSFQPAD 189
Query: 400 IHQGNQHMRGVLRLADVI 453
IHQGNQHMR VL L DVI
Sbjct: 190 IHQGNQHMRDVLHLVDVI 243
Score = 127 bits (271), Expect(3) = 1e-031
Identities = 54/65 (83%), Positives = 56/65 (86%)
Frame = -3 / -3
Query: 453 DNVRKTQNTPHVLVALVYICWLE*TETILMSPFAIRSLMALRAKDPLTLRRSDRMDGVIC 274
DN+ K QN PHVLVALVYICWLE*T ILMSP AIRSLMALRAKDPL LRRS+ DGVIC
Sbjct: 243 DNIDKMQNIPHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVIC 64
Query: 273 LYLGT 259
LYLGT
Sbjct: 63 LYLGT 49
Score = 106 bits (226), Expect(3) = 1e-027
Identities = 43/51 (84%), Positives = 43/51 (84%)
Frame = +3 / +3
Query: 300 SASGLMDPWHGGPSRI*WQRGS*GWSLFILASRYTPGQPTHEGCFASCGRY 452
S SG MDPWHGGP RI*WQ GS*G SLFI ASRYTPGQPTHEGCFASC Y
Sbjct: 90 SVSGSMDPWHGGPLRI*WQGGS*G*SLFIPASRYTPGQPTHEGCFASCRCY 242
Score = 35.9 bits (72), Expect(3) = 2e-047
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1 / +1
Query: 475 LLYQV*FNRGSINLTVVLNV 534
++YQV FN GS+NLTV+LN+
Sbjct: 268 IIYQVYFNHGSVNLTVMLNM 327
Score = 31.3 bits (62), Expect(3) = 6e-036
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 480 ISSLI*SWLDQSYCCVE 530
ISSL SWL QSYC VE
Sbjct: 273 ISSLFQSWLSQSYCHVE 323
Score = 29.0 bits (57), Expect(3) = 5e-043
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 531 IQHNSKIDRATIKLNLI 481
IQH+SKID A I++NLI
Sbjct: 324 IQHDSKID*AMIEINLI 274
Score = 28.6 bits (56), Expect(3) = 1e-027
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +3
Query: 425 GVFCVLRTLSV*TT*CCYYI 484
G F R V*TT CCYYI
Sbjct: 216 GCFASCRCYLV*TTWCCYYI 275
Score = 27.6 bits (54), Expect(3) = 1e-031
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 530 FNTTVRLIEPRLN*T*Y 480
FN TVRL EP L *T*Y
Sbjct: 323 FNMTVRLTEP*LK*T*Y 273
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 479 YIKFNLIVARSILLLC*M 532
YIKF I+A+SILL C*+
Sbjct: 272 YIKFISIMAQSILLSC*I 325
Score = 23.5 bits (45), Expect(3) = 2e-047
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 439 LADVISLDDLMLLLY 483
L+ + SLDDL+LLLY
Sbjct: 230 LSMLSSLDDLVLLLY 274
Score = 23.1 bits (44), Expect(3) = 5e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 482 YNSNIKSSRL 453
YNSN KSSRL
Sbjct: 273 YNSNTKSSRL 244
Score = 20.3 bits (38), Expect(3) = 1e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 483 I**QHQVV*T 454
I**QHQVV*T
Sbjct: 274 I**QHQVV*T 245
Score = 18.0 bits (33), Expect(3) = 6e-036
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 456 SRRLDVAII 482
SRRL VAII
Sbjct: 247 SRRLGVAII 273
>gb|CD432106.1|CD432106 ETH1_26_A06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_A06_A002 3', mRNA sequence
Length = 611
Score = 163 bits (350), Expect(2) = 2e-041
Identities = 70/74 (94%), Positives = 74/74 (100%)
Frame = +2 / +3
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMV+VH
Sbjct: 195 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 374
Query: 386 SSQQIYTRATNT*G 427
SSQQIYTRATNT*G
Sbjct: 375 SSQQIYTRATNT*G 416
Score = 116 bits (249), Expect = 3e-025
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = -2 / -1
Query: 418 VGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIV 239
+GCPGV LLA ++ DHP E HQ+LDGPP +G+I+P+AL DG GDLLVLGHL EQL+V
Sbjct: 407 IGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHLREQLVV 228
Query: 238 GGLIEEHSVV 209
GGL+E+HSVV
Sbjct: 227 GGLVEQHSVV 198
Score = 105 bits (223), Expect = 1e-021
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +1 / +2
Query: 217 CALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PA 396
CA+R GHLR AAL GAQVQADHP+ P+ A + W+ +EGHQG DG H DG C PA
Sbjct: 206 CAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPA 385
Query: 397 DIHQGNQHMR 426
D+HQGNQ++R
Sbjct: 386 DLHQGNQYLR 415
Score = 27.2 bits (53), Expect(2) = 2e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 103 PEEGEGPAAIV 135
PEEG+GPAA+V
Sbjct: 92 PEEGQGPAAVV 124
>gb|CD432203.1|CD432203 ETH1_26_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_A06_A002 5', mRNA sequence
Length = 609
Score = 163 bits (350), Expect(2) = 2e-041
Identities = 70/74 (94%), Positives = 74/74 (100%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMV+VH
Sbjct: 197 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 376
Query: 386 SSQQIYTRATNT*G 427
SSQQIYTRATNT*G
Sbjct: 377 SSQQIYTRATNT*G 418
Score = 116 bits (249), Expect = 3e-025
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = -2 / -3
Query: 418 VGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIV 239
+GCPGV LLA ++ DHP E HQ+LDGPP +G+I+P+AL DG GDLLVLGHL EQL+V
Sbjct: 409 IGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHLREQLVV 230
Query: 238 GGLIEEHSVV 209
GGL+E+HSVV
Sbjct: 229 GGLVEQHSVV 200
Score = 105 bits (223), Expect = 1e-021
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +1 / +1
Query: 217 CALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PA 396
CA+R GHLR AAL GAQVQADHP+ P+ A + W+ +EGHQG DG H DG C PA
Sbjct: 208 CAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPA 387
Query: 397 DIHQGNQHMR 426
D+HQGNQ++R
Sbjct: 388 DLHQGNQYLR 417
Score = 27.2 bits (53), Expect(2) = 2e-041
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 103 PEEGEGPAAIV 135
PEEG+GPAA+V
Sbjct: 94 PEEGQGPAAVV 126
>gb|AW679925.1|AW679925 WS1_33_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 163 bits (350), Expect = 3e-039
Identities = 70/74 (94%), Positives = 74/74 (100%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMV+VH
Sbjct: 67 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 246
Query: 386 SSQQIYTRATNT*G 427
SSQQIYTRATNT*G
Sbjct: 247 SSQQIYTRATNT*G 288
Score = 116 bits (249), Expect = 3e-025
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = -2 / -3
Query: 418 VGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIV 239
+GCPGV LLA ++ DHP E HQ+LDGPP +G+I+P+AL DG GDLLVLGHL EQL+V
Sbjct: 279 IGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHLREQLVV 100
Query: 238 GGLIEEHSVV 209
GGL+E+HSVV
Sbjct: 99 GGLVEQHSVV 70
Score = 105 bits (223), Expect = 1e-021
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +1 / +3
Query: 217 CALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PA 396
CA+R GHLR AAL GAQVQADHP+ P+ A + W+ +EGHQG DG H DG C PA
Sbjct: 78 CAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPA 257
Query: 397 DIHQGNQHMR 426
D+HQGNQ++R
Sbjct: 258 DLHQGNQYLR 287
>gb|AW745353.1|AW745353 WS1_33_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 488
Score = 163 bits (350), Expect = 3e-039
Identities = 70/74 (94%), Positives = 74/74 (100%)
Frame = +2 / +1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMV+VH
Sbjct: 67 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 246
Query: 386 SSQQIYTRATNT*G 427
SSQQIYTRATNT*G
Sbjct: 247 SSQQIYTRATNT*G 288
Score = 116 bits (249), Expect = 3e-025
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = -2 / -3
Query: 418 VGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIV 239
+GCPGV LLA ++ DHP E HQ+LDGPP +G+I+P+AL DG GDLLVLGHL EQL+V
Sbjct: 279 IGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHLREQLVV 100
Query: 238 GGLIEEHSVV 209
GGL+E+HSVV
Sbjct: 99 GGLVEQHSVV 70
Score = 105 bits (223), Expect = 1e-021
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +1 / +3
Query: 217 CALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PA 396
CA+R GHLR AAL GAQVQADHP+ P+ A + W+ +EGHQG DG H DG C PA
Sbjct: 78 CAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPA 257
Query: 397 DIHQGNQHMR 426
D+HQGNQ++R
Sbjct: 258 DLHQGNQYLR 287
>gb|CF484027.1|CF484027 POL1_2_D10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_2_D10_A002 5', mRNA sequence
Length = 502
Score = 159 bits (341), Expect = 5e-038
Identities = 69/74 (93%), Positives = 73/74 (98%)
Frame = +2 / -1
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVH 385
VNNAVLFDQAT DKLLSEVPKYKQITPS+LSERLR+NGSLARRAIKDLMA+GLIRMV+VH
Sbjct: 433 VNNAVLFDQATCDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 254
Query: 386 SSQQIYTRATNT*G 427
SSQQIYTRATNT*G
Sbjct: 253 SSQQIYTRATNT*G 212
Score = 115 bits (245), Expect = 9e-025
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = -2 / +2
Query: 418 VGCPGVYLLARMNRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIV 239
+GCPGV LLA ++ DHP E HQ+LDGPP +G+I+P+AL DG GDLLVLGHL EQL+
Sbjct: 221 IGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHLREQLVA 400
Query: 238 GGLIEEHSVV 209
GGL+E+HSVV
Sbjct: 401 GGLVEQHSVV 430
Score = 105 bits (223), Expect = 1e-021
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = +1 / -3
Query: 217 CALRSGHLR*AALRGAQVQADHPIHPI*APQG*WILGTEGHQGSDGKGAHKDGLCSF*PA 396
CA+R GHLR AAL GAQVQADHP+ P+ A + W+ +EGHQG DG H DG C PA
Sbjct: 422 CAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPA 243
Query: 397 DIHQGNQHMR 426
D+HQGNQ++R
Sbjct: 242 DLHQGNQYLR 213
>gb|BE593549.1|BE593549 WS1_100_F02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 325
Score = 123 bits (264), Expect(2) = 7e-029
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = +2 / +2
Query: 206 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSV 382
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLR+NGSLARRA DLMA+GLIRM++V
Sbjct: 149 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAXXDLMARGLIRMIAV 325
Score = 116 bits (248), Expect(2) = 6e-027
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = -2 / -1
Query: 382 NRDHPYEPLCHQILDGPPCQGSINPEALR*DGWGDLLVLGHLGEQLIVGGLIEEHSVVD 206
N DHPYEP CHQIL GPPCQGSI+PE L G GDLLVLG+LGEQL+VGGL+EEH VVD
Sbjct: 325 NSDHPYEPPCHQILXGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLVVGGLVEEHRVVD 149
Score = 25.4 bits (49), Expect(2) = 6e-027
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 158 RLRTWPAWTMAA 123
RLRT PAWT AA
Sbjct: 101 RLRT*PAWTTAA 66
Score = 24.4 bits (47), Expect(2) = 7e-029
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 103 PEEGEGPAAIV 135
PEEG GPAA+V
Sbjct: 46 PEEG*GPAAVV 78
>gb|BF656971.1|BF656971 OV2_19_D04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 360
Score = 120 bits (257), Expect = 2e-026
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = +2 / -3
Query: 260 VPKYKQITPSILSERLRVNGSLARRAIKDLMAKGLIRMVSVHSSQQIYTRATNT*G 427
VPKYKQITPS+LSERLR+NGSLARRAIKDLMA+G IRMV+VHSSQQIYTRATNT*G
Sbjct: 358 VPKYKQITPSVLSERLRINGSLARRAIKDLMARGFIRMVAVHSSQQIYTRATNT*G 191
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 572,545,298
Number of Sequences: 832831
Number of extensions: 7148725
Number of successful extensions: 44631
Number of sequences better than 1.0e-020: 20
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21742903806
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)