TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE6a06.yg.3.1
(2118 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT481537.1|DT481537 WS02532.BR_C11 PT-MB-N-A-15 Populus ... 354 e-104
gb|AJ778690.1|AJ778690 AJ778690 Populus euphratica cambium ... 339 3e-092
gb|DT516736.1|DT516736 WS02432.B21_E04 PTxD-ICC-N-A-14 Popu... 300 2e-088
gb|BU867731.1|BU867731 M103F07 Populus flower cDNA library ... 306 3e-082
gb|CX176080.1|CX176080 A06_69-25_02.ab1 leaf inoculated wit... 292 6e-078
gb|CV276979.1|CV276979 WS0142.B21_F07 PTxD-IL-A-5 Populus t... 236 5e-075
gb|DT486867.1|DT486867 WS02532.B21_C11 PT-MB-N-A-15 Populus... 234 9e-069
gb|AJ774232.1|AJ774232 AJ774232 Populus euphratica shoot 3-... 248 1e-064
gb|CV232356.1|CV232356 WS0197.B21_F10 PT-DX-N-A-10 Populus ... 183 2e-053
gb|CK090585.1|CK090585 F014P37.3pR Populus flower cDNA libr... 171 1e-049
gb|CX174759.1|CX174759 F05_69-118_11.ab1 leaf inoculated wi... 191 7e-049
gb|DT495466.1|DT495466 WS01120.BR_I19 PT-P-FL-A-2 Populus t... 160 2e-046
gb|BI138264.1|BI138264 F102P26Y Populus flower cDNA library... 65 6e-038
gb|CV253767.1|CV253767 WS0222.B21_P01 PTxD-ICC-A-12 Populus... 126 2e-036
gb|CV257906.1|CV257906 WS0247.B21_P16 PTxD-ICC-N-A-14 Popul... 137 3e-031
gb|DT507993.1|DT507993 WS02419.BR_M09 PTxD-ICC-N-A-14 Popul... 137 3e-031
gb|DT509671.1|DT509671 WS02424.BR_G01 PTxD-ICC-N-A-14 Popul... 137 3e-031
gb|DT514277.1|DT514277 WS02424.B21_G01 PTxD-ICC-N-A-14 Popu... 137 3e-031
gb|DT517392.1|DT517392 WS02434.B21_C23 PTxD-ICC-N-A-14 Popu... 137 3e-031
gb|BI120432.1|BI120432 F014P84Y Populus flower cDNA library... 118 3e-028
gb|BI120283.1|BI120283 F013P01Y Populus flower cDNA library... 110 3e-023
>gb|DT481537.1|DT481537 WS02532.BR_C11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_C11 5', mRNA sequence
Length = 885
Score = 354 bits (767), Expect(2) = e-104
Identities = 137/184 (74%), Positives = 161/184 (87%)
Frame = +2 / +3
Query: 911 KADESELRLAQLQHQLPTNEPGALMNLVEESXXXXXXXXXXXXCKGLFKNLKFYLSREVP 1090
+ADESELRLAQLQHQLP+NEPGALM+L+E + C+ LFKN+KF+L REVP
Sbjct: 57 QADESELRLAQLQHQLPSNEPGALMHLMENAECENEDDQDTKECRRLFKNMKFFLGREVP 236
Query: 1091 RESLLFIIPAFGGTVSWEGEGAPFKEIDEDITHQIVDRPTQSHVFLSREYVQPQWVFDCV 1270
RESLLF+IPAFGG VSW+GE AP+KE D+ ITHQIVDRPTQ H +LSREYVQPQW++DC+
Sbjct: 237 RESLLFVIPAFGGVVSWDGEAAPYKESDQSITHQIVDRPTQGHKYLSREYVQPQWIYDCI 416
Query: 1271 NARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEVLPLPGIGDE 1450
NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+NEVLP+PG+G E
Sbjct: 417 NARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKNEVLPMPGVGKE 596
Query: 1451 DLDN 1462
DLD+
Sbjct: 597 DLDD 608
Score = 200 bits (432), Expect = 2e-050
Identities = 107/180 (59%), Positives = 113/180 (62%)
Frame = -1 / -3
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 604 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 425
Query: 1278 RAFTQSKTHCG*TYSLERKTWLCVGLXXXXXXXXXXXSLNGAPSPSHETVPPNAGIINNR 1099
RA QS HCG*TYSLER VGL SL GA SPS ET PP AGI +
Sbjct: 424 RALMQS*IHCG*TYSLERYL*PWVGLSTI**VMLWSDSLYGAASPSQETTPPKAGITKSN 245
Query: 1098 DSLGTSRLK*NFKFLNKPLQXXXXXXXXXXXXXXSTRFISAPGSLVGS*C*SCANLSSDS 919
DSLGTSR K NF FL L S R I+APGSL GS*C*S A+LSSDS
Sbjct: 244 DSLGTSRPKKNFIFLKSLLHSFVS*SSSFSHSAFSIRCINAPGSLEGS*C*S*ASLSSDS 65
Score = 93.2 bits (197), Expect(2) = 7e-021
Identities = 44/97 (45%), Positives = 62/97 (63%)
Frame = -3 / -2
Query: 1462 IV*IFITNTWKRQHLIASSSLEPLYCLCILRHVALGIIVHKRRQMWWRYSSNKITFCWQY 1283
I+*IF++ + + I SSL+ LCI+R++A II++KRRQ+ R S+ I+F WQY
Sbjct: 608 II*IFLSYSRHGKDFIFGSSLQAFDSLCIIRNIAFCIIINKRRQVRGRNPSHHISFSWQY 429
Query: 1282 DTSIYTIKDPLWLNILPGEENMALCRPINNLVSDIFV 1172
D I I +PLWLNI + M L PINNL+S+ V
Sbjct: 428 DPCINAIINPLWLNIFSRKVFMTLGWPINNLMSNALV 318
Score = 47.8 bits (98), Expect(2) = e-104
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / +3
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 603 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 734
Score = 33.1 bits (66), Expect(2) = 7e-021
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -3 / -2
Query: 994 YKIHQCTRFIGWELMLKL 941
+++HQCT F+G +LMLKL
Sbjct: 140 HQVHQCTGFVGRKLMLKL 87
>gb|AJ778690.1|AJ778690 AJ778690 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600004G01F1, mRNA sequence
Length = 590
Score = 339 bits (735), Expect = 3e-092
Identities = 131/176 (74%), Positives = 154/176 (87%)
Frame = +2 / +1
Query: 911 KADESELRLAQLQHQLPTNEPGALMNLVEESXXXXXXXXXXXXCKGLFKNLKFYLSREVP 1090
+ADESELRLAQLQHQLP+NEPGALM+L+E + C+ LFKN+KF+L REVP
Sbjct: 61 QADESELRLAQLQHQLPSNEPGALMHLMENAECENEDDQDTKECRRLFKNMKFFLGREVP 240
Query: 1091 RESLLFIIPAFGGTVSWEGEGAPFKEIDEDITHQIVDRPTQSHVFLSREYVQPQWVFDCV 1270
RES+LF+IPAFGG VSW+GE AP+KE D+ ITHQIVDRPTQ H +LSREYVQPQW++DC+
Sbjct: 241 RESMLFVIPAFGGVVSWDGEAAPYKESDQSITHQIVDRPTQGHKYLSREYVQPQWIYDCI 420
Query: 1271 NARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEVLPLPG 1438
NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+NEVLP+PG
Sbjct: 421 NARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKNEVLPMPG 588
Score = 190 bits (410), Expect = 2e-047
Identities = 103/173 (59%), Positives = 108/173 (62%)
Frame = -1 / -1
Query: 1437 PGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMIRAFTQSK 1258
PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMIRA QS
Sbjct: 587 PGMGRTSFLAAACRRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMIRALMQS* 408
Query: 1257 THCG*TYSLERKTWLCVGLXXXXXXXXXXXSLNGAPSPSHETVPPNAGIINNRDSLGTSR 1078
HCG*TYSLER VGL SL GA SPS ET PP AGI + DSLGTSR
Sbjct: 407 IHCG*TYSLERYL*PWVGLSTI**VMLWSDSLYGAASPSQETTPPKAGITKSIDSLGTSR 228
Query: 1077 LK*NFKFLNKPLQXXXXXXXXXXXXXXSTRFISAPGSLVGS*C*SCANLSSDS 919
K NF FL L S R I+APGSL GS*C*S A+LSSDS
Sbjct: 227 PKKNFIFLKSLLHSFVS*SSSFSHSAFSIRCINAPGSLEGS*C*S*ASLSSDS 69
>gb|DT516736.1|DT516736 WS02432.B21_E04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_E04 3', mRNA sequence
Length = 972
Score = 300 bits (649), Expect(2) = 2e-088
Identities = 112/141 (79%), Positives = 131/141 (92%)
Frame = +2 / -3
Query: 1040 CKGLFKNLKFYLSREVPRESLLFIIPAFGGTVSWEGEGAPFKEIDEDITHQIVDRPTQSH 1219
C+ LFKN+KF+L REVPRESLLF+IPAFGG VSW+GE AP+KE D+ ITHQIVDRPTQ H
Sbjct: 961 CRRLFKNMKFFLGREVPRESLLFVIPAFGGVVSWDGEAAPYKESDQSITHQIVDRPTQGH 782
Query: 1220 VFLSREYVQPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRL 1399
+LSREYVQPQW++DC+NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIKRL
Sbjct: 781 KYLSREYVQPQWIYDCINARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIKRL 602
Query: 1400 QAAARNEVLPLPGIGDEDLDN 1462
QAAA+NEVLP+PG+G EDLD+
Sbjct: 601 QAAAKNEVLPMPGVGKEDLDD 539
Score = 169 bits (363), Expect = 7e-041
Identities = 87/139 (62%), Positives = 91/139 (65%)
Frame = -1 / +3
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 543 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 722
Query: 1278 RAFTQSKTHCG*TYSLERKTWLCVGLXXXXXXXXXXXSLNGAPSPSHETVPPNAGIINNR 1099
RA QS HCG*TYSLER VGL SL GA SPS ET PP AGI +
Sbjct: 723 RALMQS*IHCG*TYSLERYL*PWVGLSTI**VMLWSDSLYGAASPSQETTPPKAGITKSN 902
Query: 1098 DSLGTSRLK*NFKFLNKPL 1042
DSLGTSR K NF FL L
Sbjct: 903 DSLGTSRPKKNFIFLKSLL 959
Score = 47.8 bits (98), Expect(2) = 2e-088
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / -3
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 544 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 413
>gb|BU867731.1|BU867731 M103F07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 669
Score = 306 bits (663), Expect = 3e-082
Identities = 122/183 (66%), Positives = 145/183 (79%)
Frame = +2 / +2
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR PKKK +GN+ TYYH KD
Sbjct: 119 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPRDPKKKFKGNNHTYYHVKD 298
Query: 182 IAFLAHDPLIEKFREIXXXXXXXXXXXXXXNRDLADRLLNRPPTYKLDRLVLERYPTFVD 361
+AFL H+PL++KFR+I N DLA L R PTYKLDRLV ER+P FVD
Sbjct: 299 VAFLQHEPLLDKFRDIRAYQKKIKKAEAKKNADLATLLRTREPTYKLDRLVRERFPKFVD 478
Query: 362 ALRDLDDCLTMVHLFAALPAVDGERVEVKRIHNCRRLSHEWQAYISRTHSLRKTFISVKG 541
ALRDLDDCLTMVHLFAALPAV+ +++V+ IHNCRRLSHEWQAY+SRT+ LRK FISVKG
Sbjct: 479 ALRDLDDCLTMVHLFAALPAVERAKIDVELIHNCRRLSHEWQAYVSRTYKLRKVFISVKG 658
Query: 542 IYY 550
IYY
Sbjct: 659 IYY 667
Score = 127 bits (272), Expect = 3e-028
Identities = 68/183 (37%), Positives = 105/183 (57%)
Frame = -3 / -3
Query: 550 IIYALHGNKCLPQRMGSGYVCLPFMA*PAAVMDSFDLNTFTVNSR*CRKQMHHCKAVIQV 371
IIYAL+GN+ LPQ + +G + LPFM +M F +N + SR*C K+MHH +IQV
Sbjct: 667 IIYALYGNENLPQFISTGNISLPFMTQSPTIMYEFHINFCPLYSR*CCKKMHHG*TIIQV 488
Query: 370 TKSINECWIPFKDKPIKLVSWWPIQQPVCKIPVFLSNSLFNLPSMDLNLPELLDQRVMSE 191
++ IN+ PF +KP+ LVS +P + KI V L S L + + +L++ R M +
Sbjct: 487 SQRINKLRKPFSNKPV*LVSGFPSSKKRGKISVLLGLSFLYLLLVSPYVSKLVE*RFMLK 308
Query: 190 ECNILCVVVGLVVPFHXXXXXXXXXXX*NA*LPKDCEANLQVVDRLGPRDVLCRIPFLLL 11
E NIL +++ +++ *NA* P+ +L++++ L P +V + FLLL
Sbjct: 307 ESNILDMIISMIISLELLLWVSREYTF*NA*PPEKT*RDLELLNSLRPGNVSGSVAFLLL 128
Query: 10 TRR 2
TRR
Sbjct: 127 TRR 119
Score = 109 bits (232), Expect(2) = 4e-038
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = -1 / -1
Query: 552 **YMPFTEINVFLREWVRDMYACHSWLNLRQLWIRLTSTRSPSTAGNAANRCTIVRQSSK 373
**YMPFTE+ FL VR+ ACHS LNL QL + TS + STAGNAA RCT+V+QSSK
Sbjct: 669 **YMPFTEMKTFLNL*VRET*ACHS*LNLLQLCMSSTSIFALSTAGNAAKRCTMVKQSSK 490
Query: 372 SRRASTNVGYLSRTSLSSL*VG 307
S ASTN+G LS TSLSSL*VG
Sbjct: 489 SLSASTNLGNLSLTSLSSL*VG 424
Score = 70.7 bits (148), Expect(2) = 4e-038
Identities = 40/76 (52%), Positives = 43/76 (56%)
Frame = -1 / -1
Query: 228 ISLNFSIKGS*ARNAISFVW**VLWFPSTFFFG*RGKTPFRMHSFLKIARLTCR*LTALV 49
+SLN S GS R A S **V FP FFFG RG PFRM + K +T L A
Sbjct: 345 MSLNLSSNGSC*RKATSLT***V*LFPLNFFFGSRGNIPFRMLNLRKKPSVTWSCLIA*D 166
Query: 48 LVMYFAAFPSFFLPAG 1
LV Y AA PSFFLP G
Sbjct: 165 LVTYLAALPSFFLPGG 118
>gb|CX176080.1|CX176080 A06_69-25_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 671
Score = 292 bits (632), Expect = 6e-078
Identities = 116/177 (65%), Positives = 140/177 (79%)
Frame = +2 / +1
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR+PKKK +GN+ TYYH KD
Sbjct: 139 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPREPKKKFKGNNHTYYHVKD 318
Query: 182 IAFLAHDPLIEKFREIXXXXXXXXXXXXXXNRDLADRLLNRPPTYKLDRLVLERYPTFVD 361
+AFL H+PL++KFR+I N DLA L R PTYKLDRLV ER+P FVD
Sbjct: 319 VAFLQHEPLLDKFRDIRAYQKKIKKAEAKKNADLATLLRTREPTYKLDRLVRERFPKFVD 498
Query: 362 ALRDLDDCLTMVHLFAALPAVDGERVEVKRIHNCRRLSHEWQAYISRTHSLRKTFIS 532
ALRDLDDCLTMVHLFAALPAV+ +++V+ IHNCRRLSHEWQAY+SRT+ LRK FIS
Sbjct: 499 ALRDLDDCLTMVHLFAALPAVERAKIDVELIHNCRRLSHEWQAYVSRTYKLRKVFIS 669
Score = 115 bits (245), Expect = 1e-024
Identities = 63/177 (35%), Positives = 99/177 (55%)
Frame = -3 / -3
Query: 532 GNKCLPQRMGSGYVCLPFMA*PAAVMDSFDLNTFTVNSR*CRKQMHHCKAVIQVTKSINE 353
GN+ LPQ + +G + LPFM +M F +N + SR*C K+MHH +IQV++ IN+
Sbjct: 669 GNENLPQFISTGNISLPFMTQSPTIMYEFHINFCPLYSR*CCKKMHHG*TIIQVSQRINK 490
Query: 352 CWIPFKDKPIKLVSWWPIQQPVCKIPVFLSNSLFNLPSMDLNLPELLDQRVMSEECNILC 173
PF +KP+ LVS +P + KI V L S L + + +L++ R M +E NIL
Sbjct: 489 LRKPFSNKPV*LVSGFPSSKKRGKISVLLGLSFLYLLLVSPYVSKLVE*RFMLKESNILD 310
Query: 172 VVVGLVVPFHXXXXXXXXXXX*NA*LPKDCEANLQVVDRLGPRDVLCRIPFLLLTRR 2
+++ +++ *NA* P+ +L++++ L P +V + FLLLTRR
Sbjct: 309 MIIRMIISLELLLWLSREYTF*NA*PPEKT*RDLELLNSLRPGNVSGSVAFLLLTRR 139
Score = 96.8 bits (205), Expect(2) = 1e-033
Identities = 49/76 (64%), Positives = 56/76 (73%)
Frame = -1 / -1
Query: 534 TEINVFLREWVRDMYACHSWLNLRQLWIRLTSTRSPSTAGNAANRCTIVRQSSKSRRAST 355
TE+ FL VR+ ACHS LNL QL + TS + STAGNAA RCT+V+QSSKS AST
Sbjct: 671 TEMKTFLNL*VRET*ACHS*LNLLQLCMSSTSIFALSTAGNAAKRCTMVKQSSKSLSAST 492
Query: 354 NVGYLSRTSLSSL*VG 307
N+G LS TSLSSL*VG
Sbjct: 491 NLGNLSLTSLSSL*VG 444
Score = 68.4 bits (143), Expect(2) = 1e-033
Identities = 39/76 (51%), Positives = 42/76 (55%)
Frame = -1 / -1
Query: 228 ISLNFSIKGS*ARNAISFVW**VLWFPSTFFFG*RGKTPFRMHSFLKIARLTCR*LTALV 49
+SLN S GS R A S * V FP FFFG RG PFRM + K +T L A
Sbjct: 365 MSLNLSSNGSC*RKATSLT**YV*LFPLNFFFGSRGNIPFRMLNLRKKPSVTWSCLIA*D 186
Query: 48 LVMYFAAFPSFFLPAG 1
LV Y AA PSFFLP G
Sbjct: 185 LVTYLAALPSFFLPGG 138
>gb|CV276979.1|CV276979 WS0142.B21_F07 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_F07 3', mRNA sequence
Length = 916
Score = 236 bits (510), Expect(3) = 5e-075
Identities = 87/109 (79%), Positives = 102/109 (93%)
Frame = +2 / -1
Query: 1136 SWEGEGAPFKEIDEDITHQIVDRPTQSHVFLSREYVQPQWVFDCVNARIILPTEGYLVGR 1315
SW+GE AP+KE D+ ITHQIVDRPTQ H +LSREYVQPQW++DC+NARIILPTE Y+VGR
Sbjct: 868 SWDGEAAPYKESDQSITHQIVDRPTQGHKYLSREYVQPQWIYDCINARIILPTEAYMVGR 689
Query: 1316 VPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEVLPLPGIGDEDLDN 1462
+PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+NEVLP+PG+G EDLD+
Sbjct: 688 IPPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKNEVLPMPGVGKEDLDD 542
Score = 130 bits (278), Expect(2) = 8e-032
Identities = 68/108 (62%), Positives = 71/108 (65%)
Frame = -1 / +3
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 546 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 725
Query: 1278 RAFTQSKTHCG*TYSLERKTWLCVGLXXXXXXXXXXXSLNGAPSPSHE 1135
RA QS HCG*TYSLER VGL SL GA SPS E
Sbjct: 726 RALMQS*IHCG*TYSLERYL*PWVGLSTI**VMLWSDSLYGAASPSQE 869
Score = 47.8 bits (98), Expect(3) = 5e-075
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / -1
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 547 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 416
Score = 38.2 bits (77), Expect(3) = 5e-075
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 1088 PRESLLFIIPAFGGTVSWEGE 1150
PRESLLF+IPAFGG V G+
Sbjct: 915 PRESLLFVIPAFGGVVLGTGK 853
Score = 28.6 bits (56), Expect(2) = 8e-032
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 1146 PSHETVPPNAGIINNRDSLG 1087
P T PP AGI + DSLG
Sbjct: 857 PVPRTTPPKAGITKSNDSLG 916
>gb|DT486867.1|DT486867 WS02532.B21_C11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_C11 3', mRNA sequence
Length = 913
Score = 234 bits (506), Expect(2) = 9e-069
Identities = 86/108 (79%), Positives = 101/108 (93%)
Frame = +2 / -3
Query: 1139 WEGEGAPFKEIDEDITHQIVDRPTQSHVFLSREYVQPQWVFDCVNARIILPTEGYLVGRV 1318
W+GE AP+KE D+ ITHQIVDRPTQ H +LSREYVQPQW++DC+NARIILPTE Y+VGR+
Sbjct: 911 WDGEAAPYKESDQSITHQIVDRPTQGHKYLSREYVQPQWIYDCINARIILPTEAYMVGRI 732
Query: 1319 PPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEVLPLPGIGDEDLDN 1462
PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+NEVLP+PG+G EDLD+
Sbjct: 731 PPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKNEVLPMPGVGKEDLDD 588
Score = 127 bits (273), Expect = 2e-028
Identities = 67/106 (63%), Positives = 70/106 (66%)
Frame = -1 / +1
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 592 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 771
Query: 1278 RAFTQSKTHCG*TYSLERKTWLCVGLXXXXXXXXXXXSLNGAPSPS 1141
RA QS HCG*TYSLER VGL SL GA SPS
Sbjct: 772 RALMQS*IHCG*TYSLERYL*PWVGLSTI**VMLWSDSLYGAASPS 909
Score = 47.8 bits (98), Expect(2) = 9e-069
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / -3
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 593 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 462
>gb|AJ774232.1|AJ774232 AJ774232 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300014E04F1, mRNA sequence
Length = 375
Score = 248 bits (535), Expect = 1e-064
Identities = 92/122 (75%), Positives = 111/122 (90%)
Frame = +2 / +1
Query: 1058 NLKFYLSREVPRESLLFIIPAFGGTVSWEGEGAPFKEIDEDITHQIVDRPTQSHVFLSRE 1237
++KF+L REVPRES+LF+IPAFGG VSW+GE P+KE D+ ITHQIVDRPTQ H +LSRE
Sbjct: 10 DMKFFLGREVPRESMLFVIPAFGGVVSWDGEAPPYKESDQSITHQIVDRPTQGHKYLSRE 189
Query: 1238 YVQPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARN 1417
YVQPQW++ C+NARIILPTE Y+VGR+PPP LSPFVDNDA+GY+P+YA+TIKRLQAAA+N
Sbjct: 190 YVQPQWIYHCINARIILPTEAYMVGRIPPPDLSPFVDNDAQGYIPDYAQTIKRLQAAAKN 369
Query: 1418 EV 1423
EV
Sbjct: 370 EV 375
Score = 133 bits (285), Expect = 4e-030
Identities = 72/120 (60%), Positives = 75/120 (62%)
Frame = -1 / -2
Query: 1422 TSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMIRAFTQSKTHCG* 1243
TS AAA IV A SG+*P ASLSTKGD+ GGG LPT * SVGNMIRA Q HCG*
Sbjct: 374 TSFLAAACKRLIVCA*SGI*PCASLSTKGDRSGGGILPTI*ASVGNMIRALMQW*IHCG* 195
Query: 1242 TYSLERKTWLCVGLXXXXXXXXXXXSLNGAPSPSHETVPPNAGIINNRDSLGTSRLK*NF 1063
TYSLER VGL SL G SPS ET PP AGI + DSLGTSR K NF
Sbjct: 194 TYSLERYL*PWVGLSTI**VMLWSDSLYGGASPSQETTPPKAGITKSIDSLGTSRPKKNF 15
>gb|CV232356.1|CV232356 WS0197.B21_F10 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0197_F10
3', mRNA sequence
Length = 800
Score = 183 bits (395), Expect(2) = 2e-053
Identities = 68/83 (81%), Positives = 79/83 (95%)
Frame = +2 / -2
Query: 1214 SHVFLSREYVQPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIK 1393
SH LSREYVQPQW++DC+NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIK
Sbjct: 787 SHKILSREYVQPQWIYDCINARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIK 608
Query: 1394 RLQAAARNEVLPLPGIGDEDLDN 1462
RLQAAA+NEVLP+PG+G EDLD+
Sbjct: 607 RLQAAAKNEVLPMPGVGKEDLDD 539
Score = 119 bits (255), Expect = 6e-026
Identities = 56/77 (72%), Positives = 59/77 (76%)
Frame = -1 / +3
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 543 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 722
Query: 1278 RAFTQSKTHCG*TYSLE 1228
RA QS HCG*TYSLE
Sbjct: 723 RALMQS*IHCG*TYSLE 773
Score = 47.8 bits (98), Expect(2) = 2e-053
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / -2
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 544 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 413
>gb|CK090585.1|CK090585 F014P37.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F014P37 3', mRNA sequence
Length = 808
Score = 171 bits (367), Expect(2) = 1e-049
Identities = 62/75 (82%), Positives = 73/75 (97%)
Frame = +2 / -3
Query: 1238 YVQPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARN 1417
YVQPQW++DC+NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+N
Sbjct: 806 YVQPQWIYDCINARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKN 627
Query: 1418 EVLPLPGIGDEDLDN 1462
EVLP+PG+G EDLD+
Sbjct: 626 EVLPMPGVGKEDLDD 582
Score = 113 bits (242), Expect = 3e-024
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = -1 / +1
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 586 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 765
Query: 1278 RAFTQSKTHCG*TY 1237
RA QS HCG*TY
Sbjct: 766 RALMQS*IHCG*TY 807
Score = 47.8 bits (98), Expect(2) = 1e-049
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / -3
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 587 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 456
>gb|CX174759.1|CX174759 F05_69-118_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 726
Score = 191 bits (411), Expect(2) = 7e-049
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = +2 / +3
Query: 1205 PTQSHVFLSREYVQPQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAE 1384
PTQ H +LSREYVQPQW++DC+NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAE
Sbjct: 30 PTQGHKYLSREYVQPQWIYDCINARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAE 209
Query: 1385 TIKRLQAAARNEVLPLPGIGDEDLDN 1462
TIKRLQAAA+NEVLP+PG+G EDLD+
Sbjct: 210 TIKRLQAAAKNEVLPMPGVGKEDLDD 287
Score = 122 bits (260), Expect = 1e-026
Identities = 57/78 (73%), Positives = 60/78 (76%)
Frame = -1 / -3
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P PG G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 283 SKSSFPTPGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 104
Query: 1278 RAFTQSKTHCG*TYSLER 1225
RA QS HCG*TYSLER
Sbjct: 103 RALMQS*IHCG*TYSLER 50
Score = 24.9 bits (48), Expect(2) = 7e-049
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3 / +1
Query: 1461 IHW*QQ*WIEQLLTKLLKRRGSWRC*RSNT 1550
I W + +EQ L +L ++R WR RS+T
Sbjct: 295 ICWLKVILVEQRLMRL*RQRKRWRLLRSST 384
>gb|DT495466.1|DT495466 WS01120.BR_I19 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01120_I19
5', mRNA sequence
Length = 785
Score = 160 bits (343), Expect(2) = 2e-046
Identities = 58/72 (80%), Positives = 69/72 (95%)
Frame = +2 / +3
Query: 1247 PQWVFDCVNARIILPTEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEVL 1426
PQW++DC+NARIILPTE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+NEVL
Sbjct: 3 PQWIYDCINARIILPTEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKNEVL 182
Query: 1427 PLPGIGDEDLDN 1462
P+P +G EDLD+
Sbjct: 183 PMPRVGKEDLDD 218
Score = 103 bits (219), Expect = 5e-021
Identities = 49/71 (69%), Positives = 52/71 (73%)
Frame = -1 / -2
Query: 1458 SRSSSPIPGRGNTSLRAAAWSLFIVSAYSGM*PSASLSTKGDKCGGGTLPTR*PSVGNMI 1279
S+SS P G G TS AAA IVSA SG+*PSASLSTKGD+CGGG LPT * SVGNMI
Sbjct: 214 SKSSFPTLGMGRTSFLAAACKRLIVSA*SGI*PSASLSTKGDRCGGGILPTI*ASVGNMI 35
Query: 1278 RAFTQSKTHCG 1246
RA QS HCG
Sbjct: 34 RALMQS*IHCG 2
Score = 47.8 bits (98), Expect(2) = 2e-046
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / +3
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 213 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 344
>gb|BI138264.1|BI138264 F102P26Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 512
Score = 65.2 bits (136), Expect(4) = 6e-038
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2 / +3
Query: 1112 IPAFGGTVSWEGEGAPFKEIDEDITHQIVDR 1204
IPAFGG VSW+GE AP+KE D+ ITHQIVDR
Sbjct: 414 IPAFGGVVSWDGEAAPYKESDQSITHQIVDR 506
Score = 62.5 bits (130), Expect(4) = 6e-038
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +2 / +1
Query: 911 KADESELRLAQLQHQLPTNEPGALMNLVEES 1003
+ADESELRLAQLQHQLP+NEPGALM+L+E +
Sbjct: 211 QADESELRLAQLQHQLPSNEPGALMHLMENA 303
Score = 50.6 bits (104), Expect(4) = 6e-038
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +2 / +2
Query: 1040 CKGLFKNLKFYLSREVPRESLLFIIPAF 1123
C+ LFKN+KF+L REVPRESLLF+ F
Sbjct: 341 CRRLFKNMKFFLGREVPRESLLFVNSCF 424
Score = 36.8 bits (74), Expect(4) = 6e-038
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = +3 / +2
Query: 699 IQ*M*IILLFWIHVWKL*LLSSMHCADTCLLVPE 800
+ *M* I LF I WKL* SM C DT L PE
Sbjct: 38 VS*M*SIHLFLIPSWKL*HQISMRCQDTLFLTPE 139
>gb|CV253767.1|CV253767 WS0222.B21_P01 PTxD-ICC-A-12 Populus trichocarpa x Populus deltoides
cDNA clone WS0222_P01 3', mRNA sequence
Length = 713
Score = 126 bits (270), Expect(2) = 2e-036
Identities = 47/57 (82%), Positives = 55/57 (96%)
Frame = +2 / -1
Query: 1292 TEGYLVGRVPPPHLSPFVDNDAEGYMPEYAETIKRLQAAARNEVLPLPGIGDEDLDN 1462
TE Y+VGR+PPPHLSPFVDNDAEGY+P+YAETIKRLQAAA+NEVLP+PG+G EDLD+
Sbjct: 713 TEAYMVGRIPPPHLSPFVDNDAEGYIPDYAETIKRLQAAAKNEVLPMPGVGKEDLDD 543
Score = 47.8 bits (98), Expect(2) = 2e-036
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2 / -1
Query: 1448 EDLDNSLVAAMMDRTASNEAAEKKRKLEMLEKQYIDELKKEIDG 1579
+D N LV + R +NEA + K+K+ LEKQY +EL++E+ G
Sbjct: 548 DDPQNLLVEGYISRAEANEAVKTKKKMATLEKQYHEELQRELQG 417
>gb|CV257906.1|CV257906 WS0247.B21_P16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0247_P16 3', mRNA sequence
Length = 344
Score = 137 bits (293), Expect = 3e-031
Identities = 50/76 (65%), Positives = 66/76 (86%)
Frame = +2 / -2
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR+PKKK +GN+ TYYH KD
Sbjct: 256 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPREPKKKFKGNNHTYYHVKD 77
Query: 182 IAFLAHDPLIEKFREI 229
+AFL H+PL++KFR+I
Sbjct: 76 VAFLQHEPLLDKFRDI 29
>gb|DT507993.1|DT507993 WS02419.BR_M09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_M09 5', mRNA sequence
Length = 818
Score = 137 bits (293), Expect = 3e-031
Identities = 50/76 (65%), Positives = 66/76 (86%)
Frame = +2 / -3
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR+PKKK +GN+ TYYH KD
Sbjct: 258 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPREPKKKFKGNNHTYYHVKD 79
Query: 182 IAFLAHDPLIEKFREI 229
+AFL H+PL++KFR+I
Sbjct: 78 VAFLQHEPLLDKFRDI 31
>gb|DT509671.1|DT509671 WS02424.BR_G01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_G01 5', mRNA sequence
Length = 386
Score = 137 bits (293), Expect = 3e-031
Identities = 50/76 (65%), Positives = 66/76 (86%)
Frame = +2 / +2
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR+PKKK +GN+ TYYH KD
Sbjct: 131 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPREPKKKFKGNNHTYYHVKD 310
Query: 182 IAFLAHDPLIEKFREI 229
+AFL H+PL++KFR+I
Sbjct: 311 VAFLQHEPLLDKFRDI 358
>gb|DT514277.1|DT514277 WS02424.B21_G01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_G01 3', mRNA sequence
Length = 386
Score = 137 bits (293), Expect = 3e-031
Identities = 50/76 (65%), Positives = 66/76 (86%)
Frame = +2 / -2
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR+PKKK +GN+ TYYH KD
Sbjct: 256 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPREPKKKFKGNNHTYYHVKD 77
Query: 182 IAFLAHDPLIEKFREI 229
+AFL H+PL++KFR+I
Sbjct: 76 VAFLQHEPLLDKFRDI 29
>gb|DT517392.1|DT517392 WS02434.B21_C23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_C23 3', mRNA sequence
Length = 385
Score = 137 bits (293), Expect = 3e-031
Identities = 50/76 (65%), Positives = 66/76 (86%)
Frame = +2 / -1
Query: 2 PAGKKKEGNAAKYITRTKAVNYLQVSLAIFRKLCILKGVFPRQPKKKVEGNHKTYYHTKD 181
P GKKKEGNAA+Y+TR++A+ LQV+L FR+L ILKG+FPR+PKKK +GN+ TYYH KD
Sbjct: 256 PPGKKKEGNAARYVTRSQAIKQLQVTLGFFRRLSILKGIFPREPKKKFKGNNHTYYHVKD 77
Query: 182 IAFLAHDPLIEKFREI 229
+AFL H+PL++KFR+I
Sbjct: 76 VAFLQHEPLLDKFRDI 29
>gb|BI120432.1|BI120432 F014P84Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 357
Score = 118 bits (253), Expect(2) = 3e-028
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = +2 / +3
Query: 911 KADESELRLAQLQHQLPTNEPGALMNLVEESXXXXXXXXXXXXCKGLFKNLKFYLSREVP 1090
+ADESELRLAQLQHQLP+NEPGALM+L+E + C+ LFKN+KF+L REVP
Sbjct: 102 QADESELRLAQLQHQLPSNEPGALMHLMENAECENEDDQDTKECRRLFKNMKFFLGREVP 281
Query: 1091 RESLLFIIPAFGG 1129
RESLLF+IPAFGG
Sbjct: 282 RESLLFVIPAFGG 320
Score = 28.1 bits (55), Expect(2) = 3e-028
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 1127 GTVSWEGEGAPFK 1165
G VSW+GE AP+K
Sbjct: 319 GFVSWDGEAAPYK 357
>gb|BI120283.1|BI120283 F013P01Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 313
Score = 110 bits (235), Expect = 3e-023
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +2 / +3
Query: 911 KADESELRLAQLQHQLPTNEPGALMNLVEESXXXXXXXXXXXXCKGLFKNLKFYLSREVP 1090
+ADESELRLAQLQHQLP+NEPGALM+L+E + C+ LFKN+KF+L REVP
Sbjct: 102 QADESELRLAQLQHQLPSNEPGALMHLMENAECENEDDQDTKECRRLFKNMKFFLGREVP 281
Query: 1091 RESLLFIIPA 1120
RESLLF+IPA
Sbjct: 282 RESLLFVIPA 311
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 921,904,534
Number of Sequences: 369679
Number of extensions: 12693041
Number of successful extensions: 51692
Number of sequences better than 1.0e-020: 24
length of database: 67,802,888
effective HSP length: 55
effective length of database: 47,470,543
effective search space used: 30855852950
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)