TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.1
(2055 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT517940.1|DT517940 WS02435.B21_L21 PTxD-ICC-N-A-14 Popu... 157 5e-086
gb|DT516146.1|DT516146 WS02430.B21_I16 PTxD-ICC-N-A-14 Popu... 149 8e-084
gb|DT514871.1|DT514871 WS02426.B21_A05 PTxD-ICC-N-A-14 Popu... 147 2e-077
gb|BU869595.1|BU869595 Q001H02 Populus flower cDNA library ... 192 3e-059
gb|CX169703.1|CX169703 E01_69-117_09.ab1 leaf inoculated wi... 149 6e-054
gb|BU871633.1|BU871633 Q032F11 Populus flower cDNA library ... 154 1e-053
gb|DT500159.1|DT500159 PX0011.BR_G11 PT-X-FL-A-1 Populus tr... 155 2e-053
gb|DN503017.1|DN503017 X051B06.5pR Populus wood cDNA librar... 127 2e-053
gb|BU879414.1|BU879414 V059H01 Populus flower cDNA library ... 192 3e-052
gb|CK320389.1|CK320389 L3P05d10 Populus stem seasonal libra... 151 4e-051
gb|BU820388.1|BU820388 UA54DPF07 Populus tremula cambium cD... 182 4e-051
gb|AY190017.1| Populus tomentosa cell-wall invertase gene, ... 128 7e-051
gb|BU897099.1|BU897099 X051B06 Populus wood cDNA library Po... 127 2e-050
gb|BU818306.1|BU818306 UA28DPE12 Populus tremula cambium cD... 137 1e-049
gb|CX654517.1|CX654517 PO02011E09 Poplar SC cDNA library Po... 195 9e-049
gb|BP922671.1|BP922671 BP922671 full-length enriched poplar... 98 4e-048
gb|CX168427.1|CX168427 B06_69-85_04.ab1 leaf inoculated wit... 149 2e-046
gb|CA934423.1|CA934423 MTU3TS.P7.D08 Aspen stem cDNA Librar... 100 2e-045
gb|DT509002.1|DT509002 WS02422.BR_I07 PTxD-ICC-N-A-14 Popul... 147 1e-044
gb|DT513609.1|DT513609 WS02422.B21_I07 PTxD-ICC-N-A-14 Popu... 147 1e-044
gb|AJ777184.1|AJ777184 AJ777184 Populus euphratica root 3-6... 100 2e-043
gb|AY391776.1| Populus alba x Populus tremula putative inve... 158 2e-042
gb|BU878522.1|BU878522 V048D07 Populus flower cDNA library ... 66 1e-039
gb|DN493003.1|DN493003 X051B06.3pR Populus wood cDNA librar... 123 1e-035
gb|BI128034.1|BI128034 G070P01Y Populus cambium cDNA librar... 100 1e-033
gb|CA933245.1|CA933245 MTU5CS.P5.E03 Aspen stem cDNA Librar... 73 7e-033
gb|CA933512.1|CA933512 MTU5CS.P9.A07 Aspen stem cDNA Librar... 73 7e-033
gb|CK106113.1|CK106113 UA54DPF07.5pR Populus dormant cambiu... 95 1e-031
gb|CA932912.1|CA932912 MTU5CS.P1.B01 Aspen stem cDNA Librar... 75 5e-029
gb|CK095793.1|CK095793 UA28DPE12.3pR Populus dormant cambiu... 83 1e-022
gb|BP923506.1|BP923506 BP923506 full-length enriched poplar... 57 2e-022
>gb|DT517940.1|DT517940 WS02435.B21_L21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_L21 3', mRNA sequence
Length = 904
Score = 157 bits (337), Expect(3) = 5e-086
Identities = 61/92 (66%), Positives = 73/92 (79%)
Frame = -1 / -2
Query: 1011 YDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRA 832
+DP+ RRILWGWANESD+ D KGWAGIQ IPR VWLDPSGKQLLQWP+ E+E LR+
Sbjct: 903 FDPSTNRRILWGWANESDSVQQDRNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRS 724
Query: 831 KSVTLRNRVIKAGHHVEVTGIQTAQADVEVSF 736
+V LRN+ + G+HVEV GI AQADV+V+F
Sbjct: 723 HNVQLRNQKLYQGYHVEVKGITAAQADVDVTF 628
Score = 147 bits (316), Expect(3) = 5e-086
Identities = 63/104 (60%), Positives = 75/104 (72%)
Frame = -1 / -2
Query: 546 AGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 367
A DK VL+C+D SSL LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 447 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 268
Query: 366 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 267 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 136
Score = 105 bits (224), Expect(3) = 4e-051
Identities = 52/91 (57%), Positives = 63/91 (69%)
Frame = +2 / +2
Query: 737 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIA 916
K+TSTSA A +P+TST* P FL T + LS S+S+ GHCS+CFPLGSSHT+LGI
Sbjct: 629 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TLWLLSFSSSATGHCSNCFPLGSSHTLLGIN 808
Query: 917 WIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1009
IPA PL S SDSLAQPH++ + GS
Sbjct: 809 *IPAHPLFLSCCTESDSLAQPHKILLFVLGS 901
Score = 93.6 bits (198), Expect(3) = 4e-051
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = +2 / +2
Query: 215 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 394
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 116 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 295
Query: 395 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLSPA 547
TT+ SI+LL S STNPA G Y +++L+ S H T LS A
Sbjct: 296 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 448
Score = 54.2 bits (112), Expect(3) = 5e-086
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / -2
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 573 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 442
Score = 42.8 bits (87), Expect(3) = 4e-051
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 545 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 637
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 440 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 532
>gb|DT516146.1|DT516146 WS02430.B21_I16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_I16 3', mRNA sequence
Length = 893
Score = 149 bits (321), Expect(3) = 8e-084
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = -1 / -2
Query: 993 RRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLR 814
RRILWGWANESD+ D KGWAGIQ IPR VWLDPSGKQLLQWP+ E+E LR+ +V LR
Sbjct: 883 RRILWGWANESDSVQQDRNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRSHNVQLR 704
Query: 813 NRVIKAGHHVEVTGIQTAQADVEVSF 736
N+ + G+HVEV GI AQADV+V+F
Sbjct: 703 NQKLYQGYHVEVKGITAAQADVDVTF 626
Score = 147 bits (316), Expect(3) = 8e-084
Identities = 63/104 (60%), Positives = 75/104 (72%)
Frame = -1 / -2
Query: 546 AGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 367
A DK VL+C+D SSL LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 445 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 266
Query: 366 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 265 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 134
Score = 104 bits (221), Expect(3) = 1e-050
Identities = 50/84 (59%), Positives = 60/84 (71%)
Frame = +2 / +3
Query: 737 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIA 916
K+TSTSA A +P+TST* P FL T + LS S+S+ GHCS+CFPLGSSHT+LGI
Sbjct: 627 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TLWLLSFSSSATGHCSNCFPLGSSHTLLGIN 806
Query: 917 WIPAQPLATSSAAVSDSLAQPHRM 988
IPA PL S SDSLAQPH++
Sbjct: 807 *IPAHPLFLSCCTESDSLAQPHKI 878
Score = 93.6 bits (198), Expect(3) = 1e-050
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = +2 / +3
Query: 215 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 394
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 114 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 293
Query: 395 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLSPA 547
TT+ SI+LL S STNPA G Y +++L+ S H T LS A
Sbjct: 294 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 446
Score = 54.2 bits (112), Expect(3) = 8e-084
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / -2
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 571 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 440
Score = 42.8 bits (87), Expect(3) = 1e-050
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 545 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 637
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 438 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 530
>gb|DT514871.1|DT514871 WS02426.B21_A05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_A05 3', mRNA sequence
Length = 857
Score = 147 bits (316), Expect(3) = 2e-077
Identities = 63/104 (60%), Positives = 75/104 (72%)
Frame = -1 / -1
Query: 546 AGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 367
A DK VL+C+D SSL LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 440 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 261
Query: 366 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 260 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 129
Score = 128 bits (275), Expect(3) = 2e-077
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = -1 / -1
Query: 972 ANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAG 793
ANESD+ D KGWAGIQ IPR VWLDPSGKQLLQWP+ E+E LR+ +V LRN+ + G
Sbjct: 857 ANESDSVQQDRNKGWAGIQLIPRRVWLDPSGKQLLQWPVAELEKLRSHNVQLRNQKLYQG 678
Query: 792 HHVEVTGIQTAQADVEVSF 736
+HVEV GI AQADV+V+F
Sbjct: 677 YHVEVKGITAAQADVDVTF 621
Score = 93.6 bits (198), Expect(3) = 5e-047
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = +2 / +1
Query: 215 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 394
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 109 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 288
Query: 395 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLSPA 547
TT+ SI+LL S STNPA G Y +++L+ S H T LS A
Sbjct: 289 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 441
Score = 91.8 bits (194), Expect(3) = 5e-047
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +2 / +1
Query: 737 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIA 916
K+TSTSA A +P+TST* P FL T + LS S+S+ GHCS+CFPLGSSHT+LGI
Sbjct: 622 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TLWLLSFSSSATGHCSNCFPLGSSHTLLGIN 801
Query: 917 WIPAQPLATSSAAVSDSL 970
IPA PL S SDSL
Sbjct: 802 *IPAHPLFLSCCTESDSL 855
Score = 54.2 bits (112), Expect(3) = 2e-077
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / -1
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 566 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 435
Score = 42.8 bits (87), Expect(3) = 5e-047
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 545 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 637
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 433 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 525
>gb|BU869595.1|BU869595 Q001H02 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 608
Score = 192 bits (413), Expect(3) = 3e-059
Identities = 71/89 (79%), Positives = 78/89 (87%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW
Sbjct: 194 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINW 373
Query: 1683 VALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+LEPA+ PS D YGCWSGSAT+LP+G
Sbjct: 374 ESLEPAIYPSKWFDSYGCWSGSATILPNG 460
Score = 118 bits (252), Expect(2) = 5e-030
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P G VA+PDQ P LS + G AGS +QL++S +TE A TMLPHTAPLGLYW* +W
Sbjct: 459 PFGRIVAEPDQHP*LSNHLEG*IAGSRDSQLIKSFETE*AQTMLPHTAPLGLYW*NRW*S 280
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVL 1849
PL*Y+GA GSLIQFL G K YPVL
Sbjct: 279 PL*YIGAFGSLIQFLRG*K*YPVL 208
Score = 55.1 bits (114), Expect(3) = 3e-059
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = -1 / +2
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPE 1453
N Q++N A P N+SDP LREWVKP NP++ P+
Sbjct: 500 NSQIQNYAVPANMSDPYLREWVKPDDNPILNPD 598
Score = 34.5 bits (69), Expect(2) = 5e-030
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +2 / -3
Query: 1454 SGTMTGLCEGFTHSRSSGSDTFFGYATF 1537
SG GL G THSR GSD F G A F
Sbjct: 597 SGFSIGLSSGLTHSRRYGSDMFAGTA*F 514
Score = 22.1 bits (42), Expect(3) = 3e-059
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGV 1567
G PVI+YTG+
Sbjct: 458 GEPVILYTGI 487
>gb|CX169703.1|CX169703 E01_69-117_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 716
Score = 149 bits (320), Expect(2) = 6e-054
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -1 / +2
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 1669
RT YHFQP KNW+NDP+ P+++KGWYH FYQYNP AVWGNI W H+VS DLI+W+ L
Sbjct: 197 RTAYHFQPEKNWMNDPDGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDLIHWLYLPF 376
Query: 1668 ALRPSIPGDRYGCWSGSATVLPDG 1597
A+ P D G W+GSAT+LPDG
Sbjct: 377 AMVPDHWYDINGVWTGSATLLPDG 448
Score = 99.1 bits (210), Expect(2) = 2e-027
Identities = 45/84 (53%), Positives = 51/84 (60%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG +VADP P++S G A +Q +RS DT H MLPHTA GLYW* +WYH
Sbjct: 447 PSGRSVADPVHTPFISYQ*SGTMANGR*SQ*IRSVDTAWPHVMLPHTAESGLYW*NRWYH 268
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVL 1849
PL* G GS IQF G KW VL
Sbjct: 267 PL*NNGPSGSFIQFFSG*KW*AVL 196
Score = 83.5 bits (176), Expect(2) = 6e-054
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = -1 / +2
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGP 1399
QV+N+AYP N+SDPLL +WVK +NPVI P G +FRDPTTAW GP
Sbjct: 491 QVQNLAYPANLSDPLLIDWVKYPNNPVITPPNGTETDEFRDPTTAWMGP 637
Score = 45.1 bits (92), Expect(2) = 2e-027
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +2 / -3
Query: 1400 GPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRT 1543
GP AVVGS N +P G +TGL T S GSD GYA F T
Sbjct: 636 GPIHAVVGSLNSSVSVPFGGVITGLLGYLTQSIRRGSDRLAGYARFWT 493
>gb|BU871633.1|BU871633 Q032F11 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 589
Score = 154 bits (330), Expect(4) = 1e-053
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW
Sbjct: 194 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINW 373
Query: 1683 VALEPA 1666
+LEPA
Sbjct: 374 ESLEPA 391
Score = 99.1 bits (210), Expect(2) = 2e-022
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +2 / -2
Query: 1661 LSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWY 1840
+ AGS +QL++S +TE A TMLPHTAPLGLYW* +W PL*Y+GA GSLIQFL G K Y
Sbjct: 396 VDAGSRDSQLIKSFETE*AQTMLPHTAPLGLYW*NRW*SPL*YIGAFGSLIQFLRG*K*Y 217
Query: 1841 PVL 1849
PVL
Sbjct: 216 PVL 208
Score = 51.0 bits (105), Expect(4) = 1e-053
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVI 1462
N Q +N A P N+SDP LREWVKP NP++
Sbjct: 499 NSQTQNYAVPANMSDPYLREWVKPDDNPIL 588
Score = 40.9 bits (83), Expect(4) = 1e-053
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / +1
Query: 1659 PSIPGDRYGCWSGSATVLPDG 1597
PS D YGCWSGSAT+LP+G
Sbjct: 397 PSKWFDSYGCWSGSATILPNG 459
Score = 31.8 bits (63), Expect(2) = 2e-022
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 1469 GLCEGFTHSRSSGSDTFFGYATF 1537
GL G THSR GSD F G A F
Sbjct: 581 GLSSGLTHSRRYGSDMFAGTA*F 513
Score = 22.1 bits (42), Expect(4) = 1e-053
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGV 1567
G PVI+YTG+
Sbjct: 457 GEPVILYTGI 486
>gb|DT500159.1|DT500159 PX0011.BR_G11 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_G11
5', mRNA sequence
Length = 673
Score = 155 bits (334), Expect(2) = 2e-053
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 1669
RT +HFQP +NW+NDPN P+YYKGWYHFFYQYNP AVWG+IVW H+VS+DLI+W+ L
Sbjct: 142 RTAFHFQPEENWMNDPNGPLYYKGWYHFFYQYNPHAAVWGDIVWGHAVSKDLIHWLHLPL 321
Query: 1668 ALRPSIPGDRYGCWSGSATVLPDG 1597
A+ D+ G W+GSAT+LPDG
Sbjct: 322 AMVADKWYDKNGVWTGSATILPDG 393
Score = 102 bits (217), Expect(2) = 4e-031
Identities = 46/84 (54%), Positives = 52/84 (61%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+P Q P+LS + A +Q ++S DT TM PHTA GLYW*KKWY
Sbjct: 392 PSGRIVAEPVQTPFLSYHLSATIANGRWSQWIKSFDTAWPQTMSPHTAACGLYW*KKWYQ 213
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVL 1849
PL*Y G LGS IQF G KW VL
Sbjct: 212 PL*YNGPLGSFIQFSSG*KWKAVL 141
Score = 75.3 bits (158), Expect(2) = 2e-053
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWR 1405
QV+N+AYP + DPLL +WVK S NPV+VP GI FRDPTTAW+
Sbjct: 436 QVQNLAYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 576
Score = 54.2 bits (112), Expect(2) = 4e-031
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = +2 / -3
Query: 1409 QAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
QAVVGSR + +P GT TGL E TH R GS GYA F TW
Sbjct: 572 QAVVGSRKSLAPIPGGGTKTGLPEYLTHLRRRGSSWSAGYARFCTW 435
>gb|DN503017.1|DN503017 X051B06.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X051B06 5', mRNA sequence
Length = 608
Score = 127 bits (271), Expect(3) = 2e-053
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = -1 / +2
Query: 984 LWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRV 805
+WGW NESD+ DD+ KGW+G+Q+IPR +WLD SGKQL+QWPIEE+ L K V+ ++
Sbjct: 5 IWGWVNESDSIEDDMDKGWSGLQSIPRHIWLDRSGKQLVQWPIEEINKLHGKKVSFLDKK 184
Query: 804 IKAGHHVEVTGIQTAQADVEVSFEV 730
I VEV GI AQADVEV FE+
Sbjct: 185 IDGESIVEVQGITAAQADVEVVFEL 259
Score = 84.5 bits (178), Expect(3) = 3e-025
Identities = 41/83 (49%), Positives = 51/83 (61%)
Frame = +2 / -3
Query: 734 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGI 913
SK TSTSACA +P TST I L ++T S SS+GHC++CFPL S+ LGI
Sbjct: 255 SKTTSTSACAAVMP*TSTIDSPSIFLSRKLTFLPCSLLISSMGHCTNCFPLLSNQMCLGI 76
Query: 914 AWIPAQPLATSSAAVSDSLAQPH 982
P PL+ SS+ +SDS QPH
Sbjct: 75 D*SPDHPLSMSSSMLSDSFTQPH 7
Score = 65.7 bits (137), Expect(3) = 2e-053
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = -1 / +2
Query: 531 VVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 370
VVLMC+D ++S+L + + T+ F+D D ISLRSLID S++ESFG G+
Sbjct: 443 VVLMCSDQSRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIESFGGEGR 604
Score = 57.0 bits (118), Expect(3) = 2e-053
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = -1 / +2
Query: 684 AYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 541
A D ++LC A ++G +GPFGL LA+ + E+TA+FFR+FK G
Sbjct: 296 AVDPQQLCSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKG 439
Score = 38.2 bits (77), Expect(3) = 3e-025
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +2 / -3
Query: 371 LPPAPKLSTTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTT 532
LP PKLS + SI+LL +I S+S V R DL+ S+HMSTT
Sbjct: 603 LPSPPKLSIME*SIKLLNEIFSR*GSISMKAPYVVLSTSSRRADLL*SLHMSTT 442
Score = 31.8 bits (63), Expect(3) = 3e-025
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSA 649
P LN K AV S++ A + PNGP PL A
Sbjct: 438 PFRPLNIRKKIAVCSVKSFVAKVNKPNGPNLPLIDA 331
>gb|BU879414.1|BU879414 V059H01 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 600
Score = 192 bits (413), Expect(2) = 3e-052
Identities = 69/84 (82%), Positives = 75/84 (89%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 1669
RTGYHFQPPKNWINDPN P+YYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW +LEP
Sbjct: 235 RTGYHFQPPKNWINDPNGPLYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWESLEP 414
Query: 1668 ALRPSIPGDRYGCWSGSATVLPDG 1597
A+ PS D YGCWSGSAT+LP+G
Sbjct: 415 AIYPSKWFDNYGCWSGSATILPNG 486
Score = 132 bits (283), Expect(2) = 6e-032
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P G VADPDQ P LS + G AGS +QL++S +TE A TMLPHTAPLGLYW* +WY
Sbjct: 485 PFGRIVADPDQHP*LSNHLEG*IAGSRDSQLIKSFETE*AQTMLPHTAPLGLYW*NRWYS 306
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVL 1849
PL*Y G GSLIQFLGGWK YPVL
Sbjct: 305 PL*YKGPFGSLIQFLGGWK*YPVL 234
Score = 35.4 bits (71), Expect(2) = 3e-052
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1 / +2
Query: 1539 RNVAYPKNVSDPLLREWVKP 1480
+ A P N SDP LREWVKP
Sbjct: 539 KTYAVPANSSDPYLREWVKP 598
Score = 26.7 bits (52), Expect(2) = 6e-032
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 1481 GFTHSRSSGSDTFFGYA 1531
G THSR GSD F G A
Sbjct: 597 GLTHSRRYGSDEFAGTA 547
>gb|CK320389.1|CK320389 L3P05d10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 832
Score = 151 bits (324), Expect(3) = 4e-051
Identities = 63/104 (60%), Positives = 77/104 (74%)
Frame = -1 / +2
Query: 546 AGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 367
A DK VL+C+D SSL LY+P+FAGFVD D+++ K+SLRSLID SVVESFGAGG+T
Sbjct: 338 AVDKHKVLLCSDARSSSLGEGLYKPSFAGFVDVDLTDKKLSLRSLIDHSVVESFGAGGRT 517
Query: 366 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
I SRVYP++A+ + A LYVFNNG + V L AW M PVMN
Sbjct: 518 AITSRVYPTIAVFEKAHLYVFNNGSETITVENLNAWSMNLPVMN 649
Score = 95.0 bits (201), Expect(3) = 2e-028
Identities = 52/104 (50%), Positives = 64/104 (61%)
Frame = +2 / -2
Query: 236 FMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIR 415
F+TG FI A+R T+ +LPLLNT + A A G*TL+ M VLPPAPKLSTT+ SI+
Sbjct: 648 FITGKFILQALRFSTVMVSLPLLNTYK*AFSKTAIVG*TLDVMAVLPPAPKLSTTE*SIK 469
Query: 416 LLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLSPA 547
LL + S STNPA G Y R++L+ S H T LS A
Sbjct: 468 LLSESFLSVKSTSTNPAKDGLYSPSPREELLASEHKRTLCLSTA 337
Score = 50.1 bits (103), Expect(3) = 4e-051
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -1 / +2
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFK 553
DA +C K + G+GPFGL LAS N +E T VFF+VFK
Sbjct: 212 DALDVCAQKGSKAPSGLGPFGLLTLASENLEEFTPVFFKVFK 337
Score = 42.3 bits (86), Expect(3) = 2e-028
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / -2
Query: 545 AAGLNTLKNTAVLSLRLAEASTHSPNGPTP 634
+ LNTLK T V S R +EA+ SPNGP+P
Sbjct: 345 STALNTLKKTGVNSSRFSEANVKSPNGPSP 256
Score = 40.5 bits (82), Expect(3) = 4e-051
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -1 / +2
Query: 849 VEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSF 736
+E LR +V L + + G+ VEV GI AQADV+V+F
Sbjct: 44 LEKLRGHNVQLTFQKLNQGYQVEVKGITAAQADVDVTF 157
Score = 28.1 bits (55), Expect(3) = 2e-028
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 737 KLTSTSACAVCIPVTST*CPAL 802
K+TSTSA A +P+TST* P L
Sbjct: 156 KVTSTSA*AAVMPLTST**PWL 91
>gb|BU820388.1|BU820388 UA54DPF07 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 562
Score = 182 bits (392), Expect(3) = 4e-051
Identities = 67/85 (78%), Positives = 74/85 (87%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINW 1684
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPKGAVWGNIVWAHSV++DLINW
Sbjct: 194 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKGAVWGNIVWAHSVTKDLINW 373
Query: 1683 VALEPALRPSIPGDRYGCWSGSATV 1609
+LEPA+ PS D YGCWSGSAT+
Sbjct: 374 ESLEPAIYPSKWFDSYGCWSGSATI 448
Score = 113 bits (241), Expect(2) = 5e-025
Identities = 53/79 (67%), Positives = 59/79 (74%)
Frame = +2 / -2
Query: 1613 VADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYHPL*YM 1792
VA+PDQ P LS + G AGS +QL+RS TE A TMLPHTAPLGLYW* +W PL*Y+
Sbjct: 444 VAEPDQHP*LSNHLEG*IAGSRDSQLIRSFVTE*AQTMLPHTAPLGLYW*NRW*SPL*YI 265
Query: 1793 GALGSLIQFLGGWKWYPVL 1849
GA GSLIQFL G K YPVL
Sbjct: 264 GAFGSLIQFLRG*K*YPVL 208
Score = 37.3 bits (75), Expect(3) = 4e-051
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREW 1489
N Q++N A P N+SDP LREW
Sbjct: 499 NSQIQNYAVPANMSDPYLREW 561
Score = 22.6 bits (43), Expect(2) = 5e-025
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2 / -3
Query: 1490 HSRSSGSDTFFGYATF 1537
HSR GSD F G A F
Sbjct: 560 HSRRYGSDMFAGTA*F 513
Score = 22.1 bits (42), Expect(3) = 4e-051
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGV 1567
G PVI+YTG+
Sbjct: 457 GEPVILYTGI 486
>gb|AY190017.1| Populus tomentosa cell-wall invertase gene, partial cds
Length = 518
Score = 128 bits (274), Expect(4) = 7e-051
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = -1 / +1
Query: 1773 YHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
YH FYQYNPKGAVWGNIVWAHSVS+DLINW +LEPA+ PS D YGCWSGSAT+LP+G
Sbjct: 1 YHLFYQYNPKGAVWGNIVWAHSVSKDLINWESLEPAIYPSKWFDNYGCWSGSATILPNG 177
Score = 85.8 bits (181), Expect(2) = 4e-025
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKW 1771
P G VADPDQ P LS + G AGS +QL++S DTE A TMLPHTAPLGLYW* +W
Sbjct: 176 PFGRIVADPDQHP*LSNHLEG*IAGSRDSQLIKSFDTEWAQTMLPHTAPLGLYW*NRW 3
Score = 83.5 bits (176), Expect(4) = 7e-051
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
N Q++N A P N SDP LREWVKP NP++ P+ +N + FRDPTTAWR G
Sbjct: 217 NRQIQNYAVPANSSDPYLREWVKPDDNPIVYPDPSVNASAFRDPTTAWRVGG 372
Score = 50.6 bits (104), Expect(2) = 4e-025
Identities = 25/47 (53%), Positives = 26/47 (55%)
Frame = +2 / -1
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 1537
P QAVVGSRN + SG GL G THSR GSD F G A F
Sbjct: 371 PPTLQAVVGSRNALAFTLGSGYTIGLSSGLTHSRRYGSDEFAGTA*F 231
Score = 24.0 bits (46), Expect(4) = 7e-051
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 1266 TGMWECPDF 1240
TGM ECPDF
Sbjct: 490 TGMVECPDF 516
Score = 23.1 bits (44), Expect(4) = 7e-051
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -1 / +1
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHS 1273
RG+AY+Y PLHS
Sbjct: 409 RGIAYLYRSLDFKKWFKAKHPLHS 480
>gb|BU897099.1|BU897099 X051B06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 585
Score = 127 bits (271), Expect(3) = 2e-050
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = -1 / +3
Query: 984 LWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRV 805
+WGW NESD+ DD+ KGW+G+Q+IPR +WLD SGKQL+QWPIEE+ L K V+ ++
Sbjct: 6 IWGWVNESDSIEDDMDKGWSGLQSIPRHIWLDRSGKQLVQWPIEEINKLHGKKVSFLDKK 185
Query: 804 IKAGHHVEVTGIQTAQADVEVSFEV 730
I VEV GI AQADVEV FE+
Sbjct: 186 IDGESIVEVQGITAAQADVEVVFEL 260
Score = 84.5 bits (178), Expect(3) = 7e-022
Identities = 41/83 (49%), Positives = 51/83 (61%)
Frame = +2 / -3
Query: 734 SKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGI 913
SK TSTSACA +P TST I L ++T S SS+GHC++CFPL S+ LGI
Sbjct: 256 SKTTSTSACAAVMP*TSTIDSPSIFLSRKLTFLPCSLLISSMGHCTNCFPLLSNQMCLGI 77
Query: 914 AWIPAQPLATSSAAVSDSLAQPH 982
P PL+ SS+ +SDS QPH
Sbjct: 76 D*SPDHPLSMSSSMLSDSFTQPH 8
Score = 57.0 bits (118), Expect(3) = 2e-050
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = -1 / +3
Query: 684 AYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 541
A D ++LC A ++G +GPFGL LA+ + E+TA+FFR+FK G
Sbjct: 297 AVDPQQLCSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKG 440
Score = 55.6 bits (115), Expect(3) = 2e-050
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = -1 / +3
Query: 531 VVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVE 391
VVLMC+D ++S+L + + T+ F+D D ISLRSLID S++E
Sbjct: 444 VVLMCSDQSRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIE 584
Score = 31.8 bits (63), Expect(3) = 7e-022
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSA 649
P LN K AV S++ A + PNGP PL A
Sbjct: 439 PFRPLNIRKKIAVCSVKSFVAKVNKPNGPNLPLIDA 332
Score = 26.7 bits (52), Expect(3) = 7e-022
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2 / -3
Query: 407 SIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTT 532
SI+LL +I S+S V R DL+ S+HMSTT
Sbjct: 568 SIKLLNEIFSR*GSISMKAPYVVLSTSSRRADLL*SLHMSTT 443
>gb|BU818306.1|BU818306 UA28DPE12 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 450
Score = 137 bits (294), Expect(3) = 1e-049
Identities = 51/66 (77%), Positives = 54/66 (81%)
Frame = -1 / +2
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 874
LR DYGNFYASKTF+DP+ RRILWGWANESD D KGWAGI IPR VWLDPSGKQ
Sbjct: 251 LRLDYGNFYASKTFFDPSTNRRILWGWANESDAVQQDTNKGWAGILLIPRKVWLDPSGKQ 430
Query: 873 LLQWPI 856
LLQWP+
Sbjct: 431 LLQWPV 448
Score = 59.3 bits (123), Expect(3) = 1e-049
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = -1 / +2
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 1075
G VKH LK SLDL RY+YYT+GTY + E+Y PD+
Sbjct: 119 GQNVKHALKVSLDLTRYEYYTLGTYDNKKEKYFPDE 226
Score = 40.0 bits (81), Expect(3) = 1e-049
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1 / +2
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWECPDF+PVS G
Sbjct: 44 TGMWECPDFFPVSSFG 91
>gb|CX654517.1|CX654517 PO02011E09 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02011E09 5', mRNA sequence
Length = 426
Score = 195 bits (420), Expect = 9e-049
Identities = 75/106 (70%), Positives = 88/106 (83%)
Frame = -1 / +3
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQ 874
LRYDYGNFYASKTF+DP+K RRILWGWANESD+ D+ KGWAGIQ IPR VWLDPSGKQ
Sbjct: 27 LRYDYGNFYASKTFFDPSKNRRILWGWANESDSVQQDMNKGWAGIQLIPRRVWLDPSGKQ 206
Query: 873 LLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSF 736
LLQWP+ E+E R+ +V LRN+ + G+HVEV GI AQADV+V+F
Sbjct: 207 LLQWPVAELEKXRSHNVQLRNQKLYQGYHVEVKGITAAQADVDVTF 344
Score = 116 bits (247), Expect = 7e-025
Identities = 59/101 (58%), Positives = 69/101 (68%)
Frame = +2 / -3
Query: 737 KLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIA 916
K+TSTSA A +P+TST* P FL T L S+S+ GHCS+CFPLGSSHT+LGI
Sbjct: 343 KVTSTSA*AAVMPLTST*YPW*SF*FLS*TL*LLXFSSSATGHCSNCFPLGSSHTLLGIN 164
Query: 917 WIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IPA PL S SDSLAQPH++ L GS NVL+A*K P
Sbjct: 163 *IPAHPLFMSCCTESDSLAQPHKILLFLLGSKNVLEA*KFP 41
>gb|BP922671.1|BP922671 BP922671 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-010_G04.f 5', mRNA sequence
Length = 640
Score = 98.2 bits (208), Expect(5) = 4e-048
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = -1 / +3
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV D
Sbjct: 438 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVWD 602
Score = 57.0 bits (118), Expect(5) = 4e-048
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / +3
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 306 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 425
Score = 54.7 bits (113), Expect(5) = 4e-048
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / +3
Query: 1503 LLREWVKPSHNPVIVPEGGINVTQFRDPTTAWR 1405
LL +WVK S NPV+VP GI FRDPTTAW+
Sbjct: 3 LLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 101
Score = 40.5 bits (82), Expect(5) = 4e-048
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / +3
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 231 TGMWECVDFYPVSKTG 278
Score = 25.8 bits (50), Expect(5) = 4e-048
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 900 VWLDPSGKQLLQWPI 856
VW +G LLQWP+
Sbjct: 594 VWDTKTGSNLLQWPV 638
>gb|CX168427.1|CX168427 B06_69-85_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 592
Score = 149 bits (320), Expect(2) = 2e-046
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -1 / +2
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 1669
RT YHFQP KNW+NDP+ P+++KGWYH FYQYNP AVWGNI W H+VS DLI+W+ L
Sbjct: 182 RTAYHFQPEKNWMNDPDGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDLIHWLYLPF 361
Query: 1668 ALRPSIPGDRYGCWSGSATVLPDG 1597
A+ P D G W+GSAT+LPDG
Sbjct: 362 AMVPDHWYDINGVWTGSATLLPDG 433
Score = 99.1 bits (210), Expect(2) = 2e-023
Identities = 45/84 (53%), Positives = 51/84 (60%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG +VADP P++S G A +Q +RS DT H MLPHTA GLYW* +WYH
Sbjct: 432 PSGRSVADPVHTPFISYQ*SGTMANGR*SQ*IRSVDTAWPHVMLPHTAESGLYW*NRWYH 253
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVL 1849
PL* G GS IQF G KW VL
Sbjct: 252 PL*NNGPSGSFIQFFSG*KW*AVL 181
Score = 58.3 bits (121), Expect(2) = 2e-046
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -1 / +2
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQF 1429
QV+N+AYP N+SDPLL +WVK +NPVI P G +F
Sbjct: 476 QVQNLAYPANLSDPLLIDWVKYPNNPVITPPNGTETDEF 592
Score = 31.3 bits (62), Expect(2) = 2e-023
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2 / -2
Query: 1430 NCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRT 1543
N +P G +TGL T S GSD GYA F T
Sbjct: 591 NSSVSVPFGGVITGLLGYLTQSIRRGSDRLAGYARFWT 478
>gb|CA934423.1|CA934423 MTU3TS.P7.D08 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 578
Score = 100 bits (214), Expect(4) = 2e-045
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = -1 / -3
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 270 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 106
Score = 57.0 bits (118), Expect(4) = 2e-045
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / -3
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 402 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 283
Score = 42.3 bits (86), Expect(4) = 2e-045
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1 / -3
Query: 885 SGKQLLQWPIEEVEALRAKSVTLRNRVIKAG 793
+G LLQWP+EEVE+LR K + +KAG
Sbjct: 99 TGSNLLQWPVEEVESLRLKGKNFNDIEVKAG 7
Score = 40.5 bits (82), Expect(4) = 2e-045
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / -3
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 477 TGMWECVDFYPVSKTG 430
>gb|DT509002.1|DT509002 WS02422.BR_I07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I07 5', mRNA sequence
Length = 634
Score = 147 bits (316), Expect(2) = 1e-044
Identities = 63/104 (60%), Positives = 75/104 (72%)
Frame = -1 / +2
Query: 546 AGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 367
A DK VL+C+D SSL LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 200 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 379
Query: 366 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 380 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 511
Score = 93.6 bits (198), Expect(2) = 4e-025
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = +2 / -2
Query: 215 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 394
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 531 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 352
Query: 395 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLSPA 547
TT+ SI+LL S STNPA G Y +++L+ S H T LS A
Sbjct: 351 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 199
Score = 54.2 bits (112), Expect(2) = 1e-044
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / +2
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 74 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 205
Score = 42.8 bits (87), Expect(2) = 4e-025
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / -2
Query: 545 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 637
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 207 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 115
>gb|DT513609.1|DT513609 WS02422.B21_I07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I07 3', mRNA sequence
Length = 634
Score = 147 bits (316), Expect(2) = 1e-044
Identities = 63/104 (60%), Positives = 75/104 (72%)
Frame = -1 / -2
Query: 546 AGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKT 367
A DK VL+C+D SSL LY+P FAGFVD D+++ K++LRSLID SVVESFGAGG+T
Sbjct: 435 AADKHKVLLCSDARSSSLGVGLYKPPFAGFVDVDLTDKKLTLRSLIDHSVVESFGAGGRT 256
Query: 366 CILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
I SRVYP +A+ A L+VFNNG V V L AW MK PVMN
Sbjct: 255 VITSRVYPIIAVFDKAHLFVFNNGSETVTVETLNAWSMKVPVMN 124
Score = 93.6 bits (198), Expect(2) = 4e-025
Identities = 52/111 (46%), Positives = 66/111 (59%)
Frame = +2 / +2
Query: 215 IQDLQAPFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLS 394
+Q F+TG F+ A+R T+T +LPLLNT + A A G*TL+ M VLPPAPKLS
Sbjct: 104 VQLFTGTFITGTFMLQALRVSTVTVSLPLLNTNK*ALSKTAMIG*TLDVMTVLPPAPKLS 283
Query: 395 TTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLSPA 547
TT+ SI+LL S STNPA G Y +++L+ S H T LS A
Sbjct: 284 TTE*SIKLLSVSFLSVKSTSTNPAKGGLYSPTPKEELLASEHKRTLCLSAA 436
Score = 54.2 bits (112), Expect(2) = 1e-044
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1 / -2
Query: 678 DAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
DA +C K + +GG+GPFGL LAS +E T VFFRVFK A
Sbjct: 561 DALDVCAQKGSKAQGGLGPFGLLTLASEKLEEFTPVFFRVFKAA 430
Score = 42.8 bits (87), Expect(2) = 4e-025
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 545 AAGLNTLKNTAVLSLRLAEASTHSPNGPTPP 637
+A L TLK T V S +EA+ +SPNGP+PP
Sbjct: 428 SAALKTLKKTGVNSSSFSEANVNSPNGPSPP 520
>gb|AJ777184.1|AJ777184 AJ777184 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400024D02F1, mRNA sequence
Length = 580
Score = 100 bits (214), Expect(4) = 2e-043
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = -1 / +1
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 415 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 579
Score = 57.0 bits (118), Expect(4) = 2e-043
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / +1
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 283 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 402
Score = 42.8 bits (87), Expect(4) = 2e-043
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -1 / +1
Query: 1482 PSHNPVIVPEGGINVTQFRDPTTAWR 1405
P+ PV+VP GI FRDPTTAW+
Sbjct: 1 PTRPPVLVPPPGIGAKDFRDPTTAWK 78
Score = 40.5 bits (82), Expect(4) = 2e-043
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 208 TGMWECVDFYPVSKTG 255
>gb|AY391776.1| Populus alba x Populus tremula putative invertase mRNA, partial cds
Length = 326
Score = 158 bits (340), Expect(2) = 2e-042
Identities = 57/74 (77%), Positives = 64/74 (86%)
Frame = -1 / +1
Query: 1818 NWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPALRPSIPGDR 1639
+WINDPN P+YYKG YH FYQYNPKGAVWGNIVWAHSVS+DLINW + EPA+ PS D
Sbjct: 1 DWINDPNGPLYYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLINWESPEPAIYPSKWFDN 180
Query: 1638 YGCWSGSATVLPDG 1597
YGCWSGSAT+LP+G
Sbjct: 181 YGCWSGSATILPNG 222
Score = 108 bits (230), Expect(2) = 1e-023
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P G VADPDQ P LS + G AGS +QL++S +TE A TMLPHTAPLGLYW* +WY
Sbjct: 221 PFGRIVADPDQHP*LSNHLEG*IAGSGDSQLIKSFETEWAQTMLPHTAPLGLYW*NRWYS 42
Query: 1778 PL*YMGALGSLIQ 1816
PL*Y G GSLIQ
Sbjct: 41 PL*YKGPFGSLIQ 3
Score = 35.9 bits (72), Expect(2) = 2e-042
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 1551 NYQVRNVAYPKNVSDPLLREW 1489
N Q++N A P N SDP LREW
Sbjct: 262 NRQIQNYAVPANSSDPYLREW 324
Score = 23.1 bits (44), Expect(2) = 1e-023
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / -1
Query: 1487 THSRSSGSDTFFGYATF 1537
+HSR GSD F G A F
Sbjct: 326 SHSRRYGSDEFAGTA*F 276
>gb|BU878522.1|BU878522 V048D07 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 701
Score = 66.1 bits (138), Expect(4) = 1e-039
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = -1 / +3
Query: 1011 YDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
Y K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 3 YGRGKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 125
Score = 64.8 bits (135), Expect(4) = 1e-039
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = -1 / +3
Query: 432 KISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVF 304
K+S+R L+D S++ESF GG+TCI SRVYP+ AI ARL++F
Sbjct: 564 KLSVRILVDHSIIESFAQGGRTCITSRVYPTRAIYGSARLFLF 692
Score = 54.2 bits (112), Expect(4) = 1e-039
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = -1 / +3
Query: 885 SGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVSPAAL 715
+G LLQWP+EEVE+LR KS N +KAG V + Q D+ FE+ A+
Sbjct: 132 TGSNLLQWPVEEVESLRLKSKNFNNIEVKAGSAVPLELDGATQLDIVAEFELDRKAI 302
Score = 35.9 bits (72), Expect(4) = 1e-039
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1 / +3
Query: 648 ADVRGGVGPFGLWVLASANRKERTAVFFRVFK 553
A RG +GPFGL VLA + E T V+F V K
Sbjct: 354 ASHRGALGPFGLLVLADDDLTEYTPVYFFVAK 449
>gb|DN493003.1|DN493003 X051B06.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X051B06 3', mRNA sequence
Length = 780
Score = 123 bits (263), Expect(2) = 1e-035
Identities = 49/99 (49%), Positives = 67/99 (67%)
Frame = -1 / -2
Query: 531 VVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSR 352
VVLMC+D ++S+L + + T+ F+D D ISLRSLID S++ESFG G+ CI +R
Sbjct: 641 VVLMCSDQSRSALRDEVDKTTYGAFIDIDPQRENISLRSLIDHSIIESFGGEGRACITNR 462
Query: 351 VYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
VYP LAI ++A L++FNNG V +S L AW M K +N
Sbjct: 461 VYPKLAIHEEAHLFIFNNGTLSVTISSLNAWSMNKAQIN 345
Score = 48.3 bits (99), Expect(2) = 1e-035
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = -1 / -2
Query: 672 ERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 541
++L A ++G +GPFGL LA+ + E+TA+FFR+FK G
Sbjct: 776 QQLWSDANASIKGRLGPFGLLTLATKDLTEQTAIFFRIFKGLKG 645
>gb|BI128034.1|BI128034 G070P01Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 519
Score = 100 bits (214), Expect(3) = 1e-033
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = -1 / +3
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
+RYDYG FYASKTFYD +K RR+LWGW ESD+ DV KGWA +Q IPRTV LD
Sbjct: 51 IRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLD 215
Score = 52.8 bits (109), Expect(3) = 1e-033
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = -1 / +3
Query: 885 SGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVSPAAL 715
+G LLQWP+EEVE+LR K + N +KAG V + Q D+ FE+ A+
Sbjct: 222 TGSNLLQWPVEEVESLRLKGKSFNNIEVKAGSVVPLVLDGATQLDIVAEFELDRKAI 392
Score = 29.0 bits (57), Expect(3) = 1e-033
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 648 ADVRGGVGPFGLWVLASANRKERT 577
A RG +GPFGL VLA + E T
Sbjct: 444 ASHRGALGPFGLLVLADDDLSEYT 515
>gb|CA933245.1|CA933245 MTU5CS.P5.E03 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 570
Score = 73.5 bits (154), Expect(4) = 7e-033
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWR 1405
QV+N+ YP + DPLL +WVK S NPV+VP GI FRDPTTAW+
Sbjct: 91 QVQNLVYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 231
Score = 57.0 bits (118), Expect(4) = 7e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / +1
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 436 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 555
Score = 40.5 bits (82), Expect(4) = 7e-033
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 361 TGMWECVDFYPVSKTG 408
Score = 34.1 bits (68), Expect(4) = 7e-033
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 1644 DRYGCWSGSATVLPDG 1597
D+ G W+GSAT+LPDG
Sbjct: 1 DKNGVWTGSATILPDG 48
>gb|CA933512.1|CA933512 MTU5CS.P9.A07 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 569
Score = 73.5 bits (154), Expect(4) = 7e-033
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -1 / -1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWR 1405
+V+N+AYP + DPLL +WVK S NPV+VP GI FRDPTTAW+
Sbjct: 479 RVQNLAYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 339
Score = 57.0 bits (118), Expect(4) = 7e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / -1
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 134 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 15
Score = 40.5 bits (82), Expect(4) = 7e-033
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / -1
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 209 TGMWECVDFYPVSKTG 162
Score = 34.1 bits (68), Expect(4) = 7e-033
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1 / -1
Query: 1644 DRYGCWSGSATVLPDG 1597
D+ G W+GSAT+LPDG
Sbjct: 569 DKNGVWTGSATILPDG 522
>gb|CK106113.1|CK106113 UA54DPF07.5pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA54DPF07 5', mRNA sequence
Length = 437
Score = 95.5 bits (202), Expect(2) = 1e-031
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = -1 / +2
Query: 1863 VNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGA 1738
VN + RTGYHFQP +NWINDPNAPMYYKG YH FYQYNPK A
Sbjct: 203 VNQVHRTGYHFQPLRNWINDPNAPMYYKGLYHLFYQYNPKAA 328
Score = 62.9 bits (131), Expect(2) = 1e-031
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -1 / +3
Query: 1749 PKGAVWGNIVWAHSVSRDLINWVALEPAL 1663
PK VWGNIVWAHSVS+DLINW +LEPA+
Sbjct: 318 PKLPVWGNIVWAHSVSKDLINWESLEPAI 404
>gb|CA932912.1|CA932912 MTU5CS.P1.B01 Aspen stem cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 535
Score = 75.3 bits (158), Expect(3) = 5e-029
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -1 / -3
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWR 1405
QV+N+AYP + DPLL +WVK S NPV+VP GI FRDPTTAW+
Sbjct: 479 QVQNLAYPADHDDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWK 339
Score = 57.0 bits (118), Expect(3) = 5e-029
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / -3
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 134 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 15
Score = 40.5 bits (82), Expect(3) = 5e-029
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / -3
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 209 TGMWECVDFYPVSKTG 162
>gb|CK095793.1|CK095793 UA28DPE12.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA28DPE12 3', mRNA sequence
Length = 564
Score = 83.1 bits (175), Expect(2) = 1e-022
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -1 / -2
Query: 408 DRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMN 235
D SV+ESFGA G+ I SRVYP++A+ + A LYVFNNG + V L AW M PVMN
Sbjct: 242 DHSVIESFGARGRIAISSRVYPTIAVSEKAHLYVFNNGSETITVENLNAWSMNLPVMN 69
Score = 48.3 bits (99), Expect(2) = 1e-022
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = -1 / -1
Query: 666 LCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
+C + + GG+GPFGL LAS N +E T VFF+VF+ A
Sbjct: 495 MCPKRVSKAPGGLGPFGLLTLASENLEEFTPVFFKVFRAA 376
>gb|BP923506.1|BP923506 BP923506 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-020_J03.f 5', mRNA sequence
Length = 447
Score = 57.0 bits (118), Expect(3) = 2e-022
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1 / +1
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
GP+VKHV+K SLD R+DYY +GTY + ++ PD+P D
Sbjct: 307 GPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEID 426
Score = 51.9 bits (107), Expect(3) = 2e-022
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -1 / +3
Query: 1503 LLREWVKPSHNPVIVPEGGINVTQFRDPTTAWR 1405
LL +WVK S NPV VP GI FRDPTTAW+
Sbjct: 3 LLLKWVKYSGNPV*VPPPGIGAKDFRDPTTAWK 101
Score = 40.5 bits (82), Expect(3) = 2e-022
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / +1
Query: 1266 TGMWECPDFYPVSKGG 1219
TGMWEC DFYPVSK G
Sbjct: 232 TGMWECVDFYPVSKTG 279
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 766,571,498
Number of Sequences: 369679
Number of extensions: 9965872
Number of successful extensions: 50010
Number of sequences better than 1.0e-020: 32
length of database: 67,802,888
effective HSP length: 55
effective length of database: 47,470,543
effective search space used: 29858971547
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)