TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3922840.2.1
(683 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR692883.1|DR692883 EST1082971 Normalized pine embryo li... 135 3e-031
gb|DT637618.1|DT637618 EST1152549 Normalized pine embryo li... 135 3e-031
gb|CO162222.1|CO162222 FLD1_34_A10.b1_A029 Root flooded Pin... 132 2e-030
gb|CO157911.1|CO157911 FLD1_3_B08.b1_A029 Root flooded Pinu... 132 3e-030
gb|CO157973.1|CO157973 FLD1_3_B08.g1_A029 Root flooded Pinu... 132 3e-030
gb|AW981743.1|AW981743 PC18B07 Pine TriplEx pollen cone lib... 131 4e-030
gb|AW981894.1|AW981894 PC19H10 Pine TriplEx pollen cone lib... 131 4e-030
gb|CO161185.1|CO161185 FLD1_27_E01.b1_A029 Root flooded Pin... 131 4e-030
gb|CO161263.1|CO161263 FLD1_27_E01.g1_A029 Root flooded Pin... 131 4e-030
gb|AW754671.1|AW754671 PC04H11 Pine TriplEx pollen cone lib... 130 8e-030
gb|BX250321.1|BX250321 BX250321 Pinus pinaster differenciat... 130 1e-029
gb|CF472618.1|CF472618 RTDS1_10_A02.g1_A015 Drought-stresse... 130 1e-029
gb|CF666242.1|CF666242 RTCNT1_21_H03.g1_A029 Root control P... 130 1e-029
gb|CO158426.1|CO158426 FLD1_6_G07.g1_A029 Root flooded Pinu... 130 1e-029
gb|CO166223.1|CO166223 FLD1_60_F10.b1_A029 Root flooded Pin... 130 1e-029
gb|DR011636.1|DR011636 HEAT1_7_A06.b1_A029 Root at 37 C for... 130 1e-029
gb|DR013833.1|DR013833 HEAT1_21_G04.g1_A029 Root at 37 C fo... 130 1e-029
gb|DR014717.1|DR014717 HEAT1_51_E10.b1_A029 Root at 37 C fo... 130 1e-029
gb|DR014801.1|DR014801 HEAT1_51_E10.g1_A029 Root at 37 C fo... 130 1e-029
gb|DR047993.1|DR047993 RTBOR1_6_A04.b2_A029 Roots plus adde... 130 1e-029
gb|DR048072.1|DR048072 RTBOR1_6_A04.g2_A029 Roots plus adde... 130 1e-029
gb|DR101834.1|DR101834 STRR1_76_E02.b1_A033 Stem Response R... 130 1e-029
gb|DR101913.1|DR101913 STRR1_76_E02.g1_A033 Stem Response R... 130 1e-029
gb|DR742743.1|DR742743 RTCU1_6_E07.g2_A029 Roots plus added... 130 1e-029
gb|CO164907.1|CO164907 FLD1_51_C04.b1_A029 Root flooded Pin... 129 2e-029
gb|AW754597.1|AW754597 PC04B04 Pine TriplEx pollen cone lib... 128 3e-029
gb|CO174147.1|CO174147 NDL1_42_B09.b1_A029 Needles control ... 127 6e-029
gb|DR016652.1|DR016652 STRS1_11_H07.b1_A034 Shoot tip pitch... 127 6e-029
gb|DR182130.1|DR182130 RTMNUT1_43_C07.b1_A029 Roots minus m... 127 6e-029
gb|DR182211.1|DR182211 RTMNUT1_43_C07.g1_A029 Roots minus m... 127 6e-029
gb|AW754562.1|AW754562 PC03F09 Pine TriplEx pollen cone lib... 124 5e-028
gb|CO167597.1|CO167597 FLD1_70_A07.b1_A029 Root flooded Pin... 124 7e-028
gb|DR384465.1|DR384465 RTHG1_2_A04.g1_A029 Roots plus added... 122 3e-027
gb|AW755049.1|AW755049 PC10B02 Pine TriplEx pollen cone lib... 121 5e-027
gb|AW981559.1|AW981559 PC14A08 Pine TriplEx pollen cone lib... 120 9e-027
gb|CF665776.1|CF665776 RTCNT1_18_H03.b1_A029 Root control P... 119 2e-026
gb|CO197838.1|CO197838 GEO1_9_B05.g1_A029 Root gravitropism... 119 2e-026
gb|CF394511.1|CF394511 RTDS2_6_G10.b1_A021 Drought-stressed... 118 3e-026
gb|DR092274.1|DR092274 RTAL1_28_C09.b1_A029 Roots plus adde... 117 6e-026
gb|CO158346.1|CO158346 FLD1_6_G07.b1_A029 Root flooded Pinu... 102 1e-025
gb|CO163534.1|CO163534 FLD1_42_F03.b1_A029 Root flooded Pin... 114 6e-025
gb|CO163618.1|CO163618 FLD1_42_F03.g1_A029 Root flooded Pin... 114 6e-025
gb|CX712810.1|CX712810 RTPQ1_5_A04.b1_A032 Roots treated wi... 114 8e-025
gb|CX712881.1|CX712881 RTPQ1_5_A04.g1_A032 Roots treated wi... 114 8e-025
gb|CO166280.1|CO166280 FLD1_60_F10.g1_A029 Root flooded Pin... 74 1e-024
gb|DN631232.1|DN631232 EST982048 Subtracted pine embryo lib... 113 1e-024
gb|AW981762.1|AW981762 PC18D09 Pine TriplEx pollen cone lib... 111 4e-024
gb|AW981976.1|AW981976 PC22C08 Pine TriplEx pollen cone lib... 110 1e-023
gb|DN610794.1|DN610794 EST963844 Subtracted pine embryo lib... 108 3e-023
gb|DT628026.1|DT628026 EST1156775 Subtracted pine embryo li... 108 3e-023
gb|AW587726.1|AW587726 ST66A04 Pine TriplEx shoot tip libra... 106 2e-022
gb|AW754768.1|AW754768 PC07F08 Pine TriplEx pollen cone lib... 105 2e-022
gb|BE656756.1|BE656756 NXCI_056_E06_F NXCI (Nsf Xylem Compr... 105 2e-022
gb|BG275492.1|BG275492 NXSI_139_E06_F NXSI (Nsf Xylem Side ... 105 2e-022
gb|AW042801.1|AW042801 ST25E10 Pine TriplEx shoot tip libra... 105 3e-022
gb|AW064656.1|AW064656 ST34B04 Pine TriplEx shoot tip libra... 105 3e-022
gb|AW981873.1|AW981873 PC19F11 Pine TriplEx pollen cone lib... 105 3e-022
gb|BQ291482.1|BQ291482 NXRV059_F08_F NXRV (Nsf Xylem Root w... 105 3e-022
gb|BQ699586.1|BQ699586 NXRV124_C02_F NXRV (Nsf Xylem Root w... 105 3e-022
gb|BQ702181.1|BQ702181 NXSI_125_H02_F NXSI (Nsf Xylem Side ... 105 3e-022
gb|CO367450.1|CO367450 RTK1_34_H04.b1_A029 Roots minus pota... 105 3e-022
gb|CO367532.1|CO367532 RTK1_34_H04.g1_A029 Roots minus pota... 105 3e-022
gb|CV032483.1|CV032483 RTNACL1_8_B03.g1_A029 Roots plus add... 105 3e-022
gb|CX649429.1|CX649429 COLD1_35_E12.b1_A029 Root cold Pinus... 105 3e-022
gb|CX649512.1|CX649512 COLD1_35_E12.g1_A029 Root cold Pinus... 105 3e-022
gb|CX651620.1|CX651620 COLD1_53_D10.g1_A029 Root cold Pinus... 105 3e-022
gb|DR011506.1|DR011506 HEAT1_6_D05.b1_A029 Root at 37 C for... 105 3e-022
gb|DR011586.1|DR011586 HEAT1_6_D05.g1_A029 Root at 37 C for... 105 3e-022
gb|DR050573.1|DR050573 RTBOR1_24_H06.b1_A029 Roots plus add... 105 3e-022
gb|DR050658.1|DR050658 RTBOR1_24_H06.g1_A029 Roots plus add... 105 3e-022
gb|DR089861.1|DR089861 RTAL1_11_F04.b1_A029 Roots plus adde... 105 3e-022
gb|DR092369.1|DR092369 STRR1_1_A09.b1_A033 Stem Response Re... 105 3e-022
gb|DR092449.1|DR092449 STRR1_1_A09.g1_A033 Stem Response Re... 105 3e-022
gb|DR110590.1|DR110590 RTS1_11_F06.g1_A029 Roots minus sulf... 105 3e-022
gb|DR111320.1|DR111320 RTS1_16_H04.g1_A029 Roots minus sulf... 105 3e-022
gb|DR112758.1|DR112758 RTS1_30_H09.b1_A029 Roots minus sulf... 105 3e-022
gb|DR112824.1|DR112824 RTS1_30_H09.g1_A029 Roots minus sulf... 105 3e-022
gb|DR117021.1|DR117021 RTMG1_4_F03.b1_A029 Roots minus magn... 105 3e-022
gb|DR120307.1|DR120307 RTMG1_28_G09.g2_A029 Roots minus mag... 105 3e-022
gb|DR168541.1|DR168541 RTPHOS1_26_E04.b1_A029 Roots minus p... 105 3e-022
gb|DR385301.1|DR385301 RTHG1_7_G09.g1_A029 Roots plus added... 105 3e-022
gb|DR745683.1|DR745683 RTCU1_31_D06.g1_A029 Roots plus adde... 105 3e-022
gb|BQ702065.1|BQ702065 NXSI_124_A05_F NXSI (Nsf Xylem Side ... 105 4e-022
gb|CF472543.1|CF472543 RTDS1_10_C02.b1_A015 Drought-stresse... 105 4e-022
gb|DR016820.1|DR016820 STRS1_12_H07.b1_A034 Shoot tip pitch... 105 4e-022
gb|AW010040.1|AW010040 ST01G02 Pine TriplEx shoot tip libra... 104 8e-022
gb|CD028483.1|CD028483 NXSI_119_E06_F NXSI (Nsf Xylem Side ... 104 8e-022
gb|DR109733.1|DR109733 RTS1_4_F11.b1_A029 Roots minus sulfu... 104 8e-022
gb|BX249133.1|BX249133 BX249133 Pinus pinaster differenciat... 102 2e-021
gb|BX250252.1|BX250252 BX250252 Pinus pinaster differenciat... 102 2e-021
gb|BX253632.1|BX253632 BX253632 Pinus pinaster differenciat... 101 4e-021
gb|DR098991.1|DR098991 STRR1_50_D02.b1_A033 Stem Response R... 101 6e-021
>gb|DR692883.1|DR692883 EST1082971 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADR51 3' end, mRNA sequence
Length = 553
Score = 135 bits (290), Expect = 3e-031
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -1 / +1
Query: 494 TTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYAN 315
T +P IDC +C RC +S R K+CLRACGTCC +C CVPPGTSGNED+CPCYAN
Sbjct: 214 TKAPTSAKAPIDCQKACGERCKESSRQKICLRACGTCCGKCNCVPPGTSGNEDLCPCYAN 393
Query: 314 MKTHDGQHKCP*SIHRGSQH 255
+KTH +HKCP* H +H
Sbjct: 394 LKTHRNKHKCP*I*HVQCKH 453
>gb|DT637618.1|DT637618 EST1152549 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMH568 3' end, mRNA sequence
Length = 562
Score = 135 bits (290), Expect = 3e-031
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = -1 / +3
Query: 494 TTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYAN 315
T +P IDC +C RC +S R K+CLRACGTCC +C CVPPGTSGNED+CPCYAN
Sbjct: 222 TKAPTSAKAPIDCQKACGERCKESSRQKICLRACGTCCGKCNCVPPGTSGNEDLCPCYAN 401
Query: 314 MKTHDGQHKCP*SIHRGSQH 255
+KTH +HKCP* H +H
Sbjct: 402 LKTHRNKHKCP*I*HVQCKH 461
>gb|CO162222.1|CO162222 FLD1_34_A10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_34_A10_A029 3', mRNA sequence
Length = 755
Score = 132 bits (283), Expect = 2e-030
Identities = 47/76 (61%), Positives = 54/76 (71%)
Frame = -1 / -2
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYA 318
+T G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN DVCPCYA
Sbjct: 460 STLQGDGMGIGIDCNAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNADVCPCYA 281
Query: 317 NMKTHDGQHKCP*SIH 270
M+TH + KCP* ++
Sbjct: 280 TMRTHGNRLKCP*ILY 233
>gb|CO157911.1|CO157911 FLD1_3_B08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_3_B08_A029 3', mRNA sequence
Length = 717
Score = 132 bits (282), Expect = 3e-030
Identities = 46/74 (62%), Positives = 54/74 (72%)
Frame = -1 / +1
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYA 318
+T G + IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN +VCPCYA
Sbjct: 145 STAQLQGDGKVIDCSAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNANVCPCYA 324
Query: 317 NMKTHDGQHKCP*S 276
M+TH + KCP*+
Sbjct: 325 TMRTHGNRLKCP*T 366
>gb|CO157973.1|CO157973 FLD1_3_B08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_3_B08_A029 5', mRNA sequence
Length = 670
Score = 132 bits (282), Expect = 3e-030
Identities = 46/74 (62%), Positives = 54/74 (72%)
Frame = -1 / +1
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYA 318
+T G + IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN +VCPCYA
Sbjct: 127 STAQLQGDGKVIDCSAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNANVCPCYA 306
Query: 317 NMKTHDGQHKCP*S 276
M+TH + KCP*+
Sbjct: 307 TMRTHGNRLKCP*T 348
>gb|AW981743.1|AW981743 PC18B07 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC18B07, mRNA sequence
Length = 534
Score = 131 bits (281), Expect = 4e-030
Identities = 45/64 (70%), Positives = 51/64 (79%)
Frame = -1 / +3
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R KMCLRACGTCC RC CVPPGTSGNED CPCYA + TH +H
Sbjct: 243 KTIDCNAACERRCAKASRHKMCLRACGTCCARCNCVPPGTSGNEDTCPCYATITTHGQRH 422
Query: 290 KCP* 279
KCP*
Sbjct: 423 KCP* 434
>gb|AW981894.1|AW981894 PC19H10 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC19H10, mRNA sequence
Length = 529
Score = 131 bits (281), Expect = 4e-030
Identities = 45/64 (70%), Positives = 51/64 (79%)
Frame = -1 / +1
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R KMCLRACGTCC RC CVPPGTSGNED CPCYA + TH +H
Sbjct: 247 KTIDCNAACERRCAKASRHKMCLRACGTCCARCNCVPPGTSGNEDTCPCYATITTHGQRH 426
Query: 290 KCP* 279
KCP*
Sbjct: 427 KCP* 438
>gb|CO161185.1|CO161185 FLD1_27_E01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_27_E01_A029 3', mRNA sequence
Length = 667
Score = 131 bits (281), Expect = 4e-030
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 479 GQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHD 300
G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN DVCPCYA M+TH
Sbjct: 217 GMGIGIDCNAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNADVCPCYATMRTHG 396
Query: 299 GQHKCP*SIH 270
+ KCP* ++
Sbjct: 397 NRLKCP*ILY 426
>gb|CO161263.1|CO161263 FLD1_27_E01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_27_E01_A029 5', mRNA sequence
Length = 640
Score = 131 bits (281), Expect = 4e-030
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = -1 / +3
Query: 479 GQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHD 300
G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN DVCPCYA M+TH
Sbjct: 192 GMGIGIDCNAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNADVCPCYATMRTHG 371
Query: 299 GQHKCP*SIH 270
+ KCP* ++
Sbjct: 372 NRLKCP*ILY 401
>gb|AW754671.1|AW754671 PC04H11 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC04H11, mRNA sequence
Length = 555
Score = 130 bits (279), Expect = 8e-030
Identities = 45/64 (70%), Positives = 51/64 (79%)
Frame = -1 / +2
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R KMCLRACGTCC RC CVPPGTSGNED CPCYA + TH +H
Sbjct: 266 KTIDCNAACERRCAKASRHKMCLRACGTCCARCNCVPPGTSGNEDTCPCYAIITTHGXRH 445
Query: 290 KCP* 279
KCP*
Sbjct: 446 KCP* 457
>gb|BX250321.1|BX250321 BX250321 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP035D06, mRNA sequence
Length = 701
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +1
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 229 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 408
Query: 287 CP* 279
CP*
Sbjct: 409 CP* 417
>gb|CF472618.1|CF472618 RTDS1_10_A02.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_A02_A015 5', mRNA sequence
Length = 767
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +2
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 221 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 400
Query: 287 CP* 279
CP*
Sbjct: 401 CP* 409
>gb|CF666242.1|CF666242 RTCNT1_21_H03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_21_H03_A029 5', mRNA sequence
Length = 642
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +1
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 220 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 399
Query: 287 CP* 279
CP*
Sbjct: 400 CP* 408
>gb|CO158426.1|CO158426 FLD1_6_G07.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_G07_A029 5', mRNA sequence
Length = 741
Score = 130 bits (278), Expect = 1e-029
Identities = 46/73 (63%), Positives = 52/73 (71%)
Frame = -1 / +3
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYA 318
+T G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN +VCPCYA
Sbjct: 165 STAQLQGDGIGIDCSAACGVRCQKASRHKMCLRACGTCCSRCSCVPPGTSGNANVCPCYA 344
Query: 317 NMKTHDGQHKCP* 279
M+TH + KCP*
Sbjct: 345 TMRTHGNRLKCP* 383
>gb|CO166223.1|CO166223 FLD1_60_F10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_60_F10_A029 3', mRNA sequence
Length = 871
Score = 130 bits (278), Expect = 1e-029
Identities = 46/73 (63%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYA 318
+T G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN +VCPCYA
Sbjct: 199 STAQLQGDGMGIDCSAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNANVCPCYA 378
Query: 317 NMKTHDGQHKCP* 279
M+TH + KCP*
Sbjct: 379 TMRTHGNRLKCP* 417
>gb|DR011636.1|DR011636 HEAT1_7_A06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_7_A06_A029 3', mRNA sequence
Length = 663
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +3
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 201 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 380
Query: 287 CP* 279
CP*
Sbjct: 381 CP* 389
>gb|DR013833.1|DR013833 HEAT1_21_G04.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_21_G04_A029 5', mRNA sequence
Length = 814
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / -2
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 627 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 448
Query: 287 CP* 279
CP*
Sbjct: 447 CP* 439
>gb|DR014717.1|DR014717 HEAT1_51_E10.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_E10_A029 3', mRNA sequence
Length = 764
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +3
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 210 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 389
Query: 287 CP* 279
CP*
Sbjct: 390 CP* 398
>gb|DR014801.1|DR014801 HEAT1_51_E10.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_E10_A029 5', mRNA sequence
Length = 798
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +3
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 219 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 398
Query: 287 CP* 279
CP*
Sbjct: 399 CP* 407
>gb|DR047993.1|DR047993 RTBOR1_6_A04.b2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_6_A04_A029 3', mRNA sequence
Length = 594
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +3
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 282 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 461
Query: 287 CP* 279
CP*
Sbjct: 462 CP* 470
>gb|DR048072.1|DR048072 RTBOR1_6_A04.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_6_A04_A029 5', mRNA sequence
Length = 576
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +3
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 252 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 431
Query: 287 CP* 279
CP*
Sbjct: 432 CP* 440
>gb|DR101834.1|DR101834 STRR1_76_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_E02_A033 3', mRNA sequence
Length = 766
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +3
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 243 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 422
Query: 287 CP* 279
CP*
Sbjct: 423 CP* 431
>gb|DR101913.1|DR101913 STRR1_76_E02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_76_E02_A033 5', mRNA sequence
Length = 618
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +1
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 214 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 393
Query: 287 CP* 279
CP*
Sbjct: 394 CP* 402
>gb|DR742743.1|DR742743 RTCU1_6_E07.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_6_E07_A029 5', mRNA sequence
Length = 668
Score = 130 bits (278), Expect = 1e-029
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = -1 / +1
Query: 467 AIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHK 288
+IDC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ K
Sbjct: 232 SIDCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRK 411
Query: 287 CP* 279
CP*
Sbjct: 412 CP* 420
>gb|CO164907.1|CO164907 FLD1_51_C04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_51_C04_A029 3', mRNA sequence
Length = 817
Score = 129 bits (277), Expect = 2e-029
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = -1 / +3
Query: 479 GQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHD 300
G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN DVCPCY M+TH
Sbjct: 219 GMGIGIDCNAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNADVCPCYVTMRTHG 398
Query: 299 GQHKCP*SIH 270
+ KCP* ++
Sbjct: 399 NRLKCP*ILY 428
>gb|AW754597.1|AW754597 PC04B04 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC04B04, mRNA sequence
Length = 532
Score = 128 bits (275), Expect = 3e-029
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = -1 / +2
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R K+CLRACGTCC RC CVPPGTSGNED CPCYA + TH +H
Sbjct: 245 KTIDCKAACERRCAKASRHKICLRACGTCCARCNCVPPGTSGNEDTCPCYATITTHGQRH 424
Query: 290 KCP* 279
KCP*
Sbjct: 425 KCP* 436
>gb|CO174147.1|CO174147 NDL1_42_B09.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_42_B09_A029 3', mRNA sequence
Length = 819
Score = 127 bits (273), Expect = 6e-029
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -1 / +3
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ KCP
Sbjct: 147 DCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRKCP 326
Query: 281 * 279
*
Sbjct: 327 * 329
>gb|DR016652.1|DR016652 STRS1_11_H07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_11_H07_A034 3', mRNA sequence
Length = 855
Score = 127 bits (273), Expect = 6e-029
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -1 / -1
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DC A+C RC K+ R MCLRACGTCC RC CVPPGTSGN+D+CPCYAN TH G+ KCP
Sbjct: 231 DCSAACGERCKKASRHNMCLRACGTCCARCNCVPPGTSGNQDLCPCYANQTTHGGRRKCP 52
Query: 281 * 279
*
Sbjct: 51 * 49
>gb|DR182130.1|DR182130 RTMNUT1_43_C07.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_43_C07_A029 3', mRNA sequence
Length = 717
Score = 127 bits (273), Expect = 6e-029
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = -1 / +2
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC ++ R K+CLRACGTCC +C CVPPGTSGN+D+CPCYAN+KTH +
Sbjct: 275 QTIDCNAACGQRCKEASRNKVCLRACGTCCAKCNCVPPGTSGNKDLCPCYANLKTHGNKP 454
Query: 290 KCP* 279
KCP*
Sbjct: 455 KCP* 466
>gb|DR182211.1|DR182211 RTMNUT1_43_C07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_43_C07_A029 5', mRNA sequence
Length = 695
Score = 127 bits (273), Expect = 6e-029
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = -1 / +2
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC ++ R K+CLRACGTCC +C CVPPGTSGN+D+CPCYAN+KTH +
Sbjct: 248 QTIDCNAACGQRCKEASRNKVCLRACGTCCAKCNCVPPGTSGNKDLCPCYANLKTHGNKP 427
Query: 290 KCP* 279
KCP*
Sbjct: 428 KCP* 439
>gb|AW754562.1|AW754562 PC03F09 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC03F09, mRNA sequence
Length = 495
Score = 124 bits (266), Expect = 5e-028
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = -1 / +3
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R K+CLRACGTCC RC CVPPGTSGNED CPC A + TH +H
Sbjct: 243 KTIDCKAACERRCAKASRHKICLRACGTCCARCNCVPPGTSGNEDTCPCCATITTHGQRH 422
Query: 290 KCP* 279
KCP*
Sbjct: 423 KCP* 434
>gb|CO167597.1|CO167597 FLD1_70_A07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_70_A07_A029 3', mRNA sequence
Length = 715
Score = 124 bits (265), Expect = 7e-028
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = -1 / +1
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN +VCPCYA M+TH + KCP
Sbjct: 178 DCSAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNANVCPCYAPMRTHGNRLKCP 357
Query: 281 * 279
*
Sbjct: 358 * 360
>gb|DR384465.1|DR384465 RTHG1_2_A04.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_2_A04_A029 5', mRNA sequence
Length = 681
Score = 122 bits (260), Expect = 3e-027
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = -1 / -3
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC ++ R +CLRACGTCC +C CVPPGT GN+D+C CYA+MKTHD +
Sbjct: 517 QTIDCNAACGERCKEASRQNVCLRACGTCCAKCNCVPPGTYGNQDLCACYASMKTHDNKP 338
Query: 290 KCP* 279
KCP*
Sbjct: 337 KCP* 326
>gb|AW755049.1|AW755049 PC10B02 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC10B02, mRNA sequence
Length = 596
Score = 121 bits (259), Expect = 5e-027
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = -1 / +2
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R KMCLRACGTCC RC CV GTSGNED CPCYA + TH +H
Sbjct: 245 KTIDCNAACERRCAKASRHKMCLRACGTCCARCNCVXXGTSGNEDTCPCYATITTHGQRH 424
Query: 290 KCP* 279
+CP*
Sbjct: 425 ECP* 436
>gb|AW981559.1|AW981559 PC14A08 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC14A08, mRNA sequence
Length = 598
Score = 120 bits (257), Expect = 9e-027
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -1 / +2
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
+ IDC A+C RC+K+ R KMCLRACGTCC RC CVPPGTSGNED CPCYA + TH +
Sbjct: 245 KTIDCNAACERRCAKASRHKMCLRACGTCCARCNCVPPGTSGNEDTCPCYATITTHGQET 424
Query: 290 KCP 282
+ P
Sbjct: 425 QMP 433
>gb|CF665776.1|CF665776 RTCNT1_18_H03.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_18_H03_A029 3', mRNA sequence
Length = 716
Score = 119 bits (254), Expect = 2e-026
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = -1 / +2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DC A+C RC ++ R +CLRACGTCC +C CVPPGT GN+D+C CYA+MKTHD + KCP
Sbjct: 434 DCNAACGERCKEASRQNVCLRACGTCCAKCNCVPPGTYGNQDLCACYASMKTHDNKPKCP 613
Query: 281 * 279
*
Sbjct: 614 * 616
>gb|CO197838.1|CO197838 GEO1_9_B05.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_9_B05_A029 5', mRNA sequence
Length = 462
Score = 119 bits (254), Expect = 2e-026
Identities = 39/61 (63%), Positives = 48/61 (78%)
Frame = -1 / -2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DC A+C RC ++ R +CLRACGTCC +C CVPPGT GN+D+C CYA+MKTHD + KCP
Sbjct: 323 DCNAACGERCKEASRQNVCLRACGTCCAKCNCVPPGTYGNQDLCACYASMKTHDNKPKCP 144
Query: 281 * 279
*
Sbjct: 143 * 141
>gb|CF394511.1|CF394511 RTDS2_6_G10.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_6_G10_A021 3', mRNA sequence
Length = 584
Score = 118 bits (253), Expect = 3e-026
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = -1 / +3
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DC A+C RC ++ R +CLRACGTCC +C CVPPGT GN+D+C CYA+MKTHD KCP
Sbjct: 216 DCNAACGERCKEASRQNVCLRACGTCCAKCNCVPPGTYGNQDLCACYASMKTHDNNPKCP 395
Query: 281 * 279
*
Sbjct: 396 * 398
>gb|DR092274.1|DR092274 RTAL1_28_C09.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_28_C09_A029 3', mRNA sequence
Length = 433
Score = 117 bits (251), Expect = 6e-026
Identities = 41/64 (64%), Positives = 46/64 (71%)
Frame = -1 / -3
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYA 318
+T G IDC A+C RC K+ R KMCLRACGTCC RC CVPPGTSGN +VCPCYA
Sbjct: 194 STAQLQGDGMGIDCSAACGVRCQKASRHKMCLRACGTCCARCSCVPPGTSGNANVCPCYA 15
Query: 317 NMKT 306
M+T
Sbjct: 14 TMRT 3
>gb|CO158346.1|CO158346 FLD1_6_G07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_G07_A029 3', mRNA sequence
Length = 670
Score = 102 bits (218), Expect(2) = 1e-025
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 440 YRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP* 279
Y + KMCLRACGTCC RC CVPPGTSGN +VCPCYA M+TH + KCP*
Sbjct: 46 YDAKRHPAHKMCLRACGTCCSRCSCVPPGTSGNANVCPCYATMRTHGNRLKCP* 207
Score = 33.6 bits (67), Expect(2) = 1e-025
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / +3
Query: 479 GQAEAIDCGASCSYRCSKSGRP 414
G IDC A+C RC K+ RP
Sbjct: 6 GDGIGIDCSAACGVRCQKASRP 71
>gb|CO163534.1|CO163534 FLD1_42_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_F03_A029 3', mRNA sequence
Length = 814
Score = 114 bits (244), Expect = 6e-025
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -1 / +2
Query: 437 RCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP* 279
RC K+ R KMCLRACGTCC RC CVPPGTSGN DVCPCYA M+TH + KCP*
Sbjct: 299 RCQKASRHKMCLRACGTCCARCSCVPPGTSGNADVCPCYATMRTHGNRLKCP* 457
>gb|CO163618.1|CO163618 FLD1_42_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_F03_A029 5', mRNA sequence
Length = 812
Score = 114 bits (244), Expect = 6e-025
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -1 / +1
Query: 437 RCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP* 279
RC K+ R KMCLRACGTCC RC CVPPGTSGN DVCPCYA M+TH + KCP*
Sbjct: 403 RCQKASRHKMCLRACGTCCARCSCVPPGTSGNADVCPCYATMRTHGNRLKCP* 561
>gb|CX712810.1|CX712810 RTPQ1_5_A04.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_A04_A032 3', mRNA sequence
Length = 869
Score = 114 bits (243), Expect = 8e-025
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC +C RC ++ CLRACGTCC +C CVPPGT GN+++CPCYANMKTH Q KC
Sbjct: 112 IDCKVACGGRCKEASLHDRCLRACGTCCAKCNCVPPGTYGNKNLCPCYANMKTHGNQLKC 291
Query: 284 P* 279
P*
Sbjct: 292 P* 297
>gb|CX712881.1|CX712881 RTPQ1_5_A04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_A04_A032 5', mRNA sequence
Length = 905
Score = 114 bits (243), Expect = 8e-025
Identities = 39/62 (62%), Positives = 46/62 (74%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC +C RC ++ CLRACGTCC +C CVPPGT GN+++CPCYANMKTH Q KC
Sbjct: 214 IDCKVACGGRCKEASLHDRCLRACGTCCAKCNCVPPGTYGNKNLCPCYANMKTHGNQLKC 393
Query: 284 P* 279
P*
Sbjct: 394 P* 399
>gb|CO166280.1|CO166280 FLD1_60_F10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_60_F10_A029 5', mRNA sequence
Length = 770
Score = 73.9 bits (155), Expect(2) = 1e-024
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 383 CQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP* 279
C RC CVPPGTSGN +VCPCYA M+TH + KCP*
Sbjct: 280 CARCSCVPPGTSGNANVCPCYATMRTHGNRLKCP* 384
Score = 59.3 bits (123), Expect(2) = 1e-024
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -1 / +3
Query: 497 TTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTC 384
+T G IDC A+C RC K+ R KMCLRACGTC
Sbjct: 165 STAQLQGDGMGIDCSAACGVRCQKASRHKMCLRACGTC 278
>gb|DN631232.1|DN631232 EST982048 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC655, mRNA sequence
Length = 539
Score = 113 bits (241), Expect = 1e-024
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = -1 / +2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC +C RC ++ CLRACGTCC +C CVPPGT GN+++CPCYANMKTH + KC
Sbjct: 206 IDCKVACGGRCKEASLHDRCLRACGTCCAKCNCVPPGTQGNKNLCPCYANMKTHGNKLKC 385
Query: 284 P* 279
P*
Sbjct: 386 P* 391
>gb|AW981762.1|AW981762 PC18D09 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC18D09, mRNA sequence
Length = 530
Score = 111 bits (238), Expect = 4e-024
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = -1 / +3
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC ++CS RCSK+ K C+R CG CC +C CVPPGT GN D C CYAN KT G +KC
Sbjct: 165 IDCDSACSRRCSKASEQKRCMRYCGICCAKCNCVPPGTYGNRDDCSCYANWKTPGGGNKC 344
Query: 284 P*SI 273
P*S+
Sbjct: 345 P*SL 356
>gb|AW981976.1|AW981976 PC22C08 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC22C08, mRNA sequence
Length = 483
Score = 110 bits (235), Expect = 1e-023
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = -1 / +3
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC ++CS RCSK+ K C++ CG CC +C CVPPGT GN D C CYAN KT G +KC
Sbjct: 165 IDCDSACSRRCSKASEQKRCMKYCGICCAKCNCVPPGTYGNRDDCSCYANWKTPGGGNKC 344
Query: 284 P*SI 273
P*S+
Sbjct: 345 P*SL 356
>gb|DN610794.1|DN610794 EST963844 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAU15, mRNA sequence
Length = 556
Score = 108 bits (231), Expect = 3e-023
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC +C RC ++ CLRACGTCC +C CV PGT GN+++CPCYANMKTH + KC
Sbjct: 256 IDCKVACGGRCKEASLHDRCLRACGTCCAKCNCVLPGTQGNKNLCPCYANMKTHGNKLKC 435
Query: 284 P* 279
P*
Sbjct: 436 P* 441
>gb|DT628026.1|DT628026 EST1156775 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCT42 5' end, mRNA sequence
Length = 506
Score = 108 bits (231), Expect = 3e-023
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = -1 / -1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDC +C RC ++ CLRACGTCC +C CV PGT GN+++CPCYANMKTH + KC
Sbjct: 251 IDCKVACGGRCKEASLHDRCLRACGTCCAKCNCVLPGTQGNKNLCPCYANMKTHGNKLKC 72
Query: 284 P* 279
P*
Sbjct: 71 P* 66
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 320,443,721
Number of Sequences: 355925
Number of extensions: 4266358
Number of successful extensions: 42504
Number of sequences better than 1.0e-020: 119
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 9435587875
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)