TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.458
(708 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW746700.1|AW746700 WS1_54_C07.g1_A002 Water-stressed 1 ... 289 2e-096
gb|BG240706.1|BG240706 OV1_37_C05.g1_A002 Ovary 1 (OV1) Sor... 283 3e-093
gb|AW747615.1|AW747615 WS1_74_B12.g1_A002 Water-stressed 1 ... 272 2e-091
gb|CN127984.1|CN127984 RHOH1_26_F11.b1_A002 Acid- and alkal... 272 4e-091
gb|AW746591.1|AW746591 WS1_54_C07.b1_A002 Water-stressed 1 ... 289 1e-089
gb|AW925004.1|AW925004 WS1_74_B12.b1_A002 Water-stressed 1 ... 289 2e-083
gb|BG241024.1|BG241024 OV1_37_C05.b1_A002 Ovary 1 (OV1) Sor... 289 2e-079
gb|AI724008.1|AI724008 RHIZ1_27_C05.y1_A001 Rhizome1 (RHIZ1... 259 2e-068
gb|BE918059.1|BE918059 OV1_1_D08.b1_A002 Ovary 1 (OV1) Sorg... 259 2e-068
gb|BE918279.1|BE918279 OV1_1_D08.g1_A002 Ovary 1 (OV1) Sorg... 259 2e-068
gb|BE919049.1|BE919049 FM1_3_D09.g1_A003 Floral-Induced Mer... 259 2e-068
gb|BE919123.1|BE919123 FM1_3_D09.b1_A003 Floral-Induced Mer... 259 2e-068
gb|BG240885.1|BG240885 OV1_39_E03.g1_A002 Ovary 1 (OV1) Sor... 259 2e-068
gb|BG241207.1|BG241207 OV1_39_E03.b1_A002 Ovary 1 (OV1) Sor... 258 9e-068
gb|CW360969.1|CW360969 fsbb001f029e21f0 Sorghum methylation... 191 3e-067
gb|CW408197.1|CW408197 fsbb001f101p17k0 Sorghum methylation... 191 6e-063
gb|CW277987.1|CW277987 104_752_11406317_116_35679_027 Sorgh... 191 6e-061
gb|CF756028.1|CF756028 DSAF1_3_C04.b1_A011 Drought-stressed... 234 1e-060
gb|CF756106.1|CF756106 DSAF1_3_C04.g1_A011 Drought-stressed... 234 1e-060
gb|CF758759.1|CF758759 DSAF1_36_C08.g1_A011 Drought-stresse... 234 1e-060
gb|CW331951.1|CW331951 104_829_11481169_116_36027_007 Sorgh... 178 2e-059
gb|CW360970.1|CW360970 fsbb001f029e21k0 Sorghum methylation... 184 7e-059
gb|CL150834.1|CL150834 104_332_10778813_114_31357_365 Sorgh... 178 1e-058
gb|CW130736.1|CW130736 104_513_11115281_148_34776_073 Sorgh... 179 9e-055
gb|CF757907.1|CF757907 DSAF1_24_G07.g1_A011 Drought-stresse... 214 1e-054
gb|CL150835.1|CL150835 104_332_10778813_116_31358_365 Sorgh... 176 3e-054
gb|CL158153.1|CL158153 104_346_10803346_116_31376_322 Sorgh... 191 1e-053
gb|CW144118.1|CW144118 104_536_11137773_148_34962_093 Sorgh... 188 3e-053
gb|CL174275.1|CL174275 104_378_10891491_148_31770_243 Sorgh... 188 7e-052
gb|CW388706.1|CW388706 fsbb001f073j08k0 Sorghum methylation... 188 9e-052
gb|CL188488.1|CL188488 104_405_10901635_116_32454_080 Sorgh... 164 2e-050
gb|CW064610.1|CW064610 104_310_10522666_114_30142 Sorghum m... 179 1e-049
gb|CL158152.1|CL158152 104_346_10803346_114_31375_322 Sorgh... 177 1e-049
gb|CW139265.1|CW139265 104_529_11135145_148_34908_041 Sorgh... 160 1e-049
gb|CW139264.1|CW139264 104_529_11135145_116_34904_041 Sorgh... 178 6e-048
gb|AW746621.1|AW746621 WS1_54_E12.b1_A002 Water-stressed 1 ... 188 1e-046
gb|AW746661.1|AW746661 WS1_54_E12.g1_A002 Water-stressed 1 ... 188 1e-046
gb|CW363805.1|CW363805 fsbb001f035j05k0 Sorghum methylation... 149 5e-046
gb|CW194713.1|CW194713 104_618_11180246_148_36800_063 Sorgh... 165 6e-044
gb|CW471713.1|CW471713 fsbb001f225n01f0 Sorghum methylation... 158 7e-038
gb|AI724793.1|AI724793 RHIZ1_9_C11.y2_A001 Rhizome1 (RHIZ1)... 86 5e-035
gb|CW118310.1|CW118310 104_494_11108134_148_34621_083 Sorgh... 133 2e-034
gb|CW128228.1|CW128228 104_509_11113891_148_34748_068 Sorgh... 109 3e-034
gb|AI724042.1|AI724042 RHIZ1_25_E09.y1_A001 Rhizome1 (RHIZ1... 86 1e-029
gb|CW379489.1|CW379489 fsbb001f058m16k0 Sorghum methylation... 80 8e-028
gb|CF757903.1|CF757903 DSAF1_24_F07.g1_A011 Drought-stresse... 122 8e-027
gb|CL175100.1|CL175100 104_380_10892166_148_31766_150 Sorgh... 86 9e-024
gb|CL174634.1|CL174634 104_379_10891782_148_31768_150 Sorgh... 86 9e-024
>gb|AW746700.1|AW746700 WS1_54_C07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 618
Score = 289 bits (626), Expect(2) = 2e-096
Identities = 122/130 (93%), Positives = 123/130 (94%)
Frame = +1 / +3
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 249
S GRS EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG
Sbjct: 36 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 215
Query: 250 KRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 429
KRMAYIYKAKTKSSGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS
Sbjct: 216 KRMAYIYKAKTKSSGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 395
Query: 430 I*R*SECVED 459
I*R* E +ED
Sbjct: 396 I*R*FEGLED 425
Score = 255 bits (551), Expect(2) = 2e-086
Identities = 112/132 (84%), Positives = 114/132 (86%)
Frame = -2 / -3
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 436 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 257
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICTSDVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 256 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWFDLDLLYPRTVPRT*SLTRCPV 77
Query: 110 RPFTISTLQLLP 75
RPFTIS LLP
Sbjct: 76 RPFTISPPLLLP 41
Score = 196 bits (422), Expect(3) = 2e-071
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +3 / +2
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREAD 257
QK +RRDGEGAHGAAREALRPGHRP IQ VQVEPVRD+VAGADRGGEHQGGRRVVLR+AD
Sbjct: 44 QKQRRRDGEGAHGAAREALRPGHRPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVLRQAD 223
Query: 258 GLHLQGQDQEQRHPLPLHLGQGRPPA 335
GLHLQGQDQEQRHPLPLHLGQG PPA
Sbjct: 224 GLHLQGQDQEQRHPLPLHLGQGHPPA 301
Score = 138 bits (295), Expect(3) = 1e-072
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHALPRAPLHHL AAAS
Sbjct: 224 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALPRAPLHHLAAAAS 45
Query: 78 A 76
A
Sbjct: 44 A 42
Score = 92.7 bits (196), Expect(3) = 1e-072
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1 / -2
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 434 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADDAGVAVR 297
Score = 85.8 bits (181), Expect(2) = 2e-086
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2 / -3
Query: 596 IILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
I+ VIHNTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 565 IMFQVIHNTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 419
Score = 84.5 bits (178), Expect(2) = 2e-096
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1 / +3
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL IT +II
Sbjct: 432 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL*IT*NII 566
Score = 83.1 bits (175), Expect(3) = 1e-072
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -1
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 558 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 421
Score = 68.0 bits (142), Expect(3) = 2e-071
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP ASKDNL VWR + F
Sbjct: 343 CRRNPWAARSGSSCTPVASKDNLKVWRIMLF 435
Score = 60.2 bits (125), Expect(3) = 5e-029
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / -1
Query: 469 EEKGPPHIQIIFRCCWGT*TP*PYGPWIPXXXXXXXXXXXXRSCHA 332
E+ PP++QIIFRC WGT* P*P GPWIP RSC A
Sbjct: 435 EKHDPPNLQIIFRCYWGT*RP*PCGPWIPAAGWT*TWRGRRRSCRA 298
Score = 54.2 bits (112), Expect(3) = 5e-029
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3 / -1
Query: 220 CSPPRSAPAT*SRTGSTWTACIQ 152
CSPPRSAPAT SRTGSTWT+CI+
Sbjct: 186 CSPPRSAPATWSRTGSTWTSCIR 118
Score = 52.4 bits (108), Expect(3) = 5e-029
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = -1 / -2
Query: 594 NTSSDP*HQNSENFKWFSDRQXXXXXXXXXXXXTRTAEDKI*KKRVL 454
N SSD *HQN ENFK FS+RQ TRTA DKI*KK ++
Sbjct: 563 NVSSDS*HQNLENFKGFSNRQLNLLTLNLNTTLTRTALDKI*KKSMI 423
Score = 46.0 bits (94), Expect(3) = 2e-071
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +3 / +2
Query: 522 AG*AVYLRTI*SSLSFGVMDHWKYY 596
AG*AVYLRT+*SS SFGVM+H K+Y
Sbjct: 491 AG*AVYLRTL*SSPSFGVMNHLKHY 565
>gb|BG240706.1|BG240706 OV1_37_C05.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 491
Score = 283 bits (613), Expect(2) = 3e-093
Identities = 118/122 (96%), Positives = 119/122 (97%)
Frame = +1 / +2
Query: 94 EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYK 273
EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYK
Sbjct: 5 EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYK 184
Query: 274 AKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R*SECV 453
AKTKSSGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R* E +
Sbjct: 185 AKTKSSGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R*FEGL 364
Query: 454 ED 459
ED
Sbjct: 365 ED 370
Score = 251 bits (542), Expect(2) = 1e-083
Identities = 109/126 (86%), Positives = 111/126 (88%)
Frame = -2 / -3
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 381 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 202
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICTSDVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 201 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWFDLDLLYPRTVPRT*SLTRCPV 22
Query: 110 RPFTIS 93
RPFTIS
Sbjct: 21 RPFTIS 4
Score = 192 bits (413), Expect(3) = 9e-067
Identities = 77/82 (93%), Positives = 79/82 (96%)
Frame = +3 / +1
Query: 90 RRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHL 269
RRDGEGAHGAAREALRPGHRP IQ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHL
Sbjct: 1 RRDGEGAHGAAREALRPGHRPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHL 180
Query: 270 QGQDQEQRHPLPLHLGQGRPPA 335
QGQDQEQRHPLPLHLGQG PPA
Sbjct: 181 QGQDQEQRHPLPLHLGQGHPPA 246
Score = 129 bits (277), Expect(3) = 3e-068
Identities = 52/55 (94%), Positives = 53/55 (96%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHHL 94
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHALPRAPLHHL
Sbjct: 169 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALPRAPLHHL 5
Score = 92.7 bits (196), Expect(3) = 3e-068
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1 / -2
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 379 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADDAGVAVR 242
Score = 80.3 bits (169), Expect(2) = 1e-083
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 577 ITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 491 ITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 366
Score = 79.9 bits (168), Expect(2) = 3e-093
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = +1 / +2
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVL 576
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL
Sbjct: 377 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL 490
Score = 76.7 bits (161), Expect(3) = 3e-068
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = -2 / -3
Query: 575 NTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
NTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 489 NTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 364
Score = 68.0 bits (142), Expect(3) = 9e-067
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP ASKDNL VWR + F
Sbjct: 288 CRRNPWAARSGSSCTPVASKDNLKVWRIMLF 380
Score = 60.2 bits (125), Expect(3) = 2e-026
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / -1
Query: 469 EEKGPPHIQIIFRCCWGT*TP*PYGPWIPXXXXXXXXXXXXRSCHA 332
E+ PP++QIIFRC WGT* P*P GPWIP RSC A
Sbjct: 380 EKHDPPNLQIIFRCYWGT*RP*PCGPWIPAAGWT*TWRGRRRSCRA 243
Score = 54.2 bits (112), Expect(3) = 2e-026
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3 / -1
Query: 220 CSPPRSAPAT*SRTGSTWTACIQ 152
CSPPRSAPAT SRTGSTWT+CI+
Sbjct: 131 CSPPRSAPATWSRTGSTWTSCIR 63
Score = 43.7 bits (89), Expect(3) = 2e-026
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = -1 / -2
Query: 576 *HQNSENFKWFSDRQXXXXXXXXXXXXTRTAEDKI*KKRVL 454
*HQN ENFK FS+RQ TRTA DKI*KK ++
Sbjct: 490 *HQNLENFKGFSNRQLNLLTLNLNTTLTRTALDKI*KKSMI 368
Score = 34.1 bits (68), Expect(3) = 9e-067
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 522 AG*AVYLRTI*SSLSFGV 575
AG*AVYLRT+*SS SFGV
Sbjct: 436 AG*AVYLRTL*SSPSFGV 489
>gb|AW747615.1|AW747615 WS1_74_B12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 560
Score = 272 bits (588), Expect(3) = 2e-091
Identities = 113/117 (96%), Positives = 114/117 (97%)
Frame = +1 / +3
Query: 109 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS 288
RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS
Sbjct: 3 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS 182
Query: 289 SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R*SECVED 459
SGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R* E +ED
Sbjct: 183 SGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R*FEGLED 353
Score = 237 bits (513), Expect(3) = 4e-083
Identities = 103/121 (85%), Positives = 106/121 (87%)
Frame = -2 / -2
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 364 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 185
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICT+DVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 184 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTNDVVSYWFDLDLLYPRTVPRT*SLTRCPV 5
Query: 110 R 108
R
Sbjct: 4 R 2
Score = 175 bits (376), Expect(4) = 1e-065
Identities = 70/76 (92%), Positives = 72/76 (94%)
Frame = +3 / +2
Query: 108 AHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQE 287
AHGAAREALRPGHRP IQ VQVEPVRD+V GADRGGEHQGGRRVVLR+ADGLHLQGQDQE
Sbjct: 2 AHGAAREALRPGHRPRIQEVQVEPVRDHVVGADRGGEHQGGRRVVLRQADGLHLQGQDQE 181
Query: 288 QRHPLPLHLGQGRPPA 335
QRHPLPLHLGQG PPA
Sbjct: 182 QRHPLPLHLGQGHPPA 229
Score = 113 bits (242), Expect(4) = 1e-066
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -1 / -1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRA 109
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDV+PHALPRA
Sbjct: 152 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVKPHALPRA 3
Score = 91.3 bits (193), Expect(4) = 1e-066
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -1 / -1
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSL+A GVHE+PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 362 KSMILQTFKLSLNATGVHENPDLAAHGFRRQVGPELGADDAGVAVR 225
Score = 84.5 bits (178), Expect(3) = 4e-083
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -2 / -2
Query: 602 LHIILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
L I+ VIHNTKT RTL GS+IDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 499 LIIMFQVIHNTKTWRTLKGSKIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 347
Score = 83.1 bits (175), Expect(4) = 1e-066
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -3
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 486 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 349
Score = 82.2 bits (173), Expect(3) = 2e-091
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = +1 / +3
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI EPFKVL VLVL IT +II
Sbjct: 360 FLLDFI*SCPCKGCVQVES*QVELSILEPFKVLQVLVL*IT*NII 494
Score = 64.8 bits (135), Expect(4) = 1e-065
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2 / +1
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP A KDNL VWR + F
Sbjct: 271 CRRNPWAARSGFSCTPVAFKDNLKVWRIMLF 363
Score = 58.8 bits (122), Expect(3) = 5e-027
Identities = 24/46 (52%), Positives = 28/46 (60%)
Frame = -3 / -3
Query: 469 EEKGPPHIQIIFRCCWGT*TP*PYGPWIPXXXXXXXXXXXXRSCHA 332
E+ PP++QIIF+C WGT* P*P GPWIP RSC A
Sbjct: 363 EKHDPPNLQIIFKCYWGT*KP*PCGPWIPAAGWT*TWRGRRRSCRA 226
Score = 52.4 bits (108), Expect(3) = 5e-027
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -3 / -3
Query: 220 CSPPRSAPAT*SRTGSTWTACIQ 152
CSPPRSAP T SRTGSTWT+CI+
Sbjct: 114 CSPPRSAPTTWSRTGSTWTSCIR 46
Score = 48.7 bits (100), Expect(3) = 5e-027
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -1 / -1
Query: 594 NTSSDP*HQNSENFKWFSDRQXXXXXXXXXXXXTRTAEDKI*KKRVL 454
N SSD *HQN ENFK F +RQ TRTA DKI*KK ++
Sbjct: 491 NVSSDS*HQNLENFKGF*NRQLNLLTLNLNTTLTRTALDKI*KKSMI 351
Score = 46.0 bits (94), Expect(4) = 1e-065
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 522 AG*AVYLRTI*SSLSFGVMDHWKYYMK 602
AG*AVY RT+*SS SFGVM+H K+Y K
Sbjct: 419 AG*AVYFRTL*SSPSFGVMNHLKHYYK 499
Score = 26.7 bits (52), Expect(3) = 4e-083
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 653 LKSHHTKVWQTN 618
L HHTK+WQ N
Sbjct: 554 LTHHHTKIWQIN 519
Score = 23.5 bits (45), Expect(4) = 1e-066
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 652 *RVIIQKYGK 623
*R+IIQKYGK
Sbjct: 553 *RIIIQKYGK 524
Score = 22.6 bits (43), Expect(4) = 1e-065
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 623 FAILLYDDSLI 655
FAI LYDD+L+
Sbjct: 524 FAIFLYDDALM 556
Score = 22.6 bits (43), Expect(3) = 2e-091
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 624 LPYFCMM 644
LPYFCMM
Sbjct: 525 LPYFCMM 545
>gb|CN127984.1|CN127984 RHOH1_26_F11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_26_F11_A002 3', mRNA sequence
Length = 820
Score = 272 bits (588), Expect(2) = 4e-091
Identities = 113/117 (96%), Positives = 114/117 (97%)
Frame = +1 / +3
Query: 109 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS 288
RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS
Sbjct: 312 RTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKS 491
Query: 289 SGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R*SECVED 459
SGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R* E +ED
Sbjct: 492 SGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI*R*FEGLED 662
Score = 239 bits (516), Expect(2) = 1e-081
Identities = 104/121 (85%), Positives = 106/121 (87%)
Frame = -2 / -1
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 673 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 494
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICTSDVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 493 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWFDLDLLYPRTVPRT*SLTRCPV 314
Query: 110 R 108
R
Sbjct: 313 R 311
Score = 175 bits (376), Expect(3) = 3e-065
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = +3 / +2
Query: 111 HGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQ 290
HGAAREALRPGHRP IQ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQ
Sbjct: 314 HGAAREALRPGHRPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQ 493
Query: 291 RHPLPLHLGQGRPPA 335
RHPLPLHLGQG PPA
Sbjct: 494 RHPLPLHLGQGHPPA 538
Score = 115 bits (246), Expect(3) = 6e-066
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRA 109
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHALPRA
Sbjct: 461 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALPRA 312
Score = 92.7 bits (196), Expect(3) = 6e-066
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1 / -3
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 671 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADDAGVAVR 534
Score = 85.8 bits (181), Expect(2) = 1e-081
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2 / -1
Query: 596 IILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
I+ VIHNTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 802 IMFQVIHNTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 656
Score = 84.5 bits (178), Expect(2) = 4e-091
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1 / +3
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL IT +II
Sbjct: 669 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL*IT*NII 803
Score = 83.1 bits (175), Expect(3) = 6e-066
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -2
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 795 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 658
Score = 68.0 bits (142), Expect(3) = 3e-065
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP ASKDNL VWR + F
Sbjct: 580 CRRNPWAARSGSSCTPVASKDNLKVWRIMLF 672
Score = 60.2 bits (125), Expect(3) = 5e-029
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -3 / -2
Query: 469 EEKGPPHIQIIFRCCWGT*TP*PYGPWIPXXXXXXXXXXXXRSCHA 332
E+ PP++QIIFRC WGT* P*P GPWIP RSC A
Sbjct: 672 EKHDPPNLQIIFRCYWGT*RP*PCGPWIPAAGWT*TWRGRRRSCRA 535
Score = 54.2 bits (112), Expect(3) = 5e-029
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -3 / -2
Query: 220 CSPPRSAPAT*SRTGSTWTACIQ 152
CSPPRSAPAT SRTGSTWT+CI+
Sbjct: 423 CSPPRSAPATWSRTGSTWTSCIR 355
Score = 52.4 bits (108), Expect(3) = 5e-029
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = -1 / -3
Query: 594 NTSSDP*HQNSENFKWFSDRQXXXXXXXXXXXXTRTAEDKI*KKRVL 454
N SSD *HQN ENFK FS+RQ TRTA DKI*KK ++
Sbjct: 800 NVSSDS*HQNLENFKGFSNRQLNLLTLNLNTTLTRTALDKI*KKSMI 660
Score = 46.0 bits (94), Expect(3) = 3e-065
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +3 / +2
Query: 522 AG*AVYLRTI*SSLSFGVMDHWKYY 596
AG*AVYLRT+*SS SFGVM+H K+Y
Sbjct: 728 AG*AVYLRTL*SSPSFGVMNHLKHY 802
>gb|AW746591.1|AW746591 WS1_54_C07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 533
Score = 289 bits (626), Expect(3) = 1e-089
Identities = 122/130 (93%), Positives = 123/130 (94%)
Frame = +1 / +3
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 249
S GRS EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG
Sbjct: 36 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 215
Query: 250 KRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 429
KRMAYIYKAKTKSSGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS
Sbjct: 216 KRMAYIYKAKTKSSGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 395
Query: 430 I*R*SECVED 459
I*R* E +ED
Sbjct: 396 I*R*FEGLED 425
Score = 255 bits (551), Expect(3) = 2e-078
Identities = 112/132 (84%), Positives = 114/132 (86%)
Frame = -2 / -2
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 436 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 257
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICTSDVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 256 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWFDLDLLYPRTVPRT*SLTRCPV 77
Query: 110 RPFTISTLQLLP 75
RPFTIS LLP
Sbjct: 76 RPFTISPPLLLP 41
Score = 196 bits (422), Expect(3) = 1e-065
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +3 / +2
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREAD 257
QK +RRDGEGAHGAAREALRPGHRP IQ VQVEPVRD+VAGADRGGEHQGGRRVVLR+AD
Sbjct: 44 QKQRRRDGEGAHGAAREALRPGHRPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVLRQAD 223
Query: 258 GLHLQGQDQEQRHPLPLHLGQGRPPA 335
GLHLQGQDQEQRHPLPLHLGQG PPA
Sbjct: 224 GLHLQGQDQEQRHPLPLHLGQGHPPA 301
Score = 138 bits (295), Expect(4) = 2e-064
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -1 / -1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHALPRAPLHHL AAAS
Sbjct: 224 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALPRAPLHHLAAAAS 45
Query: 78 A 76
A
Sbjct: 44 A 42
Score = 92.7 bits (196), Expect(4) = 2e-064
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1 / -1
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 434 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADDAGVAVR 297
Score = 68.0 bits (142), Expect(3) = 1e-065
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP ASKDNL VWR + F
Sbjct: 343 CRRNPWAARSGSSCTPVASKDNLKVWRIMLF 435
Score = 47.8 bits (98), Expect(3) = 1e-089
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +1 / +1
Query: 496 KGCVQVES*QVELSI*EPFKVL 561
+GCVQVES*QVELSI*EPFKVL
Sbjct: 466 RGCVQVES*QVELSI*EPFKVL 531
Score = 47.3 bits (97), Expect(3) = 2e-078
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -2 / -1
Query: 560 RTLNGSQIDSSTC*LST*TQPL 495
RTL GSQIDSSTC*LST*TQPL
Sbjct: 530 RTLKGSQIDSSTC*LST*TQPL 465
Score = 45.5 bits (93), Expect(4) = 2e-064
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -3 / -2
Query: 559 EL*MVLR*TAQPANSQPEHNP 497
EL* VL+*TAQPANSQPEHNP
Sbjct: 529 EL*RVLK*TAQPANSQPEHNP 467
Score = 33.1 bits (66), Expect(3) = 1e-089
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 463 FLLDFIFSCPCKG 501
FLLDFI SCPCKG
Sbjct: 432 FLLDFI*SCPCKG 470
Score = 30.4 bits (60), Expect(3) = 2e-078
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 499 PYKDS*R*NLEEKGPP 452
PYKDS R*NLEEK P
Sbjct: 468 PYKDSFR*NLEEKHDP 421
Score = 28.6 bits (56), Expect(4) = 2e-064
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -2
Query: 500 PLQGQLKIKSRRKGSST 450
PLQGQL IKSRRK S+
Sbjct: 469 PLQGQL*IKSRRKA*SS 419
Score = 26.3 bits (51), Expect(3) = 1e-065
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3 / +3
Query: 522 AG*AVYLRTI*SS 560
AG*AVYLRT+*SS
Sbjct: 492 AG*AVYLRTL*SS 530
>gb|AW925004.1|AW925004 WS1_74_B12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 486
Score = 289 bits (626), Expect(2) = 2e-083
Identities = 122/130 (93%), Positives = 123/130 (94%)
Frame = +1 / +2
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 249
S GRS EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG
Sbjct: 41 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 220
Query: 250 KRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 429
KRMAYIYKAKTKSSGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS
Sbjct: 221 KRMAYIYKAKTKSSGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 400
Query: 430 I*R*SECVED 459
I*R* E +ED
Sbjct: 401 I*R*FEGLED 430
Score = 255 bits (551), Expect(2) = 2e-073
Identities = 112/132 (84%), Positives = 114/132 (86%)
Frame = -2 / -1
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 441 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 262
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICTSDVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 261 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWFDLDLLYPRTVPRT*SLTRCPV 82
Query: 110 RPFTISTLQLLP 75
RPFTIS LLP
Sbjct: 81 RPFTISPPLLLP 46
Score = 196 bits (422), Expect(2) = 2e-063
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +3 / +1
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREAD 257
QK +RRDGEGAHGAAREALRPGHRP IQ VQVEPVRD+VAGADRGGEHQGGRRVVLR+AD
Sbjct: 49 QKQRRRDGEGAHGAAREALRPGHRPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVLRQAD 228
Query: 258 GLHLQGQDQEQRHPLPLHLGQGRPPA 335
GLHLQGQDQEQRHPLPLHLGQG PPA
Sbjct: 229 GLHLQGQDQEQRHPLPLHLGQGHPPA 306
Score = 138 bits (295), Expect(3) = 1e-058
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHALPRAPLHHL AAAS
Sbjct: 229 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALPRAPLHHLAAAAS 50
Query: 78 A 76
A
Sbjct: 49 A 47
Score = 92.7 bits (196), Expect(3) = 1e-058
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1 / -3
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 439 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADDAGVAVR 302
Score = 68.0 bits (142), Expect(2) = 2e-063
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP ASKDNL VWR + F
Sbjct: 348 CRRNPWAARSGSSCTPVASKDNLKVWRIMLF 440
Score = 42.3 bits (86), Expect(2) = 2e-073
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 511 PEHNPYKDS*R*NLEEKGPP 452
PEHNPYKDS R*NLEEK P
Sbjct: 485 PEHNPYKDSFR*NLEEKHDP 426
Score = 41.4 bits (84), Expect(2) = 2e-083
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1 / +2
Query: 463 FLLDFIFSCPCKGCVQ 510
FLLDFI SCPCKGCVQ
Sbjct: 437 FLLDFI*SCPCKGCVQ 484
Score = 35.9 bits (72), Expect(3) = 1e-058
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -1
Query: 512 T*TQPLQGQLKIKSRRKGSST 450
T*TQPLQGQL IKSRRK S+
Sbjct: 486 T*TQPLQGQL*IKSRRKA*SS 424
>gb|BG241024.1|BG241024 OV1_37_C05.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 472
Score = 289 bits (626), Expect(2) = 2e-079
Identities = 122/130 (93%), Positives = 123/130 (94%)
Frame = +1 / +2
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 249
S GRS EMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG
Sbjct: 44 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCG 223
Query: 250 KRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 429
KRMAYIYKAKTKSSGTHYRCIWGKV RPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS
Sbjct: 224 KRMAYIYKAKTKSSGTHYRCIWGKVTRPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSS 403
Query: 430 I*R*SECVED 459
I*R* E +ED
Sbjct: 404 I*R*FEGLED 433
Score = 255 bits (551), Expect(2) = 6e-068
Identities = 112/132 (84%), Positives = 114/132 (86%)
Frame = -2 / -2
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVP 291
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP
Sbjct: 444 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVP 265
Query: 290 XXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPV 111
*M*AIR PQYHATSSLVFTPSICTSDVVSYWFDLD LYPRTVPRT*SLTRCPV
Sbjct: 264 LLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWFDLDLLYPRTVPRT*SLTRCPV 85
Query: 110 RPFTISTLQLLP 75
RPFTIS LLP
Sbjct: 84 RPFTISPPLLLP 49
Score = 196 bits (422), Expect(2) = 2e-063
Identities = 79/86 (91%), Positives = 82/86 (95%)
Frame = +3 / +1
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREAD 257
QK +RRDGEGAHGAAREALRPGHRP IQ VQVEPVRD+VAGADRGGEHQGGRRVVLR+AD
Sbjct: 52 QKQRRRDGEGAHGAAREALRPGHRPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVLRQAD 231
Query: 258 GLHLQGQDQEQRHPLPLHLGQGRPPA 335
GLHLQGQDQEQRHPLPLHLGQG PPA
Sbjct: 232 GLHLQGQDQEQRHPLPLHLGQGHPPA 309
Score = 138 bits (295), Expect(3) = 7e-055
Identities = 57/61 (93%), Positives = 58/61 (95%)
Frame = -1 / -1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHALPRAPLHHL AAAS
Sbjct: 232 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALPRAPLHHLAAAAS 53
Query: 78 A 76
A
Sbjct: 52 A 50
Score = 92.7 bits (196), Expect(3) = 7e-055
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = -1 / -1
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADDAGVA+R
Sbjct: 442 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADDAGVAVR 305
Score = 68.0 bits (142), Expect(2) = 2e-063
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2 / +3
Query: 377 CRRNPWAVRSGCSCTPAASKDNLNVWRTLFF 469
CRRNPWA RSG SCTP ASKDNL VWR + F
Sbjct: 351 CRRNPWAARSGSSCTPVASKDNLKVWRIMLF 443
Score = 28.1 bits (55), Expect(2) = 2e-079
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 463 FLLDFIFSCPC 495
FLLDFI SCPC
Sbjct: 440 FLLDFI*SCPC 472
Score = 24.0 bits (46), Expect(2) = 6e-068
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -3
Query: 493 KDS*R*NLEEKGPP 452
KDS R*NLEEK P
Sbjct: 470 KDSFR*NLEEKHDP 429
Score = 23.5 bits (45), Expect(3) = 7e-055
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 494 QGQLKIKSRRKGSST 450
QGQL IKSRRK S+
Sbjct: 471 QGQL*IKSRRKA*SS 427
>gb|AI724008.1|AI724008 RHIZ1_27_C05.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 531
Score = 259 bits (561), Expect = 2e-068
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / +3
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 12 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 191
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 192 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 350
Score = 215 bits (464), Expect = 6e-055
Identities = 94/113 (83%), Positives = 96/113 (84%)
Frame = -2 / -3
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 349 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 170
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLVFTPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 169 RLPAYHATSSLVFTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 11
Score = 158 bits (340), Expect(2) = 2e-042
Identities = 64/79 (81%), Positives = 68/79 (86%)
Frame = +3 / +2
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HG AREALRPGH P IQ VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQ
Sbjct: 14 GEGTHGTAREALRPGHHPRIQEVQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQ 193
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQR PL +HLGQG PPA
Sbjct: 194 DQEQRDPLQVHLGQGHPPA 250
Score = 115 bits (246), Expect(2) = 3e-038
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L +VPRDVLLGVHPLDLHQRR LVLVRLGPLVS+DGAPDVEPHAL RA LHH
Sbjct: 173 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGPLVSEDGAPDVEPHALSRASLHH 12
Score = 64.3 bits (134), Expect(2) = 3e-038
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = -1 / -2
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+VG ELGADDAGV +R
Sbjct: 353 TLDAARVHEHSDLAPHGLRREVGLELGADDAGVTVR 246
Score = 35.4 bits (71), Expect(2) = 2e-042
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 295 RLSPWGARSECSCTRAASK 351
>gb|BE918059.1|BE918059 OV1_1_D08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 569
Score = 259 bits (561), Expect = 2e-068
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 16 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 195
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 196 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 354
Score = 210 bits (454), Expect = 1e-053
Identities = 92/113 (81%), Positives = 94/113 (83%)
Frame = -2 / -1
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 353 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 174
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLV TPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 173 RLPAYHATSSLVLTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 15
Score = 149 bits (320), Expect(2) = 1e-039
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +3 / +3
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HGAAR+ALRPGH P IQ VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQ
Sbjct: 18 GEGTHGAARQALRPGHHPRIQEVQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQ 197
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQ PL +HLG G PPA
Sbjct: 198 DQEQ*DPLQVHLG*GHPPA 254
Score = 109 bits (232), Expect(2) = 3e-035
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L VPRDVLLGV PLDLH+RR LVLVRLGPLVS+DGAPDVEP ALPRA LHH
Sbjct: 177 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGPLVSEDGAPDVEPDALPRASLHH 16
Score = 60.6 bits (126), Expect(2) = 3e-035
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -1 / -3
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+V ELGADD GVA+R
Sbjct: 357 TLDAARVHEHSDLAPHGLRREVRLELGADDTGVAVR 250
Score = 35.0 bits (70), Expect(2) = 1e-039
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 299 RLSPWGARSECSCTLAASK 355
>gb|BE918279.1|BE918279 OV1_1_D08.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 519
Score = 259 bits (561), Expect = 2e-068
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 16 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 195
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 196 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 354
Score = 210 bits (454), Expect = 1e-053
Identities = 92/113 (81%), Positives = 94/113 (83%)
Frame = -2 / -2
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 353 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 174
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLV TPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 173 RLPAYHATSSLVLTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 15
Score = 149 bits (320), Expect(2) = 1e-039
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +3 / +3
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HGAAR+ALRPGH P IQ VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQ
Sbjct: 18 GEGTHGAARQALRPGHHPRIQEVQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQ 197
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQ PL +HLG G PPA
Sbjct: 198 DQEQ*DPLQVHLG*GHPPA 254
Score = 109 bits (232), Expect(2) = 3e-035
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L VPRDVLLGV PLDLH+RR LVLVRLGPLVS+DGAPDVEP ALPRA LHH
Sbjct: 177 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGPLVSEDGAPDVEPDALPRASLHH 16
Score = 60.6 bits (126), Expect(2) = 3e-035
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -1 / -1
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+V ELGADD GVA+R
Sbjct: 357 TLDAARVHEHSDLAPHGLRREVRLELGADDTGVAVR 250
Score = 35.0 bits (70), Expect(2) = 1e-039
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 299 RLSPWGARSECSCTLAASK 355
>gb|BE919049.1|BE919049 FM1_3_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 556
Score = 259 bits (561), Expect = 2e-068
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / +3
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 57 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 236
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 237 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 395
Score = 210 bits (454), Expect = 1e-053
Identities = 92/113 (81%), Positives = 94/113 (83%)
Frame = -2 / -1
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 394 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 215
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLV TPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 214 RLPAYHATSSLVLTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 56
Score = 149 bits (320), Expect(2) = 1e-039
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +3 / +2
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HGAAR+ALRPGH P IQ VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQ
Sbjct: 59 GEGTHGAARQALRPGHHPRIQEVQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQ 238
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQ PL +HLG G PPA
Sbjct: 239 DQEQ*DPLQVHLG*GHPPA 295
Score = 109 bits (232), Expect(2) = 3e-035
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L VPRDVLLGV PLDLH+RR LVLVRLGPLVS+DGAPDVEP ALPRA LHH
Sbjct: 218 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGPLVSEDGAPDVEPDALPRASLHH 57
Score = 60.6 bits (126), Expect(2) = 3e-035
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -1 / -3
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+V ELGADD GVA+R
Sbjct: 398 TLDAARVHEHSDLAPHGLRREVRLELGADDTGVAVR 291
Score = 35.0 bits (70), Expect(2) = 1e-039
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 340 RLSPWGARSECSCTLAASK 396
>gb|BE919123.1|BE919123 FM1_3_D09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 517
Score = 259 bits (561), Expect = 2e-068
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / +3
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 57 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 236
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 237 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 395
Score = 210 bits (454), Expect = 1e-053
Identities = 92/113 (81%), Positives = 94/113 (83%)
Frame = -2 / -1
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 394 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 215
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLV TPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 214 RLPAYHATSSLVLTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 56
Score = 149 bits (320), Expect(2) = 1e-039
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +3 / +2
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HGAAR+ALRPGH P IQ VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQ
Sbjct: 59 GEGTHGAARQALRPGHHPRIQEVQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQ 238
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQ PL +HLG G PPA
Sbjct: 239 DQEQ*DPLQVHLG*GHPPA 295
Score = 109 bits (232), Expect(2) = 3e-035
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L VPRDVLLGV PLDLH+RR LVLVRLGPLVS+DGAPDVEP ALPRA LHH
Sbjct: 218 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGPLVSEDGAPDVEPDALPRASLHH 57
Score = 60.6 bits (126), Expect(2) = 3e-035
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -1 / -3
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+V ELGADD GVA+R
Sbjct: 398 TLDAARVHEHSDLAPHGLRREVRLELGADDTGVAVR 291
Score = 35.0 bits (70), Expect(2) = 1e-039
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 340 RLSPWGARSECSCTLAASK 396
>gb|BG240885.1|BG240885 OV1_39_E03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 529
Score = 259 bits (561), Expect = 2e-068
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / +1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 7 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 186
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 187 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 345
Score = 210 bits (454), Expect = 1e-053
Identities = 92/113 (81%), Positives = 94/113 (83%)
Frame = -2 / -3
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 344 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 165
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLV TPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 164 RLPAYHATSSLVLTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 6
Score = 149 bits (320), Expect(2) = 1e-039
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +3 / +3
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HGAAR+ALRPGH P IQ VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQ
Sbjct: 9 GEGTHGAARQALRPGHHPRIQEVQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQ 188
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQ PL +HLG G PPA
Sbjct: 189 DQEQ*DPLQVHLG*GHPPA 245
Score = 109 bits (232), Expect(2) = 3e-035
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L VPRDVLLGV PLDLH+RR LVLVRLGPLVS+DGAPDVEP ALPRA LHH
Sbjct: 168 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGPLVSEDGAPDVEPDALPRASLHH 7
Score = 60.6 bits (126), Expect(2) = 3e-035
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -1 / -2
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+V ELGADD GVA+R
Sbjct: 348 TLDAARVHEHSDLAPHGLRREVRLELGADDTGVAVR 241
Score = 35.0 bits (70), Expect(2) = 1e-039
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 290 RLSPWGARSECSCTLAASK 346
>gb|BG241207.1|BG241207 OV1_39_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 456
Score = 258 bits (557), Expect = 9e-068
Identities = 106/113 (93%), Positives = 108/113 (95%)
Frame = +1 / +3
Query: 97 MVKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKA 276
MVKGRTGQRVRLYVRGT+LGYKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKA
Sbjct: 57 MVKGRTGQRVRLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKA 236
Query: 277 KTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYP SI*
Sbjct: 237 KTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPXSI* 395
Score = 208 bits (449), Expect = 7e-053
Identities = 91/113 (80%), Positives = 93/113 (82%)
Frame = -2 / -3
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*ML GYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 394 *MLXGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 215
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTI 96
R P YHATSSLV TPSICTSDVVSYWFDLD LYPR VPRT*SLTRCPVRPFT+
Sbjct: 214 RLPAYHATSSLVLTPSICTSDVVSYWFDLDLLYPRMVPRT*SLTRCPVRPFTM 56
Score = 149 bits (320), Expect(2) = 5e-039
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +3 / +2
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQ 278
GEG HGAAR+ALRPGH P IQ VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQ
Sbjct: 59 GEGTHGAARQALRPGHHPRIQEVQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQ 238
Query: 279 DQEQRHPLPLHLGQGRPPA 335
DQEQ PL +HLG G PPA
Sbjct: 239 DQEQ*DPLQVHLG*GHPPA 295
Score = 109 bits (232), Expect(2) = 1e-034
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLHH 97
H L VPRDVLLGV PLDLH+RR LVLVRLGPLVS+DGAPDVEP ALPRA LHH
Sbjct: 218 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGPLVSEDGAPDVEPDALPRASLHH 57
Score = 58.8 bits (122), Expect(2) = 1e-034
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = -1 / -2
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDA VHEH DL HG RR+V ELGADD GVA+R
Sbjct: 398 TLDAXRVHEHSDLAPHGLRREVRLELGADDTGVAVR 291
Score = 33.1 bits (66), Expect(2) = 5e-039
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2 / +1
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT ASK
Sbjct: 340 RLSPWGARSECSCTLXASK 396
>gb|CW360969.1|CW360969 fsbb001f029e21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029e21, DNA
sequence
Length = 673
Score = 191 bits (411), Expect(3) = 3e-067
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = +1 / -2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGN
Sbjct: 468 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGN 289
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKFRSNLPPESM
Sbjct: 288 SGVVRAKFRSNLPPESM 238
Score = 163 bits (351), Expect(2) = 5e-045
Identities = 72/92 (78%), Positives = 72/92 (78%)
Frame = -2 / +2
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFT
Sbjct: 239 MDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFT 418
Query: 212 PSICTSDVVSYWFDLDRLYPRTVPRT*SLTRC 117
PSICTSDVVSYWFDLD PR P S C
Sbjct: 419 PSICTSDVVSYWFDLDLHQPRPPPARASQHGC 514
Score = 142 bits (305), Expect(4) = 3e-052
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3 / -1
Query: 153 WIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPP 332
W+ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PP
Sbjct: 478 WLMQVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPP 299
Query: 333 A 335
A
Sbjct: 298 A 296
Score = 74.4 bits (156), Expect(4) = 9e-043
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / +1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 373 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGP 468
Score = 71.2 bits (149), Expect(4) = 9e-043
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -1 / +2
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAASA 76
R PLVS+DGAPDVEPHALPRAPLHHL AAASA
Sbjct: 551 RSSPLVSEDGAPDVEPHALPRAPLHHLAAAASA 649
Score = 64.8 bits (135), Expect(3) = 3e-067
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1 / -1
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
S GRS EMVKGRTGQRVRLYVRGTVLGYKR
Sbjct: 655 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKR 560
Score = 63.8 bits (133), Expect(4) = 3e-052
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAV 167
QK +RRDGEGAHGAAREALRPGHRP IQ V
Sbjct: 647 QKQRRRDGEGAHGAAREALRPGHRPRIQEV 558
Score = 51.9 bits (107), Expect(4) = 9e-043
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +1
Query: 393 HGFRRQVGPELGADDAGVAMR 331
HGFRRQVGPELGADDAGVA+R
Sbjct: 238 HGFRRQVGPELGADDAGVAVR 300
Score = 40.0 bits (81), Expect(3) = 3e-067
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1 / -2
Query: 379 PPESMGRKVRVFMYPSSI*R 438
PP GRKVRVFMYPSSI*R
Sbjct: 153 PPLLQGRKVRVFMYPSSI*R 94
Score = 39.1 bits (79), Expect(2) = 5e-045
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 437 L*MLLGYMNTLTLRPMDSGGR 375
L*MLLGYM TLTLRP + GG+
Sbjct: 95 L*MLLGYMKTLTLRPCNKGGQ 157
Score = 34.1 bits (68), Expect(4) = 3e-052
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / -1
Query: 387 IHGP*GQGVHVPQQHLKI 440
+ GP GQG+HVPQ HLK+
Sbjct: 145 VAGPQGQGLHVPQ*HLKV 92
Score = 33.6 bits (67), Expect(4) = 9e-043
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 442 IIFRCCWGT*TP*PYGP 392
+ FRC WGT* P*P GP
Sbjct: 90 LTFRCYWGT*RP*PCGP 140
Score = 22.6 bits (43), Expect(4) = 3e-052
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / -3
Query: 377 CRRNPW 394
CRRNPW
Sbjct: 254 CRRNPW 237
>gb|CW408197.1|CW408197 fsbb001f101p17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101p17, DNA
sequence
Length = 584
Score = 191 bits (411), Expect(3) = 6e-063
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = +1 / -2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGN
Sbjct: 355 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGN 176
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKFRSNLPPESM
Sbjct: 175 SGVVRAKFRSNLPPESM 125
Score = 163 bits (351), Expect(2) = 8e-041
Identities = 72/92 (78%), Positives = 72/92 (78%)
Frame = -2 / +3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFT
Sbjct: 126 MDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFT 305
Query: 212 PSICTSDVVSYWFDLDRLYPRTVPRT*SLTRC 117
PSICTSDVVSYWFDLD PR P S C
Sbjct: 306 PSICTSDVVSYWFDLDLHQPRPPPARASQHGC 401
Score = 142 bits (305), Expect(3) = 2e-047
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3 / -1
Query: 153 WIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPP 332
W+ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PP
Sbjct: 365 WLMQVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPP 186
Query: 333 A 335
A
Sbjct: 185 A 183
Score = 74.4 bits (156), Expect(3) = 5e-038
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / +2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 260 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGP 355
Score = 71.2 bits (149), Expect(3) = 5e-038
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -1 / +3
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAASA 76
R PLVS+DGAPDVEPHALPRAPLHHL AAASA
Sbjct: 438 RSSPLVSEDGAPDVEPHALPRAPLHHLAAAASA 536
Score = 64.8 bits (135), Expect(3) = 6e-063
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1 / -1
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
S GRS EMVKGRTGQRVRLYVRGTVLGYKR
Sbjct: 542 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKR 447
Score = 63.8 bits (133), Expect(3) = 2e-047
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAV 167
QK +RRDGEGAHGAAREALRPGHRP IQ V
Sbjct: 534 QKQRRRDGEGAHGAAREALRPGHRPRIQEV 445
Score = 51.9 bits (107), Expect(3) = 5e-038
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +2
Query: 393 HGFRRQVGPELGADDAGVAMR 331
HGFRRQVGPELGADDAGVA+R
Sbjct: 125 HGFRRQVGPELGADDAGVAVR 187
Score = 25.4 bits (49), Expect(3) = 6e-063
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 379 PPESMGRKVRVFM 417
PP GRKVRVFM
Sbjct: 40 PPLLQGRKVRVFM 2
Score = 24.9 bits (48), Expect(2) = 8e-041
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 416 MNTLTLRPMDSGGR 375
M TLTLRP + GG+
Sbjct: 3 MKTLTLRPCNKGGQ 44
Score = 22.6 bits (43), Expect(3) = 2e-047
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / -3
Query: 377 CRRNPW 394
CRRNPW
Sbjct: 141 CRRNPW 124
>gb|CW277987.1|CW277987 104_752_11406317_116_35679_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11406317, DNA
sequence
Length = 652
Score = 191 bits (411), Expect(2) = 6e-061
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = +1 / +2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGN
Sbjct: 326 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGN 505
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKFRSNLPPESM
Sbjct: 506 SGVVRAKFRSNLPPESM 556
Score = 163 bits (351), Expect = 2e-039
Identities = 72/92 (78%), Positives = 72/92 (78%)
Frame = -2 / -2
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFT
Sbjct: 555 MDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFT 376
Query: 212 PSICTSDVVSYWFDLDRLYPRTVPRT*SLTRC 117
PSICTSDVVSYWFDLD PR P S C
Sbjct: 375 PSICTSDVVSYWFDLDLHQPRPPPARASQHGC 280
Score = 142 bits (305), Expect(3) = 2e-047
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3 / +1
Query: 153 WIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPP 332
W+ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PP
Sbjct: 316 WLMQVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPP 495
Query: 333 A 335
A
Sbjct: 496 A 498
Score = 74.4 bits (156), Expect(3) = 5e-038
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / -1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 421 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGP 326
Score = 71.2 bits (149), Expect(3) = 5e-038
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -1 / -2
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAASA 76
R PLVS+DGAPDVEPHALPRAPLHHL AAASA
Sbjct: 243 RSSPLVSEDGAPDVEPHALPRAPLHHLAAAASA 145
Score = 64.8 bits (135), Expect(2) = 6e-061
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1 / +1
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
S GRS EMVKGRTGQRVRLYVRGTVLGYKR
Sbjct: 139 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKR 234
Score = 63.8 bits (133), Expect(3) = 2e-047
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3 / +3
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAV 167
QK +RRDGEGAHGAAREALRPGHRP IQ V
Sbjct: 147 QKQRRRDGEGAHGAAREALRPGHRPRIQEV 236
Score = 51.9 bits (107), Expect(3) = 5e-038
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / -1
Query: 393 HGFRRQVGPELGADDAGVAMR 331
HGFRRQVGPELGADDAGVA+R
Sbjct: 556 HGFRRQVGPELGADDAGVAVR 494
Score = 22.6 bits (43), Expect(3) = 2e-047
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / +3
Query: 377 CRRNPW 394
CRRNPW
Sbjct: 540 CRRNPW 557
>gb|CF756028.1|CF756028 DSAF1_3_C04.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_3_C04_A011 5', mRNA sequence
Length = 530
Score = 234 bits (505), Expect = 1e-060
Identities = 95/112 (84%), Positives = 103/112 (91%)
Frame = +1 / +1
Query: 100 VKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK 279
VKGR GQRVR YVRGT+LGYKRSKSNQYE TSL+QIEGV+TKEDVAWY GKR+AY+YKAK
Sbjct: 1 VKGRQGQRVRTYVRGTILGYKRSKSNQYEHTSLLQIEGVSTKEDVAWYGGKRIAYVYKAK 180
Query: 280 TKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
TKS GT RCIWGKV RPHGNSGVVRAKFRS+LPP SMG+KVRVFMYPSS+*
Sbjct: 181 TKSDGTAVRCIWGKVTRPHGNSGVVRAKFRSHLPPSSMGKKVRVFMYPSSV* 336
Score = 176 bits (379), Expect = 3e-043
Identities = 77/109 (70%), Positives = 80/109 (73%)
Frame = -2 / -1
Query: 428 LLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRF 249
LLGYMNT T PM+ GGR D NLARTTPELPCGR TLPQM R VP *AIR
Sbjct: 329 LLGYMNTRTFLPMELGGRWDRNLARTTPELPCGRVTLPQMHRTAVPSLLVLALYT*AIRL 150
Query: 248 PQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPF 102
P YHATSSLV TPSIC+SDV SYWFDL+RL PR VPRT LTR P RPF
Sbjct: 149 PPYHATSSLVLTPSICSSDVCSYWFDLERL*PRIVPRTYVLTRWPCRPF 3
Score = 119 bits (254), Expect(2) = 7e-031
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +3 / +3
Query: 102 EGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQD 281
EG G A + +R GH P +QA+QVEPVR +VA ADRG +HQGGR VV R+AD L +QGQD
Sbjct: 3 EGTAGPASQDVRAGHDPGLQALQVEPVRAHVAAADRGRQHQGGRGVVRRQADRLRVQGQD 182
Query: 282 QEQRHPLPLHLGQGRPPA 335
QE+RH P+HLGQG PA
Sbjct: 183 QERRHRRPMHLGQGHAPA 236
Score = 70.7 bits (148), Expect(2) = 8e-026
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = -1 / -3
Query: 255 PLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLH 100
PL AVPR VLLG LDL QRR LVLVRLG LV++D AP V P +L LH
Sbjct: 156 PLAAVPRHVLLGADALDLQQRRVLVLVRLGALVAQDRAPHVRPDSLALPSLH 1
Score = 67.5 bits (141), Expect(2) = 8e-026
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 444 RLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
RL D AGVHEH DL HG R+VGPELGADDAGV +R
Sbjct: 345 RLESDTAGVHEHADLLTHGAGREVGPELGADDAGVTVR 232
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASKDN 442
R PW RS CSCTPA S N
Sbjct: 281 RPAPWVRRSACSCTPAVSDSN 343
>gb|CF756106.1|CF756106 DSAF1_3_C04.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_3_C04_A011 3', mRNA sequence
Length = 533
Score = 234 bits (505), Expect = 1e-060
Identities = 95/112 (84%), Positives = 103/112 (91%)
Frame = +1 / +1
Query: 100 VKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK 279
VKGR GQRVR YVRGT+LGYKRSKSNQYE TSL+QIEGV+TKEDVAWY GKR+AY+YKAK
Sbjct: 1 VKGRQGQRVRTYVRGTILGYKRSKSNQYEHTSLLQIEGVSTKEDVAWYGGKRIAYVYKAK 180
Query: 280 TKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
TKS GT RCIWGKV RPHGNSGVVRAKFRS+LPP SMG+KVRVFMYPSS+*
Sbjct: 181 TKSDGTAVRCIWGKVTRPHGNSGVVRAKFRSHLPPSSMGKKVRVFMYPSSV* 336
Score = 176 bits (379), Expect = 3e-043
Identities = 77/109 (70%), Positives = 80/109 (73%)
Frame = -2 / -1
Query: 428 LLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRF 249
LLGYMNT T PM+ GGR D NLARTTPELPCGR TLPQM R VP *AIR
Sbjct: 329 LLGYMNTRTFLPMELGGRWDRNLARTTPELPCGRVTLPQMHRTAVPSLLVLALYT*AIRL 150
Query: 248 PQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPF 102
P YHATSSLV TPSIC+SDV SYWFDL+RL PR VPRT LTR P RPF
Sbjct: 149 PPYHATSSLVLTPSICSSDVCSYWFDLERL*PRIVPRTYVLTRWPCRPF 3
Score = 119 bits (254), Expect(2) = 7e-031
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +3 / +3
Query: 102 EGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQD 281
EG G A + +R GH P +QA+QVEPVR +VA ADRG +HQGGR VV R+AD L +QGQD
Sbjct: 3 EGTAGPASQDVRAGHDPGLQALQVEPVRAHVAAADRGRQHQGGRGVVRRQADRLRVQGQD 182
Query: 282 QEQRHPLPLHLGQGRPPA 335
QE+RH P+HLGQG PA
Sbjct: 183 QERRHRRPMHLGQGHAPA 236
Score = 70.7 bits (148), Expect(2) = 8e-026
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = -1 / -3
Query: 255 PLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLH 100
PL AVPR VLLG LDL QRR LVLVRLG LV++D AP V P +L LH
Sbjct: 156 PLAAVPRHVLLGADALDLQQRRVLVLVRLGALVAQDRAPHVRPDSLALPSLH 1
Score = 67.5 bits (141), Expect(2) = 8e-026
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 444 RLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
RL D AGVHEH DL HG R+VGPELGADDAGV +R
Sbjct: 345 RLESDTAGVHEHADLLTHGAGREVGPELGADDAGVTVR 232
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASKDN 442
R PW RS CSCTPA S N
Sbjct: 281 RPAPWVRRSACSCTPAVSDSN 343
>gb|CF758759.1|CF758759 DSAF1_36_C08.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_36_C08_A011 3', mRNA sequence
Length = 533
Score = 234 bits (505), Expect = 1e-060
Identities = 95/112 (84%), Positives = 103/112 (91%)
Frame = +1 / +1
Query: 100 VKGRTGQRVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAK 279
VKGR GQRVR YVRGT+LGYKRSKSNQYE TSL+QIEGV+TKEDVAWY GKR+AY+YKAK
Sbjct: 1 VKGRQGQRVRTYVRGTILGYKRSKSNQYEHTSLLQIEGVSTKEDVAWYGGKRIAYVYKAK 180
Query: 280 TKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
TKS GT RCIWGKV RPHGNSGVVRAKFRS+LPP SMG+KVRVFMYPSS+*
Sbjct: 181 TKSDGTAVRCIWGKVTRPHGNSGVVRAKFRSHLPPSSMGKKVRVFMYPSSV* 336
Score = 176 bits (379), Expect = 3e-043
Identities = 77/109 (70%), Positives = 80/109 (73%)
Frame = -2 / -1
Query: 428 LLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRF 249
LLGYMNT T PM+ GGR D NLARTTPELPCGR TLPQM R VP *AIR
Sbjct: 329 LLGYMNTRTFLPMELGGRWDRNLARTTPELPCGRVTLPQMHRTAVPSLLVLALYT*AIRL 150
Query: 248 PQYHATSSLVFTPSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPF 102
P YHATSSLV TPSIC+SDV SYWFDL+RL PR VPRT LTR P RPF
Sbjct: 149 PPYHATSSLVLTPSICSSDVCSYWFDLERL*PRIVPRTYVLTRWPCRPF 3
Score = 119 bits (254), Expect(2) = 7e-031
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +3 / +3
Query: 102 EGAHGAAREALRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQD 281
EG G A + +R GH P +QA+QVEPVR +VA ADRG +HQGGR VV R+AD L +QGQD
Sbjct: 3 EGTAGPASQDVRAGHDPGLQALQVEPVRAHVAAADRGRQHQGGRGVVRRQADRLRVQGQD 182
Query: 282 QEQRHPLPLHLGQGRPPA 335
QE+RH P+HLGQG PA
Sbjct: 183 QERRHRRPMHLGQGHAPA 236
Score = 70.7 bits (148), Expect(2) = 8e-026
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = -1 / -3
Query: 255 PLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEPHALPRAPLH 100
PL AVPR VLLG LDL QRR LVLVRLG LV++D AP V P +L LH
Sbjct: 156 PLAAVPRHVLLGADALDLQQRRVLVLVRLGALVAQDRAPHVRPDSLALPSLH 1
Score = 67.5 bits (141), Expect(2) = 8e-026
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -3
Query: 444 RLSLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
RL D AGVHEH DL HG R+VGPELGADDAGV +R
Sbjct: 345 RLESDTAGVHEHADLLTHGAGREVGPELGADDAGVTVR 232
Score = 35.9 bits (72), Expect(2) = 7e-031
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASKDN 442
R PW RS CSCTPA S N
Sbjct: 281 RPAPWVRRSACSCTPAVSDSN 343
>gb|CW331951.1|CW331951 104_829_11481169_116_36027_007 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481169, DNA
sequence
Length = 753
Score = 178 bits (383), Expect(3) = 2e-059
Identities = 72/77 (93%), Positives = 73/77 (94%)
Frame = +1 / -2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGN
Sbjct: 437 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGN 258
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKF+SNLPPESM
Sbjct: 257 SGVVRAKFKSNLPPESM 207
Score = 136 bits (292), Expect(3) = 9e-047
Identities = 60/76 (78%), Positives = 61/76 (80%)
Frame = -2 / +1
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLVFT
Sbjct: 208 MDSGGRLDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVFT 387
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 388 PSICTSDVVSYWFDLD 435
Score = 113 bits (241), Expect(3) = 4e-036
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3 / -1
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 435 VQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 265
Score = 69.3 bits (145), Expect(4) = 4e-032
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / +3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L +VPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 342 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGP 437
Score = 57.0 bits (118), Expect(3) = 2e-059
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1 / -1
Query: 46 VHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
V PA+ S + MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 636 VSSPAAEA*AEGSKAATMVKGRTGQRVRLYVRGTILGYKR 517
Score = 56.1 bits (116), Expect(3) = 9e-047
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1 / +1
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
R+ PLVS+DGAPDVEPHAL RA LHH AS
Sbjct: 508 RISPLVSEDGAPDVEPHALSRASLHHGGRLAS 603
Score = 52.8 bits (109), Expect(4) = 4e-032
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -2 / +2
Query: 161 LYPRTVPRT*SLTRCPVRPFTISTLQLLPLESGEAGTWT 45
LYPR VPRT*SLTRCPVRPFT+ L + AG T
Sbjct: 521 LYPRMVPRT*SLTRCPVRPFTMVAALLPSAYASAAGDET 637
Score = 51.0 bits (105), Expect(3) = 4e-036
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +3 / -3
Query: 75 GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEP 179
G+K GEG HG AREALRPGH P IQ V+ P
Sbjct: 607 GRKQGGHHGEGTHGTAREALRPGHHPRIQEVRSAP 503
Score = 44.6 bits (91), Expect(4) = 4e-032
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1 / +3
Query: 402 LTAHGFRRQVGPELGADDAGVAMR 331
+T HG RR+VG ELGADDAGVA+R
Sbjct: 198 VTDHGLRRKVGLELGADDAGVAVR 269
Score = 34.1 bits (68), Expect(3) = 2e-059
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 394 GRKVRVFMYPSSI*R*SE 447
GRKVRVFMYPSSI* * +
Sbjct: 117 GRKVRVFMYPSSI*G*ED 64
Score = 34.1 bits (68), Expect(3) = 9e-047
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +2
Query: 434 *MLLGYMNTLTLRP 393
*MLLGYMNTLTLRP
Sbjct: 77 *MLLGYMNTLTLRP 118
Score = 29.5 bits (58), Expect(3) = 4e-036
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 393 GP*GQGVHVPQQHLKI 440
G GQ VHVP+QHL++
Sbjct: 118 GAQGQSVHVPEQHLRL 71
Score = 28.1 bits (55), Expect(4) = 4e-032
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 441 LSLDAAGVHEHPDL 400
L+LDAA VHEH DL
Sbjct: 70 LTLDAARVHEHSDL 111
>gb|CW360970.1|CW360970 fsbb001f029e21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f029e21, DNA
sequence
Length = 813
Score = 184 bits (396), Expect(2) = 7e-059
Identities = 73/75 (97%), Positives = 73/75 (97%)
Frame = +1 / +2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGN
Sbjct: 587 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGN 766
Query: 343 SGVVRAKFRSNLPPE 387
GVVRAKFRSNLPPE
Sbjct: 767 FGVVRAKFRSNLPPE 811
Score = 159 bits (342), Expect = 4e-038
Identities = 70/91 (76%), Positives = 71/91 (78%)
Frame = -2 / -1
Query: 389 DSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFTP 210
DSGGRLDLNLARTTP+LPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFTP
Sbjct: 813 DSGGRLDLNLARTTPKLPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFTP 634
Query: 209 SICTSDVVSYWFDLDRLYPRTVPRT*SLTRC 117
SICTSDVVSYWFDLD PR P S C
Sbjct: 633 SICTSDVVSYWFDLDLHQPRPPPARASQHGC 541
Score = 142 bits (305), Expect(2) = 4e-046
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3 / +1
Query: 153 WIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPP 332
W+ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PP
Sbjct: 577 WLMQVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPP 756
Query: 333 A 335
A
Sbjct: 757 A 759
Score = 74.4 bits (156), Expect(3) = 4e-035
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 682 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGP 587
Score = 71.2 bits (149), Expect(3) = 4e-035
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = -1 / -1
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAASA 76
R PLVS+DGAPDVEPHALPRAPLHHL AAASA
Sbjct: 504 RSSPLVSEDGAPDVEPHALPRAPLHHLAAAASA 406
Score = 64.8 bits (135), Expect(2) = 7e-059
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1 / +1
Query: 70 SRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
S GRS EMVKGRTGQRVRLYVRGTVLGYKR
Sbjct: 400 SGGRSSGGEMVKGRTGQRVRLYVRGTVLGYKR 495
Score = 63.8 bits (133), Expect(2) = 4e-046
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3 / +3
Query: 78 QKLQRRDGEGAHGAAREALRPGHRPWIQAV 167
QK +RRDGEGAHGAAREALRPGHRP IQ V
Sbjct: 408 QKQRRRDGEGAHGAAREALRPGHRPRIQEV 497
Score = 41.8 bits (85), Expect(3) = 4e-035
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -1 / -3
Query: 387 FRRQVGPELGADDAGVAMR 331
FRRQVGPELGADDA VA+R
Sbjct: 811 FRRQVGPELGADDAEVAVR 755
>gb|CL150834.1|CL150834 104_332_10778813_114_31357_365 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778813, DNA
sequence
Length = 554
Score = 178 bits (383), Expect(3) = 1e-058
Identities = 72/77 (93%), Positives = 73/77 (94%)
Frame = +1 / -2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGN
Sbjct: 379 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGN 200
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKF+SNLPPESM
Sbjct: 199 SGVVRAKFKSNLPPESM 149
Score = 136 bits (292), Expect(3) = 3e-046
Identities = 60/76 (78%), Positives = 61/76 (80%)
Frame = -2 / +3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLVFT
Sbjct: 150 MDSGGRLDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVFT 329
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 330 PSICTSDVVSYWFDLD 377
Score = 113 bits (241), Expect(3) = 8e-037
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3 / -1
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 377 VQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 207
Score = 69.3 bits (145), Expect(4) = 9e-032
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / +2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L +VPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 284 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGP 379
Score = 54.7 bits (113), Expect(3) = 1e-058
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 82 SCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
S + MVKGRTGQRVRLYVRGT LGYKR
Sbjct: 542 SKAATMVKGRTGQRVRLYVRGTFLGYKR 459
Score = 54.2 bits (112), Expect(3) = 3e-046
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -1 / +3
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
R+ PLVS++GAPDVEPHAL RA LHH AS
Sbjct: 450 RISPLVSEEGAPDVEPHALSRATLHHGGRLAS 545
Score = 52.4 bits (108), Expect(3) = 8e-037
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3 / -3
Query: 75 GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEPV 182
G+K GEG+HG AREALRPGH P IQ V+ PV
Sbjct: 549 GRKQGGHHGEGSHGTAREALRPGHLPRIQEVRSAPV 442
Score = 51.5 bits (106), Expect(4) = 9e-032
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2 / +1
Query: 161 LYPRTVPRT*SLTRCPVRPFTI 96
LYPR VPRT*SLTRCPVRPFT+
Sbjct: 463 LYPRKVPRT*SLTRCPVRPFTM 528
Score = 44.6 bits (91), Expect(4) = 9e-032
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 402 LTAHGFRRQVGPELGADDAGVAMR 331
+T HG RR+VG ELGADDAGVA+R
Sbjct: 140 VTDHGLRRKVGLELGADDAGVAVR 211
Score = 34.1 bits (68), Expect(3) = 1e-058
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 394 GRKVRVFMYPSSI*R*SE 447
GRKVRVFMYPSSI* * +
Sbjct: 59 GRKVRVFMYPSSI*G*ED 6
Score = 34.1 bits (68), Expect(3) = 3e-046
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +1
Query: 434 *MLLGYMNTLTLRP 393
*MLLGYMNTLTLRP
Sbjct: 19 *MLLGYMNTLTLRP 60
Score = 29.5 bits (58), Expect(3) = 8e-037
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 393 GP*GQGVHVPQQHLKI 440
G GQ VHVP+QHL++
Sbjct: 60 GAQGQSVHVPEQHLRL 13
Score = 28.1 bits (55), Expect(4) = 9e-032
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 441 LSLDAAGVHEHPDL 400
L+LDAA VHEH DL
Sbjct: 12 LTLDAARVHEHSDL 53
>gb|CW130736.1|CW130736 104_513_11115281_148_34776_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115281, DNA
sequence
Length = 521
Score = 179 bits (385), Expect(2) = 9e-055
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = +1 / -3
Query: 160 KRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHG 339
+RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHG
Sbjct: 291 RRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHG 112
Query: 340 NSGVVRAKFRSNLPPESM 393
NSGVVRAKF+SNLPPESM
Sbjct: 111 NSGVVRAKFKSNLPPESM 58
Score = 132 bits (282), Expect(2) = 2e-039
Identities = 58/76 (76%), Positives = 59/76 (77%)
Frame = -2 / +2
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGR DLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLV T
Sbjct: 59 MDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVLT 238
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 239 PSICTSDVVSYWFDLD 286
Score = 107 bits (228), Expect(2) = 4e-031
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +3 / -2
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQDQEQ PL +HLG G PPA
Sbjct: 286 VQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQDQEQ*DPLQVHLG*GHPPA 116
Score = 63.4 bits (132), Expect(3) = 2e-025
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -1 / +1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L VPRDVLLGV PLDLH+RR LVLVRLGP
Sbjct: 193 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGP 288
Score = 56.1 bits (116), Expect(2) = 9e-055
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1 / -3
Query: 97 MVKGRTGQRVRLYVRGTVLGYKR 165
MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 459 MVKGRTGQRVRLYVRGTILGYKR 391
Score = 51.9 bits (107), Expect(2) = 2e-039
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / +1
Query: 165 PLVSKDGAPDVEPHALPRAPLHH 97
PLVS+DGAPDVEP ALPRA LHH
Sbjct: 391 PLVSEDGAPDVEPDALPRASLHH 459
Score = 51.5 bits (106), Expect(3) = 2e-025
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2 / +2
Query: 161 LYPRTVPRT*SLTRCPVRPFTI 96
LYPR VPRT*SLTRCPVRPFT+
Sbjct: 395 LYPRMVPRT*SLTRCPVRPFTM 460
Score = 48.7 bits (100), Expect(2) = 4e-031
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEP 179
GEG HGAAR+ALRPGH P IQ V P
Sbjct: 457 GEGTHGAARQALRPGHHPRIQEVSSTP 377
Score = 39.6 bits (80), Expect(3) = 2e-025
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -1 / +1
Query: 402 LTAHGFRRQVGPELGADDAGVAMR 331
+T HG RR+V ELGADD GVA+R
Sbjct: 49 VTDHGLRREVRLELGADDTGVAVR 120
>gb|CF757907.1|CF757907 DSAF1_24_G07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_24_G07_A011 3', mRNA sequence
Length = 531
Score = 214 bits (462), Expect = 1e-054
Identities = 88/93 (94%), Positives = 89/93 (95%)
Frame = +1 / +2
Query: 157 YKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPH 336
YKRSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPH
Sbjct: 2 YKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPH 181
Query: 337 GNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
GNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 182 GNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 280
Score = 171 bits (369), Expect = 7e-042
Identities = 76/93 (81%), Positives = 77/93 (82%)
Frame = -2 / -1
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 279 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 100
Query: 254 RFPQYHATSSLVFTPSICTSDVVSYWFDLDRLY 156
R P YHATSSLVFTPSICTSDVVSYWFDLD LY
Sbjct: 99 RLPAYHATSSLVFTPSICTSDVVSYWFDLDLLY 1
Score = 116 bits (249), Expect(2) = 5e-030
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +3 / +1
Query: 156 IQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
IQ VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 1 IQEVQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 180
Score = 73.0 bits (153), Expect(2) = 6e-026
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLV 157
H L +VPRDVLLGVHPLDLHQRR LVLVRLGPLV
Sbjct: 103 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGPLV 2
Score = 65.7 bits (137), Expect(2) = 6e-026
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -1 / -3
Query: 438 SLDAAGVHEHPDLTAHGFRRQVGPELGADDAGVAMR 331
+LDAA VHEH DL HG RR+VG ELGADDAGVA+R
Sbjct: 283 TLDAARVHEHSDLAPHGLRRKVGLELGADDAGVAVR 176
Score = 35.4 bits (71), Expect(2) = 5e-030
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 225 RLSPWGARSECSCTRAASK 281
>gb|CL150835.1|CL150835 104_332_10778813_116_31358_365 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778813, DNA
sequence
Length = 758
Score = 176 bits (379), Expect(2) = 3e-054
Identities = 71/77 (92%), Positives = 73/77 (94%)
Frame = +1 / +1
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGN
Sbjct: 511 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGN 690
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRA+F+SNLPPESM
Sbjct: 691 SGVVRAQFKSNLPPESM 741
Score = 133 bits (286), Expect(2) = 3e-041
Identities = 59/76 (77%), Positives = 60/76 (78%)
Frame = -2 / -1
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLN ARTTPELPCGR TLPQM * V *M A+R P YHATSSLVFT
Sbjct: 740 MDSGGRLDLNWARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVFT 561
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 560 PSICTSDVVSYWFDLD 513
Score = 113 bits (241), Expect(2) = 1e-033
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3 / +3
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 513 VQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 683
Score = 69.3 bits (145), Expect(3) = 5e-029
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / -3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L +VPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 606 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGP 511
Score = 57.0 bits (118), Expect(2) = 3e-054
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1 / +3
Query: 46 VHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
V PA+ S + MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 312 VSSPAAEA*AEGSKAATMVKGRTGQRVRLYVRGTILGYKR 431
Score = 56.1 bits (116), Expect(2) = 3e-041
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1 / -1
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
R+ PLVS+DGAPDVEPHAL RA LHH AS
Sbjct: 440 RISPLVSEDGAPDVEPHALSRASLHHGGRLAS 345
Score = 52.8 bits (109), Expect(3) = 5e-029
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -2 / -2
Query: 161 LYPRTVPRT*SLTRCPVRPFTISTLQLLPLESGEAGTWT 45
LYPR VPRT*SLTRCPVRPFT+ L + AG T
Sbjct: 427 LYPRMVPRT*SLTRCPVRPFTMVAALLPSAYASAAGDET 311
Score = 51.0 bits (105), Expect(2) = 1e-033
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +3 / +2
Query: 75 GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEP 179
G+K GEG HG AREALRPGH P IQ V+ P
Sbjct: 341 GRKQGGHHGEGTHGTAREALRPGHHPRIQEVRSAP 445
Score = 44.6 bits (91), Expect(3) = 5e-029
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 402 LTAHGFRRQVGPELGADDAGVAMR 331
+T HG RR+VG ELGADDAGVA+R
Sbjct: 750 VTDHGLRRKVGLELGADDAGVAVR 679
>gb|CL158153.1|CL158153 104_346_10803346_116_31376_322 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803346, DNA
sequence
Length = 707
Score = 191 bits (411), Expect(2) = 1e-053
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = +1 / +2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGN
Sbjct: 8 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGN 187
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKFRSNLPPESM
Sbjct: 188 SGVVRAKFRSNLPPESM 238
Score = 158 bits (340), Expect(2) = 1e-043
Identities = 67/76 (88%), Positives = 67/76 (88%)
Frame = -2 / -3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFT
Sbjct: 237 MDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFT 58
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 57 PSICTSDVVSYWFDLD 10
Score = 137 bits (294), Expect(3) = 4e-037
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = +3 / +1
Query: 156 IQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
+ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PPA
Sbjct: 1 LMQVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPPA 180
Score = 74.4 bits (156), Expect(3) = 5e-027
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
HPL AVPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 103 HPLAAVPRDVLLGVHPLDLHQRRGLVLVRLGP 8
Score = 51.9 bits (107), Expect(3) = 5e-027
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / -2
Query: 393 HGFRRQVGPELGADDAGVAMR 331
HGFRRQVGPELGADDAGVA+R
Sbjct: 238 HGFRRQVGPELGADDAGVAVR 176
Score = 40.0 bits (81), Expect(2) = 1e-053
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 379 PPESMGRKVRVFMYPSSI*R 438
PP GRKVRVFMYPSSI*R
Sbjct: 323 PPLLQGRKVRVFMYPSSI*R 382
Score = 39.1 bits (79), Expect(2) = 1e-043
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / -3
Query: 437 L*MLLGYMNTLTLRPMDSGGR 375
L*MLLGYM TLTLRP + GG+
Sbjct: 381 L*MLLGYMKTLTLRPCNKGGQ 319
Score = 34.1 bits (68), Expect(3) = 4e-037
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 387 IHGP*GQGVHVPQQHLKI 440
+ GP GQG+HVPQ HLK+
Sbjct: 331 VAGPQGQGLHVPQ*HLKV 384
Score = 33.6 bits (67), Expect(3) = 5e-027
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 442 IIFRCCWGT*TP*PYGP 392
+ FRC WGT* P*P GP
Sbjct: 386 LTFRCYWGT*RP*PCGP 336
Score = 22.6 bits (43), Expect(3) = 4e-037
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / +3
Query: 377 CRRNPW 394
CRRNPW
Sbjct: 222 CRRNPW 239
>gb|CW144118.1|CW144118 104_536_11137773_148_34962_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137773, DNA
sequence
Length = 615
Score = 188 bits (405), Expect(3) = 3e-053
Identities = 76/91 (83%), Positives = 82/91 (90%)
Frame = +1 / -3
Query: 121 RVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTH 300
R R YVRGT+LGYKRSKSNQYE TSL+QIEGV+TKEDVAWY GKR+AY+YKAKTKS GT
Sbjct: 457 RRRTYVRGTILGYKRSKSNQYEHTSLLQIEGVSTKEDVAWYGGKRIAYVYKAKTKSDGTA 278
Query: 301 YRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
RCIWGKV RPHGNSGVVRAKFRS+LPP SM
Sbjct: 277 VRCIWGKVTRPHGNSGVVRAKFRSHLPPSSM 185
Score = 147 bits (316), Expect(2) = 3e-037
Identities = 67/106 (63%), Positives = 72/106 (67%)
Frame = -2 / +3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
M+ GGR D NLARTTPELPCGR TLPQM R VP *AIR P YHATSSLV T
Sbjct: 186 MELGGRWDRNLARTTPELPCGRVTLPQMHRTAVPSLLVLALYT*AIRLPPYHATSSLVLT 365
Query: 212 PSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTISTLQLLP 75
PSIC+SDV SYWFDL+RL PR VPRT L R R T ++ LP
Sbjct: 366 PSICSSDVCSYWFDLERL*PRIVPRTYVLRRKQNRTETTGQIRCLP 503
Score = 111 bits (237), Expect(2) = 8e-026
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +3 / -2
Query: 132 LRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLH 311
+R GH P +QA+QVEPVR +VA ADRG +HQGGR VV R+AD L +QGQDQE+RH P+H
Sbjct: 446 VRAGHDPGLQALQVEPVRAHVAAADRGRQHQGGRGVVRRQADRLRVQGQDQERRHRRPMH 267
Query: 312 LGQGRPPA 335
LGQG PA
Sbjct: 266 LGQGHAPA 243
Score = 65.7 bits (137), Expect(4) = 1e-020
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = -1 / +2
Query: 255 PLPAVPRDVLLGVHPLDLHQRRSLVLVRLGPLVSKDGAPDVEP 127
PL AVPR VLLG LDL QRR LVLVRLG LV++D AP V P
Sbjct: 323 PLAAVPRHVLLGADALDLQQRRVLVLVRLGALVAQDRAPHVRP 451
Score = 41.8 bits (85), Expect(4) = 1e-020
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 393 HGFRRQVGPELGADDAGVAMR 331
HG R+VGPELGADDAGV +R
Sbjct: 185 HGAGREVGPELGADDAGVTVR 247
Score = 31.8 bits (63), Expect(3) = 3e-053
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1 / -2
Query: 394 GRKVRVFMYPSSI* 435
G+KVRVFMYPSS+*
Sbjct: 104 GKKVRVFMYPSSV* 63
Score = 29.0 bits (57), Expect(2) = 3e-037
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / +3
Query: 444 RLSLDAAGVHEHPDL 400
RL D AGVHEH DL
Sbjct: 54 RLESDTAGVHEHADL 98
Score = 28.6 bits (56), Expect(2) = 8e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / -3
Query: 401 RSGCSCTPAASKDN 442
RS CSCTPA S N
Sbjct: 97 RSACSCTPAVSDSN 56
Score = 28.6 bits (56), Expect(3) = 3e-053
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / -2
Query: 70 SRGRSCSVEMVKGRTGQRVR 129
S G + MVKGR GQRVR
Sbjct: 608 SYGTPAAASMVKGRQGQRVR 549
Score = 24.0 bits (46), Expect(4) = 1e-020
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2 / +1
Query: 128 LTRCPVRPFTISTLQLLPLE 69
LTR P RPFTI +P +
Sbjct: 550 LTRWPCRPFTILAAAGVPYD 609
Score = 24.0 bits (46), Expect(4) = 1e-020
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 428 LLGYMNTLTLRPMDS 384
LLGYMNT T P ++
Sbjct: 70 LLGYMNTRTFLPCNT 114
>gb|CL174275.1|CL174275 104_378_10891491_148_31770_243 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891491, DNA
sequence
Length = 653
Score = 188 bits (405), Expect(3) = 7e-052
Identities = 76/91 (83%), Positives = 82/91 (90%)
Frame = +1 / -2
Query: 121 RVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTH 300
R R YVRGT+LGYKRSKSNQYE TSL+QIEGV+TKEDVAWY GKR+AY+YKAKTKS GT
Sbjct: 508 RRRTYVRGTILGYKRSKSNQYEHTSLLQIEGVSTKEDVAWYGGKRIAYVYKAKTKSDGTA 329
Query: 301 YRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
RCIWGKV RPHGNSGVVRAKFRS+LPP SM
Sbjct: 328 VRCIWGKVTRPHGNSGVVRAKFRSHLPPSSM 236
Score = 147 bits (316), Expect(2) = 3e-037
Identities = 67/106 (63%), Positives = 72/106 (67%)
Frame = -2 / +3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
M+ GGR D NLARTTPELPCGR TLPQM R VP *AIR P YHATSSLV T
Sbjct: 237 MELGGRWDRNLARTTPELPCGRVTLPQMHRTAVPSLLVLALYT*AIRLPPYHATSSLVLT 416
Query: 212 PSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTISTLQLLP 75
PSIC+SDV SYWFDL+RL PR VPRT L R R T ++ LP
Sbjct: 417 PSICSSDVCSYWFDLERL*PRIVPRTYVLRRKQNRTETTGQIRCLP 554
Score = 111 bits (237), Expect(2) = 8e-026
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +3 / -1
Query: 132 LRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLH 311
+R GH P +QA+QVEPVR +VA ADRG +HQGGR VV R+AD L +QGQDQE+RH P+H
Sbjct: 497 VRAGHDPGLQALQVEPVRAHVAAADRGRQHQGGRGVVRRQADRLRVQGQDQERRHRRPMH 318
Query: 312 LGQGRPPA 335
LGQG PA
Sbjct: 317 LGQGHAPA 294
Score = 31.8 bits (63), Expect(3) = 7e-052
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 394 GRKVRVFMYPSSI* 435
G+KVRVFMYPSS+*
Sbjct: 155 GKKVRVFMYPSSV* 114
Score = 29.0 bits (57), Expect(2) = 3e-037
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / +3
Query: 444 RLSLDAAGVHEHPDL 400
RL D AGVHEH DL
Sbjct: 105 RLESDTAGVHEHADL 149
Score = 28.6 bits (56), Expect(2) = 8e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / -2
Query: 401 RSGCSCTPAASKDN 442
RS CSCTPA S N
Sbjct: 148 RSACSCTPAVSDSN 107
Score = 24.0 bits (46), Expect(3) = 7e-052
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 97 MVKGRTGQRVR 129
+VKGR GQRVR
Sbjct: 632 LVKGRQGQRVR 600
>gb|CW388706.1|CW388706 fsbb001f073j08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f073j08, DNA
sequence
Length = 663
Score = 188 bits (405), Expect(3) = 9e-052
Identities = 76/91 (83%), Positives = 82/91 (90%)
Frame = +1 / +3
Query: 121 RVRLYVRGTVLGYKRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTH 300
R R YVRGT+LGYKRSKSNQYE TSL+QIEGV+TKEDVAWY GKR+AY+YKAKTKS GT
Sbjct: 138 RRRTYVRGTILGYKRSKSNQYEHTSLLQIEGVSTKEDVAWYGGKRIAYVYKAKTKSDGTA 317
Query: 301 YRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
RCIWGKV RPHGNSGVVRAKFRS+LPP SM
Sbjct: 318 VRCIWGKVTRPHGNSGVVRAKFRSHLPPSSM 410
Score = 147 bits (316), Expect(2) = 3e-037
Identities = 67/106 (63%), Positives = 72/106 (67%)
Frame = -2 / -3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
M+ GGR D NLARTTPELPCGR TLPQM R VP *AIR P YHATSSLV T
Sbjct: 409 MELGGRWDRNLARTTPELPCGRVTLPQMHRTAVPSLLVLALYT*AIRLPPYHATSSLVLT 230
Query: 212 PSICTSDVVSYWFDLDRLYPRTVPRT*SLTRCPVRPFTISTLQLLP 75
PSIC+SDV SYWFDL+RL PR VPRT L R R T ++ LP
Sbjct: 229 PSICSSDVCSYWFDLERL*PRIVPRTYVLRRKQNRTETTGQIRCLP 92
Score = 111 bits (237), Expect(2) = 8e-026
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +3 / +2
Query: 132 LRPGHRPWIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLH 311
+R GH P +QA+QVEPVR +VA ADRG +HQGGR VV R+AD L +QGQDQE+RH P+H
Sbjct: 149 VRAGHDPGLQALQVEPVRAHVAAADRGRQHQGGRGVVRRQADRLRVQGQDQERRHRRPMH 328
Query: 312 LGQGRPPA 335
LGQG PA
Sbjct: 329 LGQGHAPA 352
Score = 31.8 bits (63), Expect(3) = 9e-052
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1 / +2
Query: 394 GRKVRVFMYPSSI* 435
G+KVRVFMYPSS+*
Sbjct: 491 GKKVRVFMYPSSV* 532
Score = 29.0 bits (57), Expect(2) = 3e-037
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / -3
Query: 444 RLSLDAAGVHEHPDL 400
RL D AGVHEH DL
Sbjct: 541 RLESDTAGVHEHADL 497
Score = 28.6 bits (56), Expect(2) = 8e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / +3
Query: 401 RSGCSCTPAASKDN 442
RS CSCTPA S N
Sbjct: 498 RSACSCTPAVSDSN 539
Score = 23.5 bits (45), Expect(3) = 9e-052
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 97 MVKGRTGQRVR 129
+VKGR GQRVR
Sbjct: 14 VVKGRQGQRVR 46
>gb|CL188488.1|CL188488 104_405_10901635_116_32454_080 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901635, DNA
sequence
Length = 646
Score = 164 bits (353), Expect(2) = 2e-050
Identities = 66/72 (91%), Positives = 68/72 (94%)
Frame = +1 / -2
Query: 160 KRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHG 339
+RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHG
Sbjct: 216 RRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHG 37
Query: 340 NSGVVRAKFRSN 375
NSGVVRAKF+SN
Sbjct: 36 NSGVVRAKFKSN 1
Score = 117 bits (250), Expect(2) = 4e-035
Identities = 52/69 (75%), Positives = 53/69 (76%)
Frame = -2 / +2
Query: 371 DLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFTPSICTSD 192
DLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLV TPSICTSD
Sbjct: 5 DLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVLTPSICTSD 184
Query: 191 VVSYWFDLD 165
VVSYWFDLD
Sbjct: 185 VVSYWFDLD 211
Score = 107 bits (228), Expect(2) = 4e-031
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +3 / -1
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQDQEQ PL +HLG G PPA
Sbjct: 211 VQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQDQEQ*DPLQVHLG*GHPPA 41
Score = 63.4 bits (132), Expect(3) = 2e-021
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -1 / +1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L VPRDVLLGV PLDLH+RR LVLVRLGP
Sbjct: 118 HALAGVPRDVLLGVDPLDLHERRGLVLVRLGP 213
Score = 56.1 bits (116), Expect(2) = 2e-050
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1 / -2
Query: 97 MVKGRTGQRVRLYVRGTVLGYKR 165
MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 384 MVKGRTGQRVRLYVRGTILGYKR 316
Score = 51.9 bits (107), Expect(2) = 4e-035
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / +1
Query: 165 PLVSKDGAPDVEPHALPRAPLHH 97
PLVS+DGAPDVEP ALPRA LHH
Sbjct: 316 PLVSEDGAPDVEPDALPRASLHH 384
Score = 51.5 bits (106), Expect(3) = 2e-021
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2 / +2
Query: 161 LYPRTVPRT*SLTRCPVRPFTI 96
LYPR VPRT*SLTRCPVRPFT+
Sbjct: 320 LYPRMVPRT*SLTRCPVRPFTM 385
Score = 48.7 bits (100), Expect(2) = 4e-031
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEP 179
GEG HGAAR+ALRPGH P IQ V P
Sbjct: 382 GEGTHGAARQALRPGHHPRIQEVSSTP 302
Score = 26.3 bits (51), Expect(3) = 2e-021
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 366 ELGADDAGVAMR 331
ELGADD GVA+R
Sbjct: 10 ELGADDTGVAVR 45
>gb|CW064610.1|CW064610 104_310_10522666_114_30142 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10522666, DNA
sequence
Length = 573
Score = 179 bits (385), Expect(3) = 1e-049
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = +1 / -3
Query: 160 KRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHG 339
+RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHG
Sbjct: 445 RRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHG 266
Query: 340 NSGVVRAKFRSNLPPESM 393
NSGVVRAKF+SNLPPESM
Sbjct: 265 NSGVVRAKFKSNLPPESM 212
Score = 132 bits (282), Expect(3) = 2e-035
Identities = 58/76 (76%), Positives = 59/76 (77%)
Frame = -2 / +3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGR DLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLV T
Sbjct: 213 MDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVLT 392
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 393 PSICTSDVVSYWFDLD 440
Score = 107 bits (228), Expect(2) = 4e-024
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +3 / -2
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQDQEQ PL +HLG G PPA
Sbjct: 440 VQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQDQEQ*DPLQVHLG*GHPPA 270
Score = 34.1 bits (68), Expect(3) = 2e-035
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +3
Query: 434 *MLLGYMNTLTLRP 393
*MLLGYMNTLTLRP
Sbjct: 84 *MLLGYMNTLTLRP 125
Score = 33.6 bits (67), Expect(3) = 1e-049
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / -3
Query: 394 GRKVRVFMYPSSI* 435
GRKVRVFMYPSSI*
Sbjct: 124 GRKVRVFMYPSSI* 83
Score = 26.7 bits (52), Expect(2) = 4e-024
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -2
Query: 393 GP*GQGVHVPQQHLKI 440
G GQ VHVP QHL++
Sbjct: 125 GAQGQSVHVP*QHLRL 78
Score = 24.0 bits (46), Expect(3) = 1e-049
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -3
Query: 139 RGTVLGYKR 165
RGT+LGYKR
Sbjct: 571 RGTILGYKR 545
Score = 22.6 bits (43), Expect(3) = 2e-035
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 165 PLVSKDGAP 139
PLVS+DGAP
Sbjct: 545 PLVSQDGAP 571
>gb|CL158152.1|CL158152 104_346_10803346_114_31375_322 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10803346, DNA
sequence
Length = 761
Score = 177 bits (382), Expect(2) = 1e-049
Identities = 70/71 (98%), Positives = 70/71 (98%)
Frame = +1 / -1
Query: 181 YETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRA 360
YETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGNSGVVRA
Sbjct: 761 YETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGNSGVVRA 582
Query: 361 KFRSNLPPESM 393
KFRSNLPPESM
Sbjct: 581 KFRSNLPPESM 549
Score = 140 bits (300), Expect(2) = 4e-038
Identities = 61/70 (87%), Positives = 61/70 (87%)
Frame = -2 / +1
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFT
Sbjct: 550 MDSGGRLDLNLARTTPELPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFT 729
Query: 212 PSICTSDVVS 183
PSICTSDVVS
Sbjct: 730 PSICTSDVVS 759
Score = 123 bits (264), Expect(3) = 5e-033
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3 / -3
Query: 183 RDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
RD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PPA
Sbjct: 759 RDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPPA 607
Score = 60.6 bits (126), Expect(3) = 6e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -1 / +3
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLV 181
HPL AVPRDVLLGVHPLDLHQRR LV
Sbjct: 684 HPLAAVPRDVLLGVHPLDLHQRRGLV 761
Score = 51.9 bits (107), Expect(3) = 6e-023
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -1 / +3
Query: 393 HGFRRQVGPELGADDAGVAMR 331
HGFRRQVGPELGADDAGVA+R
Sbjct: 549 HGFRRQVGPELGADDAGVAVR 611
Score = 40.0 bits (81), Expect(2) = 1e-049
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1 / -1
Query: 379 PPESMGRKVRVFMYPSSI*R 438
PP GRKVRVFMYPSSI*R
Sbjct: 464 PPLLQGRKVRVFMYPSSI*R 405
Score = 39.1 bits (79), Expect(2) = 4e-038
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 437 L*MLLGYMNTLTLRPMDSGGR 375
L*MLLGYM TLTLRP + GG+
Sbjct: 406 L*MLLGYMKTLTLRPCNKGGQ 468
Score = 34.1 bits (68), Expect(3) = 5e-033
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / -3
Query: 387 IHGP*GQGVHVPQQHLKI 440
+ GP GQG+HVPQ HLK+
Sbjct: 456 VAGPQGQGLHVPQ*HLKV 403
Score = 33.6 bits (67), Expect(3) = 6e-023
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / +2
Query: 442 IIFRCCWGT*TP*PYGP 392
+ FRC WGT* P*P GP
Sbjct: 401 LTFRCYWGT*RP*PCGP 451
Score = 22.6 bits (43), Expect(3) = 5e-033
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2 / -2
Query: 377 CRRNPW 394
CRRNPW
Sbjct: 565 CRRNPW 548
>gb|CW139265.1|CW139265 104_529_11135145_148_34908_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135145, DNA
sequence
Length = 650
Score = 160 bits (345), Expect(2) = 1e-049
Identities = 65/70 (92%), Positives = 66/70 (94%)
Frame = +1 / +3
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGN
Sbjct: 441 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGN 620
Query: 343 SGVVRAKFRS 372
SGVVRAKF+S
Sbjct: 621 SGVVRAKFKS 650
Score = 120 bits (256), Expect(2) = 4e-037
Identities = 53/69 (76%), Positives = 54/69 (78%)
Frame = -2 / -2
Query: 371 DLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFTPSICTSD 192
DLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLVFTPSICTSD
Sbjct: 649 DLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVFTPSICTSD 470
Query: 191 VVSYWFDLD 165
VVSYWFDLD
Sbjct: 469 VVSYWFDLD 443
Score = 113 bits (241), Expect(2) = 1e-033
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3 / +2
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 443 VQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 613
Score = 69.3 bits (145), Expect(3) = 1e-024
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / -1
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L +VPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 536 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGP 441
Score = 57.0 bits (118), Expect(2) = 1e-049
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 46 VHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
V PA+ S + MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 242 VSSPAAEA*AEGSKAATMVKGRTGQRVRLYVRGTILGYKR 361
Score = 56.1 bits (116), Expect(2) = 4e-037
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1 / -2
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
R+ PLVS+DGAPDVEPHAL RA LHH AS
Sbjct: 370 RISPLVSEDGAPDVEPHALSRASLHHGGRLAS 275
Score = 52.8 bits (109), Expect(3) = 1e-024
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -2 / -3
Query: 161 LYPRTVPRT*SLTRCPVRPFTISTLQLLPLESGEAGTWT 45
LYPR VPRT*SLTRCPVRPFT+ L + AG T
Sbjct: 357 LYPRMVPRT*SLTRCPVRPFTMVAALLPSAYASAAGDET 241
Score = 51.0 bits (105), Expect(2) = 1e-033
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +3 / +1
Query: 75 GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEP 179
G+K GEG HG AREALRPGH P IQ V+ P
Sbjct: 271 GRKQGGHHGEGTHGTAREALRPGHHPRIQEVRSAP 375
Score = 29.5 bits (58), Expect(3) = 1e-024
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 372 GPELGADDAGVAMR 331
G ELGADDAGVA+R
Sbjct: 650 GLELGADDAGVAVR 609
>gb|CW139264.1|CW139264 104_529_11135145_116_34904_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135145, DNA
sequence
Length = 479
Score = 178 bits (383), Expect(2) = 6e-048
Identities = 72/77 (93%), Positives = 73/77 (94%)
Frame = +1 / -2
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGN
Sbjct: 445 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGN 266
Query: 343 SGVVRAKFRSNLPPESM 393
SGVVRAKF+SNLPPESM
Sbjct: 265 SGVVRAKFKSNLPPESM 215
Score = 136 bits (292), Expect(2) = 2e-035
Identities = 60/76 (78%), Positives = 61/76 (80%)
Frame = -2 / +3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLVFT
Sbjct: 216 MDSGGRLDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVFT 395
Query: 212 PSICTSDVVSYWFDLD 165
PSICTSDVVSYWFDLD
Sbjct: 396 PSICTSDVVSYWFDLD 443
Score = 113 bits (241), Expect(2) = 9e-027
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3 / -1
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 443 VQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 273
Score = 69.3 bits (145), Expect(3) = 9e-022
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / +2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L +VPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 350 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGP 445
Score = 44.6 bits (91), Expect(3) = 9e-022
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1 / +2
Query: 402 LTAHGFRRQVGPELGADDAGVAMR 331
+T HG RR+VG ELGADDAGVA+R
Sbjct: 206 VTDHGLRRKVGLELGADDAGVAVR 277
Score = 34.1 bits (68), Expect(2) = 6e-048
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 394 GRKVRVFMYPSSI*R*SE 447
GRKVRVFMYPSSI* * +
Sbjct: 125 GRKVRVFMYPSSI*G*ED 72
Score = 34.1 bits (68), Expect(2) = 2e-035
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +1
Query: 434 *MLLGYMNTLTLRP 393
*MLLGYMNTLTLRP
Sbjct: 85 *MLLGYMNTLTLRP 126
Score = 29.5 bits (58), Expect(2) = 9e-027
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 393 GP*GQGVHVPQQHLKI 440
G GQ VHVP+QHL++
Sbjct: 126 GAQGQSVHVPEQHLRL 79
Score = 28.1 bits (55), Expect(3) = 9e-022
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 441 LSLDAAGVHEHPDL 400
L+LDAA VHEH DL
Sbjct: 78 LTLDAARVHEHSDL 119
>gb|AW746621.1|AW746621 WS1_54_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 492
Score = 188 bits (404), Expect = 1e-046
Identities = 77/82 (93%), Positives = 78/82 (95%)
Frame = +1 / +1
Query: 190 TSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFR 369
TSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGNSGVVRAKF+
Sbjct: 10 TSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGNSGVVRAKFK 189
Query: 370 SNLPPESMGRKVRVFMYPSSI* 435
SNLPPESMGRKVRVFMYPSSI*
Sbjct: 190 SNLPPESMGRKVRVFMYPSSI* 255
Score = 141 bits (302), Expect = 1e-032
Identities = 64/82 (78%), Positives = 65/82 (79%)
Frame = -2 / -2
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 254 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 75
Query: 254 RFPQYHATSSLVFTPSICTSDV 189
R P YHATSSLV TPSICTSDV
Sbjct: 74 RLPAYHATSSLVLTPSICTSDV 9
Score = 89.0 bits (188), Expect(2) = 1e-021
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 189 YVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
+VA ADRGG+HQGGRRVV R+A G+HLQGQDQEQ PL +HLG G PPA
Sbjct: 9 HVARADRGGQHQGGRRVVRRQAHGVHLQGQDQEQ*DPLQVHLG*GHPPA 155
Score = 35.0 bits (70), Expect(2) = 1e-021
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 200 RLSPWGARSECSCTLAASK 256
>gb|AW746661.1|AW746661 WS1_54_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 496
Score = 188 bits (404), Expect = 1e-046
Identities = 77/82 (93%), Positives = 78/82 (95%)
Frame = +1 / +1
Query: 190 TSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFR 369
TSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGNSGVVRAKF+
Sbjct: 10 TSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGNSGVVRAKFK 189
Query: 370 SNLPPESMGRKVRVFMYPSSI* 435
SNLPPESMGRKVRVFMYPSSI*
Sbjct: 190 SNLPPESMGRKVRVFMYPSSI* 255
Score = 141 bits (302), Expect = 1e-032
Identities = 64/82 (78%), Positives = 65/82 (79%)
Frame = -2 / -3
Query: 434 *MLLGYMNTLTLRPMDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AI 255
*MLLGYMNTLTLRPMDSGGR DLNLARTTPELPCGR TLPQM * V *M A+
Sbjct: 254 *MLLGYMNTLTLRPMDSGGRFDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAM 75
Query: 254 RFPQYHATSSLVFTPSICTSDV 189
R P YHATSSLV TPSICTSDV
Sbjct: 74 RLPAYHATSSLVLTPSICTSDV 9
Score = 89.0 bits (188), Expect(2) = 1e-021
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +3 / +3
Query: 189 YVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
+VA ADRGG+HQGGRRVV R+A G+HLQGQDQEQ PL +HLG G PPA
Sbjct: 9 HVARADRGGQHQGGRRVVRRQAHGVHLQGQDQEQ*DPLQVHLG*GHPPA 155
Score = 35.0 bits (70), Expect(2) = 1e-021
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 380 RRNPWAVRSGCSCTPAASK 436
R +PW RS CSCT AASK
Sbjct: 200 RLSPWGARSECSCTLAASK 256
>gb|CW363805.1|CW363805 fsbb001f035j05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035j05, DNA
sequence
Length = 688
Score = 149 bits (321), Expect(2) = 5e-046
Identities = 60/65 (92%), Positives = 61/65 (93%)
Frame = +1 / -1
Query: 160 KRSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHG 339
+RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHG
Sbjct: 196 RRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHG 17
Query: 340 NSGVV 354
NSGVV
Sbjct: 16 NSGVV 2
Score = 107 bits (228), Expect(2) = 4e-031
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +3 / -3
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VQVEPVRD+VA ADRGG+HQGGRRVV R+A G+HLQGQDQEQ PL +HLG G PPA
Sbjct: 191 VQVEPVRDHVARADRGGQHQGGRRVVRRQAHGVHLQGQDQEQ*DPLQVHLG*GHPPA 21
Score = 104 bits (221), Expect(2) = 4e-031
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = -2 / +3
Query: 353 TTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWF 174
TTPELPCGR TLPQM * V *M A+R P YHATSSLV TPSICTSDVVSYWF
Sbjct: 3 TTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVLTPSICTSDVVSYWF 182
Query: 173 DLD 165
DLD
Sbjct: 183 DLD 191
Score = 56.1 bits (116), Expect(2) = 5e-046
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +1 / -1
Query: 97 MVKGRTGQRVRLYVRGTVLGYKR 165
MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 364 MVKGRTGQRVRLYVRGTILGYKR 296
Score = 51.9 bits (107), Expect(2) = 4e-031
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -1 / +2
Query: 165 PLVSKDGAPDVEPHALPRAPLHH 97
PLVS+DGAPDVEP ALPRA LHH
Sbjct: 296 PLVSEDGAPDVEPDALPRASLHH 364
Score = 48.7 bits (100), Expect(2) = 4e-031
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 99 GEGAHGAAREALRPGHRPWIQAVQVEP 179
GEG HGAAR+ALRPGH P IQ V P
Sbjct: 362 GEGTHGAARQALRPGHHPRIQEVSSTP 282
>gb|CW194713.1|CW194713 104_618_11180246_148_36800_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180246, DNA
sequence
Length = 654
Score = 165 bits (354), Expect(2) = 6e-044
Identities = 66/71 (92%), Positives = 67/71 (94%)
Frame = +1 / +3
Query: 181 YETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRA 360
YETTSLVQIEGVNTKEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGNSGVVRA
Sbjct: 3 YETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGNSGVVRA 182
Query: 361 KFRSNLPPESM 393
KF+SNLPPESM
Sbjct: 183 KFKSNLPPESM 215
Score = 121 bits (259), Expect(2) = 5e-031
Identities = 55/71 (77%), Positives = 56/71 (78%)
Frame = -2 / -3
Query: 392 MDSGGRLDLNLARTTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFT 213
MDSGGRLDLNLARTTPELPCGR TLPQM * V *M A+R P YHATSSLVFT
Sbjct: 214 MDSGGRLDLNLARTTPELPCGRVTLPQMHL*RVSLLLVLAL*MYAMRLPAYHATSSLVFT 35
Query: 212 PSICTSDVVSY 180
PSICTSDVVSY
Sbjct: 34 PSICTSDVVSY 2
Score = 101 bits (216), Expect(2) = 3e-023
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = +3 / +2
Query: 180 VRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPPA 335
VRD+VAGADRGGEHQGGRRVV +A G+HLQGQDQEQR PL +HLGQG P A
Sbjct: 2 VRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQDQEQRDPLQVHLGQGHPSA 157
Score = 34.1 bits (68), Expect(2) = 5e-031
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / -1
Query: 434 *MLLGYMNTLTLRP 393
*MLLGYMNTLTLRP
Sbjct: 345 *MLLGYMNTLTLRP 304
Score = 34.1 bits (68), Expect(2) = 6e-044
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 394 GRKVRVFMYPSSI*R*SE 447
GRKVRVFMYPSSI* * +
Sbjct: 305 GRKVRVFMYPSSI*G*ED 358
Score = 29.5 bits (58), Expect(2) = 3e-023
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 393 GP*GQGVHVPQQHLKI 440
G GQ VHVP+QHL++
Sbjct: 304 GAQGQSVHVPEQHLRL 351
>gb|CW471713.1|CW471713 fsbb001f225n01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f225n01, DNA
sequence
Length = 272
Score = 158 bits (340), Expect = 7e-038
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1 / +1
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGN 342
RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKV RPHGN
Sbjct: 82 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVTRPHGN 261
Query: 343 SGV 351
SGV
Sbjct: 262 SGV 270
Score = 142 bits (305), Expect = 5e-033
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3 / +3
Query: 153 WIQAVQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLHLGQGRPP 332
W+ VQVEPVRD+VAGADRGGEHQGGRRVVLR+ADGLHLQGQDQEQRHPLPLHLGQG PP
Sbjct: 72 WLMQVQVEPVRDHVAGADRGGEHQGGRRVVLRQADGLHLQGQDQEQRHPLPLHLGQGHPP 251
Query: 333 A 335
A
Sbjct: 252 A 254
Score = 133 bits (286), Expect = 2e-030
Identities = 59/79 (74%), Positives = 59/79 (74%)
Frame = -2 / -1
Query: 353 TTPELPCGRATLPQMQR*WVPXXXXXXX*M*AIRFPQYHATSSLVFTPSICTSDVVSYWF 174
TTPELPCGR TLPQMQR*WVP *M*AIR PQYHATSSLVFTPSICTSDVVSYWF
Sbjct: 272 TTPELPCGRVTLPQMQR*WVPLLLVLAL*M*AIRLPQYHATSSLVFTPSICTSDVVSYWF 93
Query: 173 DLDRLYPRTVPRT*SLTRC 117
DLD PR P S C
Sbjct: 92 DLDLHQPRPPPARASQHGC 36
>gb|AI724793.1|AI724793 RHIZ1_9_C11.y2_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 291
Score = 85.8 bits (181), Expect(3) = 5e-035
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2 / -3
Query: 596 IILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
I+ VIHNTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 253 IMFQVIHNTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 107
Score = 84.5 bits (178), Expect(4) = 2e-034
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1 / +3
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL IT +II
Sbjct: 120 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL*IT*NII 254
Score = 83.1 bits (175), Expect(2) = 3e-032
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -1
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 246 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 109
Score = 81.7 bits (172), Expect(3) = 5e-035
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -1 / -2
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGFRRQVGPELGADD 349
K +L TF+LSLDA GVHE PDL AHGFRRQVGPELGADD
Sbjct: 122 KSMILQTFKLSLDATGVHEDPDLAAHGFRRQVGPELGADD 3
Score = 76.2 bits (160), Expect(2) = 3e-032
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -2 / -3
Query: 470 RRKGSSTHSDYL*MLLGYMNTLTLRPMDSGGRLDLNLARTT 348
R+ SS S+YL*MLLGYM TLTLRPMDSGGRLDLNLARTT
Sbjct: 124 RKA*SSKPSNYL*MLLGYMKTLTLRPMDSGGRLDLNLARTT 2
Score = 76.2 bits (160), Expect(4) = 2e-034
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +1 / +3
Query: 349 VVRAKFRSNLPPESMGRKVRVFMYPSSI*R*SECVED 459
VVRAKFRSNLPPESMGRKVRVFMYPSSI*R* E +ED
Sbjct: 3 VVRAKFRSNLPPESMGRKVRVFMYPSSI*R*FEGLED 113
Score = 20.3 bits (38), Expect(4) = 2e-034
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +2
Query: 591 YYMKFKLEL 617
YYM+ KLEL
Sbjct: 251 YYMELKLEL 277
Score = 18.9 bits (35), Expect(4) = 2e-034
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3 / +2
Query: 453 GGPFSSRFY 479
G FSSRFY
Sbjct: 110 GSCFSSRFY 136
Score = 18.5 bits (34), Expect(3) = 5e-035
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2 / -3
Query: 614 F*LKLHIIL 588
F*L+LHII+
Sbjct: 274 F*LQLHIIM 248
>gb|CW118310.1|CW118310 104_494_11108134_148_34621_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11108134, DNA
sequence
Length = 345
Score = 133 bits (285), Expect(2) = 2e-034
Identities = 52/57 (91%), Positives = 53/57 (92%)
Frame = +1 / -2
Query: 223 KEDVAWYCGKRMAYIYKAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
KEDVAWY GKRMAYIYKAKTKSS T YRCIWGKV RPHGNSGVVRAKF+SNLPPESM
Sbjct: 344 KEDVAWYAGKRMAYIYKAKTKSSETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESM 174
Score = 33.6 bits (67), Expect(2) = 2e-034
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / -2
Query: 394 GRKVRVFMYPSSI* 435
GRKVRVFMYPSSI*
Sbjct: 86 GRKVRVFMYPSSI* 45
>gb|CW128228.1|CW128228 104_509_11113891_148_34748_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113891, DNA
sequence
Length = 570
Score = 109 bits (233), Expect(2) = 3e-034
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = +1 / +3
Query: 163 RSKSNQYETTSLVQIEGVNTKEDVAWYCGKRMAYIYKAKTKSSGTHYRCI 312
RSKSNQYETTSLVQIEGVNTKEDVAWY GKRMAYIYKAK +SS T YRCI
Sbjct: 420 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKDQSSETRYRCI 569
Score = 92.7 bits (196), Expect(2) = 2e-027
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +3 / +2
Query: 165 VQVEPVRDYVAGADRGGEHQGGRRVVLREADGLHLQGQDQEQRHPLPLH 311
VQVEPVRD+VAGADRGGEHQGGRRVV +A G+HLQGQ EQR PL +H
Sbjct: 422 VQVEPVRDHVAGADRGGEHQGGRRVVRWQAHGVHLQGQRPEQRDPLQVH 568
Score = 75.8 bits (159), Expect(2) = 7e-024
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -2 / -3
Query: 266 M*AIRFPQYHATSSLVFTPSICTSDVVSYWFDLD 165
M A+R P YHATSSLVFTPSICTSDVVSYWFDLD
Sbjct: 523 MYAMRLPAYHATSSLVFTPSICTSDVVSYWFDLD 422
Score = 69.3 bits (145), Expect(2) = 5e-021
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / -2
Query: 258 HPLPAVPRDVLLGVHPLDLHQRRSLVLVRLGP 163
H L +VPRDVLLGVHPLDLHQRR LVLVRLGP
Sbjct: 515 HALASVPRDVLLGVHPLDLHQRRGLVLVRLGP 420
Score = 57.0 bits (118), Expect(2) = 3e-034
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 46 VHVPASPDSRGRSCSVEMVKGRTGQRVRLYVRGTVLGYKR 165
V PA+ S + MVKGRTGQRVRLYVRGT+LGYKR
Sbjct: 221 VSSPAAEA*AEGSKAATMVKGRTGQRVRLYVRGTILGYKR 340
Score = 56.1 bits (116), Expect(2) = 7e-024
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = -1 / -3
Query: 174 RLGPLVSKDGAPDVEPHALPRAPLHHLDAAAS 79
R+ PLVS+DGAPDVEPHAL RA LHH AS
Sbjct: 349 RISPLVSEDGAPDVEPHALSRASLHHGGRLAS 254
Score = 52.8 bits (109), Expect(2) = 5e-021
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -2 / -1
Query: 161 LYPRTVPRT*SLTRCPVRPFTISTLQLLPLESGEAGTWT 45
LYPR VPRT*SLTRCPVRPFT+ L + AG T
Sbjct: 336 LYPRMVPRT*SLTRCPVRPFTMVAALLPSAYASAAGDET 220
Score = 51.0 bits (105), Expect(2) = 2e-027
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +3 / +1
Query: 75 GQKLQRRDGEGAHGAAREALRPGHRPWIQAVQVEP 179
G+K GEG HG AREALRPGH P IQ V+ P
Sbjct: 250 GRKQGGHHGEGTHGTAREALRPGHHPRIQEVRSAP 354
>gb|AI724042.1|AI724042 RHIZ1_25_E09.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 254
Score = 85.8 bits (181), Expect(3) = 2e-027
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2 / -1
Query: 596 IILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
I+ VIHNTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 215 IMFQVIHNTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 69
Score = 84.5 bits (178), Expect(4) = 1e-029
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1 / +1
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL IT +II
Sbjct: 82 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL*IT*NII 216
Score = 83.1 bits (175), Expect(2) = 2e-025
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / -2
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 208 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 71
Score = 59.3 bits (123), Expect(4) = 1e-029
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 386 NPWAVRSGCSCTPAASKDNLNVWRTLFF 469
NPWA RSG SCTP ASKDNL VWR + F
Sbjct: 2 NPWAARSGSSCTPVASKDNLKVWRIMLF 85
Score = 55.6 bits (115), Expect(3) = 2e-027
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / -2
Query: 469 EEKGPPHIQIIFRCCWGT*TP*PYGPWI 386
E+ PP++QIIFRC WGT* P*P GPWI
Sbjct: 85 EKHDPPNLQIIFRCYWGT*RP*PCGPWI 2
Score = 52.8 bits (109), Expect(2) = 2e-025
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -1 / -3
Query: 468 KKRVLHTFRLSLDAAGVHEHPDLTAHGF 385
K +L TF+LSLDA GVHE PDL AHGF
Sbjct: 84 KSMILQTFKLSLDATGVHEDPDLAAHGF 1
Score = 20.3 bits (38), Expect(4) = 1e-029
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 591 YYMKFKLEL 617
YYM+ KLEL
Sbjct: 213 YYMELKLEL 239
Score = 18.9 bits (35), Expect(4) = 1e-029
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3 / +3
Query: 453 GGPFSSRFY 479
G FSSRFY
Sbjct: 72 GSCFSSRFY 98
Score = 18.5 bits (34), Expect(3) = 2e-027
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 614 F*LKLHIIL 588
F*L+LHII+
Sbjct: 236 F*LQLHIIM 210
>gb|CW379489.1|CW379489 fsbb001f058m16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f058m16, DNA
sequence
Length = 752
Score = 79.9 bits (168), Expect(3) = 8e-028
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +1 / -3
Query: 271 KAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESM 393
+ + +++ YRCIWGKV RPHGNSGVVRAKF+SNLPPESM
Sbjct: 714 RPRPRAARPRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESM 592
Score = 48.7 bits (100), Expect(3) = 8e-028
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +1 / -2
Query: 235 AWYCGKRMAYIYKAKTKSSGT 297
AWY GKRMAYIYKAKTKSS T
Sbjct: 751 AWYAGKRMAYIYKAKTKSSET 689
Score = 34.1 bits (68), Expect(3) = 8e-028
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 394 GRKVRVFMYPSSI*R*SE 447
GRKVRVFMYPSSI* * +
Sbjct: 502 GRKVRVFMYPSSI*G*ED 449
>gb|CF757903.1|CF757903 DSAF1_24_F07.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_24_F07_A011 3', mRNA sequence
Length = 414
Score = 122 bits (260), Expect = 8e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1 / +1
Query: 271 KAKTKSSGTHYRCIWGKVARPHGNSGVVRAKFRSNLPPESMGRKVRVFMYPSSI* 435
KAKTKSS + YRC+WGKV RPHGNSGVVRAKF+SNLPPESMGRKVRVFMYPSSI*
Sbjct: 1 KAKTKSSESRYRCMWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI* 165
>gb|CL175100.1|CL175100 104_380_10892166_148_31766_150 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892166, DNA
sequence
Length = 738
Score = 85.8 bits (181), Expect(3) = 2e-023
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2 / +1
Query: 596 IILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
I+ VIHNTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 160 IMFQVIHNTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 306
Score = 84.5 bits (178), Expect(4) = 9e-024
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1 / -2
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL IT +II
Sbjct: 293 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL*IT*NII 159
Score = 83.1 bits (175), Expect(3) = 6e-021
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / +2
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 167 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 304
Score = 32.7 bits (65), Expect(4) = 9e-024
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 663 MLLLHLDQRFCDFMS 707
ML LHL+QR CDFMS
Sbjct: 92 MLSLHLEQRLCDFMS 48
Score = 32.7 bits (65), Expect(3) = 2e-023
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +3
Query: 707 AHEITEPLIKMQ*EHIMRLKSH 642
AHEIT PL+KMQ EHI H
Sbjct: 48 AHEIT*PLLKMQREHIRLTHHH 113
Score = 29.9 bits (59), Expect(3) = 6e-021
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 708 GS*NHRTVDQDAIRAY 661
GS*NH TV QDA RAY
Sbjct: 47 GS*NHITVAQDATRAY 94
Score = 29.5 bits (58), Expect(3) = 2e-023
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 659 MRLKSHHTKVWQTN 618
+RL HHTK+WQ N
Sbjct: 93 IRLTHHHTKIWQIN 134
Score = 26.3 bits (51), Expect(3) = 6e-021
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 655 D*RVIIQKYGK 623
D*R+IIQKYGK
Sbjct: 97 D*RIIIQKYGK 129
Score = 25.4 bits (49), Expect(4) = 9e-024
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -2
Query: 624 LPYFCMMTL*SHNMLL 671
LPYFCMM *S+ + L
Sbjct: 128 LPYFCMMMR*SYMLSL 81
Score = 23.5 bits (45), Expect(4) = 9e-024
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2 / -3
Query: 425 AASKDNLNVWRTLFF 469
+++ DNL VWR + F
Sbjct: 334 SSNADNLKVWRIMLF 290
>gb|CL174634.1|CL174634 104_379_10891782_148_31768_150 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10891782, DNA
sequence
Length = 718
Score = 85.8 bits (181), Expect(3) = 2e-023
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = -2 / +1
Query: 596 IILPVIHNTKTQRTLNGSQIDSSTC*LST*TQPLQGQLKIKSRRKGSST 450
I+ VIHNTKT RTL GSQIDSSTC*LST*TQPLQGQL IKSRRK S+
Sbjct: 160 IMFQVIHNTKTWRTLKGSQIDSSTC*LST*TQPLQGQL*IKSRRKA*SS 306
Score = 84.5 bits (178), Expect(4) = 9e-024
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +1 / -3
Query: 463 FLLDFIFSCPCKGCVQVES*QVELSI*EPFKVL*VLVLWITGSII 597
FLLDFI SCPCKGCVQVES*QVELSI*EPFKVL VLVL IT +II
Sbjct: 293 FLLDFI*SCPCKGCVQVES*QVELSI*EPFKVLQVLVL*IT*NII 159
Score = 83.1 bits (175), Expect(3) = 6e-021
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -3 / +2
Query: 589 FQ*SITPKLREL*MVLR*TAQPANSQPEHNPYKDS*R*NLEEKGPP 452
F+* ITPKL EL* VL+*TAQPANSQPEHNPYKDS R*NLEEK P
Sbjct: 167 FK*FITPKLGEL*RVLK*TAQPANSQPEHNPYKDSFR*NLEEKHDP 304
Score = 32.7 bits (65), Expect(4) = 9e-024
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 663 MLLLHLDQRFCDFMS 707
ML LHL+QR CDFMS
Sbjct: 92 MLSLHLEQRLCDFMS 48
Score = 32.7 bits (65), Expect(3) = 2e-023
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2 / +3
Query: 707 AHEITEPLIKMQ*EHIMRLKSH 642
AHEIT PL+KMQ EHI H
Sbjct: 48 AHEIT*PLLKMQREHIRLTHHH 113
Score = 29.9 bits (59), Expect(3) = 6e-021
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 708 GS*NHRTVDQDAIRAY 661
GS*NH TV QDA RAY
Sbjct: 47 GS*NHITVAQDATRAY 94
Score = 29.5 bits (58), Expect(3) = 2e-023
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / +3
Query: 659 MRLKSHHTKVWQTN 618
+RL HHTK+WQ N
Sbjct: 93 IRLTHHHTKIWQIN 134
Score = 26.3 bits (51), Expect(3) = 6e-021
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 655 D*RVIIQKYGK 623
D*R+IIQKYGK
Sbjct: 97 D*RIIIQKYGK 129
Score = 25.4 bits (49), Expect(4) = 9e-024
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 624 LPYFCMMTL*SHNMLL 671
LPYFCMM *S+ + L
Sbjct: 128 LPYFCMMMR*SYMLSL 81
Score = 23.5 bits (45), Expect(4) = 9e-024
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2 / -1
Query: 425 AASKDNLNVWRTLFF 469
+++ DNL VWR + F
Sbjct: 334 SSNADNLKVWRIMLF 290
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 749,569,207
Number of Sequences: 832831
Number of extensions: 9838020
Number of successful extensions: 97843
Number of sequences better than 1.0e-020: 53
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21505276442
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)