TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4548790.2.1
(1044 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch ... 352 e-123
gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Re... 349 e-122
gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pin... 352 e-121
gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo li... 350 e-120
gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus... 340 e-119
gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response R... 352 e-116
gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response R... 327 e-115
gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus cal... 321 e-114
gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus... 352 e-112
gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response R... 352 e-112
gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus add... 310 e-111
gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potas... 352 e-109
gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for... 297 e-107
gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch... 297 e-107
gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control P... 297 e-107
gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine ro... 294 e-106
gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response R... 284 e-104
gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch... 284 e-104
gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control P... 284 e-104
gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed... 283 e-104
gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciat... 351 e-104
gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from lobl... 291 e-104
gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblo... 291 e-104
gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus ad... 287 e-104
gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine r... 290 e-103
gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo li... 290 e-103
gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus... 289 e-103
gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from lobl... 279 e-102
gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from lobl... 280 e-102
gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control P... 281 e-102
gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus adde... 298 e-102
gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pin... 352 e-101
gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 ... 352 e-101
gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus mag... 273 e-101
gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine r... 278 e-101
gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus... 272 e-101
gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control P... 284 e-101
gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds 277 e-101
gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds 277 e-101
gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds 277 e-101
gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo li... 276 e-100
gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds 277 e-100
gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism... 280 e-100
gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus mag... 274 e-100
gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potas... 312 4e-099
gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds 271 1e-098
gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus m... 274 3e-098
gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered lo... 279 5e-098
gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo li... 268 6e-097
gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine r... 277 2e-096
gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblo... 260 2e-096
gb|CF400637.1|CF400637 RTWW1_6_B06.g1_A015 Well-watered lob... 277 2e-096
gb|DR010861.1|DR010861 HEAT1_1_F12.g1_A029 Root at 37 C for... 269 2e-096
gb|DR163422.1|DR163422 RTFE1_42_G07.g1_A029 Roots minus iro... 352 2e-096
gb|DR023285.1|DR023285 STRS1_56_D02.g1_A034 Shoot tip pitch... 352 3e-096
gb|DT632636.1|DT632636 EST1147567 Normalized pine embryo li... 210 6e-096
gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus pota... 270 3e-095
gb|CO367487.1|CO367487 RTK1_34_D03.g1_A029 Roots minus pota... 253 5e-095
gb|DR092307.1|DR092307 RTAL1_28_G05.b1_A029 Roots plus adde... 278 5e-095
gb|CX713463.1|CX713463 RTPQ1_9_C04.g1_A032 Roots treated wi... 347 8e-095
gb|CX646780.1|CX646780 COLD1_11_B06.g1_A029 Root cold Pinus... 346 1e-094
gb|DR050310.1|DR050310 RTBOR1_22_D04.g1_A029 Roots plus add... 250 2e-094
gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pin... 260 3e-094
gb|DT632413.1|DT632413 EST1147344 Normalized pine embryo li... 263 2e-093
gb|DR096360.1|DR096360 STRR1_27_B05.g1_A033 Stem Response R... 284 2e-092
gb|CO367410.1|CO367410 RTK1_34_D03.b1_A029 Roots minus pota... 272 2e-092
gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus m... 150 3e-092
gb|CO166169.1|CO166169 FLD1_59_G05.g1_A029 Root flooded Pin... 232 7e-092
gb|DR019211.1|DR019211 STRS1_28_B06.g1_A034 Shoot tip pitch... 239 8e-092
gb|DR113034.1|DR113034 RTS1_32_B12.g1_A029 Roots minus sulf... 337 9e-092
gb|DR093671.1|DR093671 STRR1_9_E07.g1_A033 Stem Response Re... 242 9e-092
gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control ... 284 1e-091
gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response R... 267 6e-091
gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus... 275 9e-091
gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered lo... 289 1e-090
gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo li... 299 2e-090
gb|AW011524.1|AW011524 ST21H02 Pine TriplEx shoot tip libra... 276 4e-090
gb|CR393417.1|CR393417 CR393417 RN Pinus pinaster cDNA clon... 296 1e-089
gb|DR051834.1|DR051834 RTBOR1_32_E10.g1_A029 Roots plus add... 233 3e-089
gb|DR746394.1|DR746394 RTCU1_36_E04.g1_A029 Roots plus adde... 258 1e-086
gb|DR745029.1|DR745029 RTCU1_26_C03.g1_A029 Roots plus adde... 280 3e-086
gb|DR089298.1|DR089298 RTAL1_7_G03.g1_A029 Roots plus added... 228 4e-086
gb|CF479851.1|CF479851 RTWW3_12_D07.g1_A022 Well-watered lo... 227 5e-086
gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered lob... 222 7e-086
gb|BG275593.1|BG275593 NXSI_143_F09_F NXSI (Nsf Xylem Side ... 317 1e-085
gb|CF668454.1|CF668454 RTCNT1_36_C09.g1_A029 Root control P... 306 2e-085
gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered lo... 289 2e-085
gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus pota... 261 8e-085
gb|DR022663.1|DR022663 STRS1_52_D06.g1_A034 Shoot tip pitch... 222 2e-084
gb|DR683982.1|DR683982 EST1074058 Normalized pine embryo li... 277 3e-084
gb|DT631935.1|DT631935 EST1146866 Normalized pine embryo li... 277 3e-084
gb|DR168662.1|DR168662 RTPHOS1_27_B09.b1_A029 Roots minus p... 295 5e-084
gb|DR168497.1|DR168497 RTPHOS1_25_G11.g1_A029 Roots minus p... 215 1e-083
gb|DR111040.1|DR111040 RTS1_14_G09.g1_A029 Roots minus sulf... 306 4e-083
gb|BX253271.1|BX253271 BX253271 Pinus pinaster differenciat... 216 1e-082
gb|DR096352.1|DR096352 STRR1_27_A07.g1_A033 Stem Response R... 216 1e-082
gb|DR055601.1|DR055601 RTCA1_24_E10.g2_A029 Roots minus cal... 272 2e-082
gb|DT633920.1|DT633920 EST1148851 Normalized pine embryo li... 168 2e-082
gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus mag... 224 5e-082
gb|BX251144.1|BX251144 BX251144 Pinus pinaster differenciat... 213 9e-082
gb|CX648594.1|CX648594 COLD1_29_D11.g1_A029 Root cold Pinus... 240 2e-081
gb|DR742067.1|DR742067 RTCU1_1_B09.g1_A029 Roots plus added... 240 2e-081
gb|BX682844.1|BX682844 BX682844 Pinus pinaster differenciat... 211 3e-081
gb|BX251613.1|BX251613 BX251613 Pinus pinaster differenciat... 211 3e-081
gb|DR100480.1|DR100480 STRR1_64_A12.g1_A033 Stem Response R... 208 3e-080
gb|DR165660.1|DR165660 RTPHOS1_6_B10.g1_A029 Roots minus ph... 272 2e-079
gb|DR056635.1|DR056635 RTCA1_31_C07.g1_A029 Roots minus cal... 260 9e-079
gb|DR100599.1|DR100599 STRR1_65_E02.g1_A033 Stem Response R... 270 7e-077
gb|BF609490.1|BF609490 NXSI_043_C03_F NXSI (Nsf Xylem Side ... 204 4e-076
gb|BF778581.1|BF778581 NXSI_088_D02_F NXSI (Nsf Xylem Side ... 233 2e-075
gb|DR056610.1|DR056610 RTCA1_31_A02.g1_A029 Roots minus cal... 182 2e-074
gb|AW290718.1|AW290718 NXNV046B02F Nsf Xylem Normal wood Ve... 275 4e-073
gb|CD027376.1|CD027376 NXNV046B02 Nsf Xylem Normal wood Ver... 275 4e-073
gb|BM427751.1|BM427751 NXRV_002_G05_F NXRV (Nsf Xylem Root ... 187 2e-072
gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pi... 188 4e-072
gb|DR119331.1|DR119331 RTMG1_22_C11.g1_A029 Roots minus mag... 269 3e-071
gb|DR100574.1|DR100574 STRR1_65_E02.b1_A033 Stem Response R... 264 1e-069
gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered lob... 221 1e-068
gb|CV035603.1|CV035603 RTNACL1_41_D10.b1_A029 Roots plus ad... 234 8e-068
gb|DR687528.1|DR687528 EST1077610 Normalized pine embryo li... 168 8e-068
gb|BE049743.1|BE049743 NXNV_143_C08_F Nsf Xylem Normal wood... 257 1e-067
gb|DR119250.1|DR119250 RTMG1_22_C11.b1_A029 Roots minus mag... 257 1e-067
gb|DR163235.1|DR163235 RTFE1_41_E12.g1_A029 Roots minus iro... 240 2e-067
gb|BE762031.1|BE762031 NXCI_076_B10_F NXCI (Nsf Xylem Compr... 207 2e-067
gb|BX250040.1|BX250040 BX250040 Pinus pinaster differenciat... 168 9e-067
gb|DR163745.1|DR163745 RTFE1_44_D12.g1_A029 Roots minus iro... 240 1e-066
gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control ... 240 1e-066
gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus... 253 2e-066
gb|CO361435.1|CO361435 NDL2_4_G08.g1_A029 Needles control 2... 188 4e-066
gb|CV138360.1|CV138360 EST849569 Sequencing ESTs from loblo... 156 1e-065
gb|CF477424.1|CF477424 RTWW3_7_B01.g1_A022 Well-watered lob... 151 8e-065
gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for... 247 9e-065
gb|DR053875.1|DR053875 RTCA1_13_G12.g1_A029 Roots minus cal... 150 1e-064
gb|BX251561.1|BX251561 BX251561 Pinus pinaster differenciat... 155 2e-064
gb|DR055444.1|DR055444 RTCA1_23_E11.g2_A029 Roots minus cal... 212 2e-064
gb|DR100138.1|DR100138 STRR1_62_B05.b1_A033 Stem Response R... 245 5e-064
gb|DT639052.1|DT639052 EST1153983 Normalized pine embryo li... 181 7e-064
gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered lo... 240 1e-063
gb|BF609081.1|BF609081 NXSI_040_B10_F NXSI (Nsf Xylem Side ... 241 8e-063
gb|DR102735.1|DR102735 STRR1_83_A06.g1_A033 Stem Response R... 241 8e-063
gb|DR015200.1|DR015200 STRS1_2_C05.b1_A034 Shoot tip pitch ... 240 1e-062
gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2... 240 1e-062
gb|DR163147.1|DR163147 RTFE1_41_E12.b1_A029 Roots minus iro... 240 1e-062
gb|DR163481.1|DR163481 RTFE1_43_D12.b1_A029 Roots minus iro... 240 1e-062
gb|BF518096.1|BF518096 NXSI_030_H10_F NXSI (Nsf Xylem Side ... 153 2e-062
gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side ... 221 9e-062
gb|CF474408.1|CF474408 RTWW2_20_A09.g1_A021 Well-watered lo... 237 1e-061
gb|DR163657.1|DR163657 RTFE1_44_D12.b1_A029 Roots minus iro... 236 3e-061
gb|BQ198383.1|BQ198383 NXLV130_C02_F NXLV (Nsf Xylem Late w... 225 4e-061
gb|DR092975.1|DR092975 STRR1_5_F06.b1_A033 Stem Response Re... 233 1e-060
gb|BF186094.1|BF186094 NXCI_132_F04_F NXCI (Nsf Xylem Compr... 227 8e-059
gb|DR098461.1|DR098461 STRR1_45_E01.g1_A033 Stem Response R... 226 2e-058
gb|DR090533.1|DR090533 RTAL1_15_E12.g1_A029 Roots plus adde... 146 2e-058
gb|DR070179.1|DR070179 RTDK1_11_F07.g1_A029 Roots, dark Pin... 134 3e-058
gb|CR393207.1|CR393207 CR393207 RN Pinus pinaster cDNA clon... 130 6e-057
gb|AW290022.1|AW290022 NXNV009F01F Nsf Xylem Normal wood Ve... 127 4e-056
gb|CD026679.1|CD026679 NXNV009F01 Nsf Xylem Normal wood Ver... 127 4e-056
gb|BF609532.1|BF609532 NXSI_043_G01_F NXSI (Nsf Xylem Side ... 135 4e-056
gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus ad... 218 5e-056
gb|BM367687.1|BM367687 NXLV_053_B09_F NXLV (Nsf Xylem Late ... 159 5e-056
gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered lob... 105 1e-055
gb|CF396870.1|CF396870 RTDS2_24_A10.g1_A021 Drought-stresse... 215 3e-055
gb|DR090297.1|DR090297 RTAL1_14_D02.b1_A029 Roots plus adde... 213 2e-054
gb|DR112973.1|DR112973 RTS1_32_B12.b1_A029 Roots minus sulf... 213 2e-054
gb|DR090465.1|DR090465 RTAL1_15_E12.b1_A029 Roots plus adde... 212 3e-054
gb|CF471900.1|CF471900 RTDS1_7_A08.b1_A015 Drought-stressed... 212 4e-054
gb|CF668214.1|CF668214 RTCNT1_35_D04.b1_A029 Root control P... 210 1e-053
gb|DR024751.1|DR024751 STRS1_67_F03.b1_A034 Shoot tip pitch... 210 1e-053
gb|DT637181.1|DT637181 EST1152112 Normalized pine embryo li... 179 1e-053
gb|CF386668.1|CF386668 RTDR1_16_C08.b1_A015 Loblolly pine r... 208 7e-053
gb|DR015024.1|DR015024 STRS1_1_B12.b1_A034 Shoot tip pitch ... 208 7e-053
gb|AA556861.1|AA556861 703 Loblolly pine C Pinus taeda cDNA... 154 3e-052
gb|DR071475.1|DR071475 RTDK1_20_C09.b1_A029 Roots, dark Pin... 205 3e-052
gb|AW290008.1|AW290008 NXNV009E08F Nsf Xylem Normal wood Ve... 111 1e-051
gb|CD026675.1|CD026675 NXNV009E08 Nsf Xylem Normal wood Ver... 111 1e-051
gb|DR010784.1|DR010784 HEAT1_1_F12.b1_A029 Root at 37 C for... 203 2e-051
gb|DR102236.1|DR102236 STRR1_79_C04.g1_A033 Stem Response R... 111 2e-051
gb|CX649395.1|CX649395 COLD1_35_B04.b1_A029 Root cold Pinus... 200 1e-050
gb|BM902805.1|BM902805 NXLV_075_E10_F NXLV (Nsf Xylem Late ... 199 3e-050
gb|DR050231.1|DR050231 RTBOR1_22_D04.b1_A029 Roots plus add... 199 4e-050
gb|BQ107011.1|BQ107011 NXLV085_E06_F NXLV (Nsf Xylem Late w... 198 5e-050
gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus... 197 1e-049
gb|DR021638.1|DR021638 STRS1_46_B05.b1_A034 Shoot tip pitch... 197 1e-049
gb|DR694543.1|DR694543 EST1084635 Normalized pine embryo li... 132 2e-049
gb|CV035673.1|CV035673 RTNACL1_41_D10.g1_A029 Roots plus ad... 182 3e-048
gb|AA556812.1|AA556812 654 Loblolly pine C Pinus taeda cDNA... 125 8e-048
gb|BF778542.1|BF778542 NXSI_085_H09_F NXSI (Nsf Xylem Side ... 190 1e-047
gb|DR092690.1|DR092690 STRR1_3_D06.b1_A033 Stem Response Re... 190 1e-047
gb|BM158415.1|BM158415 NXLV_034_B09_F NXLV (Nsf Xylem Late ... 188 4e-047
gb|CO169428.1|CO169428 NDL1_7_B04.b1_A029 Needles control P... 188 4e-047
gb|DR089220.1|DR089220 RTAL1_7_G03.b1_A029 Roots plus added... 188 4e-047
gb|AW698185.1|AW698185 NXNV_074_D07_F Nsf Xylem Normal wood... 185 4e-046
gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus cal... 183 1e-045
gb|AA556399.1|AA556399 254 Loblolly pine C Pinus taeda cDNA... 87 3e-045
gb|AW985386.1|AW985386 NXNV_134_G08_F Nsf Xylem Normal wood... 181 7e-045
gb|CF668373.1|CF668373 RTCNT1_36_C09.b1_A029 Root control P... 181 7e-045
gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pin... 179 2e-044
gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered lob... 179 3e-044
gb|BF517063.1|BF517063 NXSI_008_G03_F NXSI (Nsf Xylem Side ... 91 4e-044
gb|DR692513.1|DR692513 EST1082601 Normalized pine embryo li... 150 1e-043
gb|DR071242.1|DR071242 RTDK1_18_C12.g1_A029 Roots, dark Pin... 103 1e-043
gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus pota... 177 2e-043
gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus... 176 3e-043
gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus adde... 175 6e-043
gb|CO171240.1|CO171240 NDL1_20_C09.b1_A029 Needles control ... 165 5e-042
gb|CF400511.1|CF400511 RTWW1_6_B06.b1_A015 Well-watered lob... 171 7e-042
gb|BQ654413.1|BQ654413 NXRV080_A02_F NXRV (Nsf Xylem Root w... 83 2e-041
gb|CO363885.1|CO363885 RTK1_12_H12.b1_A029 Roots minus pota... 100 4e-040
gb|DR092742.1|DR092742 STRR1_3_D06.g1_A033 Stem Response Re... 164 1e-039
gb|CF385917.1|CF385917 RTDR1_7_F11.b1_A015 Loblolly pine ro... 161 6e-039
gb|DR070096.1|DR070096 RTDK1_11_F07.b1_A029 Roots, dark Pin... 160 1e-038
gb|CF479772.1|CF479772 RTWW3_12_D07.b1_A022 Well-watered lo... 158 7e-038
gb|DR022594.1|DR022594 STRS1_52_D06.b1_A034 Shoot tip pitch... 158 7e-038
gb|CF475767.1|CF475767 RTWW2_15_D07.b1_A021 Well-watered lo... 156 2e-037
gb|DR054266.1|DR054266 RTCA1_16_F08.b1_A029 Roots minus cal... 156 2e-037
gb|AW290292.1|AW290292 NXNV018A05F Nsf Xylem Normal wood Ve... 156 3e-037
gb|CD026951.1|CD026951 NXNV018A05 Nsf Xylem Normal wood Ver... 156 3e-037
gb|CO369775.1|CO369775 RTK1_54_A10.b1_A029 Roots minus pota... 156 3e-037
gb|DR070069.1|DR070069 RTDK1_11_D01.b1_A029 Roots, dark Pin... 156 3e-037
gb|DR096283.1|DR096283 STRR1_27_A07.b1_A033 Stem Response R... 156 3e-037
gb|DR099094.1|DR099094 STRR1_53_C12.b1_A033 Stem Response R... 156 3e-037
gb|BF049828.1|BF049828 NXCI_111_D09_F NXCI (Nsf Xylem Compr... 67 4e-037
gb|CO369680.1|CO369680 RTK1_48_F01.g1_A029 Roots minus pota... 155 5e-037
gb|DR070227.1|DR070227 RTDK1_12_C03.b1_A029 Roots, dark Pin... 153 2e-036
gb|DR072100.1|DR072100 RTDK1_24_C09.b1_A029 Roots, dark Pin... 151 9e-036
gb|CX651774.1|CX651774 COLD1_54_E06.g1_A029 Root cold Pinus... 68 4e-035
gb|BG039056.1|BG039056 NXSI_092_B09_F NXSI (Nsf Xylem Side ... 98 5e-035
gb|AW226065.1|AW226065 ST76H11 Pine TriplEx shoot tip libra... 147 1e-034
gb|DR055059.1|DR055059 RTCA1_21_G09.b1_A029 Roots minus cal... 147 1e-034
gb|CO201071.1|CO201071 RTCNT2_3_A06.g1_A029 Root control 2 ... 146 3e-034
gb|AW587662.1|AW587662 ST63B06 Pine TriplEx shoot tip libra... 68 1e-033
gb|BE582419.1|BE582419 NXCI_033_B08_F NXCI (Nsf Xylem Compr... 66 3e-033
gb|DR691294.1|DR691294 EST1081381 Normalized pine embryo li... 124 3e-033
gb|AW290421.1|AW290421 NXNV020D02F Nsf Xylem Normal wood Ve... 117 2e-032
gb|CD027081.1|CD027081 NXNV020D02 Nsf Xylem Normal wood Ver... 117 2e-032
gb|CO168791.1|CO168791 NDL1_2_C05.g1_A029 Needles control P... 127 8e-032
gb|BE187464.1|BE187464 NXNV_98_E12_F Nsf Xylem Normal wood ... 137 1e-031
gb|BE187483.1|BE187483 NXNV_98_G09_F Nsf Xylem Normal wood ... 137 1e-031
gb|DR102349.1|DR102349 STRR1_80_B02.g1_A033 Stem Response R... 137 1e-031
gb|DT635613.1|DT635613 EST1150544 Normalized pine embryo li... 60 2e-031
gb|DR050360.1|DR050360 RTBOR1_23_A06.b1_A029 Roots plus add... 135 6e-031
gb|BF517775.1|BF517775 NXSI_031_A12_F NXSI (Nsf Xylem Side ... 61 1e-030
gb|DR049222.1|DR049222 RTBOR1_14_A04.g1_A029 Roots plus add... 120 3e-030
gb|CD020758.1|CD020758 NXNV_085_G07_F Nsf Xylem Normal wood... 131 7e-030
gb|DR689717.1|DR689717 EST1079803 Normalized pine embryo li... 60 2e-029
gb|CF401946.1|CF401946 RTWW1_16_F09.b1_A015 Well-watered lo... 129 4e-029
gb|AW697618.1|AW697618 ST61B04 Pine TriplEx shoot tip libra... 70 4e-029
gb|BF610570.1|BF610570 NXSI_060_B07_F NXSI (Nsf Xylem Side ... 68 5e-029
gb|CO200898.1|CO200898 RTCNT2_2_G03.b1_A029 Root control 2 ... 126 2e-028
gb|DR684423.1|DR684423 EST1074500 Normalized pine embryo li... 126 2e-028
gb|DR051762.1|DR051762 RTBOR1_32_E10.b1_A029 Roots plus add... 126 3e-028
gb|BE187427.1|BE187427 NXNV_163_H07_F Nsf Xylem Normal wood... 124 9e-028
gb|CO368747.1|CO368747 RTK1_42_C06.g1_A029 Roots minus pota... 73 1e-027
gb|BF777631.1|BF777631 NXSI_070_G06_F NXSI (Nsf Xylem Side ... 66 5e-027
gb|DR055360.1|DR055360 RTCA1_23_E11.b1_A029 Roots minus cal... 121 1e-026
gb|CO197560.1|CO197560 GEO1_7_H02.b1_A029 Root gravitropism... 120 1e-026
gb|DR021165.1|DR021165 STRS1_42_F09.g1_A034 Shoot tip pitch... 120 2e-026
gb|DR079899.1|DR079899 RTFEPL1_18_B10.g1_A029 Roots plus ad... 70 3e-026
gb|DR162969.1|DR162969 RTFE1_23_E05.b1_A029 Roots minus iro... 77 4e-025
gb|DR741991.1|DR741991 RTCU1_1_B09.b1_A029 Roots plus added... 115 7e-025
gb|BQ635086.1|BQ635086 NXRV076_G12_F NXRV (Nsf Xylem Root w... 61 7e-024
gb|BE761955.1|BE761955 NXCI_075_C03_F NXCI (Nsf Xylem Compr... 70 1e-023
gb|DR100293.1|DR100293 STRR1_63_C05.b1_A033 Stem Response R... 110 2e-023
gb|AW698040.1|AW698040 NXNV_078_B06_F Nsf Xylem Normal wood... 66 2e-022
gb|BF186130.1|BF186130 NXCI_133_A11_F NXCI (Nsf Xylem Compr... 62 3e-021
gb|DR070635.1|DR070635 RTDK1_14_D09.g1_A029 Roots, dark Pin... 103 3e-021
gb|BF609736.1|BF609736 NXSI_048_G12_F NXSI (Nsf Xylem Side ... 61 5e-021
gb|U64894.1|PTU64894 Pinus taeda expansin mRNA, partial cds 59 8e-021
>gb|DR015281.1|DR015281 STRS1_2_C05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_C05_A034 5', mRNA sequence
Length = 848
Score = 352 bits (762), Expect(3) = e-123
Identities = 131/165 (79%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 341 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 520
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 521 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 700
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 701 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 835
Score = 254 bits (550), Expect(3) = 7e-082
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -3
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 837 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 658
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 657 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 478
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 477 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 340
Score = 87.2 bits (184), Expect(2) = 1e-026
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 721 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 542
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 541 LHARHSSEENWHNSGTVLG 485
Score = 69.8 bits (146), Expect(3) = e-123
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 236 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 343
Score = 61.1 bits (127), Expect(3) = 7e-082
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 342 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 208
Score = 60.6 bits (126), Expect(3) = e-123
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +2
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 149 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 244
Score = 56.5 bits (117), Expect(2) = 1e-026
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 243 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 148
Score = 28.6 bits (56), Expect(3) = 7e-082
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1 / -2
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPR 10
QVA+P H A+ +A+ VE + RPR
Sbjct: 232 QVAIPTSTPHGARGIASTVESCMCFIPRPR 143
>gb|DR093057.1|DR093057 STRR1_5_F06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_F06_A033 5', mRNA sequence
Length = 884
Score = 349 bits (756), Expect(3) = e-122
Identities = 130/165 (78%), Positives = 146/165 (88%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 324 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 503
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 504 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 683
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTS SWN P W+FGQTF GK FRV*
Sbjct: 684 STVLVGQSLSFRITGSDRRTSISWNIVPPNWEFGQTFSGKQFRV* 818
Score = 253 bits (547), Expect(3) = 9e-082
Identities = 110/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ++EV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 820 NQTLNCFPEKVWPNSQFGGTMFQDMEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 641
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 640 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 461
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 460 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 323
Score = 87.2 bits (184), Expect(2) = 1e-026
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 704 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 525
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 524 LHARHSSEENWHNSGTVLG 468
Score = 69.8 bits (146), Expect(3) = e-122
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 219 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 326
Score = 61.1 bits (127), Expect(3) = 9e-082
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 325 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 191
Score = 60.6 bits (126), Expect(3) = e-122
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 132 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 227
Score = 56.5 bits (117), Expect(2) = 1e-026
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 226 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 131
Score = 29.5 bits (58), Expect(3) = 9e-082
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -1
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 215 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 123
>gb|DR070152.1|DR070152 RTDK1_11_D01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_11_D01_A029 5', mRNA sequence
Length = 748
Score = 352 bits (762), Expect(3) = e-121
Identities = 131/165 (79%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 176 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 355
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 356 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 535
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 536 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 670
Score = 254 bits (550), Expect(2) = 5e-079
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 672 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 493
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 492 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 313
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 312 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 175
Score = 87.2 bits (184), Expect(2) = 1e-024
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 556 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 377
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 376 LHARHSSEENWHNSGTVLG 320
Score = 69.8 bits (146), Expect(3) = e-121
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 71 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 178
Score = 61.1 bits (127), Expect(2) = 5e-079
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 177 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 43
Score = 53.3 bits (110), Expect(3) = e-121
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +1 / +2
Query: 34 ATFYGGSDAFGFMGGACGYGNL*QPG 111
ATFYGGSDA G MGGACGYGNL G
Sbjct: 2 ATFYGGSDASGTMGGACGYGNLYSQG 79
Score = 49.2 bits (101), Expect(2) = 1e-024
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLPYPQAPP+ P+ASLPP* VA
Sbjct: 78 PWLYRLPYPQAPPMVPEASLPP*KVA 1
>gb|DT636492.1|DT636492 EST1151423 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMGS45 3' end, mRNA sequence
Length = 833
Score = 350 bits (759), Expect(3) = e-120
Identities = 131/165 (79%), Positives = 146/165 (88%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 186 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 365
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR S K + TGW+P+SRNWGQNWQ
Sbjct: 366 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSAKGSQTGWIPLSRNWGQNWQC 545
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFRVT SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 546 STVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 680
Score = 255 bits (551), Expect(2) = 3e-079
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL VT KE PTR L CQFWPQFLD G H
Sbjct: 682 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVTLKERLCPTRTVLHCQFWPQFLDNGIH 503
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV L T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 502 PVWLPFALTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 323
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 322 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 185
Score = 90.9 bits (192), Expect(2) = 1e-025
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 566 LPDQDGAALPILAPVSGQWNPPGLATLRAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 387
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 386 LHARHSSEENWHNSGTVLG 330
Score = 69.8 bits (146), Expect(3) = e-120
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 81 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 188
Score = 61.1 bits (127), Expect(2) = 3e-079
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 187 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 53
Score = 53.3 bits (110), Expect(3) = e-120
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +1 / +3
Query: 34 ATFYGGSDAFGFMGGACGYGNL*QPG 111
ATFYGGSDA G MGGACGYGNL G
Sbjct: 12 ATFYGGSDASGTMGGACGYGNLYSQG 89
Score = 49.2 bits (101), Expect(2) = 1e-025
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLPYPQAPP+ P+ASLPP* VA
Sbjct: 88 PWLYRLPYPQAPPMVPEASLPP*KVA 11
>gb|CX649475.1|CX649475 COLD1_35_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_35_B04_A029 5', mRNA sequence
Length = 670
Score = 340 bits (736), Expect(3) = e-119
Identities = 126/157 (80%), Positives = 141/157 (89%)
Frame = +2 / +1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 199 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 378
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 379 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 558
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
+ +LVGQ+LSFRVT SDRRTSTSWN P W+FGQTF
Sbjct: 559 STVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTF 669
Score = 248 bits (536), Expect(2) = 4e-077
Identities = 108/157 (68%), Positives = 116/157 (73%)
Frame = -1 / -3
Query: 684 KVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLA 505
KVWPN Q G FQ+VEV RSL VT KE PTR L CQFWPQFLD G HPV TL
Sbjct: 668 KVWPNSQFGGTMFQDVEVLRSLPVTLKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLT 489
Query: 504 RTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSK 325
T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK
Sbjct: 488 LTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSK 309
Query: 324 CGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 308 WGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 198
Score = 91.3 bits (193), Expect(2) = 9e-028
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 579 LPDQDGAALPILAPVSGQWNPPGLATLHAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 400
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 399 LHARHSSEENWHNSGTVLG 343
Score = 69.8 bits (146), Expect(3) = e-119
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 94 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 201
Score = 61.1 bits (127), Expect(2) = 4e-077
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 200 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 66
Score = 58.8 bits (122), Expect(3) = e-119
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 19 AHATFYGGSDASGTMGGACGYGNLYSQG 102
Score = 55.6 bits (115), Expect(2) = 9e-028
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRGR 12
P +RLPYPQAPP+ P+ASLPP* VACA + +
Sbjct: 101 PWLYRLPYPQAPPMVPEASLPP*KVACASSKAQ 3
>gb|DR099166.1|DR099166 STRR1_53_C12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_53_C12_A033 5', mRNA sequence
Length = 823
Score = 352 bits (762), Expect(3) = e-116
Identities = 131/165 (79%), Positives = 147/165 (89%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 159 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 338
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 339 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 518
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 519 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 653
Score = 254 bits (550), Expect(2) = 5e-079
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -1
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 655 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 476
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 475 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 296
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 295 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 158
Score = 87.2 bits (184), Expect(2) = 2e-021
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -3
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 539 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 360
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 359 LHARHSSEENWHNSGTVLG 303
Score = 69.8 bits (146), Expect(3) = e-116
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 54 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 161
Score = 61.1 bits (127), Expect(2) = 5e-079
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 160 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 26
Score = 38.6 bits (78), Expect(2) = 2e-021
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASL 51
P +RLPYPQAPP+ P+ASL
Sbjct: 61 PWLYRLPYPQAPPMVPEASL 2
Score = 37.7 bits (76), Expect(3) = e-116
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 52 SDAFGFMGGACGYGNL*QPG 111
SDA G MGGACGYGNL G
Sbjct: 3 SDASGTMGGACGYGNLYSQG 62
>gb|DR096273.1|DR096273 STRR1_26_H05.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_26_H05_A033 5', mRNA sequence
Length = 801
Score = 327 bits (708), Expect(3) = e-115
Identities = 120/154 (77%), Positives = 137/154 (88%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 339 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 518
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 519 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 698
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFG 676
+ +LVGQ+LSFR+T SD +TSTSWN P W+FG
Sbjct: 699 STVLVGQSLSFRITGSDPQTSTSWNIVPPNWEFG 800
Score = 232 bits (502), Expect(3) = 1e-075
Identities = 103/154 (66%), Positives = 111/154 (72%)
Frame = -1 / -3
Query: 675 PNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTT 496
PN Q G FQ+VEV SL V KE PTR L CQFWPQFLD G HPV TL T
Sbjct: 799 PNSQFGGTMFQDVEVCGSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTK 620
Query: 495 SPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGR 316
SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK GR
Sbjct: 619 SPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGR 440
Query: 315 GGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
GGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 439 GGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 338
Score = 87.2 bits (184), Expect(2) = 1e-026
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 719 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 540
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 539 LHARHSSEENWHNSGTVLG 483
Score = 69.8 bits (146), Expect(3) = e-115
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 234 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 341
Score = 61.1 bits (127), Expect(3) = 1e-075
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 340 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 206
Score = 60.6 bits (126), Expect(3) = e-115
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 147 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 242
Score = 56.5 bits (117), Expect(2) = 1e-026
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 241 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 146
Score = 29.5 bits (58), Expect(3) = 1e-075
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -2
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 230 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 138
>gb|DR055148.1|DR055148 RTCA1_21_G09.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_G09_A029 5', mRNA sequence
Length = 722
Score = 321 bits (695), Expect(3) = e-114
Identities = 119/148 (80%), Positives = 134/148 (90%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 273 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 452
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 453 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 632
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAP 658
+ +LVGQ+LSFR+T SDRRTSTSWN P
Sbjct: 633 STVLVGQSLSFRITGSDRRTSTSWNIVP 716
Score = 231 bits (498), Expect(3) = 4e-075
Identities = 101/148 (68%), Positives = 109/148 (73%)
Frame = -1 / -2
Query: 657 GAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPAT 478
G FQ+VEV RSL V KE PTR L CQFWPQFLD G HPV TL T SPAPAT
Sbjct: 715 GTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPAT 536
Query: 477 FVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQP 298
FV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQP
Sbjct: 535 FVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQP 356
Query: 297 PSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
P S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 355 PLSLGRA*LGGQKLVAVTKIEGLPG*HH 272
Score = 88.6 bits (187), Expect(2) = 3e-027
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 653 LPDQDGAALPILAPVSGQWNPPGLATLHAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 474
Query: 415 LAARHPAVGDGHDAGAVLG 359
L AR+ + + H++G VLG
Sbjct: 473 LHARYSSEENWHNSGTVLG 417
Score = 69.8 bits (146), Expect(3) = e-114
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 168 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 275
Score = 61.1 bits (127), Expect(3) = 4e-075
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 274 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 140
Score = 60.6 bits (126), Expect(3) = e-114
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 81 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 176
Score = 56.5 bits (117), Expect(2) = 3e-027
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 175 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 80
Score = 29.5 bits (58), Expect(3) = 4e-075
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -1
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 164 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 72
>gb|CX652556.1|CX652556 COLD1_59_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_59_H02_A029 5', mRNA sequence
Length = 699
Score = 352 bits (763), Expect(3) = e-112
Identities = 132/165 (80%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 134 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 313
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 314 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 493
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFRVT SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 494 STVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 628
Score = 257 bits (556), Expect(2) = 7e-080
Identities = 112/166 (67%), Positives = 121/166 (72%)
Frame = -1 / -1
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL VT KE PTR L CQFWPQFLD G H
Sbjct: 630 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVTLKERLCPTRTVLHCQFWPQFLDNGIH 451
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 450 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 271
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 270 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 133
Score = 69.8 bits (146), Expect(3) = e-112
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 29 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 136
Score = 61.1 bits (127), Expect(2) = 7e-080
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 135 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 1
Score = 25.4 bits (49), Expect(3) = e-112
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1 / +2
Query: 76 GACGYGNL*QPG 111
GACGYGNL G
Sbjct: 2 GACGYGNLYSQG 37
>gb|DR098553.1|DR098553 STRR1_46_F12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_46_F12_A033 3', mRNA sequence
Length = 697
Score = 352 bits (763), Expect(4) = e-112
Identities = 132/165 (80%), Positives = 147/165 (89%)
Frame = +2 / -1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 541 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 362
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 361 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 182
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFRVT SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 181 STVLVGQSLSFRVTGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 47
Score = 257 bits (556), Expect(3) = 2e-076
Identities = 112/166 (67%), Positives = 121/166 (72%)
Frame = -1 / +3
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL VT KE PTR L CQFWPQFLD G H
Sbjct: 45 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVTLKERLCPTRTVLHCQFWPQFLDNGIH 224
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 225 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 404
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 405 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 542
Score = 91.3 bits (193), Expect(2) = 4e-022
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3 / +2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 161 LPDQDGAALPILAPVSGQWNPPGLATLHAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 340
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 341 LHARHSSEENWHNSGTVLG 397
Score = 38.2 bits (77), Expect(4) = e-112
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 158 GLRCGACFEIRCEEQPGW 211
GL CGACFEI+C P W
Sbjct: 592 GLSCGACFEIKCVNDPEW 539
Score = 37.7 bits (76), Expect(3) = 2e-076
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1 / +2
Query: 159 PSSNSAVLSAALFTPYPWLSQVAVPAGP 76
P+ N AVL+AA TPYPWL ++ P P
Sbjct: 590 PAVNRAVLNAAD*TPYPWLYRLPYPQAP 673
Score = 37.7 bits (76), Expect(4) = e-112
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +1 / -2
Query: 52 SDAFGFMGGACGYGNL*QPG 111
SDA G MGGACGYGNL G
Sbjct: 696 SDASGTMGGACGYGNLYSQG 637
Score = 36.8 bits (74), Expect(2) = 4e-022
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 110 PGCHRLPYPQAPPIKPKAS 54
P +RLPYPQAPP+ P+AS
Sbjct: 638 PWLYRLPYPQAPPMVPEAS 694
Score = 35.9 bits (72), Expect(4) = e-112
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / -2
Query: 104 SQGYGVNNAALSTALFDEG 160
SQGYGV +AALSTALF G
Sbjct: 645 SQGYGVQSAALSTALFTAG 589
Score = 30.9 bits (61), Expect(3) = 2e-076
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +3
Query: 210 HPGCSSHLISKHAPQRSP 157
H G +HLISK APQ SP
Sbjct: 540 HSGSFTHLISKQAPQLSP 593
>gb|DR051531.1|DR051531 RTBOR1_30_E09.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_30_E09_A029 5', mRNA sequence
Length = 798
Score = 310 bits (672), Expect(3) = e-111
Identities = 116/143 (81%), Positives = 131/143 (91%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 368 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 547
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 548 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 727
Query: 575 NAILVGQALSFRVTASDRRTSTS 643
+ +LVGQ+LSFR+T SDRRTSTS
Sbjct: 728 STVLVGQSLSFRITGSDRRTSTS 796
Score = 226 bits (487), Expect(3) = 1e-073
Identities = 99/144 (68%), Positives = 107/144 (74%)
Frame = -1 / -1
Query: 645 QEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVIS 466
Q+VEV RSL V KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+
Sbjct: 798 QDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMR 619
Query: 465 TRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSE 286
TRLKY KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S
Sbjct: 618 TRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSL 439
Query: 285 GSA*LGGQKLVAVTRMEGLPGRHH 214
G A*LGGQKLVAVT++EGLPG HH
Sbjct: 438 GRA*LGGQKLVAVTKIEGLPG*HH 367
Score = 87.2 bits (184), Expect(2) = 1e-026
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -3
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 748 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 569
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 568 LHARHSSEENWHNSGTVLG 512
Score = 69.8 bits (146), Expect(3) = e-111
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 263 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 370
Score = 61.1 bits (127), Expect(3) = 1e-073
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 369 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 235
Score = 60.6 bits (126), Expect(3) = e-111
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +2
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 176 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 271
Score = 56.5 bits (117), Expect(2) = 1e-026
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 270 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 175
Score = 29.5 bits (58), Expect(3) = 1e-073
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 259 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 167
>gb|CO362158.1|CO362158 RTK1_1_E05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_E05_A029 5', mRNA sequence
Length = 764
Score = 352 bits (762), Expect(2) = e-109
Identities = 131/165 (79%), Positives = 147/165 (89%)
Frame = +2 / +1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 121 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 300
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 301 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 480
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 481 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 615
Score = 254 bits (550), Expect(2) = 2e-075
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -1
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 617 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 438
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 437 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 258
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 257 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 120
Score = 66.1 bits (138), Expect(2) = e-109
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2 / +1
Query: 98 CDSQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
C ++ YGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 10 CTARVYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 123
Score = 49.2 bits (101), Expect(2) = 2e-075
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVA 91
H G +HLISK APQ SP N AVL+AA TPY QVA
Sbjct: 122 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYTLAVQVA 3
>gb|DR011619.1|DR011619 HEAT1_6_G09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_G09_A029 5', mRNA sequence
Length = 783
Score = 297 bits (644), Expect(3) = e-107
Identities = 110/137 (80%), Positives = 125/137 (91%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 372 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 551
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 552 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 731
Query: 575 NAILVGQALSFRVTASD 625
+ +LVGQ+LSFR+T SD
Sbjct: 732 STVLVGQSLSFRITGSD 782
Score = 215 bits (464), Expect(3) = 2e-070
Identities = 94/137 (68%), Positives = 101/137 (73%)
Frame = -1 / -3
Query: 624 SLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRK 445
SL V KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+ TRLKY K
Sbjct: 781 SLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTRLKYLK 602
Query: 444 PLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGG 265
PL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LGG
Sbjct: 601 PLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LGG 422
Query: 264 QKLVAVTRMEGLPGRHH 214
QKLVAVT++EGLPG HH
Sbjct: 421 QKLVAVTKIEGLPG*HH 371
Score = 88.6 bits (187), Expect(2) = 4e-027
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 752 LPDQDGAALPILAPVSGQWNPPGLATLHAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 573
Query: 415 LAARHPAVGDGHDAGAVLG 359
L AR+ + + H++G VLG
Sbjct: 572 LHARYSSEENWHNSGTVLG 516
Score = 69.8 bits (146), Expect(3) = e-107
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 267 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 374
Score = 61.1 bits (127), Expect(3) = 2e-070
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 373 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 239
Score = 60.6 bits (126), Expect(3) = e-107
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 180 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 275
Score = 56.5 bits (117), Expect(2) = 4e-027
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 274 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 179
Score = 29.5 bits (58), Expect(3) = 2e-070
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -2
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 263 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 171
>gb|DR024833.1|DR024833 STRS1_67_F03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_67_F03_A034 5', mRNA sequence
Length = 778
Score = 297 bits (644), Expect(3) = e-107
Identities = 110/137 (80%), Positives = 125/137 (91%)
Frame = +2 / +1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 367 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 546
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 547 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 726
Query: 575 NAILVGQALSFRVTASD 625
+ +LVGQ+LSFR+T SD
Sbjct: 727 STVLVGQSLSFRITGSD 777
Score = 215 bits (464), Expect(3) = 2e-070
Identities = 94/137 (68%), Positives = 101/137 (73%)
Frame = -1 / -3
Query: 624 SLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRK 445
SL V KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+ TRLKY K
Sbjct: 776 SLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTRLKYLK 597
Query: 444 PLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGG 265
PL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LGG
Sbjct: 596 PLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LGG 417
Query: 264 QKLVAVTRMEGLPGRHH 214
QKLVAVT++EGLPG HH
Sbjct: 416 QKLVAVTKIEGLPG*HH 366
Score = 91.3 bits (193), Expect(2) = 6e-028
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 747 LPDQDGAALPILAPVSGQWNPPGLATLHAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 568
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 567 LHARHSSEENWHNSGTVLG 511
Score = 69.8 bits (146), Expect(3) = e-107
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 262 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 369
Score = 61.1 bits (127), Expect(3) = 2e-070
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 368 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 234
Score = 60.6 bits (126), Expect(3) = e-107
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 175 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 270
Score = 56.5 bits (117), Expect(2) = 6e-028
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 269 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 174
Score = 29.5 bits (58), Expect(3) = 2e-070
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -2
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 258 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 166
>gb|CF668487.1|CF668487 RTCNT1_36_F12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_F12_A029 5', mRNA sequence
Length = 755
Score = 297 bits (644), Expect(3) = e-107
Identities = 110/137 (80%), Positives = 125/137 (91%)
Frame = +2 / +1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 343 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 522
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 523 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 702
Query: 575 NAILVGQALSFRVTASD 625
+ +LVGQ+LSFR+T SD
Sbjct: 703 STVLVGQSLSFRITGSD 753
Score = 217 bits (469), Expect(3) = 4e-071
Identities = 95/138 (68%), Positives = 102/138 (73%)
Frame = -1 / -1
Query: 627 RSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYR 448
RSL V KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+ TRLKY
Sbjct: 755 RSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTRLKYL 576
Query: 447 KPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LG 268
KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LG
Sbjct: 575 KPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LG 396
Query: 267 GQKLVAVTRMEGLPGRHH 214
GQKLVAVT++EGLPG HH
Sbjct: 395 GQKLVAVTKIEGLPG*HH 342
Score = 87.2 bits (184), Expect(2) = 9e-027
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -3
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 723 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 544
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 543 LHARHSSEENWHNSGTVLG 487
Score = 69.8 bits (146), Expect(3) = e-107
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 238 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 345
Score = 61.1 bits (127), Expect(3) = 4e-071
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 344 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 210
Score = 60.6 bits (126), Expect(3) = e-107
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 151 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 246
Score = 56.5 bits (117), Expect(2) = 9e-027
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 245 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 150
Score = 29.5 bits (58), Expect(3) = 4e-071
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 234 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 142
>gb|CF386013.1|CF386013 RTDR1_7_F11.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_7_F11_A015 5', mRNA
sequence
Length = 773
Score = 294 bits (637), Expect(3) = e-106
Identities = 109/137 (79%), Positives = 124/137 (90%)
Frame = +2 / +1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 361 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 540
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGA D+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 541 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAXDLVRVSVKGSQTGWIPLSRNWGQNWQC 720
Query: 575 NAILVGQALSFRVTASD 625
+ +LVGQ+LSFR+T SD
Sbjct: 721 STVLVGQSLSFRITGSD 771
Score = 213 bits (460), Expect(3) = 7e-070
Identities = 94/138 (68%), Positives = 101/138 (73%)
Frame = -1 / -1
Query: 627 RSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYR 448
RSL V KE PTR L CQFWPQFLD G HPV TL T S APATFV+ TRLKY
Sbjct: 773 RSLPVILKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSXAPATFVMRTRLKYL 594
Query: 447 KPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LG 268
KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LG
Sbjct: 593 KPLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LG 414
Query: 267 GQKLVAVTRMEGLPGRHH 214
GQKLVAVT++EGLPG HH
Sbjct: 413 GQKLVAVTKIEGLPG*HH 360
Score = 87.2 bits (184), Expect(2) = 9e-027
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -3
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 741 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 562
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 561 LHARHSSEENWHNSGTVLG 505
Score = 69.8 bits (146), Expect(3) = e-106
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 256 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 363
Score = 61.1 bits (127), Expect(3) = 7e-070
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 362 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 228
Score = 60.6 bits (126), Expect(3) = e-106
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 169 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 264
Score = 56.5 bits (117), Expect(2) = 9e-027
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 263 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 168
Score = 29.5 bits (58), Expect(3) = 7e-070
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 252 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 160
>gb|DR095411.1|DR095411 STRR1_20_G09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_20_G09_A033 5', mRNA sequence
Length = 853
Score = 284 bits (614), Expect(3) = e-104
Identities = 108/155 (69%), Positives = 127/155 (81%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPNYALP+D+GGWCNPP HFD+A P F +A YR+GIVP+ +RRVPC +
Sbjct: 337 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVR 516
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 517 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 696
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+V+ SD RT TS+NAAP+ WQFGQTFEG F
Sbjct: 697 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 801
Score = 174 bits (375), Expect(2) = 3e-054
Identities = 85/149 (57%), Positives = 92/149 (61%)
Frame = -1 / -3
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GAA EV V SL +T KE P + L CQF PQ D+G PVL L
Sbjct: 791 PSNVWPNCQFAGAAL*EVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLEPLM 612
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HGT GTMP Y A G A
Sbjct: 611 ETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG*AM 432
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A*LGG + VAVT
Sbjct: 431 SKCWRGGLHHPPLSLGRA*LGGHRFVAVT 345
Score = 76.7 bits (161), Expect(3) = e-104
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC++++C +Q RWC PG ++ T
Sbjct: 211 SQGYGTNTAALSTALFNNGATCGACYQMKCNDQSDPRWCLPGTVTVTAT 357
Score = 58.8 bits (122), Expect(3) = e-104
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 136 AHATFYGGSDASGTMGGACGYGNLYSQG 219
Score = 58.3 bits (121), Expect(2) = 3e-054
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -1 / -3
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHHR S H I APQ +P SAVL AA+F P PWL ++ P P
Sbjct: 338 VPGRHHRGSD*SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAP 183
>gb|DR021085.1|DR021085 STRS1_42_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_F09_A034 3', mRNA sequence
Length = 848
Score = 284 bits (614), Expect(3) = e-104
Identities = 108/155 (69%), Positives = 127/155 (81%)
Frame = +2 / -3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPNYALP+D+GGWCNPP HFD+A P F +A YR+GIVP+ +RRVPC +
Sbjct: 495 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVR 316
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 315 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 136
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+V+ SD RT TS+NAAP+ WQFGQTFEG F
Sbjct: 135 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 31
Score = 174 bits (375), Expect(2) = 3e-054
Identities = 85/149 (57%), Positives = 92/149 (61%)
Frame = -1 / +2
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GAA EV V SL +T KE P + L CQF PQ D+G PVL L
Sbjct: 41 PSNVWPNCQFAGAAL*EVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLEPLM 220
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HGT GTMP Y A G A
Sbjct: 221 ETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG*AM 400
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A*LGG + VAVT
Sbjct: 401 SKCWRGGLHHPPLSLGRA*LGGHRFVAVT 487
Score = 76.7 bits (161), Expect(3) = e-104
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / -3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC++++C +Q RWC PG ++ T
Sbjct: 621 SQGYGTNTAALSTALFNNGATCGACYQMKCNDQSDPRWCLPGTVTVTAT 475
Score = 58.8 bits (122), Expect(3) = e-104
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / -3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 696 AHATFYGGSDASGTMGGACGYGNLYSQG 613
Score = 58.3 bits (121), Expect(2) = 3e-054
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -1 / +2
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHHR S H I APQ +P SAVL AA+F P PWL ++ P P
Sbjct: 494 VPGRHHRGSD*SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAP 649
>gb|CF668294.1|CF668294 RTCNT1_35_D04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_35_D04_A029 5', mRNA sequence
Length = 751
Score = 284 bits (614), Expect(3) = e-104
Identities = 108/155 (69%), Positives = 127/155 (81%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPNYALP+D+GGWCNPP HFD+A P F +A YR+GIVP+ +RRVPC +
Sbjct: 205 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQLAIYRSGIVPIIFRRVPCVR 384
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 385 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 564
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+V+ SD RT TS+NAAP+ WQFGQTFEG F
Sbjct: 565 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 669
Score = 173 bits (372), Expect(2) = 4e-053
Identities = 84/149 (56%), Positives = 92/149 (61%)
Frame = -1 / -3
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GAA +V V SL +T KE P + L CQF PQ D+G PVL L
Sbjct: 659 PSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLEPLM 480
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HGT GTMP Y A G A
Sbjct: 479 ETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIASC*KAG*AM 300
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A*LGG + VAVT
Sbjct: 299 SKCWRGGLHHPPLSLGRA*LGGHRFVAVT 213
Score = 76.7 bits (161), Expect(3) = e-104
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC++++C +Q RWC PG ++ T
Sbjct: 79 SQGYGTNTAALSTALFNNGATCGACYQMKCNDQSDPRWCLPGTVTVTAT 225
Score = 58.8 bits (122), Expect(3) = e-104
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 4 AHATFYGGSDASGTMGGACGYGNLYSQG 87
Score = 56.1 bits (116), Expect(2) = 4e-053
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = -1 / -3
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHHR S H I AP +P SAVL AA+F P PWL ++ P P
Sbjct: 206 VPGRHHRGSD*SLHFIW*QAPHVAPLLKSAVLRAAVFVP*PWLYKLPYPHAP 51
>gb|CF471926.1|CF471926 RTDS1_7_A08.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A08_A015 5', mRNA sequence
Length = 751
Score = 283 bits (612), Expect(3) = e-104
Identities = 108/155 (69%), Positives = 126/155 (81%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPNYALP+D+GGWCNPP HFD+A P F A YR+GIVP+ +RRVPC +
Sbjct: 252 TVTVTATNLCPPNYALPNDNGGWCNPPLQHFDMAQPAFQQFAIYRSGIVPIIFRRVPCVR 431
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 432 KGGVRFTINGNSYFNLVLITNVGGAGDVEAVSIKGSNTGWQPMSRNWGQNWQSNSYLNGQ 611
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+V+ SD RT TS+NAAP+ WQFGQTFEG F
Sbjct: 612 SLSFQVSTSDGRTITSYNAAPANWQFGQTFEGLQF 716
Score = 172 bits (371), Expect(2) = 1e-053
Identities = 84/149 (56%), Positives = 92/149 (61%)
Frame = -1 / -1
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GAA +V V SL +T KE P + L CQF PQ D+G PVL L
Sbjct: 706 PSNVWPNCQFAGAAL*DVMVLPSLVLTWKERLCPFK*ELLCQFCPQLRDIGCQPVLEPLM 527
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HGT GTMP Y A G A
Sbjct: 526 ETASTSPAPPTLVMSTKLK*EFPLIVNRTPPFLTHGTLLNMIGTMPLLYIANC*KAG*AM 347
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A*LGG + VAVT
Sbjct: 346 SKCWRGGLHHPPLSLGRA*LGGHRFVAVT 260
Score = 76.7 bits (161), Expect(3) = e-104
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC++++C +Q RWC PG ++ T
Sbjct: 126 SQGYGTNTAALSTALFNNGATCGACYQMKCNDQSDPRWCLPGTVTVTAT 272
Score = 58.8 bits (122), Expect(3) = e-104
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 51 AHATFYGGSDASGTMGGACGYGNLYSQG 134
Score = 58.3 bits (121), Expect(2) = 1e-053
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -1 / -1
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHHR S H I APQ +P SAVL AA+F P PWL ++ P P
Sbjct: 253 VPGRHHRGSD*SLHFIW*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAP 98
>gb|BX254474.1|BX254474 BX254474 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP099A09 similar to POLLEN ALLERGEN, mRNA
sequence
Length = 697
Score = 351 bits (761), Expect(2) = e-104
Identities = 130/165 (78%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 71 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 250
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 251 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 430
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FR+*
Sbjct: 431 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRI* 565
Score = 254 bits (549), Expect(2) = 4e-071
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+Q L P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 567 NQILNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 388
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 387 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 208
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S GSA*LGGQKLVAVT++EGLPG HH
Sbjct: 207 RKIGMERSKWGRGGLHQPPLSLGSA*LGGQKLVAVTKIEGLPG*HH 70
Score = 47.3 bits (97), Expect(2) = e-104
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 140 TALFDEGLRCGACFEIRCEEQPGW 211
TALF+ GL CGACFEI+C P W
Sbjct: 2 TALFNSGLSCGACFEIKCVNDPEW 73
Score = 35.0 bits (70), Expect(2) = 4e-071
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAV 139
H G +HLISK APQ SP N AV
Sbjct: 72 HSGSFTHLISKQAPQLSPLLNRAV 1
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMA338 5' end, mRNA sequence
Length = 817
Score = 291 bits (630), Expect(3) = e-104
Identities = 112/156 (71%), Positives = 129/156 (82%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
SI+VTATNFCPPN ALP+D+GGWCNPP HFDL+ P+F HIA++RAGIVPV YRRVPC++
Sbjct: 287 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 466
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVLITNV GAGDV SVK A TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 467 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 646
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFR 703
+LSF+VT SD +T TS+N A S WQFGQTF G+ +
Sbjct: 647 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGEQMK 754
Score = 200 bits (431), Expect(3) = 2e-060
Identities = 94/152 (61%), Positives = 103/152 (67%)
Frame = -1 / -2
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
P+KVWPNCQ+L A EV V SL VT KE P+R L CQFWPQF D+G PVLA LT
Sbjct: 741 PAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLT 562
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ TRLKY PL+V R PP L GT TGT+PAR AM G R
Sbjct: 561 ETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSER 382
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
SKC RGGLHQPP S GSA LGGQKLVAVT +E
Sbjct: 381 SKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 286
Score = 69.3 bits (145), Expect(3) = e-104
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF+ G CGAC+EI+C + P W
Sbjct: 167 SQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAW 274
Score = 57.0 bits (118), Expect(3) = e-104
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 92 AHATFYGGGDATGTMGGACGYGNLYSQG 175
Score = 43.7 bits (89), Expect(3) = 2e-060
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLP PQAPPI P AS PP*NVA
Sbjct: 174 PWLYRLP*PQAPPIVPVASPPP*NVA 97
Score = 28.6 bits (56), Expect(3) = 2e-060
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CS PRC R+PGC
Sbjct: 203 CSEPRCWYRSPGC 165
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK45 5' end, mRNA sequence
Length = 778
Score = 291 bits (630), Expect(3) = e-104
Identities = 112/156 (71%), Positives = 129/156 (82%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
SI+VTATNFCPPN ALP+D+GGWCNPP HFDL+ P+F HIA++RAGIVPV YRRVPC++
Sbjct: 287 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 466
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVLITNV GAGDV SVK A TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 467 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 646
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFR 703
+LSF+VT SD +T TS+N A S WQFGQTF G+ +
Sbjct: 647 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAGEQMK 754
Score = 200 bits (431), Expect(3) = 2e-060
Identities = 94/152 (61%), Positives = 103/152 (67%)
Frame = -1 / -2
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
P+KVWPNCQ+L A EV V SL VT KE P+R L CQFWPQF D+G PVLA LT
Sbjct: 741 PAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLT 562
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ TRLKY PL+V R PP L GT TGT+PAR AM G R
Sbjct: 561 ETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSER 382
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
SKC RGGLHQPP S GSA LGGQKLVAVT +E
Sbjct: 381 SKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 286
Score = 69.3 bits (145), Expect(3) = e-104
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF+ G CGAC+EI+C + P W
Sbjct: 167 SQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAW 274
Score = 57.0 bits (118), Expect(3) = e-104
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 92 AHATFYGGGDATGTMGGACGYGNLYSQG 175
Score = 43.7 bits (89), Expect(3) = 2e-060
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLP PQAPPI P AS PP*NVA
Sbjct: 174 PWLYRLP*PQAPPIVPVASPPP*NVA 97
Score = 28.6 bits (56), Expect(3) = 2e-060
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CS PRC R+PGC
Sbjct: 203 CSEPRCWYRSPGC 165
>gb|DR080162.1|DR080162 RTFEPL1_20_E11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_20_E11_A029 5', mRNA sequence
Length = 740
Score = 287 bits (621), Expect(3) = e-104
Identities = 106/131 (80%), Positives = 120/131 (91%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 348 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 527
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 528 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 707
Query: 575 NAILVGQALSF 607
+ +LVGQ+LSF
Sbjct: 708 STVLVGQSLSF 740
Score = 211 bits (456), Expect(3) = 2e-069
Identities = 91/131 (69%), Positives = 98/131 (74%)
Frame = -1 / -2
Query: 606 KESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNR 427
KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+ TRLKY KPL+VN
Sbjct: 739 KERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNL 560
Query: 426 TPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAV 247
TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LGGQKLVAV
Sbjct: 559 TPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAV 380
Query: 246 TRMEGLPGRHH 214
T++EGLPG HH
Sbjct: 379 TKIEGLPG*HH 347
Score = 87.2 bits (184), Expect(2) = 9e-027
Identities = 36/79 (45%), Positives = 50/79 (63%)
Frame = -3 / -1
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 728 LPDQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPL 549
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 548 LHARHSSEENWHNSGTVLG 492
Score = 69.8 bits (146), Expect(3) = e-104
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 243 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 350
Score = 61.1 bits (127), Expect(3) = 2e-069
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 349 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 215
Score = 60.6 bits (126), Expect(3) = e-104
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 156 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 251
Score = 56.5 bits (117), Expect(2) = 9e-027
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 250 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 155
Score = 29.5 bits (58), Expect(3) = 2e-069
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -1
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 239 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 147
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
sequence
Length = 765
Score = 290 bits (627), Expect(3) = e-103
Identities = 112/152 (73%), Positives = 127/152 (83%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
SI+VTATNFCPPN ALP+D+GGWCNPP HFDL+ P+F HIA++RAGIVPV YRRVPC++
Sbjct: 308 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 487
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVLITNV GAGDV SVK A TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 488 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 667
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD +T TS+N A S WQFGQTF G
Sbjct: 668 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAG 763
Score = 200 bits (431), Expect(3) = 2e-060
Identities = 94/152 (61%), Positives = 103/152 (67%)
Frame = -1 / -1
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
P+KVWPNCQ+L A EV V SL VT KE P+R L CQFWPQF D+G PVLA LT
Sbjct: 762 PAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLT 583
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ TRLKY PL+V R PP L GT TGT+PAR AM G R
Sbjct: 582 ETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSER 403
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
SKC RGGLHQPP S GSA LGGQKLVAVT +E
Sbjct: 402 SKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 307
Score = 69.3 bits (145), Expect(3) = e-103
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF+ G CGAC+EI+C + P W
Sbjct: 188 SQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAW 295
Score = 57.0 bits (118), Expect(3) = e-103
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 113 AHATFYGGGDATGTMGGACGYGNLYSQG 196
Score = 43.7 bits (89), Expect(3) = 2e-060
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLP PQAPPI P AS PP*NVA
Sbjct: 195 PWLYRLP*PQAPPIVPVASPPP*NVA 118
Score = 28.6 bits (56), Expect(3) = 2e-060
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 140 CSAPRCSRRTPGC 102
CS PRC R+PGC
Sbjct: 224 CSEPRCWYRSPGC 186
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADO50 3' end, mRNA sequence
Length = 902
Score = 290 bits (627), Expect(3) = e-103
Identities = 112/152 (73%), Positives = 127/152 (83%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
SI+VTATNFCPPN ALP+D+GGWCNPP HFDL+ P+F HIA++RAGIVPV YRRVPC++
Sbjct: 344 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 523
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVLITNV GAGDV SVK A TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 524 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 703
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD +T TS+N A S WQFGQTF G
Sbjct: 704 SLSFKVTTSDGKTVTSYNVASSNWQFGQTFAG 799
Score = 200 bits (431), Expect(3) = 2e-060
Identities = 94/152 (61%), Positives = 103/152 (67%)
Frame = -1 / -3
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
P+KVWPNCQ+L A EV V SL VT KE P+R L CQFWPQF D+G PVLA LT
Sbjct: 798 PAKVWPNCQLLEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLT 619
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ TRLKY PL+V R PP L GT TGT+PAR AM G R
Sbjct: 618 ETASTSPAPPTLVMRTRLKYE*PLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSER 439
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVTRME 235
SKC RGGLHQPP S GSA LGGQKLVAVT +E
Sbjct: 438 SKCSRGGLHQPPLSLGSALLGGQKLVAVTTIE 343
Score = 68.4 bits (143), Expect(3) = e-103
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF+ G CGAC+EI+C + P W
Sbjct: 224 SQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPQW 331
Score = 57.0 bits (118), Expect(3) = e-103
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 149 AHATFYGGGDATGTMGGACGYGNLYSQG 232
Score = 43.7 bits (89), Expect(3) = 2e-060
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -3
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLP PQAPPI P AS PP*NVA
Sbjct: 231 PWLYRLP*PQAPPIVPVASPPP*NVA 154
Score = 28.6 bits (56), Expect(3) = 2e-060
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 140 CSAPRCSRRTPGC 102
CS PRC R+PGC
Sbjct: 260 CSEPRCWYRSPGC 222
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_42_B01_A029 5', mRNA sequence
Length = 862
Score = 289 bits (626), Expect(3) = e-103
Identities = 111/156 (71%), Positives = 129/156 (82%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I+VTATNFCPPN ALP++ GGWCNPP HFDL+ P+F HIA++RAGIVPV Y+RVPC +
Sbjct: 352 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 531
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
SGG+RFT+NG YFNLVLITNV GAGDV S+K + TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 532 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 711
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFR 703
+LSF+VT SD RT TS+NAAPS WQFGQTF G R
Sbjct: 712 SLSFKVTTSDGRTVTSYNAAPSNWQFGQTFAGAQIR 819
Score = 195 bits (420), Expect(2) = 5e-059
Identities = 91/149 (61%), Positives = 97/149 (65%)
Frame = -1 / -3
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
P+KVWPNCQ+LGAA EV V SL VT KE P R L CQFWPQ D+G HPVL
Sbjct: 806 PAKVWPNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFM 627
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
TSPAP T V+ TRLKY P VNR PPDL GT TGTMPA A+ G R
Sbjct: 626 ETAWTSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSER 447
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLHQPP+ GSA LGGQKLVAVT
Sbjct: 446 SKCWRGGLHQPPALLGSALLGGQKLVAVT 360
Score = 68.4 bits (143), Expect(3) = e-103
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG + AALSTALF+ GL CGACF IRC + P W
Sbjct: 232 SQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQW 339
Score = 57.0 bits (118), Expect(3) = e-103
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 157 AHATFYGGGDASGTMGGACGYGNLYSQG 240
Score = 53.8 bits (111), Expect(2) = 5e-059
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H I+K APQ P SAVL AA+ PYPWL ++ P P
Sbjct: 338 HCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PHAP 204
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAD27 5' end, mRNA sequence
Length = 886
Score = 279 bits (603), Expect(3) = e-102
Identities = 107/155 (69%), Positives = 123/155 (79%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPN ALP+D+GGWCNPP HFD+A P F HIA YR+GIVP+ +RRVPC +
Sbjct: 354 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIAIYRSGIVPIMFRRVPCVR 533
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW MSRNWGQNWQSN+ L GQ
Sbjct: 534 KGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNWQSNSYLNGQ 713
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
LSF+VT SD R TS+N AP+ WQFGQTFEG F
Sbjct: 714 TLSFQVTTSDGRIITSYNVAPANWQFGQTFEGLQF 818
Score = 172 bits (370), Expect(2) = 2e-052
Identities = 83/149 (55%), Positives = 92/149 (61%)
Frame = -1 / -1
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GA EV + SL VT KE P + L CQF PQ D+ PVL L
Sbjct: 808 PSNVWPNCQFAGATL*EVMILPSLVVTWKERVCPFK*ELLCQFCPQLRDIACQPVLDPLM 629
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HGT GT+P Y A+ G A
Sbjct: 628 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMAIC*KAG*AM 449
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A LGGQ+LVAVT
Sbjct: 448 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 362
Score = 74.8 bits (157), Expect(3) = e-102
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC+E++C Q +WC PG ++ T
Sbjct: 228 SQGYGTNTAALSTALFNNGSTCGACYEMKCNHQSDPQWCLPGTVTVTAT 374
Score = 58.8 bits (122), Expect(3) = e-102
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 153 AHATFYGGSDASGTMGGACGYGNLYSQG 236
Score = 54.7 bits (113), Expect(2) = 2e-052
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = -1 / -1
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHH H IS APQ P SAVL AA+F P PWL ++ P P
Sbjct: 355 VPGRHH*GSDWWLHFIS*QAPQVEPLLKSAVLRAAVFVP*PWLYRLPYPHAP 200
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAI31 5' end, mRNA sequence
Length = 844
Score = 280 bits (605), Expect(3) = e-102
Identities = 107/155 (69%), Positives = 124/155 (80%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPN ALP+D+GGWCNPP HFD+A P F HI YR+GIVP+ +RRVPC +
Sbjct: 335 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIPIYRSGIVPIMFRRVPCVR 514
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW MSRNWGQNWQSN+ L GQ
Sbjct: 515 KGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNWQSNSYLNGQ 694
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
+LSF+VT SD RT TS+N AP+ WQFGQTFEG F
Sbjct: 695 SLSFQVTTSDGRTITSYNVAPANWQFGQTFEGLQF 799
Score = 170 bits (366), Expect(2) = 3e-052
Identities = 83/149 (55%), Positives = 91/149 (61%)
Frame = -1 / -2
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GA EV V SL VT KE P + L CQF PQ D+ PVL L
Sbjct: 789 PSNVWPNCQFAGATL*EVMVLPSLVVTWKERLCPFK*ELLCQFCPQLRDIACQPVLDPLM 610
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HGT GT+P Y + G A
Sbjct: 609 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPFLTHGTLLNMIGTIPLLYMGIC*KAG*AM 430
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A LGGQ+LVAVT
Sbjct: 429 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 343
Score = 73.9 bits (155), Expect(3) = e-102
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC+E++C + +WC PG ++ T
Sbjct: 209 SQGYGTNTAALSTALFNNGASCGACYEMKCNHESDPQWCLPGTVTVTAT 355
Score = 58.8 bits (122), Expect(3) = e-102
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 134 AHATFYGGSDASGTMGGACGYGNLYSQG 217
Score = 56.1 bits (116), Expect(2) = 3e-052
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = -1 / -2
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHH H IS APQ +P SAVL AA+F P PWL ++ P P
Sbjct: 336 VPGRHH*GSDSWLHFIS*QAPQLAPLLKSAVLRAAVFVP*PWLYRLPYPHAP 181
>gb|CO169500.1|CO169500 NDL1_7_B04.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B04_A029 5', mRNA sequence
Length = 810
Score = 281 bits (609), Expect(3) = e-102
Identities = 108/152 (71%), Positives = 125/152 (82%)
Frame = +2 / +1
Query: 230 RPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPC 409
R ++ VTATNFCPPNYALP+D+GGWCNPP HFD+A P FL IA Y+ GIVP+ +RRVPC
Sbjct: 355 RGTVTVTATNFCPPNYALPNDNGGWCNPPLQHFDMAQPAFLQIAIYKGGIVPIMFRRVPC 534
Query: 410 RKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILV 589
+ GGVRFTING YFNLVLITNVA AGDV S+K ++TGW MSRNWGQNWQSN+ L
Sbjct: 535 VRKGGVRFTINGHSYFNLVLITNVADAGDVEAVSIKGSNTGWQEMSRNWGQNWQSNSYLN 714
Query: 590 GQALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
GQ+LSFRVT+SD RT TS+N AP+ WQFGQTF
Sbjct: 715 GQSLSFRVTSSDGRTVTSYNVAPANWQFGQTF 810
Score = 177 bits (382), Expect(2) = 2e-054
Identities = 87/146 (59%), Positives = 93/146 (63%)
Frame = -1 / -2
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
VWPNCQ GA EV V SL VTRKE P + L CQF PQ D+ PVL L
Sbjct: 806 VWPNCQFAGATL*EVTVLPSLLVTRKERLCPFK*ELLCQFCPQLRDISCQPVLEPLMETA 627
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
+TSPA AT V+ST+LK PLIVNRTPP L HGT R GTMP A+ R G A SKC
Sbjct: 626 STSPASATLVMSTKLK*ECPLIVNRTPPFLTHGTLRNIMGTMPPL*MAICRKAG*AMSKC 447
Query: 321 GRGGLHQPPSSEGSA*LGGQKLVAVT 244
RGGLH PP S GSA* GGQKLVAVT
Sbjct: 446 WRGGLHHPPLSLGSA*FGGQKLVAVT 369
Score = 72.1 bits (151), Expect(3) = e-102
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ GL CGAC+E++C + +WC G ++ T
Sbjct: 235 SQGYGTNTAALSTALFNNGLTCGACYEMKCNHESDPQWCLRGTVTVTAT 381
Score = 58.8 bits (122), Expect(3) = e-102
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 160 AHATFYGGSDASGTMGGACGYGNLYSQG 243
Score = 55.6 bits (115), Expect(2) = 2e-054
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = -1 / -2
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+P +HH H IS APQ SP SAVL AA+F PYPWL ++ P P
Sbjct: 362 VPRKHH*GSDSWLHFIS*QAPQVSPLLKSAVLRAAVFVPYPWLYKLP*PHAP 207
>gb|DR090373.1|DR090373 RTAL1_14_D02.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_D02_A029 5', mRNA sequence
Length = 777
Score = 298 bits (645), Expect(4) = e-102
Identities = 111/137 (81%), Positives = 125/137 (91%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 366 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 545
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 546 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 725
Query: 575 NAILVGQALSFRVTASD 625
+ +LVGQ+LSFRVT SD
Sbjct: 726 STVLVGQSLSFRVTGSD 776
Score = 218 bits (470), Expect(3) = 4e-071
Identities = 95/137 (69%), Positives = 102/137 (74%)
Frame = -1 / -3
Query: 624 SLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRK 445
SL VT KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+ TRLKY K
Sbjct: 775 SLPVTLKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTRLKYLK 596
Query: 444 PLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGG 265
PL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LGG
Sbjct: 595 PLMVNLTPPCFTHGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LGG 416
Query: 264 QKLVAVTRMEGLPGRHH 214
QKLVAVT++EGLPG HH
Sbjct: 415 QKLVAVTKIEGLPG*HH 365
Score = 91.3 bits (193), Expect(3) = 5e-023
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -3 / -2
Query: 595 LADEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAG 416
L D+DG LP+LAPV G PPG L A +H VP + H+ D++Q+EV EAV+ E H
Sbjct: 746 LPDQDGAALPILAPVSGQWNPPGLATLHAHSHQVPCSSHICDENQIEVFEAVNGESHSPL 567
Query: 415 LAARHPAVGDGHDAGAVLG 359
L ARH + + H++G VLG
Sbjct: 566 LHARHSSEENWHNSGTVLG 510
Score = 60.6 bits (126), Expect(4) = e-102
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +2
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 176 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 271
Score = 56.5 bits (117), Expect(3) = 4e-071
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 270 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 175
Score = 45.1 bits (92), Expect(4) = e-102
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 143 ALFDEGLRCGACFEIRCEEQPGW 211
ALF+ GL CGACFEI+C P W
Sbjct: 300 ALFNSGLSCGACFEIKCVNDPEW 368
Score = 33.6 bits (67), Expect(3) = 4e-071
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAAL 124
H G +HLISK APQ SP N A L
Sbjct: 367 HSGSFTHLISKQAPQLSPLLNRAAQCCGL 281
Score = 29.5 bits (58), Expect(3) = 5e-023
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 259 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 167
Score = 29.5 bits (58), Expect(3) = 5e-023
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1 / -1
Query: 141 VLSAALFTPYPWLSQVAVPAGP 76
+L+AA TPYPWL ++ P P
Sbjct: 300 LLNAAD*TPYPWLYRLPYPQAP 235
Score = 26.7 bits (52), Expect(4) = e-102
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTAL 148
SQGYGV +AALS+++
Sbjct: 263 SQGYGVQSAALSSSV 307
>gb|DR072178.1|DR072178 RTDK1_24_C09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_24_C09_A029 5', mRNA sequence
Length = 721
Score = 352 bits (762), Expect(2) = e-101
Identities = 131/165 (79%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 56 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 235
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 236 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 415
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 416 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 550
Score = 254 bits (550), Expect(2) = 5e-070
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 552 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 373
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 372 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 193
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 192 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 55
Score = 38.2 bits (77), Expect(2) = e-101
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 158 GLRCGACFEIRCEEQPGW 211
GL CGACFEI+C P W
Sbjct: 5 GLSCGACFEIKCVNDPEW 58
Score = 30.9 bits (61), Expect(2) = 5e-070
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSP 157
H G +HLISK APQ SP
Sbjct: 57 HSGSFTHLISKQAPQLSP 4
>gb|CO200976.1|CO200976 RTCNT2_2_G03.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_G03_A029 5', mRNA sequence
Length = 676
Score = 352 bits (762), Expect(2) = e-101
Identities = 131/165 (79%), Positives = 147/165 (89%)
Frame = +2 / +2
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 71 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 250
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 251 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 430
Query: 575 NAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNFRV* 709
+ +LVGQ+LSFR+T SDRRTSTSWN P W+FGQTF GK FRV*
Sbjct: 431 STVLVGQSLSFRITGSDRRTSTSWNIVPPNWEFGQTFSGKQFRV* 565
Score = 254 bits (550), Expect(2) = 5e-070
Identities = 111/166 (66%), Positives = 120/166 (72%)
Frame = -1 / -2
Query: 711 HQTLKFLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSH 532
+QTL P KVWPN Q G FQ+VEV RSL V KE PTR L CQFWPQFLD G H
Sbjct: 567 NQTLNCFPEKVWPNSQFGGTMFQDVEVLRSLPVILKERLCPTRTVLHCQFWPQFLDNGIH 388
Query: 531 PVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMW 352
PV TL T SPAPATFV+ TRLKY KPL+VN TPP HGT TGT+PARYSA+
Sbjct: 387 PVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCFTHGTLLKRTGTIPARYSAIL 208
Query: 351 RNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EGLPG HH
Sbjct: 207 RKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEGLPG*HH 70
Score = 38.2 bits (77), Expect(2) = e-101
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 158 GLRCGACFEIRCEEQPGW 211
GL CGACFEI+C P W
Sbjct: 20 GLSCGACFEIKCVNDPEW 73
Score = 30.9 bits (61), Expect(2) = 5e-070
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSP 157
H G +HLISK APQ SP
Sbjct: 72 HSGSFTHLISKQAPQLSP 19
>gb|DR120696.1|DR120696 RTMG1_31_G12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_G12_A029 3', mRNA sequence
Length = 865
Score = 273 bits (590), Expect(3) = e-101
Identities = 104/155 (67%), Positives = 122/155 (78%)
Frame = +2 / -1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPN ALP+D+GGWCNPP HFD+A P F IA YR+GIVP+ +RR+PC +
Sbjct: 484 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQQIAIYRSGIVPIMFRRIPCVR 305
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW MSRNWGQNWQSN+ L GQ
Sbjct: 304 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 125
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
LSF+V+ SD R TS+N AP+ WQFGQTFEG F
Sbjct: 124 TLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 20
Score = 171 bits (369), Expect(2) = 3e-055
Identities = 82/149 (55%), Positives = 91/149 (61%)
Frame = -1 / +3
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GA EV + SL +T KE P + L CQF PQ D+ PVL L
Sbjct: 30 PSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLM 209
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HG GTMP Y A+ G A
Sbjct: 210 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIC*KAGCAM 389
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A LGGQ+LVAVT
Sbjct: 390 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 476
Score = 76.7 bits (161), Expect(3) = e-101
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / -1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC+E++C +Q +WC PG ++ T
Sbjct: 610 SQGYGTNTAALSTALFNNGATCGACYEMKCNDQSDSQWCLPGTVTVTAT 464
Score = 64.3 bits (134), Expect(2) = 3e-055
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -1 / +3
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHH S H IS APQ +P SAVL AA+F PYPWL ++ P P
Sbjct: 483 VPGRHH*ESDWSLHFIS*QAPQVAPLLKSAVLRAAVFVPYPWLYKLPYPHAP 638
Score = 58.8 bits (122), Expect(3) = e-101
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / -1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 685 AHATFYGGSDASGTMGGACGYGNLYSQG 602
>gb|CF391890.1|CF391890 RTDR3_10_G01.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_10_G01_A022 5', mRNA
sequence
Length = 746
Score = 278 bits (601), Expect(3) = e-101
Identities = 102/126 (80%), Positives = 115/126 (91%)
Frame = +2 / +1
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 367 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 546
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 547 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQC 726
Query: 575 NAILVG 592
+ +LVG
Sbjct: 727 STVLVG 744
Score = 209 bits (450), Expect(3) = 2e-068
Identities = 89/126 (70%), Positives = 96/126 (76%)
Frame = -1 / -1
Query: 591 PTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDL 412
PTR L CQFWPQFLD G HPV TL T SPAPATFV+ TRLKY KPL+VN TPP
Sbjct: 743 PTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVMRTRLKYLKPLMVNLTPPCF 564
Query: 411 RHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEG 232
HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EG
Sbjct: 563 THGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEG 384
Query: 231 LPGRHH 214
LPG HH
Sbjct: 383 LPG*HH 366
Score = 85.8 bits (181), Expect(2) = 2e-026
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = -3 / -3
Query: 589 DEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAGLA 410
D++G LP+LAPV G PPG L +H VP + H+ D++Q+EV EAV+ E H L
Sbjct: 741 DQNGAALPILAPVSGQWNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPLLH 562
Query: 409 ARHPAVGDGHDAGAVLG 359
ARH + + H++G VLG
Sbjct: 561 ARHSSEENWHNSGTVLG 511
Score = 69.8 bits (146), Expect(3) = e-101
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 262 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 369
Score = 61.1 bits (127), Expect(3) = 2e-068
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 368 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 234
Score = 60.6 bits (126), Expect(3) = e-101
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +1
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 175 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 270
Score = 56.5 bits (117), Expect(2) = 2e-026
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 269 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 174
Score = 29.5 bits (58), Expect(3) = 2e-068
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 258 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 166
>gb|CX648930.1|CX648930 COLD1_31_H02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_H02_A029 5', mRNA sequence
Length = 857
Score = 272 bits (589), Expect(3) = e-101
Identities = 104/155 (67%), Positives = 122/155 (78%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPN ALP+D+GGWCNPP HFD+A P F IA YR+GIVP+ +RR+PC +
Sbjct: 376 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQKIAIYRSGIVPIMFRRIPCVR 555
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW MSRNWGQNWQSN+ L GQ
Sbjct: 556 EGGVRFTINGHSYFNLVLITNVGGAGDVEAVSIKGSNTGWQTMSRNWGQNWQSNSYLNGQ 735
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEGKNF 700
LSF+V+ SD R TS+N AP+ WQFGQTFEG F
Sbjct: 736 TLSFQVSTSDGRIITSYNVAPANWQFGQTFEGVQF 840
Score = 173 bits (372), Expect(2) = 4e-054
Identities = 82/149 (55%), Positives = 92/149 (61%)
Frame = -1 / -1
Query: 690 PSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALT 511
PS VWPNCQ GA EV + SL +T KE P + L CQF PQ D+ PVL L
Sbjct: 830 PSNVWPNCQFAGATL*EVMILPSLVLTWKERVCPFK*ELLCQFCPQLRDIVCQPVLEPLM 651
Query: 510 LARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMAR 331
+TSPAP T V+ST+LK PLIVNRTPP L HG GTMP Y A++ G A
Sbjct: 650 ETASTSPAPPTLVMSTKLK*ECPLIVNRTPPSLTHGILLNMIGTMPLLYMAIF*KAGCAM 471
Query: 330 SKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
SKC RGGLH PP S G A LGGQ+LVAVT
Sbjct: 470 SKCWRGGLHHPPLSLGRAELGGQRLVAVT 384
Score = 76.7 bits (161), Expect(3) = e-101
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC+E++C +Q +WC PG ++ T
Sbjct: 250 SQGYGTNTAALSTALFNNGATCGACYEMKCNDQSDSQWCLPGTVTVTAT 396
Score = 59.3 bits (123), Expect(2) = 4e-054
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = -1 / -1
Query: 231 LPGRHHRHPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
+PGRHH S H IS APQ +P SAVL AA+F P PWL ++ P P
Sbjct: 377 VPGRHH*ESDWSLHFIS*QAPQVAPLLKSAVLRAAVFVP*PWLYKLPYPHAP 222
Score = 58.8 bits (122), Expect(3) = e-101
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 175 AHATFYGGSDASGTMGGACGYGNLYSQG 258
>gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_26_G11_A029 5', mRNA sequence
Length = 779
Score = 284 bits (615), Expect(3) = e-101
Identities = 107/157 (68%), Positives = 127/157 (80%)
Frame = +2 / +1
Query: 212 RWCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVS 391
+WC PG PSI++TATNFCPPNYAL +DDGGWCNPPR HFD+AMP F I ++AGIVP+
Sbjct: 307 QWCLPGSPSIVITATNFCPPNYALANDDGGWCNPPREHFDMAMPAFEQIGIWKAGIVPIQ 486
Query: 392 YRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQ 571
Y+RV C K GG+RFTING YF L+L+TNV G G V VK ++TGWLP++RNWGQNWQ
Sbjct: 487 YKRVACVKEGGMRFTINGNYYFYLILVTNVGGDGVVADVKVKGSNTGWLPLTRNWGQNWQ 666
Query: 572 SNAILVGQALSFRVTASDRRTSTSWNAAPSTWQFGQT 682
SN+IL GQALSF+VT+S RT TS+N APS WQFGQT
Sbjct: 667 SNSILKGQALSFQVTSSGGRTVTSYNVAPSDWQFGQT 777
Score = 190 bits (410), Expect(2) = 4e-058
Identities = 90/157 (57%), Positives = 97/157 (61%)
Frame = -1 / -1
Query: 684 KVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLA 505
KV PNCQ GA EV VR L VT KE A P RM LDCQF PQFL GSHPV T
Sbjct: 779 KVCPNCQSEGATL*EVTVRPPLEVT*KERACPLRMLLDCQFCPQFLVRGSHPVFDPFTFT 600
Query: 504 RTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSK 325
T+P+P TFV R K PL+VN PP H T GT+PA + N G+A SK
Sbjct: 599 SATTPSPPTFVTRMR*K**LPLMVNLIPPSFTHATLLYWIGTIPAFQMPICSNAGIAMSK 420
Query: 324 CGRGGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
C RGGLH PPSS A*LGGQKLVAV +EGLPGRHH
Sbjct: 419 CSRGGLHHPPSSFARA*LGGQKLVAVMTIEGLPGRHH 309
Score = 68.9 bits (144), Expect(3) = e-101
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF+ G CGACFEI+C + P W
Sbjct: 205 SQGYGTNTAALSTALFNSGASCGACFEIKCVDDPQW 312
Score = 55.1 bits (114), Expect(2) = 4e-058
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGPA 73
H G S+H ISKHAPQ +P AVL AA+ PYP L ++ P PA
Sbjct: 311 HCGSSTHFISKHAPQDAPLLKRAVLRAAVLVPYP*LYKLP*PQAPA 174
Score = 54.7 bits (113), Expect(3) = e-101
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG+DA G M GACGYGNL G
Sbjct: 130 AHATFYGGADAAGTMAGACGYGNLYSQG 213
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
Length = 998
Score = 277 bits (599), Expect(3) = e-101
Identities = 106/152 (69%), Positives = 122/152 (80%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATNFCPPN ALP+D+GGWCNPP HFD+A P FL IA+YR GIVP+ Y RVPC +
Sbjct: 384 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 563
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFT+NG YFNLVLITNV GAGDV S+K + +GW PMSRNWGQNWQSN+ L GQ
Sbjct: 564 KGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQ 743
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD RT S N APS WQFGQTFEG
Sbjct: 744 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEG 839
Score = 178 bits (383), Expect(3) = 2e-063
Identities = 84/151 (55%), Positives = 91/151 (60%)
Frame = -1 / -2
Query: 696 FLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAA 517
+LPSKVWPNCQ GA E VR SL VT E P R L CQF PQ DMG P+L
Sbjct: 844 WLPSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLLDP 665
Query: 516 LTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGM 337
TSPAP T V+STRLKY P V R PP L+ GT * GT+P Y A++R G
Sbjct: 664 FMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGS 485
Query: 336 ARSKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
A SKC GGLH PP S G A GGQKLVAVT
Sbjct: 484 AISKCCSGGLHHPPLSLGRALFGGQKLVAVT 392
Score = 71.6 bits (150), Expect(3) = e-101
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF++GL CGAC+E+RC + P W
Sbjct: 264 SQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQW 371
Score = 58.8 bits (122), Expect(3) = e-101
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 189 AHATFYGGSDASGTMGGACGYGNLYSQG 272
Score = 52.4 bits (108), Expect(3) = 2e-063
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H IS APQ SPS AVL AA+F P PWL ++ P P
Sbjct: 370 HWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAP 236
Score = 51.5 bits (106), Expect(3) = 2e-063
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2 / -2
Query: 98 RLPYPQAPPIKPKASLPP*NVACA 27
RLPYPQAPPI P+ASLPP*NVA A
Sbjct: 259 RLPYPQAPPIVPEASLPP*NVAWA 188
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 277 bits (599), Expect(3) = e-101
Identities = 106/152 (69%), Positives = 122/152 (80%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATNFCPPN ALP+D+GGWCNPP HFD+A P FL IA+YR GIVP+ Y RVPC +
Sbjct: 233 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFT+NG YFNLVLITNV GAGDV S+K + +GW PMSRNWGQNWQSN+ L GQ
Sbjct: 413 KGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSMSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD RT S N APS WQFGQTFEG
Sbjct: 593 SLSFQVTTSDGRTIVSNNVAPSNWQFGQTFEG 688
Score = 176 bits (379), Expect(3) = 8e-063
Identities = 83/151 (54%), Positives = 91/151 (60%)
Frame = -1 / -3
Query: 696 FLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAA 517
+LPSKVWPNCQ GA E VR SL VT E P R L CQF PQ DMG P++
Sbjct: 693 WLPSKVWPNCQFEGATLFETIVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLIDP 514
Query: 516 LTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGM 337
TSPAP T V+STRLKY P V R PP L+ GT * GT+P Y A++R G
Sbjct: 513 FMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGS 334
Query: 336 ARSKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
A SKC GGLH PP S G A GGQKLVAVT
Sbjct: 333 AISKCCSGGLHHPPLSLGRALFGGQKLVAVT 241
Score = 71.6 bits (150), Expect(3) = e-101
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF++GL CGAC+E+RC + P W
Sbjct: 113 SQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQW 220
Score = 58.8 bits (122), Expect(3) = e-101
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 38 AHATFYGGSDASGTMGGACGYGNLYSQG 121
Score = 52.4 bits (108), Expect(3) = 8e-063
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H IS APQ SPS AVL AA+F P PWL ++ P P
Sbjct: 219 HWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAP 85
Score = 51.5 bits (106), Expect(3) = 8e-063
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2 / -3
Query: 98 RLPYPQAPPIKPKASLPP*NVACA 27
RLPYPQAPPI P+ASLPP*NVA A
Sbjct: 108 RLPYPQAPPIVPEASLPP*NVAWA 37
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
Length = 919
Score = 277 bits (599), Expect(3) = e-101
Identities = 106/152 (69%), Positives = 122/152 (80%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATNFCPPN ALP+D+GGWCNPP HFD+A P FL IA+YR GIVP+ Y RVPC +
Sbjct: 233 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFT+NG YFNLVLITNV GAGDV S+K + +GW PMSRNWGQNWQSN+ L GQ
Sbjct: 413 KGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD RT S N APS WQFGQTFEG
Sbjct: 593 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEG 688
Score = 178 bits (383), Expect(3) = 2e-063
Identities = 84/151 (55%), Positives = 91/151 (60%)
Frame = -1 / -2
Query: 696 FLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAA 517
+LPSKVWPNCQ GA E VR SL VT E P R L CQF PQ DMG P+L
Sbjct: 693 WLPSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLLDP 514
Query: 516 LTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGM 337
TSPAP T V+STRLKY P V R PP L+ GT * GT+P Y A++R G
Sbjct: 513 FMETAWTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGS 334
Query: 336 ARSKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
A SKC GGLH PP S G A GGQKLVAVT
Sbjct: 333 AISKCCSGGLHHPPLSLGRALFGGQKLVAVT 241
Score = 71.6 bits (150), Expect(3) = e-101
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF++GL CGAC+E+RC + P W
Sbjct: 113 SQGYGTNTAALSTALFNDGLSCGACYEMRCNDDPQW 220
Score = 58.8 bits (122), Expect(3) = e-101
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 38 AHATFYGGSDASGTMGGACGYGNLYSQG 121
Score = 52.4 bits (108), Expect(3) = 2e-063
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H IS APQ SPS AVL AA+F P PWL ++ P P
Sbjct: 219 HWGSSLHRIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAP 85
Score = 51.5 bits (106), Expect(3) = 2e-063
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2 / -2
Query: 98 RLPYPQAPPIKPKASLPP*NVACA 27
RLPYPQAPPI P+ASLPP*NVA A
Sbjct: 108 RLPYPQAPPIVPEASLPP*NVAWA 37
>gb|DR685073.1|DR685073 EST1075150 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAZ77 3' end, mRNA sequence
Length = 848
Score = 276 bits (598), Expect(3) = e-100
Identities = 106/150 (70%), Positives = 122/150 (81%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATN CPPN ALP+D+GGWCNPP HFD+A P F HIA YR+GIVP+ +RRVPC +
Sbjct: 399 TVTVTATNLCPPNSALPNDNGGWCNPPLQHFDMAQPAFQHIATYRSGIVPIIFRRVPCVR 578
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GGVRFTING YFNLVLITNV GAGDV S+K ++TGW MSRNWGQNWQSN+ L GQ
Sbjct: 579 KGGVRFTINGHPYFNLVLITNVGGAGDVEAVSIKGSNTGWQAMSRNWGQNWQSNSYLNGQ 758
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTF 685
ALSF+VT SD RT TS+N AP+ WQFGQTF
Sbjct: 759 ALSFQVTTSDGRTITSYNVAPANWQFGQTF 848
Score = 169 bits (363), Expect(2) = 1e-050
Identities = 83/146 (56%), Positives = 91/146 (62%)
Frame = -1 / -2
Query: 681 VWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLAR 502
VWPNCQ GA EV V SL VT K+ A P + L CQF PQ D+ PVL L
Sbjct: 844 VWPNCQFAGATL*EVMVLPSLVVTWKDRACPFK*ELLCQFCPQLRDIACQPVLEPLMETA 665
Query: 501 TTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKC 322
+TSPAP T V+ST+LK PLIVNRTPP L HGT GTMP Y A+ G A SKC
Sbjct: 664 STSPAPPTLVMSTKLK*GCPLIVNRTPPFLTHGTLLKMIGTMPLLYVAIC*KAG*AMSKC 485
Query: 321 GRGGLHQPPSSEGSA*LGGQKLVAVT 244
RGGLH PP S G A LGGQ+LVAVT
Sbjct: 484 WRGGLHHPPLSLGRAELGGQRLVAVT 407
Score = 71.6 bits (150), Expect(3) = e-100
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGWRWCRPGRPSILVT 250
SQGYG N AALSTALF+ G CGAC++++C +WC PG ++ T
Sbjct: 273 SQGYGTNTAALSTALFNNGATCGACYQMKCNHHSDPQWCLPGTVTVTAT 419
Score = 58.8 bits (122), Expect(3) = e-100
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 198 AHATFYGGSDASGTMGGACGYGNLYSQG 281
Score = 54.7 bits (113), Expect(2) = 1e-050
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACA 27
P ++LPYP APPI P ASLPP*NVACA
Sbjct: 280 PWLYKLPYPHAPPIVPDASLPP*NVACA 197
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
Length = 891
Score = 277 bits (599), Expect(3) = e-100
Identities = 106/152 (69%), Positives = 122/152 (80%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ VTATNFCPPN ALP+D+GGWCNPP HFD+A P FL IA+YR GIVP+ Y RVPC +
Sbjct: 233 TVTVTATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFT+NG YFNLVLITNV GAGDV S+K + +GW PMSRNWGQNWQSN+ L GQ
Sbjct: 413 KGGIRFTVNGHSYFNLVLITNVGGAGDVNAVSIKGSRSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD RT S N APS WQFGQTFEG
Sbjct: 593 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEG 688
Score = 175 bits (376), Expect(3) = 2e-062
Identities = 83/151 (54%), Positives = 90/151 (59%)
Frame = -1 / -1
Query: 696 FLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAA 517
+LPS VWPNCQ GA E VR SL VT E P R L CQF PQ DMG P+L
Sbjct: 693 WLPSNVWPNCQFEGATLFETTVRPSLVVTWNERLCPLR*ELLCQFCPQLRDMGCQPLLDP 514
Query: 516 LTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGM 337
TSPAP T V+STRLKY P V R PP L+ GT * GT+P Y A++R G
Sbjct: 513 FMETALTSPAPPTLVMSTRLKYEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGS 334
Query: 336 ARSKCGRGGLHQPPSSEGSA*LGGQKLVAVT 244
A SKC GGLH PP S G A GGQKLVAVT
Sbjct: 333 AISKCCSGGLHHPPLSLGRALFGGQKLVAVT 241
Score = 69.8 bits (146), Expect(3) = e-100
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF++GL CGAC+E++C + P W
Sbjct: 113 SQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQW 220
Score = 58.8 bits (122), Expect(3) = e-100
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 38 AHATFYGGSDASGTMGGACGYGNLYSQG 121
Score = 52.8 bits (109), Expect(3) = 2e-062
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H IS APQ SPS AVL AA+F P PWL ++ P P
Sbjct: 219 HWGSSLHCIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAP 85
Score = 51.5 bits (106), Expect(3) = 2e-062
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2 / -1
Query: 98 RLPYPQAPPIKPKASLPP*NVACA 27
RLPYPQAPPI P+ASLPP*NVA A
Sbjct: 108 RLPYPQAPPIVPEASLPP*NVAWA 37
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_E12_A029 5', mRNA sequence
Length = 812
Score = 280 bits (606), Expect(3) = e-100
Identities = 107/148 (72%), Positives = 125/148 (84%)
Frame = +2 / +3
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I+VTATNFCPPN ALP++ GGWCNPP HFDL+ P+F HIA++RAGIVPV Y+RVPC +
Sbjct: 369 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 548
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
SGG+RFT+NG YFNLVLITNV GAGDV S+K + TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 549 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 728
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQ 679
+LSF+VT SD RT TS+NAAPS WQFGQ
Sbjct: 729 SLSFKVTTSDGRTVTSYNAAPSNWQFGQ 812
Score = 187 bits (403), Expect(2) = 1e-056
Identities = 88/145 (60%), Positives = 93/145 (64%)
Frame = -1 / -2
Query: 678 WPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLART 499
WPNCQ+LGAA EV V SL VT KE P R L CQFWPQ D+G HPVL
Sbjct: 811 WPNCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAW 632
Query: 498 TSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCG 319
TSPAP T V+ TRLKY P VNR PPDL GT TGTMPA A+ G RSKC
Sbjct: 631 TSPAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCW 452
Query: 318 RGGLHQPPSSEGSA*LGGQKLVAVT 244
RGGLHQPP+ GSA LGGQKLVAVT
Sbjct: 451 RGGLHQPPALLGSALLGGQKLVAVT 377
Score = 68.4 bits (143), Expect(3) = e-100
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG + AALSTALF+ GL CGACF IRC + P W
Sbjct: 249 SQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQW 356
Score = 57.0 bits (118), Expect(3) = e-100
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +3
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 174 AHATFYGGGDASGTMGGACGYGNLYSQG 257
Score = 53.8 bits (111), Expect(2) = 1e-056
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H I+K APQ P SAVL AA+ PYPWL ++ P P
Sbjct: 355 HCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PHAP 221
>gb|DR120128.1|DR120128 RTMG1_27_E05.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_27_E05_A029 5', mRNA sequence
Length = 754
Score = 274 bits (593), Expect(3) = e-100
Identities = 101/126 (80%), Positives = 114/126 (90%)
Frame = +2 / +3
Query: 215 WCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSY 394
WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV +
Sbjct: 375 WCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVLF 554
Query: 395 RRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQS 574
RRVPC K GGVRFTINGF+YFNLVLITNVAGA D+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 555 RRVPCVKQGGVRFTINGFKYFNLVLITNVAGARDLVRVSVKGSQTGWIPLSRNWGQNWQC 734
Query: 575 NAILVG 592
+ +LVG
Sbjct: 735 STVLVG 752
Score = 204 bits (441), Expect(3) = 3e-067
Identities = 88/126 (69%), Positives = 95/126 (75%)
Frame = -1 / -1
Query: 591 PTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDL 412
PTR L CQFWPQFLD G HPV TL T S APATFV+ TRLKY KPL+VN TPP
Sbjct: 751 PTRTVLHCQFWPQFLDKGIHPVWLPFTLTLTKSLAPATFVMRTRLKYLKPLMVNLTPPCF 572
Query: 411 RHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSSEGSA*LGGQKLVAVTRMEG 232
HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S G A*LGGQKLVAVT++EG
Sbjct: 571 THGTLLKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLSLGRA*LGGQKLVAVTKIEG 392
Query: 231 LPGRHH 214
LPG HH
Sbjct: 391 LPG*HH 374
Score = 89.5 bits (189), Expect(2) = 2e-027
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 589 DEDGVGLPVLAPVPGHGQPPGAGRLDARAHHVPRAGHVRDQHQVEVPEAVDCEPHPAGLA 410
D++G LP+LAPV G G PPG L +H VP + H+ D++Q+EV EAV+ E H L
Sbjct: 749 DQNGAALPILAPVSGQGNPPGLATLHTHSHQVPCSSHICDENQIEVFEAVNGESHSPLLH 570
Query: 409 ARHPAVGDGHDAGAVLG 359
ARH + + H++G VLG
Sbjct: 569 ARHSSEENWHNSGTVLG 519
Score = 69.8 bits (146), Expect(3) = e-100
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +3
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 270 SQGYGVQSAALSTALFNSGLSCGACFEIKCVNDPEW 377
Score = 61.1 bits (127), Expect(3) = 3e-067
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G +HLISK APQ SP N AVL+AA TPYPWL ++ P P
Sbjct: 376 HSGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYPWLYRLPYPQAP 242
Score = 60.6 bits (126), Expect(3) = e-100
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1 / +3
Query: 16 PRRRAHATFYGGSDAFGFMGGACGYGNL*QPG 111
P AHATFYGGSDA G MGGACGYGNL G
Sbjct: 183 PWNEAHATFYGGSDASGTMGGACGYGNLYSQG 278
Score = 56.5 bits (117), Expect(2) = 2e-027
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVACARRRG 15
P +RLPYPQAPP+ P+ASLPP* VACA +G
Sbjct: 277 PWLYRLPYPQAPPMVPEASLPP*KVACASFQG 182
Score = 29.5 bits (58), Expect(3) = 3e-067
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1 / -3
Query: 99 QVAVPAGPAHKAKSVAAAVERGVRASTRPRI 7
QVA+P H A+ +A+ VE + RPR+
Sbjct: 266 QVAIPTSTPHGARGIASTVESCMCFIPRPRL 174
>gb|CO362167.1|CO362167 RTK1_1_F05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_1_F05_A029 5', mRNA sequence
Length = 584
Score = 312 bits (676), Expect(3) = 4e-099
Identities = 116/146 (79%), Positives = 132/146 (90%)
Frame = +2 / +2
Query: 212 RWCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVS 391
+WC PG PSILVTATNFCPPNYALP+D+GGWCNPPRPHFDL+MP+FL +AEYRAGIVPV
Sbjct: 110 QWCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLSMPIFLKMAEYRAGIVPVL 289
Query: 392 YRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQ 571
+ RVPC K GGVRFTINGF+YFNLVLITNVAGAGD+VR SVK + TGW+P+SRNWGQNWQ
Sbjct: 290 FIRVPCVKQGGVRFTINGFKYFNLVLITNVAGAGDLVRVSVKGSQTGWIPLSRNWGQNWQ 469
Query: 572 SNAILVGQALSFRVTASDRRTSTSWN 649
+ +LVGQ+LSF +T SDRRTSTSWN
Sbjct: 470 CSTVLVGQSLSFTITGSDRRTSTSWN 547
Score = 228 bits (493), Expect(2) = 3e-068
Identities = 100/145 (68%), Positives = 108/145 (74%)
Frame = -1 / -3
Query: 648 FQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAPATFVI 469
FQ+VEV RSL V KE PTR L CQFWPQFLD G HPV TL T SPAPATFV+
Sbjct: 546 FQDVEVLRSLPVIVKERLCPTRTVLHCQFWPQFLDNGIHPVWLPFTLTLTKSPAPATFVM 367
Query: 468 STRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPPSS 289
TRLKY KPL+VN TPP HGT TGT+PARYSA+ R +GM RSK GRGGLHQPP S
Sbjct: 366 RTRLKYLKPLMVNLTPPCFTHGTLMKRTGTIPARYSAILRKIGMERSKWGRGGLHQPPLS 187
Query: 288 EGSA*LGGQKLVAVTRMEGLPGRHH 214
G A*LGGQKLVAVT++EGLPG HH
Sbjct: 186 LGRA*LGGQKLVAVTKIEGLPG*HH 112
Score = 65.2 bits (136), Expect(3) = 4e-099
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQ YGV +AALSTALF+ GL CGACFEI+C P W
Sbjct: 8 SQ*YGVQSAALSTALFNSGLSCGACFEIKCVNDPQW 115
Score = 51.0 bits (105), Expect(2) = 3e-068
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWL 103
H G +HLISK APQ SP N AVL+AA TPY WL
Sbjct: 114 HCGSFTHLISKQAPQLSPLLNRAVLNAAD*TPYHWL 7
Score = 24.4 bits (47), Expect(3) = 4e-099
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / +3
Query: 656 PSTWQFGQTF 685
P W+FGQTF
Sbjct: 555 PPNWEFGQTF 584
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
Length = 923
Score = 271 bits (587), Expect(3) = 1e-098
Identities = 104/152 (68%), Positives = 120/152 (78%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
++ +TATNFCPPN ALP+D+GGWCNPP HFD+A P FL IA+YR GIVP+ Y RVPC +
Sbjct: 233 TVTITATNFCPPNNALPNDNGGWCNPPLQHFDMAEPAFLKIAKYRGGIVPILYTRVPCLR 412
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFT+NG FNLVLITNV GAGDV S+K +GW PMSRNWGQNWQSN+ L GQ
Sbjct: 413 KGGIRFTVNGHSCFNLVLITNVGGAGDVHAVSIKGPRSGWQPMSRNWGQNWQSNSYLNGQ 592
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQFGQTFEG 691
+LSF+VT SD RT S N APS WQFGQTFEG
Sbjct: 593 SLSFQVTTSDGRTVVSNNVAPSNWQFGQTFEG 688
Score = 173 bits (373), Expect(3) = 4e-062
Identities = 82/150 (54%), Positives = 90/150 (60%)
Frame = -1 / -3
Query: 696 FLPSKVWPNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAA 517
+LPSKVWPNCQ GA E VR SL VT E P R L CQF PQ DMG P+L
Sbjct: 693 WLPSKVWPNCQFEGATLFETTVRPSLVVTWNERLCPLRYELLCQFCPQLRDMGCQPLLGP 514
Query: 516 LTLARTTSPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGM 337
TSPAP T V+STRLK+ P V R PP L+ GT * GT+P Y A++R G
Sbjct: 513 FMETA*TSPAPPTLVMSTRLKHEWPFTVKRIPPFLKQGTLV*RMGTIPPLYFAIFRKAGS 334
Query: 336 ARSKCGRGGLHQPPSSEGSA*LGGQKLVAV 247
A SKC GGLH PP S G A GGQKLVAV
Sbjct: 333 AISKCCSGGLHHPPLSLGRALFGGQKLVAV 244
Score = 69.8 bits (146), Expect(3) = 1e-098
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF++GL CGAC+E++C + P W
Sbjct: 113 SQGYGTNTAALSTALFNDGLSCGACYEMQCNDDPQW 220
Score = 58.8 bits (122), Expect(3) = 1e-098
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGGSDA G MGGACGYGNL G
Sbjct: 38 AHATFYGGSDASGTMGGACGYGNLYSQG 121
Score = 52.8 bits (109), Expect(3) = 4e-062
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -3
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H IS APQ SPS AVL AA+F P PWL ++ P P
Sbjct: 219 HWGSSLHCIS*QAPQLSPSLKRAVLKAAVFVP*PWL*RLPYPQAP 85
Score = 51.5 bits (106), Expect(3) = 4e-062
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2 / -3
Query: 98 RLPYPQAPPIKPKASLPP*NVACA 27
RLPYPQAPPI P+ASLPP*NVA A
Sbjct: 108 RLPYPQAPPIVPEASLPP*NVAWA 37
>gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_38_A01_A029 5', mRNA sequence
Length = 765
Score = 274 bits (592), Expect(3) = 3e-098
Identities = 104/146 (71%), Positives = 123/146 (84%)
Frame = +2 / +1
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
+I+VTATNFCPPN ALP++ GGWCNPP HFDL+ P+F HIA++RAGIVPV Y+RVPC +
Sbjct: 328 AIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSEPVFQHIAKFRAGIVPVMYQRVPCHR 507
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
SGG+RFT+NG YFNLVLITNV GAGDV S+K + TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 508 SGGIRFTVNGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQ 687
Query: 596 ALSFRVTASDRRTSTSWNAAPSTWQF 673
+LSF+VT SD RT TS+NAAP+ WQF
Sbjct: 688 SLSFKVTTSDGRTVTSYNAAPNNWQF 765
Score = 179 bits (385), Expect(2) = 3e-054
Identities = 86/143 (60%), Positives = 91/143 (63%)
Frame = -1 / -2
Query: 672 NCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTS 493
NCQ+LGAA EV V SL VT KE P R L CQFWPQ D+G HPVL TS
Sbjct: 764 NCQLLGAAL*EVTVLPSLVVTLKERLCPLR*LLLCQFWPQLRDIGCHPVLEPFMETAWTS 585
Query: 492 PAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRG 313
PAP T V+ TRLKY P VNR PPDL GT TGTMPA A+ G RSKC RG
Sbjct: 584 PAPPTLVMRTRLKYECPFTVNRIPPDLWQGTL*YITGTMPALNLAICWKTGSERSKCWRG 405
Query: 312 GLHQPPSSEGSA*LGGQKLVAVT 244
GLHQPP+ GSA LGGQKLVAVT
Sbjct: 404 GLHQPPALLGSALLGGQKLVAVT 336
Score = 68.4 bits (143), Expect(3) = 3e-098
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG + AALSTALF+ GL CGACF IRC + P W
Sbjct: 208 SQGYGTSTAALSTALFNNGLSCGACFAIRCNDDPQW 315
Score = 57.0 bits (118), Expect(3) = 3e-098
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 133 AHATFYGGGDASGTMGGACGYGNLYSQG 216
Score = 53.8 bits (111), Expect(2) = 3e-054
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S H I+K APQ P SAVL AA+ PYPWL ++ P P
Sbjct: 314 HCGSSLHRIAKQAPQLRPLLKSAVLRAAVLVPYPWLYRLP*PHAP 180
>gb|CF402042.1|CF402042 RTWW1_16_F09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_16_F09_A015 5', mRNA sequence
Length = 753
Score = 279 bits (603), Expect(3) = 5e-098
Identities = 107/154 (69%), Positives = 122/154 (79%)
Frame = +2 / +1
Query: 212 RWCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVS 391
+WC PG PSI+VTATNFCPPNYALP+D+GGWCNPPR HFD+AMP F I ++AGIVPV
Sbjct: 292 QWCLPGSPSIVVTATNFCPPNYALPNDNGGWCNPPREHFDMAMPAFEQIGIWKAGIVPVQ 471
Query: 392 YRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQ 571
YRRV C K GG+RFTING YF L+L+TNV G G V VK ++TGWLP+SRNWGQNWQ
Sbjct: 472 YRRVACVKEGGIRFTINGNYYFYLILVTNVGGDGVVADVKVKGSNTGWLPLSRNWGQNWQ 651
Query: 572 SNAILVGQALSFRVTASDRRTSTSWNAAPSTWQF 673
N IL GQALSFRVT+S R TS+N APS WQF
Sbjct: 652 CNTILKGQALSFRVTSSGGRPVTSYNVAPSHWQF 753
Score = 188 bits (404), Expect(2) = 3e-053
Identities = 88/153 (57%), Positives = 96/153 (62%)
Frame = -1 / -2
Query: 672 NCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTS 493
NCQ GA EV R L VTRKE A P RM L CQF PQF GSHPV T T+
Sbjct: 752 NCQWEGATL*EVTGRPPLEVTRKERACPLRMVLHCQFCPQFRLRGSHPVFDPFTFTSATT 573
Query: 492 PAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRG 313
P+P TFV R K PL+VN PP H T TGT+PA + + N G+A SKC RG
Sbjct: 572 PSPPTFVTRMR*K**LPLMVNLIPPSFTHATLLYWTGTIPAFHMPICSNAGIAMSKCSRG 393
Query: 312 GLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
GLHQPP S G A*LGGQKLVAVT +EGLPGRHH
Sbjct: 392 GLHQPPLSLGRA*LGGQKLVAVTTIEGLPGRHH 294
Score = 65.7 bits (137), Expect(3) = 5e-098
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALST LF+ G CG+CFEI+C + P W
Sbjct: 190 SQGYGTNTAALSTVLFNSGASCGSCFEIKCVDDPQW 297
Score = 53.8 bits (111), Expect(3) = 5e-098
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG+DA G M GACGYGNL G
Sbjct: 115 AHATFYGGADASGTMQGACGYGNLYSQG 198
Score = 41.8 bits (85), Expect(2) = 3e-053
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGP 76
H G S+H ISKH PQ +P VL AA+ P P L + P P
Sbjct: 296 HWGSSTHFISKHDPQDAPLLKRTVLRAAVLVP*P*LYKFP*PHAP 162
>gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACC87 3' end, mRNA sequence
Length = 772
Score = 268 bits (580), Expect(3) = 6e-097
Identities = 104/143 (72%), Positives = 120/143 (83%)
Frame = +2 / +2
Query: 236 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 415
SI+VTATNFCPPN ALP+D+GGWCNPP HFDL+ P+F HIA++RAGIVPV YRRVPC++
Sbjct: 341 SIVVTATNFCPPNNALPNDNGGWCNPPLEHFDLSEPVFQHIAKFRAGIVPVQYRRVPCQR 520
Query: 416 SGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQSNAILVGQ 595
GG+RFTING YFNLVLITNV GAGDV SVK A TGW PMSRNWGQNWQSN+ L GQ
Sbjct: 521 KGGIRFTINGHSYFNLVLITNVGGAGDVEAVSVKGAKTGWQPMSRNWGQNWQSNSYLDGQ 700
Query: 596 ALSFRVTASDRRTSTSWNAAPST 664
+LSF+VT SD +T TS+N A +T
Sbjct: 701 SLSFKVTTSDGKTVTSYNVASAT 769
Score = 174 bits (375), Expect(3) = 7e-053
Identities = 86/143 (60%), Positives = 93/143 (65%)
Frame = -1 / -2
Query: 663 VLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTTSPAP 484
V A EV V SL VT KE P+R L CQFWPQF D+G PVLA LT +TSPAP
Sbjct: 768 VAEATL*EVTVFPSLVVTLKERLCPSR*LLLCQFWPQFRDIGCQPVLAPLTETASTSPAP 589
Query: 483 ATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLH 304
T V+ TRLKY PL+V R PP L GT TGT+PAR AM G RSKC RGGLH
Sbjct: 588 PTLVMRTRLKYEWPLMVKRIPPFL*QGTLLY*TGTIPARNLAMC*KTGSERSKCSRGGLH 409
Query: 303 QPPSSEGSA*LGGQKLVAVTRME 235
QPP S GSA LGGQKLVAVT +E
Sbjct: 408 QPPLSLGSALLGGQKLVAVTTIE 340
Score = 69.3 bits (145), Expect(3) = 6e-097
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2 / +2
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALSTALF+ G CGAC+EI+C + P W
Sbjct: 221 SQGYGTNTAALSTALFNNGFSCGACYEIQCNDDPAW 328
Score = 57.0 bits (118), Expect(3) = 6e-097
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHATFYGG DA G MGGACGYGNL G
Sbjct: 146 AHATFYGGGDATGTMGGACGYGNLYSQG 229
Score = 43.7 bits (89), Expect(3) = 7e-053
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 110 PGCHRLPYPQAPPIKPKASLPP*NVA 33
P +RLP PQAPPI P AS PP*NVA
Sbjct: 228 PWLYRLP*PQAPPIVPVASPPP*NVA 151
Score = 28.6 bits (56), Expect(3) = 7e-053
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 140 CSAPRCSRRTPGC 102
CS PRC R+PGC
Sbjct: 257 CSEPRCWYRSPGC 219
>gb|CF386766.1|CF386766 RTDR1_16_C08.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_16_C08_A015 5', mRNA
sequence
Length = 774
Score = 277 bits (600), Expect(3) = 2e-096
Identities = 104/155 (67%), Positives = 124/155 (80%)
Frame = +2 / +1
Query: 212 RWCRPGRPSILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVS 391
+WC PG PS+++TATNFCPPNYAL +D+GGWCNPPR HFD+AMP F IA ++AGIVPV
Sbjct: 310 QWCLPGSPSVVITATNFCPPNYALSNDNGGWCNPPREHFDMAMPAFEQIAIWKAGIVPVQ 489
Query: 392 YRRVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDVVRASVKAASTGWLPMSRNWGQNWQ 571
YRRV C K GG+RFTI+G RYF L+LITNV G GDV VK ++T WLP++RNWGQNWQ
Sbjct: 490 YRRVRCAKGGGIRFTIHGNRYFYLILITNVGGDGDVAEVMVKGSNTDWLPLTRNWGQNWQ 669
Query: 572 SNAILVGQALSFRVTASDRRTSTSWNAAPSTWQFG 676
SN L GQALSF+V++S T TS+N APS WQFG
Sbjct: 670 SNTNLQGQALSFQVSSSSGHTITSYNVAPSDWQFG 774
Score = 169 bits (363), Expect(2) = 8e-051
Identities = 82/154 (53%), Positives = 92/154 (59%)
Frame = -1 / -2
Query: 675 PNCQVLGAAFQEVEVRRSLAVTRKESAWPTRMALDCQFWPQFLDMGSHPVLAALTLARTT 496
PNCQ GA EV V L +T + A P R+ LDCQF PQF GS V T+ T
Sbjct: 773 PNCQSEGATLYEVMVWPLLELT*NDRACPWRLVLDCQFCPQFRVSGSQSVFDPFTITSAT 594
Query: 495 SPAPATFVISTRLKYRKPLIVNRTPPDLRHGTRR*ETGTMPARYSAMWRNMGMARSKCGR 316
SP+P TFVI R K R P +VNR PP L T TGT+PA A+ G+A SKC R
Sbjct: 593 SPSPPTFVIRMR*K*RFP*MVNRIPPPLAQRTLLYWTGTIPAFQMAICSKAGIAMSKCSR 414
Query: 315 GGLHQPPSSEGSA*LGGQKLVAVTRMEGLPGRHH 214
GGLH PP S A*LGGQKLVAV +GLPGRHH
Sbjct: 413 GGLHHPPLSLDRA*LGGQKLVAVITTDGLPGRHH 312
Score = 62.9 bits (131), Expect(3) = 2e-096
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 104 SQGYGVNNAALSTALFDEGLRCGACFEIRCEEQPGW 211
SQGYG N AALS LFD G CGACFEI+C + W
Sbjct: 208 SQGYGTNTAALSAILFDSGAACGACFEIKCVDDSQW 315
Score = 52.4 bits (108), Expect(2) = 8e-051
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = -1 / -2
Query: 210 HPGCSSHLISKHAPQRSPSSNSAVLSAALFTPYPWLSQVAVPAGPA 73
H S+H ISK APQ +P SN LSAA+ PYP L + P PA
Sbjct: 314 HCESSTHFISKQAPQAAPLSNRIALSAAVLVPYP*LYKFPYPQAPA 177
Score = 52.4 bits (108), Expect(3) = 2e-096
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 28 AHATFYGGSDAFGFMGGACGYGNL*QPG 111
AHAT YGG DA G M GACGYGNL G
Sbjct: 133 AHATLYGGGDAAGIMAGACGYGNLYSQG 216
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 440,225,147
Number of Sequences: 355925
Number of extensions: 5881823
Number of successful extensions: 45865
Number of sequences better than 1.0e-020: 333
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 15747145680
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)