TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493645.2.1
(870 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU875372.1|BU875372 V006B09 Populus flower cDNA library ... 127 9e-029
gb|BU875838.1|BU875838 V012A12 Populus flower cDNA library ... 127 9e-029
gb|BU883559.1|BU883559 UM93TB12 Populus flower cDNA library... 127 9e-029
gb|CN519897.1|CN519897 GQ0108.B3_I15 GQ010 Populus trichoca... 127 9e-029
gb|CN520140.1|CN520140 GQ0107.B3_L15 GQ010 Populus trichoca... 127 9e-029
gb|CN522391.1|CN522391 GQ0122.B3_E18 GQ012 Populus trichoca... 127 9e-029
gb|CV267158.1|CV267158 WS02030.B21_P18 PTxN-IB-N-A-11 Popul... 127 9e-029
gb|CV273041.1|CV273041 WS0171.B21_H17 PTxD-NR-A-8 Populus t... 127 9e-029
gb|BU826301.1|BU826301 UK119TA07 Populus apical shoot cDNA ... 125 3e-028
gb|BU888895.1|BU888895 P014A04 Populus petioles cDNA librar... 125 3e-028
gb|BU889613.1|BU889613 P023C12 Populus petioles cDNA librar... 125 3e-028
gb|BU890892.1|BU890892 P043B02 Populus petioles cDNA librar... 125 3e-028
gb|BU891190.1|BU891190 P047B02 Populus petioles cDNA librar... 125 3e-028
gb|BU891461.1|BU891461 P050G08 Populus petioles cDNA librar... 125 3e-028
gb|BU892976.1|BU892976 P071G08 Populus petioles cDNA librar... 125 3e-028
gb|BU893155.1|BU893155 P074A04 Populus petioles cDNA librar... 125 3e-028
gb|CF232753.1|CF232753 PtaJXO0015D4D0408 Poplar cDNA librar... 125 3e-028
gb|CV231866.1|CV231866 WS0195.B21_M19 PT-DX-N-A-10 Populus ... 125 3e-028
gb|CV232878.1|CV232878 WS0198.B21_P10 PT-DX-N-A-10 Populus ... 125 3e-028
gb|BU891281.1|BU891281 P048C02 Populus petioles cDNA librar... 119 3e-026
gb|DN488867.1|DN488867 S042E05.3pR Populus imbibed seed cDN... 107 1e-022
gb|DN498593.1|DN498593 S042E05.5pR Populus imbibed seed cDN... 107 1e-022
gb|CX176612.1|CX176612 H03_69-119_15.ab1 leaf inoculated wi... 105 3e-022
gb|BU868194.1|BU868194 M112D05 Populus flower cDNA library ... 105 3e-022
gb|BU869504.1|BU869504 M130H02 Populus flower cDNA library ... 105 3e-022
gb|CN521627.1|CN521627 GQ0114.B3_N20 GQ011 Populus trichoca... 105 3e-022
gb|CN522228.1|CN522228 GQ0124.B3_E22 GQ012 Populus trichoca... 105 3e-022
gb|CV244084.1|CV244084 WS0253.B21_K23 PT-MB-N-A-15 Populus ... 105 3e-022
gb|CX169200.1|CX169200 F03_69-8_11.ab1 leaf inoculated with... 105 3e-022
gb|CX173410.1|CX173410 D12_69-8_08.ab1 leaf inoculated with... 105 3e-022
gb|CX175161.1|CX175161 D01_69-56_07.ab1 leaf inoculated wit... 105 3e-022
gb|DN494604.1|DN494604 M112D05.5pR Populus female catkins c... 105 3e-022
gb|CV242926.1|CV242926 WS02516.B21.1_G21 PT-MB-N-A-15 Popul... 105 4e-022
gb|BU877846.1|BU877846 V039H11 Populus flower cDNA library ... 104 7e-022
gb|CV233258.1|CV233258 WS0121.B21_F17 PT-GT-FL-A-3 Populus ... 103 2e-021
gb|DN485141.1|DN485141 M112D05.3pR Populus female catkins c... 103 2e-021
gb|DT470539.1|DT470539 WS0121.BR_F17 PT-GT-FL-A-3 Populus t... 103 2e-021
gb|BU875102.1|BU875102 V002D03 Populus flower cDNA library ... 102 4e-021
gb|BU875641.1|BU875641 V009E06 Populus flower cDNA library ... 102 4e-021
gb|BU876088.1|BU876088 V016A03 Populus flower cDNA library ... 102 4e-021
gb|BU876385.1|BU876385 V020A05 Populus flower cDNA library ... 102 4e-021
gb|BU876565.1|BU876565 V022D03 Populus flower cDNA library ... 102 4e-021
gb|BU876598.1|BU876598 V022G03 Populus flower cDNA library ... 102 4e-021
gb|BU876688.1|BU876688 V024C04 Populus flower cDNA library ... 102 4e-021
gb|BU876963.1|BU876963 V027E07 Populus flower cDNA library ... 102 4e-021
gb|BU877825.1|BU877825 V039F11 Populus flower cDNA library ... 102 4e-021
gb|BU877867.1|BU877867 V040C07 Populus flower cDNA library ... 102 4e-021
gb|BU878172.1|BU878172 V043H12 Populus flower cDNA library ... 102 4e-021
gb|BU878197.1|BU878197 V044C05 Populus flower cDNA library ... 102 4e-021
gb|BU878226.1|BU878226 V044E12 Populus flower cDNA library ... 102 4e-021
gb|BU878543.1|BU878543 V048F05 Populus flower cDNA library ... 102 4e-021
gb|BU878571.1|BU878571 V049A02 Populus flower cDNA library ... 102 4e-021
gb|BU878656.1|BU878656 V049H06 Populus flower cDNA library ... 102 4e-021
gb|BU878849.1|BU878849 V052E08 Populus flower cDNA library ... 102 4e-021
gb|BU878937.1|BU878937 V053F11 Populus flower cDNA library ... 102 4e-021
gb|BU879032.1|BU879032 V054H05 Populus flower cDNA library ... 102 4e-021
gb|BU879245.1|BU879245 V057G07 Populus flower cDNA library ... 102 4e-021
gb|BU879331.1|BU879331 V058H05 Populus flower cDNA library ... 102 4e-021
gb|BU879745.1|BU879745 V063H05 Populus flower cDNA library ... 102 4e-021
gb|CK111954.1|CK111954 V060D11 Populus male catkins cDNA li... 102 4e-021
gb|DN501837.1|DN501837 V027D06.5pR Populus male catkins cDN... 102 4e-021
gb|DN491895.1|DN491895 V027D06.3pR Populus male catkins cDN... 101 7e-021
gb|BU877970.1|BU877970 V041E09 Populus flower cDNA library ... 100 9e-021
gb|CV239724.1|CV239724 WS0233.B21_E14 PT-MB-A-13 Populus tr... 100 9e-021
>gb|BU875372.1|BU875372 V006B09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 567
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / +3
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 147 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 326
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 327 KGKPKCP*C 353
>gb|BU875838.1|BU875838 V012A12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 482
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / +1
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 160 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 339
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 340 KGKPKCP*C 366
>gb|BU883559.1|BU883559 UM93TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 517
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 137 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 316
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 317 KGKPKCP*C 343
>gb|CN519897.1|CN519897 GQ0108.B3_I15 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_I15 5', mRNA sequence
Length = 576
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / +1
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 151 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 330
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 331 KGKPKCP*C 357
>gb|CN520140.1|CN520140 GQ0107.B3_L15 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_L15 5', mRNA sequence
Length = 571
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 143 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 322
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 323 KGKPKCP*C 349
>gb|CN522391.1|CN522391 GQ0122.B3_E18 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_E18 5', mRNA sequence
Length = 521
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / +3
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 150 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 329
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 330 KGKPKCP*C 356
>gb|CV267158.1|CV267158 WS02030.B21_P18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_P18 3', mRNA sequence
Length = 579
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / -2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 443 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 264
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 263 KGKPKCP*C 237
>gb|CV273041.1|CV273041 WS0171.B21_H17 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_H17 3', mRNA sequence
Length = 592
Score = 127 bits (272), Expect = 9e-029
Identities = 47/69 (68%), Positives = 49/69 (71%)
Frame = +2 / -2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 456 VTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 277
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 276 KGKPKCP*C 250
>gb|BU826301.1|BU826301 UK119TA07 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 575
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 143 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 322
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 323 KGKPKCP*C 349
>gb|BU888895.1|BU888895 P014A04 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 476
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +1
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 154 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 333
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 334 KGKPKCP*C 360
>gb|BU889613.1|BU889613 P023C12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 432
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +3
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 165 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 344
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 345 KGKPKCP*C 371
>gb|BU890892.1|BU890892 P043B02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 499
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 167 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 346
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 347 KGKPKCP*C 373
>gb|BU891190.1|BU891190 P047B02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 576
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +1
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 166 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 345
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 346 KGKPKCP*C 372
>gb|BU891461.1|BU891461 P050G08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 567
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 167 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 346
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 347 KGKPKCP*C 373
>gb|BU892976.1|BU892976 P071G08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 577
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 167 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 346
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 347 KGKPKCP*C 373
>gb|BU893155.1|BU893155 P074A04 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 584
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 167 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 346
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 347 KGKPKCP*C 373
>gb|CF232753.1|CF232753 PtaJXO0015D4D0408 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 591
Score = 125 bits (268), Expect = 3e-028
Identities = 46/69 (66%), Positives = 48/69 (69%)
Frame = +2 / +3
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 165 VTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNS 344
Query: 485 HGNRTRPKC 511
G P C
Sbjct: 345 KGKPKCP*C 371
>gb|CV231866.1|CV231866 WS0195.B21_M19 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_M19 3', mRNA sequence
Length = 589
Score = 125 bits (268), Expect = 3e-028
Identities = 46/68 (67%), Positives = 48/68 (70%)
Frame = +2 / -3
Query: 308 SMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGH 487
+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 443 TMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSK 264
Query: 488 GNRTRPKC 511
G P C
Sbjct: 263 GKPKCP*C 240
>gb|CV232878.1|CV232878 WS0198.B21_P10 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_P10 3', mRNA sequence
Length = 555
Score = 125 bits (268), Expect = 3e-028
Identities = 46/68 (67%), Positives = 48/68 (70%)
Frame = +2 / +2
Query: 308 SMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGH 487
+MA SGFCD KC+VRCSKA D CLKYCGICC C CVPSGT GNK ECPCYRDM
Sbjct: 158 TMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSK 337
Query: 488 GNRTRPKC 511
G P C
Sbjct: 338 GKPKCP*C 361
>gb|BU891281.1|BU891281 P048C02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 571
Score = 119 bits (254), Expect = 3e-026
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = +2 / +2
Query: 308 SMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGH 487
+MA SGFCD KC+ RCSKA D CLKYCGICC C CVPSGT GNK E PCYRDM
Sbjct: 170 TMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHESPCYRDMKNSK 349
Query: 488 GNRTRPKC 511
G P C
Sbjct: 350 GKPKCP*C 373
>gb|DN488867.1|DN488867 S042E05.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S042E05 3', mRNA sequence
Length = 659
Score = 107 bits (228), Expect = 1e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / -2
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 496 MANSSFCSKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 317
Query: 491 NRTRP 505
P
Sbjct: 316 KPKCP 302
>gb|DN498593.1|DN498593 S042E05.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S042E05 5', mRNA sequence
Length = 701
Score = 107 bits (228), Expect = 1e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +1
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 163 MANSSFCSKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 342
Query: 491 NRTRP 505
P
Sbjct: 343 KPKCP 357
>gb|CX176612.1|CX176612 H03_69-119_15.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 674
Score = 105 bits (225), Expect(2) = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 135 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 314
Query: 491 NRTRP 505
P
Sbjct: 315 KPKCP 329
Score = 21.7 bits (41), Expect(2) = 3e-022
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2 / +3
Query: 794 CIVIRTHPWLWNCY*MQKKKKK 859
C RT + CY ++ KKKK
Sbjct: 606 CCSCRTSSCVKVCYFLRSKKKK 671
>gb|BU868194.1|BU868194 M112D05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 389
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 132 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 311
Query: 491 NRTRP 505
P
Sbjct: 312 KPKCP 326
>gb|BU869504.1|BU869504 M130H02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 607
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +2
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 140 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 319
Query: 491 NRTRP 505
P
Sbjct: 320 KPKCP 334
>gb|CN521627.1|CN521627 GQ0114.B3_N20 GQ011 Populus trichocarpa x Populus deltoides cDNA
clone GQ0114_N20 5', mRNA sequence
Length = 433
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 126 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 305
Query: 491 NRTRP 505
P
Sbjct: 306 KPKCP 320
>gb|CN522228.1|CN522228 GQ0124.B3_E22 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0124_E22 5', mRNA sequence
Length = 605
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 108 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 287
Query: 491 NRTRP 505
P
Sbjct: 288 KPKCP 302
>gb|CV244084.1|CV244084 WS0253.B21_K23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0253_K23 3', mRNA sequence
Length = 701
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / -3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 597 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 418
Query: 491 NRTRP 505
P
Sbjct: 417 KPKCP 403
>gb|CX169200.1|CX169200 F03_69-8_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 587
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 66 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 245
Query: 491 NRTRP 505
P
Sbjct: 246 KPKCP 260
>gb|CX173410.1|CX173410 D12_69-8_08.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 575
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 66 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 245
Query: 491 NRTRP 505
P
Sbjct: 246 KPKCP 260
>gb|CX175161.1|CX175161 D01_69-56_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 605
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +1
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 319 MAKSSFCTKKCNTRCANAGVQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 498
Query: 491 NRTRP 505
P
Sbjct: 499 KPKCP 513
>gb|DN494604.1|DN494604 M112D05.5pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M112D05 5', mRNA sequence
Length = 692
Score = 105 bits (225), Expect = 3e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / +3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 144 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 323
Query: 491 NRTRP 505
P
Sbjct: 324 KPKCP 338
>gb|CV242926.1|CV242926 WS02516.B21.1_G21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_G21 3', mRNA sequence
Length = 565
Score = 105 bits (224), Expect = 4e-022
Identities = 39/65 (60%), Positives = 40/65 (61%)
Frame = +2 / -3
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 452 MAKSSFCAKKCDTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNSKG 273
Query: 491 NRTRP 505
P
Sbjct: 272 KPKCP 258
>gb|BU877846.1|BU877846 V039H11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 104 bits (222), Expect = 7e-022
Identities = 38/69 (55%), Positives = 43/69 (62%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY DMT
Sbjct: 140 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYADMT 319
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 320 THGGRHKCP 346
>gb|CV233258.1|CV233258 WS0121.B21_F17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0121_F17 3', mRNA sequence
Length = 609
Score = 103 bits (219), Expect = 2e-021
Identities = 38/67 (56%), Positives = 39/67 (58%)
Frame = +2 / -3
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V G FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD
Sbjct: 442 VISCGVAFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNS 263
Query: 485 HGNRTRP 505
G P
Sbjct: 262 KGKPKCP 242
>gb|DN485141.1|DN485141 M112D05.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M112D05 3', mRNA sequence
Length = 594
Score = 103 bits (219), Expect = 2e-021
Identities = 38/65 (58%), Positives = 39/65 (60%)
Frame = +2 / -2
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MA S FC KC RC+ A D CLKYCGICC C CVP GT GNK ECPCYRD G
Sbjct: 455 MAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPFGTYGNKHECPCYRDKRNSKG 276
Query: 491 NRTRP 505
P
Sbjct: 275 KPKCP 261
>gb|DT470539.1|DT470539 WS0121.BR_F17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0121_F17 5', mRNA sequence
Length = 618
Score = 103 bits (219), Expect = 2e-021
Identities = 38/67 (56%), Positives = 39/67 (58%)
Frame = +2 / +2
Query: 305 VSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTG 484
V G FC KC RC+ A D CLKYCGICC C CVPSGT GNK ECPCYRD
Sbjct: 293 VISCGVAFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCVPSGTYGNKHECPCYRDKRNS 472
Query: 485 HGNRTRP 505
G P
Sbjct: 473 KGKPKCP 493
>gb|BU875102.1|BU875102 V002D03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 636
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 126 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 305
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 306 THGGRHKCP 332
>gb|BU875641.1|BU875641 V009E06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 494
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 126 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 305
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 306 THGGRHKCP 332
>gb|BU876088.1|BU876088 V016A03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 646
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 144 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 323
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 324 THGGRHKCP 350
>gb|BU876385.1|BU876385 V020A05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 545
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +1
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 127 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 306
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 307 THGGRHKCP 333
>gb|BU876565.1|BU876565 V022D03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 436
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 108 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 287
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 288 THGGRHKCP 314
>gb|BU876598.1|BU876598 V022G03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 464
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +1
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 112 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 291
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 292 THGGRHKCP 318
>gb|BU876688.1|BU876688 V024C04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 580
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +1
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 121 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 300
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 301 THGGRHKCP 327
>gb|BU876963.1|BU876963 V027E07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 441
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +1
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 124 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 303
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 304 THGGRHKCP 330
>gb|BU877825.1|BU877825 V039F11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 654
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 140 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 319
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 320 THGGRHKCP 346
>gb|BU877867.1|BU877867 V040C07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 553
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 135 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 314
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 315 THGGRHKCP 341
>gb|BU878172.1|BU878172 V043H12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 627
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 140 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 319
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 320 THGGRHKCP 346
>gb|BU878197.1|BU878197 V044C05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 622
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 122 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 301
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 302 THGGRHKCP 328
>gb|BU878226.1|BU878226 V044E12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 583
Score = 102 bits (217), Expect = 4e-021
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
+R AG C KC RCSKASRH C++ C CC CNCVP GT+GN+D CPCY +MT
Sbjct: 110 IRTVEAGKINCKSKCEYRCSKASRHKMCIRACNTCCQRCNCVPPGTSGNEDTCPCYANMT 289
Query: 479 TGHGNRTRP 505
T G P
Sbjct: 290 THGGRHKCP 316
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 438,298,435
Number of Sequences: 369679
Number of extensions: 6908946
Number of successful extensions: 82175
Number of sequences better than 1.0e-020: 70
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 11513360460
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)