TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2943819.2.1
(1121 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus... 299 5e-083
gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch... 299 5e-083
gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine ro... 299 5e-083
gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus ni... 297 2e-082
gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clon... 298 8e-082
gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine r... 294 2e-081
gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iro... 292 3e-079
gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magn... 291 6e-079
gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side ... 292 3e-078
gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 ... 291 3e-078
gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron... 288 3e-077
gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus p... 286 2e-076
gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulf... 286 3e-076
gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine ro... 286 3e-076
gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus ad... 286 3e-076
gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus adde... 286 3e-076
gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus adde... 286 3e-076
gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip libra... 283 1e-075
gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iro... 283 2e-075
gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered lo... 281 9e-075
gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulf... 281 9e-075
gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus m... 279 3e-074
gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulf... 269 6e-074
gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus adde... 277 1e-073
gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C fo... 272 8e-073
gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine r... 271 5e-072
gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stresse... 271 5e-072
gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus pota... 271 5e-072
gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch... 271 5e-072
gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iro... 271 5e-072
gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control P... 268 1e-071
gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus... 251 2e-071
gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for... 269 3e-071
gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side ... 268 5e-071
gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response R... 266 2e-070
gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C fo... 263 3e-070
gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch... 263 3e-070
gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clon... 264 1e-069
gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropis... 264 1e-069
gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2... 264 1e-069
gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stresse... 254 1e-069
gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control P... 261 7e-069
gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2... 260 1e-068
gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus... 260 1e-068
gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clon... 259 3e-068
gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus pota... 255 3e-067
gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered lo... 255 5e-067
gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nit... 252 3e-066
gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus ad... 251 6e-066
gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pin... 249 1e-065
gb|DR079932.1|DR079932 RTFEPL1_18_F11.g1_A029 Roots plus ad... 249 3e-065
gb|DR163874.1|DR163874 RTFE1_45_A12.g1_A029 Roots minus iro... 239 7e-065
gb|AW064634.1|AW064634 ST33H05 Pine TriplEx shoot tip libra... 243 6e-064
gb|DR014928.1|DR014928 HEAT1_52_A11.g1_A029 Root at 37 C fo... 243 2e-063
gb|CF389081.1|CF389081 RTDR2_13_A10.g1_A021 Loblolly pine r... 242 5e-063
gb|CO201585.1|CO201585 RTCNT2_6_F07.g1_A029 Root control 2 ... 231 1e-062
gb|CO361899.1|CO361899 NDL2_7_G04.g1_A029 Needles control 2... 239 3e-062
gb|CF667523.1|CF667523 RTCNT1_30_H07.g1_A029 Root control P... 236 3e-061
gb|DR685654.1|DR685654 EST1075731 Normalized pine embryo li... 234 1e-060
gb|CF400460.1|CF400460 RTWW1_5_H12.g1_A015 Well-watered lob... 230 1e-060
gb|DR071883.1|DR071883 RTDK1_22_E02.g1_A029 Roots, dark Pin... 232 5e-060
gb|AY356372.1| Pinus taeda R2R3-MYB transcription factor (M... 232 5e-060
gb|DR052727.1|DR052727 RTCA1_6_B03.g1_A029 Roots minus calc... 226 5e-060
gb|DR694473.1|DR694473 EST1084565 Normalized pine embryo li... 230 1e-059
gb|DT638742.1|DT638742 EST1153673 Normalized pine embryo li... 230 1e-059
gb|DR694940.1|DR694940 EST1085033 Normalized pine embryo li... 229 3e-059
gb|DT639133.1|DT639133 EST1154064 Normalized pine embryo li... 229 3e-059
gb|CF477905.1|CF477905 RTWW3_13_C03.g1_A022 Well-watered lo... 226 2e-058
gb|DR117421.1|DR117421 RTMG1_6_G12.g1_A029 Roots minus magn... 220 2e-058
gb|CF391376.1|CF391376 RTDR3_1_G04.g1_A022 Loblolly pine ro... 226 3e-058
gb|DR050898.1|DR050898 RTBOR1_26_H05.b1_A029 Roots plus add... 222 3e-057
gb|CF391408.1|CF391408 RTDR3_1_E10.g1_A022 Loblolly pine ro... 222 4e-057
gb|CF394327.1|CF394327 RTDS2_4_B08.g1_A021 Drought-stressed... 222 4e-057
gb|CF395727.1|CF395727 RTDS2_16_B07.g1_A021 Drought-stresse... 222 4e-057
gb|CF397272.1|CF397272 RTDS3_2_C01.g1_A022 Drought-stressed... 221 7e-057
gb|CF668816.1|CF668816 RTCNT1_38_G11.g1_A029 Root control P... 221 7e-057
gb|DR058733.1|DR058733 RTNIT1_13_C07.g1_A029 Roots minus ni... 220 1e-056
gb|DR167401.1|DR167401 RTPHOS1_18_C09.g1_A029 Roots minus p... 220 1e-056
gb|AW065119.1|AW065119 ST39H05 Pine TriplEx shoot tip libra... 220 2e-056
gb|DR098778.1|DR098778 STRR1_47_G01.g1_A033 Stem Response R... 217 9e-056
gb|CF399612.1|CF399612 RTDS3_26_H01.g1_A022 Drought-stresse... 216 2e-055
gb|CF667292.1|CF667292 RTCNT1_29_G02.b1_A029 Root control P... 214 1e-054
gb|DR020720.1|DR020720 STRS1_38_G12.g1_A034 Shoot tip pitch... 213 2e-054
gb|DR110104.1|DR110104 RTS1_8_C03.g1_A029 Roots minus sulfu... 213 2e-054
gb|CF671993.1|CF671993 RTCNT1_60_D02.g1_A029 Root control P... 212 3e-054
gb|CO366297.1|CO366297 RTK1_27_B09.b1_A029 Roots minus pota... 211 6e-054
gb|DR167765.1|DR167765 RTPHOS1_20_H05.g1_A029 Roots minus p... 211 6e-054
gb|CO162411.1|CO162411 FLD1_35_D02.b1_A029 Root flooded Pin... 210 1e-053
gb|CO158547.1|CO158547 FLD1_7_D03.g1_A029 Root flooded Pinu... 210 2e-053
gb|AW065064.1|AW065064 ST39B10 Pine TriplEx shoot tip libra... 210 2e-053
gb|DR384384.1|DR384384 RTHG1_1_H06.g1_A029 Roots plus added... 210 2e-053
gb|DR384689.1|DR384689 RTHG1_3_H06.g1_A029 Roots plus added... 210 2e-053
gb|BQ290999.1|BQ290999 NXRV054_D07_F NXRV (Nsf Xylem Root w... 209 3e-053
gb|CF396247.1|CF396247 RTDS2_15_B11.g1_A021 Drought-stresse... 134 8e-053
gb|CX647457.1|CX647457 COLD1_16_B04.g1_A029 Root cold Pinus... 206 2e-052
gb|CO162972.1|CO162972 FLD1_38_D09.g1_A029 Root flooded Pin... 206 3e-052
gb|DR081462.1|DR081462 RTFEPL1_29_G04.g1_A029 Roots plus ad... 206 3e-052
gb|CO170303.1|CO170303 NDL1_13_D05.b1_A029 Needles control ... 166 3e-052
gb|CF385274.1|CF385274 RTDR1_2_D01.g1_A015 Loblolly pine ro... 205 3e-052
gb|CN852309.1|CN852309 Pi148-1 Salicylate-treated slash pin... 204 9e-052
gb|BQ634727.1|BQ634727 NXRV072_E09_F NXRV (Nsf Xylem Root w... 204 1e-051
gb|DR051127.1|DR051127 RTBOR1_27_G08.g1_A029 Roots plus add... 202 3e-051
gb|DR179654.1|DR179654 RTMNUT1_23_B05.g2_A029 Roots minus m... 189 7e-051
gb|DR059561.1|DR059561 RTNIT1_18_A02.g1_A029 Roots minus ni... 201 9e-051
gb|DR015700.1|DR015700 STRS1_5_D02.b1_A034 Shoot tip pitch ... 200 1e-050
gb|CF397637.1|CF397637 RTDS3_4_A07.g1_A022 Drought-stressed... 199 2e-050
gb|DR694707.1|DR694707 EST1084799 Normalized pine embryo li... 199 4e-050
gb|DT638995.1|DT638995 EST1153926 Normalized pine embryo li... 199 4e-050
gb|CF393224.1|CF393224 RTDR3_17_B01.g1_A022 Loblolly pine r... 197 1e-049
gb|CO176256.1|CO176256 NDL1_60_G12.g1_A029 Needles control ... 196 3e-049
gb|DR015783.1|DR015783 STRS1_5_D02.g1_A034 Shoot tip pitch ... 196 3e-049
gb|CF401126.1|CF401126 RTWW1_10_H02.b1_A015 Well-watered lo... 194 7e-049
gb|DR015810.1|DR015810 STRS1_5_F07.g1_A034 Shoot tip pitch ... 158 1e-048
gb|DR101609.1|DR101609 STRR1_74_C02.g1_A033 Stem Response R... 184 1e-048
gb|CO368386.1|CO368386 RTK1_40_G08.b1_A029 Roots minus pota... 193 1e-048
gb|CO362169.1|CO362169 RTK1_1_F07.g1_A029 Roots minus potas... 190 2e-047
gb|CV034962.1|CV034962 RTNACL1_12_F05.g1_A029 Roots plus ad... 189 3e-047
gb|CX714163.1|CX714163 RTPQ1_18_D03.g1_A032 Roots treated w... 189 3e-047
gb|BX784172.1|BX784172 BX784172 Pinus pinaster differenciat... 188 5e-047
gb|DT633531.1|DT633531 EST1148462 Normalized pine embryo li... 156 8e-047
gb|DR686108.1|DR686108 EST1076186 Normalized pine embryo li... 156 8e-047
gb|DR744906.1|DR744906 RTCU1_25_E06.g1_A029 Roots plus adde... 156 8e-047
gb|AY356371.1| Pinus taeda R2R3-MYB transcription factor (M... 185 4e-046
gb|CF475091.1|CF475091 RTWW2_5_F10.g1_A021 Well-watered lob... 154 6e-046
gb|CF391868.1|CF391868 RTDR3_10_B04.g1_A022 Loblolly pine r... 183 2e-045
gb|DR069928.1|DR069928 RTDK1_10_F06.b1_A029 Roots, dark Pin... 183 2e-045
gb|DR072123.1|DR072123 RTDK1_24_F01.b1_A029 Roots, dark Pin... 183 2e-045
gb|DR094442.1|DR094442 STRR1_14_D03.g1_A033 Stem Response R... 183 2e-045
gb|CO172303.1|CO172303 NDL1_28_G10.g1_A029 Needles control ... 181 1e-044
gb|DR386238.1|DR386238 RTHG1_13_G03.g1_A029 Roots plus adde... 181 1e-044
gb|DT633408.1|DT633408 EST1148339 Normalized pine embryo li... 146 1e-044
gb|DR686505.1|DR686505 EST1076583 Normalized pine embryo li... 146 1e-044
gb|CF470618.1|CF470618 RTDS1_13_H10.g1_A015 Drought-stresse... 180 2e-044
gb|CO173370.1|CO173370 NDL1_35_F03.g1_A029 Needles control ... 180 2e-044
gb|CO368639.1|CO368639 RTK1_41_H02.g1_A029 Roots minus pota... 148 2e-044
gb|CF396041.1|CF396041 RTDS2_20_C12.g1_A021 Drought-stresse... 179 3e-044
gb|DR683171.1|DR683171 EST1073247 Normalized pine embryo li... 178 5e-044
gb|DR683172.1|DR683172 EST1073248 Normalized pine embryo li... 178 5e-044
gb|DT631296.1|DT631296 EST1146227 Normalized pine embryo li... 178 5e-044
gb|DR055413.1|DR055413 RTCA1_23_C03.g2_A029 Roots minus cal... 149 2e-043
gb|DR683147.1|DR683147 EST1073223 Normalized pine embryo li... 176 2e-043
gb|DT631233.1|DT631233 EST1146164 Normalized pine embryo li... 176 2e-043
gb|CX651169.1|CX651169 COLD1_50_D03.g1_A029 Root cold Pinus... 176 3e-043
gb|BE520012.1|BE520012 NXCI_028_B03_F NXCI (Nsf Xylem Compr... 175 6e-043
gb|CO173249.1|CO173249 NDL1_35_A08.b1_A029 Needles control ... 173 2e-042
gb|CO362724.1|CO362724 RTK1_5_A02.g1_A029 Roots minus potas... 133 2e-042
gb|CF663690.1|CF663690 RTCNT1_4_C02.g1_A029 Root control Pi... 172 3e-042
gb|DR746217.1|DR746217 RTCU1_35_B06.g1_A029 Roots plus adde... 171 8e-042
gb|DR111182.1|DR111182 RTS1_16_A02.b1_A029 Roots minus sulf... 171 1e-041
gb|BX678005.1|BX678005 BX678005 RN Pinus pinaster cDNA clon... 166 1e-041
gb|BF609979.1|BF609979 NXSI_053_C11_F NXSI (Nsf Xylem Side ... 170 2e-041
gb|CV033497.1|CV033497 RTNACL1_34_H05.g1_A029 Roots plus ad... 166 2e-040
gb|CV035967.1|CV035967 RTNACL1_43_E10.g1_A029 Roots plus ad... 166 2e-040
gb|DR089238.1|DR089238 RTAL1_7_A05.g1_A029 Roots plus added... 166 2e-040
gb|DR384837.1|DR384837 RTHG1_4_H08.g1_A029 Roots plus added... 166 2e-040
gb|DT632905.1|DT632905 EST1147836 Normalized pine embryo li... 165 5e-040
gb|DR101544.1|DR101544 STRR1_74_C02.b1_A033 Stem Response R... 165 7e-040
gb|CO164542.1|CO164542 FLD1_48_E08.g1_A029 Root flooded Pin... 162 3e-039
gb|DR167833.1|DR167833 RTPHOS1_21_A06.g1_A029 Roots minus p... 159 6e-039
gb|DR079868.1|DR079868 RTFEPL1_18_F11.b1_A029 Roots plus ad... 161 6e-039
gb|CO173319.1|CO173319 NDL1_35_A08.g1_A029 Needles control ... 159 4e-038
gb|BX250447.1|BX250447 BX250447 Pinus pinaster differenciat... 157 2e-037
gb|CO361388.1|CO361388 NDL2_4_C06.g1_A029 Needles control 2... 148 2e-037
gb|CF387233.1|CF387233 RTDR1_11_B07.g1_A015 Loblolly pine r... 144 4e-035
gb|CF390133.1|CF390133 RTDR2_12_C07.g1_A021 Loblolly pine r... 84 5e-035
gb|CF396536.1|CF396536 RTDS2_22_H07.g1_A021 Drought-stresse... 147 1e-034
gb|DR117679.1|DR117679 RTMG1_8_A11.g1_A029 Roots minus magn... 138 9e-034
gb|DR117678.1|DR117678 RTMG1_8_A10.g1_A029 Roots minus magn... 138 1e-033
gb|CF672338.1|CF672338 RTCNT1_62_H04.g1_A029 Root control P... 88 1e-033
gb|DR690028.1|DR690028 EST1080114 Normalized pine embryo li... 103 4e-033
gb|DT635793.1|DT635793 EST1150724 Normalized pine embryo li... 103 4e-033
gb|DR020641.1|DR020641 STRS1_38_G12.b1_A034 Shoot tip pitch... 142 4e-033
gb|DR167893.1|DR167893 RTPHOS1_21_G02.g1_A029 Roots minus p... 139 3e-032
gb|BG319376.1|BG319376 NXPV_027_C05_F NXPV (Nsf Xylem Plani... 137 1e-031
gb|CF665728.1|CF665728 RTCNT1_18_C05.b1_A029 Root control P... 137 2e-031
gb|DR017577.1|DR017577 STRS1_17_E03.b1_A034 Shoot tip pitch... 129 3e-030
gb|CF395399.1|CF395399 RTDS2_11_H08.g1_A021 Drought-stresse... 123 7e-030
gb|DR059765.1|DR059765 RTNIT1_19_D08.g1_A029 Roots minus ni... 130 2e-029
gb|DR096412.1|DR096412 STRR1_27_G02.g1_A033 Stem Response R... 129 3e-029
gb|CO367106.1|CO367106 RTK1_32_E03.b1_A029 Roots minus pota... 128 7e-029
gb|CO162486.1|CO162486 FLD1_35_D02.g1_A029 Root flooded Pin... 126 1e-028
gb|CF392063.1|CF392063 RTDR3_12_C02.g1_A022 Loblolly pine r... 91 3e-028
gb|CX648339.1|CX648339 COLD1_28_B12.b1_A029 Root cold Pinus... 123 1e-027
gb|CF403056.1|CF403056 RTWW1_24_G08.g1_A015 Well-watered lo... 123 2e-027
gb|DR015297.1|DR015297 STRS1_2_D10.g1_A034 Shoot tip pitch ... 121 1e-026
gb|CV033833.1|CV033833 RTNACL1_36_H06.g1_A029 Roots plus ad... 120 2e-026
gb|DR112102.1|DR112102 RTS1_25_H07.g1_A029 Roots minus sulf... 120 2e-026
gb|DR100867.1|DR100867 STRR1_68_H01.g1_A033 Stem Response R... 119 4e-026
gb|DN448288.1|DN448288 EST944087 Sequencing ESTs from loblo... 101 4e-025
gb|DT625580.1|DT625580 EST1157504 Sequencing ESTs from lobl... 101 4e-025
gb|CN783759.1|CN783759 EST782450 Sequencing ESTs from loblo... 101 4e-025
gb|CV138259.1|CV138259 EST849468 Sequencing ESTs from loblo... 101 4e-025
gb|CF398623.1|CF398623 RTDS3_13_E02.b1_A022 Drought-stresse... 105 4e-025
gb|DT624539.1|DT624539 EST1158826 Sequencing ESTs from lobl... 101 4e-025
gb|DR109956.1|DR109956 RTS1_1_B02.b1_A029 Roots minus sulfu... 112 4e-024
gb|DR120088.1|DR120088 RTMG1_27_A10.g2_A029 Roots minus mag... 112 4e-024
gb|DR177927.1|DR177927 RTMNUT1_8_E11.b1_A029 Roots minus mi... 106 2e-023
gb|BQ654804.1|BQ654804 NXRV085_H06_F NXRV (Nsf Xylem Root w... 109 3e-023
gb|CO164694.1|CO164694 FLD1_49_E04.g1_A029 Root flooded Pin... 104 5e-023
gb|DR050127.1|DR050127 RTBOR1_21_A09.g1_A029 Roots plus add... 99 5e-023
gb|DR013838.1|DR013838 HEAT1_21_G09.g1_A029 Root at 37 C fo... 99 5e-023
gb|DR024798.1|DR024798 STRS1_67_B12.g1_A034 Shoot tip pitch... 99 5e-023
gb|DR089099.1|DR089099 RTAL1_6_B11.g1_A029 Roots plus added... 99 5e-023
gb|CO364221.1|CO364221 RTK1_14_A05.g1_A029 Roots minus pota... 99 5e-023
gb|CV139163.1|CV139163 EST850372 Sequencing ESTs from loblo... 99 5e-023
gb|DR024941.1|DR024941 STRS1_68_B11.g1_A034 Shoot tip pitch... 99 5e-023
gb|DT626587.1|DT626587 EST1158511 Sequencing ESTs from lobl... 99 5e-023
gb|CF669684.1|CF669684 RTCNT1_45_A07.g1_A029 Root control P... 99 5e-023
gb|CF386912.1|CF386912 RTDR1_9_D07.g1_A015 Loblolly pine ro... 99 5e-023
gb|CD020726.1|CD020726 NXNV_088_G08_F Nsf Xylem Normal wood... 107 1e-022
gb|CO361758.1|CO361758 NDL2_6_H01.g1_A029 Needles control 2... 84 3e-022
gb|CF470298.1|CF470298 RTDS1_18_B11.g1_A015 Drought-stresse... 66 8e-022
gb|DR098178.1|DR098178 STRR1_39_D04.g1_A033 Stem Response R... 104 1e-021
gb|DN458982.1|DN458982 EST954781 Sequencing ESTs from loblo... 98 2e-021
gb|DN464734.1|DN464734 EST960533 Sequencing ESTs from loblo... 98 2e-021
gb|CN783895.1|CN783895 EST782586 Sequencing ESTs from loblo... 98 2e-021
gb|DN455288.1|DN455288 EST951087 Sequencing ESTs from loblo... 98 2e-021
gb|CV135175.1|CV135175 EST846384 Sequencing ESTs from loblo... 98 2e-021
gb|DN463709.1|DN463709 EST959508 Sequencing ESTs from loblo... 98 2e-021
gb|DT626735.1|DT626735 EST1159811 Sequencing ESTs from lobl... 98 2e-021
gb|CO412408.1|CO412408 EST842793 Sequencing ESTs from loblo... 98 2e-021
gb|DN452317.1|DN452317 EST948116 Sequencing ESTs from loblo... 98 2e-021
gb|CV136199.1|CV136199 EST847408 Sequencing ESTs from loblo... 98 2e-021
gb|DN447482.1|DN447482 EST943281 Sequencing ESTs from loblo... 98 2e-021
gb|DN456471.1|DN456471 EST952270 Sequencing ESTs from loblo... 98 2e-021
gb|CO411548.1|CO411548 EST841933 Sequencing ESTs from loblo... 98 2e-021
gb|CO414624.1|CO414624 EST845009 Sequencing ESTs from loblo... 98 2e-021
>gb|CX650454.1|CX650454 COLD1_45_F10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_F10_A029 5', mRNA sequence
Length = 826
Score = 299 bits (648), Expect(2) = 5e-083
Identities = 112/143 (78%), Positives = 128/143 (89%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 46 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 225
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 226 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 405
Query: 760 DPVTHRPIAADAVTVTTVSFQPS 692
DP +HRP+ + TT P+
Sbjct: 406 DPQSHRPLGQPHNSNTTCPSLPA 474
Score = 166 bits (356), Expect = 4e-040
Identities = 83/137 (60%), Positives = 89/137 (64%)
Frame = +3 / -3
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 455 VVLLLCGWPRGRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 276
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A L
Sbjct: 275 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSL 96
Query: 1071 VHAPLLVCAFSQQGDRP 1121
VHAPL V AFSQQGD P
Sbjct: 95 VHAPLFV*AFSQQGDLP 45
Score = 29.5 bits (58), Expect(2) = 5e-083
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 598 PDLNLDLCISLP 633
>gb|DR024153.1|DR024153 STRS1_62_E05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_62_E05_A034 5', mRNA sequence
Length = 791
Score = 299 bits (648), Expect(2) = 5e-083
Identities = 112/143 (78%), Positives = 128/143 (89%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 41 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 220
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 221 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 400
Query: 760 DPVTHRPIAADAVTVTTVSFQPS 692
DP +HRP+ + TT P+
Sbjct: 401 DPQSHRPLGQPHNSNTTCPSLPA 469
Score = 166 bits (356), Expect = 4e-040
Identities = 83/137 (60%), Positives = 89/137 (64%)
Frame = +3 / -3
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 450 VVLLLCGWPRGRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 271
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A L
Sbjct: 270 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSL 91
Query: 1071 VHAPLLVCAFSQQGDRP 1121
VHAPL V AFSQQGD P
Sbjct: 90 VHAPLFV*AFSQQGDLP 40
Score = 29.5 bits (58), Expect(2) = 5e-083
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 593 PDLNLDLCISLP 628
>gb|CF388213.1|CF388213 RTDR2_1_B07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_B07_A021 5', mRNA sequence
Length = 712
Score = 299 bits (648), Expect(2) = 5e-083
Identities = 112/143 (78%), Positives = 128/143 (89%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 57 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 236
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 237 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 416
Query: 760 DPVTHRPIAADAVTVTTVSFQPS 692
DP +HRP+ + TT P+
Sbjct: 417 DPQSHRPLGQPHNSNTTCPSLPA 485
Score = 166 bits (356), Expect = 4e-040
Identities = 83/137 (60%), Positives = 89/137 (64%)
Frame = +3 / -1
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 466 VVLLLCGWPRGRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 287
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A L
Sbjct: 286 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSL 107
Query: 1071 VHAPLLVCAFSQQGDRP 1121
VHAPL V AFSQQGD P
Sbjct: 106 VHAPLFV*AFSQQGDLP 56
Score = 29.5 bits (58), Expect(2) = 5e-083
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 609 PDLNLDLCISLP 644
>gb|DR060728.1|DR060728 RTNIT1_29_D06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_29_D06_A029 5', mRNA sequence
Length = 726
Score = 297 bits (644), Expect(2) = 2e-082
Identities = 111/143 (77%), Positives = 127/143 (88%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+G WTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 29 GRSPCCEKAHTNKGGWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 208
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 209 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 388
Query: 760 DPVTHRPIAADAVTVTTVSFQPS 692
DP +HRP+ + TT P+
Sbjct: 389 DPQSHRPLGQPHNSNTTCPSLPA 457
Score = 163 bits (351), Expect = 2e-039
Identities = 82/137 (59%), Positives = 88/137 (64%)
Frame = +3 / -1
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 438 VVLLLCGWPRGRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 259
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A L
Sbjct: 258 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSL 79
Query: 1071 VHAPLLVCAFSQQGDRP 1121
VH PL V AFSQQGD P
Sbjct: 78 VHPPLFV*AFSQQGDLP 28
Score = 29.5 bits (58), Expect(2) = 2e-082
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 581 PDLNLDLCISLP 616
>gb|BX681391.1|BX681391 BX681391 RS Pinus pinaster cDNA clone RS58C06, mRNA sequence
Length = 605
Score = 298 bits (645), Expect(2) = 8e-082
Identities = 109/128 (85%), Positives = 123/128 (96%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 3 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 182
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 183 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 362
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 363 DPQSHRPL 386
Score = 166 bits (358), Expect = 2e-040
Identities = 83/137 (60%), Positives = 90/137 (65%)
Frame = +3 / -2
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
+V + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 412 IVLLLCGWPRGR*DWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 233
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM*A L
Sbjct: 232 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRM*AMRRSSSSL 53
Query: 1071 VHAPLLVCAFSQQGDRP 1121
VHAPL V AFSQQGD P
Sbjct: 52 VHAPLFV*AFSQQGDLP 2
Score = 29.5 bits (58), Expect(2) = 8e-082
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 555 PDLNLDLCISLP 590
>gb|CF387084.1|CF387084 RTDR1_10_E10.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_10_E10_A015 5', mRNA
sequence
Length = 733
Score = 294 bits (637), Expect(2) = 2e-081
Identities = 111/143 (77%), Positives = 127/143 (88%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRS CCEKAHTN+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 15 GRSFCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 194
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 195 RPDLKRGNFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGL 374
Query: 760 DPVTHRPIAADAVTVTTVSFQPS 692
DP +HRP+ + TT P+
Sbjct: 375 DPQSHRPLGQPHNSNTTCPSLPA 443
Score = 162 bits (348), Expect = 5e-039
Identities = 82/137 (59%), Positives = 88/137 (64%)
Frame = +3 / -1
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 424 VVLLLCGWPRGRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 245
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A L
Sbjct: 244 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSL 65
Query: 1071 VHAPLLVCAFSQQGDRP 1121
VHAPL V AFSQQ D P
Sbjct: 64 VHAPLFV*AFSQQKDLP 14
Score = 29.5 bits (58), Expect(2) = 2e-081
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 567 PDLNLDLCISLP 602
>gb|DR161238.1|DR161238 RTFE1_10_D10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_D10_A029 5', mRNA sequence
Length = 766
Score = 292 bits (632), Expect(2) = 3e-079
Identities = 109/137 (79%), Positives = 124/137 (90%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTK+ED+RL+A+IRAHGEG WRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 24 GRSPCCEKAHTNKGAWTKQEDDRLIAHIRAHGEGSWRSLPKAAGLLRCGKSCRLRWINYL 203
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS +GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +G+
Sbjct: 204 RPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGL 383
Query: 760 DPVTHRPIAADAVTVTT 710
DP THRP+ T T
Sbjct: 384 DPQTHRPLGQPNNTPVT 434
Score = 182 bits (393), Expect = 3e-045
Identities = 87/127 (68%), Positives = 93/127 (73%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS PL S+F CVFQ*F ISLSVRPG+ A+ DHL P + SL M SSSS+VKL
Sbjct: 403 GRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVKL 224
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IHRS QLLPH S PAALG +RQ PSP ARM*A LV APLLV AF
Sbjct: 223 PRFRSGRR*FIHRSLQLLPHLSSPAALGRERQLPSPWARM*AIRRSSSCLVQAPLLV*AF 44
Query: 1101 SQQGDRP 1121
SQ GDRP
Sbjct: 43 SQHGDRP 23
Score = 27.2 bits (53), Expect(2) = 3e-079
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 628 PDLNLDLCISPP 593
PDLNL+LCIS P
Sbjct: 564 PDLNLNLCISLP 599
>gb|DR117116.1|DR117116 RTMG1_4_G10.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_4_G10_A029 5', mRNA sequence
Length = 805
Score = 291 bits (630), Expect(2) = 6e-079
Identities = 109/137 (79%), Positives = 124/137 (90%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTK+ED+RL+A+IRAHGEG WRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 25 GRSPCCEKAHTNKGAWTKQEDDRLIAHIRAHGEGGWRSLPKAAGLLRCGKSCRLRWINYL 204
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS +GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +G+
Sbjct: 205 RPDLKRGSFTEEEDELIIKLHSFVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSKGL 384
Query: 760 DPVTHRPIAADAVTVTT 710
DP THRP+ T T
Sbjct: 385 DPQTHRPLGQPNNTPVT 435
Score = 183 bits (394), Expect = 2e-045
Identities = 87/127 (68%), Positives = 93/127 (73%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS PL S+F CVFQ*F ISLSVRPG+ A+ DHL P + SL M SSSS+VKL
Sbjct: 404 GRWVWGSSPLLSNFLLMCVFQ*FFISLSVRPGNLPAIKDHLLPTKEWSLMMSSSSSSVKL 225
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IHRS QLLPH S PAALG +RQ PSP ARM*A LV APLLV AF
Sbjct: 224 PRFRSGRR*FIHRSLQLLPHLSSPAALGRERQPPSPWARM*AIRRSSSCLVQAPLLV*AF 45
Query: 1101 SQQGDRP 1121
SQ GDRP
Sbjct: 44 SQHGDRP 24
Score = 27.2 bits (53), Expect(2) = 6e-079
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +1
Query: 628 PDLNLDLCISPP 593
PDLNL+LCIS P
Sbjct: 565 PDLNLNLCISLP 600
>gb|BF517838.1|BF517838 NXSI_027_G09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_027_G09 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 292 bits (632), Expect = 3e-078
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYL
Sbjct: 96 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYL 275
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGN + +ED+LI+KLHSLLGNKWSLIA LPGRTDNEIKNYWNTH++RKLL RG+
Sbjct: 276 RPDLKRGNXSEEEDELIIKLHSLLGNKWSLIAXXLPGRTDNEIKNYWNTHIKRKLLNRGL 455
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 456 DPQSHRPL 479
Score = 163 bits (350), Expect = 2e-039
Identities = 80/127 (62%), Positives = 85/127 (66%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL M SSSS+
Sbjct: 475 GRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNXXAIRDHLLPSREWSLMMSSSSSSEXF 296
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A LVHAPL V AF
Sbjct: 295 PRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSLVHAPLFV*AF 116
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 115 SQQGDLP 95
>gb|CO200901.1|CO200901 RTCNT2_2_G06.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_G06_A029 3', mRNA sequence
Length = 863
Score = 291 bits (630), Expect(2) = 3e-078
Identities = 105/128 (82%), Positives = 124/128 (96%)
Frame = -2 / -3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+RL+A+IRAHGEGCWRSLP AAGLLRCGKSCRLRWINYL
Sbjct: 822 GRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPTAAGLLRCGKSCRLRWINYL 643
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPD+KRGNF+++ED+LI++LHSL+GNKWSLIAA+LPGRTDNEIKNYWN+H++RKL+ RG
Sbjct: 642 RPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRKLVSRGF 463
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 462 DPGSHRPL 439
Score = 165 bits (354), Expect = 7e-040
Identities = 81/127 (63%), Positives = 88/127 (69%)
Frame = +3 / +2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL ++F FQ*FLISLSVRPG+ AA+ DHLFP R S M SSSS K
Sbjct: 443 GRWDPGSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLFPIRE*SWMMSSSSSDEKF 622
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR SGR+* IHRS QL PHRS PAA+GS+RQ PSP ARM*A LVHAPL V AF
Sbjct: 623 PRLISGRK*FIHRSLQLFPHRSSPAAVGSERQQPSPWARM*AMRRSSSSLVHAPLFV*AF 802
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 803 SQQGDLP 823
Score = 24.9 bits (48), Expect(2) = 3e-078
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 628 PDLNLDLCISPP 593
PDL+L+LCIS P
Sbjct: 273 PDLDLNLCISLP 238
>gb|DR161095.1|DR161095 RTFE1_9_G03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_9_G03_A029 5', mRNA sequence
Length = 760
Score = 288 bits (623), Expect(2) = 3e-077
Identities = 104/128 (81%), Positives = 123/128 (96%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED+ L+A+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 53 GRSPCCEKAHTNKGAWTKEEDDHLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 232
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPD+KRGNF+++ED+LI++LHSL+GNKWSLIAA+LPGRTDNEIKNYWN+H++RKL+ RG
Sbjct: 233 RPDIKRGNFSSEEDELIIQLHSLIGNKWSLIAAKLPGRTDNEIKNYWNSHIKRKLVSRGF 412
Query: 760 DPVTHRPI 737
DP +HR +
Sbjct: 413 DPRSHRTL 436
Score = 160 bits (345), Expect = 1e-038
Identities = 79/122 (64%), Positives = 85/122 (69%)
Frame = +3 / -2
Query: 756 GSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRS 935
GS PL ++F FQ*FLISLSVRPG+ AA+ DHL P R S M SSSS K PR S
Sbjct: 417 GSNPLLTNFLLMWEFQ*FLISLSVRPGNFAAIRDHLLPIRE*SWMMSSSSSDEKFPRLIS 238
Query: 936 GRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQQGD 1115
GR+* IHRS QL PHRS PAALGS+RQ PSP ARM*A LVHAPL V AFSQQGD
Sbjct: 237 GRK*FIHRSLQLFPHRSSPAALGSERQQPSPWARM*AMRWSSSSLVHAPLFV*AFSQQGD 58
Query: 1116 RP 1121
P
Sbjct: 57 LP 52
Score = 24.9 bits (48), Expect(2) = 3e-077
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 628 PDLNLDLCISPP 593
PDL+L+LCIS P
Sbjct: 602 PDLDLNLCISLP 637
>gb|DR168212.1|DR168212 RTPHOS1_23_H12.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_23_H12_A029 5', mRNA sequence
Length = 600
Score = 286 bits (618), Expect(2) = 2e-076
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 6 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 185
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GI
Sbjct: 186 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 365
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 366 DPQSHRPL 389
Score = 164 bits (352), Expect = 1e-039
Identities = 81/127 (63%), Positives = 87/127 (68%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 385 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 206
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 205 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 26
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 25 SQQGDLP 5
Score = 23.5 bits (45), Expect(2) = 2e-076
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +1
Query: 625 DLNLDLCISPP 593
DLNL LCIS P
Sbjct: 559 DLNLSLCISLP 591
>gb|DR111427.1|DR111427 RTS1_17_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_17_F02_A029 5', mRNA sequence
Length = 630
Score = 286 bits (618), Expect(2) = 3e-076
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 14 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 193
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GI
Sbjct: 194 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 373
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 374 DPQSHRPL 397
Score = 164 bits (352), Expect = 1e-039
Identities = 81/127 (63%), Positives = 87/127 (68%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 393 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 214
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 213 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 34
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 33 SQQGDLP 13
Score = 23.5 bits (45), Expect(2) = 3e-076
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +2
Query: 625 DLNLDLCISPP 593
DLNL LCIS P
Sbjct: 566 DLNLSLCISLP 598
>gb|CF388652.1|CF388652 RTDR2_4_A10.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_4_A10_A021 5', mRNA sequence
Length = 760
Score = 286 bits (618), Expect = 3e-076
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 28 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 207
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GI
Sbjct: 208 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 387
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 388 DPQSHRPL 411
Score = 164 bits (352), Expect = 1e-039
Identities = 81/127 (63%), Positives = 87/127 (68%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 407 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 228
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 227 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 48
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 47 SQQGDLP 27
>gb|CV034082.1|CV034082 RTNACL1_38_B11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_B11_A029 5', mRNA sequence
Length = 734
Score = 286 bits (618), Expect = 3e-076
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 5 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 184
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GI
Sbjct: 185 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 364
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 365 DPQSHRPL 388
Score = 164 bits (352), Expect = 1e-039
Identities = 81/127 (63%), Positives = 87/127 (68%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 384 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 205
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 204 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 25
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 24 SQQGDLP 4
>gb|DR387764.1|DR387764 RTHG1_24_A11.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_24_A11_A029 3', mRNA sequence
Length = 796
Score = 286 bits (618), Expect = 3e-076
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / -3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 788 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 609
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GI
Sbjct: 608 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 429
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 428 DPQSHRPL 405
Score = 164 bits (352), Expect = 1e-039
Identities = 81/127 (63%), Positives = 87/127 (68%)
Frame = +3 / +1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 409 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 588
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 589 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 768
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 769 SQQGDLP 789
>gb|DR387774.1|DR387774 RTHG1_24_B11.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_24_B11_A029 3', mRNA sequence
Length = 781
Score = 286 bits (618), Expect = 3e-076
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = -2 / -3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 764 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 585
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GI
Sbjct: 584 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGI 405
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 404 DPQSHRPL 381
Score = 164 bits (352), Expect = 1e-039
Identities = 81/127 (63%), Positives = 87/127 (68%)
Frame = +3 / +1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 385 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 564
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 565 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 744
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 745 SQQGDLP 765
>gb|AW011253.1|AW011253 ST18F02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18F02, mRNA sequence
Length = 578
Score = 283 bits (613), Expect = 1e-075
Identities = 103/131 (78%), Positives = 122/131 (93%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEK HTN+GAW+K+EDE LVAYI+AHGEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 20 GRAPCCEKTHTNKGAWSKDEDEALVAYIQAHGEGSWRSLPKAAGLQRCGKSCRLRWINYL 199
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ +ED++I+KLHS+LGNKWSLIA++LPGRTDNEIKNYWNTH++RK+L RG+
Sbjct: 200 RPDLKRGNFSPEEDEIIIKLHSMLGNKWSLIASKLPGRTDNEIKNYWNTHIKRKMLERGL 379
Query: 760 DPVTHRPIAAD 728
DP TH P+ +D
Sbjct: 380 DPSTHLPLMSD 412
Score = 156 bits (335), Expect = 3e-037
Identities = 77/127 (60%), Positives = 84/127 (66%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS PL + F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS +KL
Sbjct: 399 GRWVEGSRPLSNIFLLM*VFQ*FFISLSVRPGNLLAIKDHLLPNIE*SLIMISSSSGLKL 220
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IH S QLLPHR PAALG +RQ PSP A + AT L+ APL V F
Sbjct: 219 PRLRSGRR*FIHLSLQLLPHRCNPAALGRERQLPSPWA*IYATSASSSSLLQAPLFVWVF 40
Query: 1101 SQQGDRP 1121
SQQG RP
Sbjct: 39 SQQGARP 19
>gb|DR164052.1|DR164052 RTFE1_46_B11.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_B11_A029 5', mRNA sequence
Length = 834
Score = 283 bits (612), Expect = 2e-075
Identities = 106/128 (82%), Positives = 120/128 (93%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYL
Sbjct: 45 GRSPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYL 224
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGR DNEIKNYWNTH++RKLL +GI
Sbjct: 225 RPDLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRMDNEIKNYWNTHIKRKLLIKGI 404
Query: 760 DPVTHRPI 737
DP +HRP+
Sbjct: 405 DPQSHRPL 428
Score = 163 bits (351), Expect = 2e-039
Identities = 80/127 (62%), Positives = 87/127 (68%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLS+RPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 424 GRWDWGSIPLISNFLLM*VFQ*FFISLSIRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 245
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 244 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 65
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 64 SQQGDLP 44
>gb|CF401736.1|CF401736 RTWW1_14_C05.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_14_C05_A015 5', mRNA sequence
Length = 792
Score = 281 bits (607), Expect = 9e-075
Identities = 105/126 (83%), Positives = 119/126 (94%)
Frame = -2 / +3
Query: 1114 SPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRP 935
SPCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYLRP
Sbjct: 3 SPCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRP 182
Query: 934 DLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDP 755
DLKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GIDP
Sbjct: 183 DLKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDP 362
Query: 754 VTHRPI 737
+HRP+
Sbjct: 363 QSHRPL 380
Score = 161 bits (347), Expect = 6e-039
Identities = 80/125 (64%), Positives = 86/125 (68%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 376 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 197
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 196 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 17
Query: 1101 SQQGD 1115
SQQGD
Sbjct: 16 SQQGD 2
>gb|DR111301.1|DR111301 RTS1_16_F03.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_F03_A029 5', mRNA sequence
Length = 729
Score = 281 bits (607), Expect = 9e-075
Identities = 104/128 (81%), Positives = 119/128 (92%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GRSPCCEKAHTN+GAWTKEED RL+A+IRAHGEG WRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 17 GRSPCCEKAHTNKGAWTKEEDRRLIAHIRAHGEGGWRSLPKAAGLLRCGKSCRLRWINYL 196
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG FT +ED+LI+KLH++LGNKWSLIA RL GRTDNEIKNYWN+H+++KLL +G+
Sbjct: 197 RPDLKRGGFTEEEDELIIKLHAVLGNKWSLIAGRLAGRTDNEIKNYWNSHIKKKLLSKGL 376
Query: 760 DPVTHRPI 737
DP TH P+
Sbjct: 377 DPKTHCPL 400
Score = 162 bits (349), Expect = 3e-039
Identities = 78/127 (61%), Positives = 88/127 (69%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
G+ V GS PL S+F +FQ*F ISLSVRP + A+ DHLFPR C+L + SSSS+VK
Sbjct: 396 GQWVLGSSPLLSNFFLM*LFQ*FFISLSVRPANLPAIRDHLFPRTACNLMISSSSSSVKP 217
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH S PAALG +RQ PSP A + A LV APLLV AF
Sbjct: 216 PRLRSGRR*FIHRSLQLFPHLSNPAALGRERQPPSPWALIWAMRRRSSSLVQAPLLV*AF 37
Query: 1101 SQQGDRP 1121
SQQGD P
Sbjct: 36 SQQGDLP 16
>gb|DR178268.1|DR178268 RTMNUT1_10_C01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_10_C01_A029 5', mRNA sequence
Length = 719
Score = 279 bits (603), Expect = 3e-074
Identities = 104/125 (83%), Positives = 118/125 (94%)
Frame = -2 / +1
Query: 1111 PCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPD 932
PCCEKAHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYLRPD
Sbjct: 1 PCCEKAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPD 180
Query: 931 LKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPV 752
LKRG+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GIDP
Sbjct: 181 LKRGSFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQ 360
Query: 751 THRPI 737
+HRP+
Sbjct: 361 SHRPL 375
Score = 156 bits (335), Expect = 3e-037
Identities = 78/123 (63%), Positives = 84/123 (68%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 371 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 192
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV AF
Sbjct: 191 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV*AF 12
Query: 1101 SQQ 1109
SQQ
Sbjct: 11 SQQ 3
>gb|DR111240.1|DR111240 RTS1_16_G05.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_16_G05_A029 3', mRNA sequence
Length = 625
Score = 269 bits (582), Expect(2) = 6e-074
Identities = 102/136 (75%), Positives = 119/136 (87%)
Frame = -2 / -3
Query: 1099 KAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG 920
K+ N+GAWTKEED+RL+A+IR HGEGCWRSLPKAAGL+RCGKSCRLRWINYLRPDLKRG
Sbjct: 614 KSS*NKGAWTKEEDDRLIAHIRTHGEGCWRSLPKAAGLMRCGKSCRLRWINYLRPDLKRG 435
Query: 919 NFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRP 740
NF+ +ED+LI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+DP +HRP
Sbjct: 434 NFSEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLNRGLDPQSHRP 255
Query: 739 IAADAVTVTTVSFQPS 692
+ + TT P+
Sbjct: 254 LGQPHNSNTTCPSLPA 207
Score = 147 bits (316), Expect = 1e-034
Identities = 75/131 (57%), Positives = 82/131 (62%)
Frame = +3 / +1
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV + GR GS PL S+F VFQ*F ISLSVRPG+ A+ DHL P R SL
Sbjct: 226 VVLLLCGWPRGRWDWGSSPLFSNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPSREWSLM 405
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSSS+ K PRFRSGRR* IHRS QL P R PAALGS+RQ PSP RM A L
Sbjct: 406 MSSSSSSEKFPRFRSGRR*FIHRSLQLFPQRISPAALGSERQQPSP*VRMWAMRRSSSSL 585
Query: 1071 VHAPLLVCAFS 1103
VHAPL F+
Sbjct: 586 VHAPLFYELFT 618
Score = 29.5 bits (58), Expect(2) = 6e-074
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 83 PDLNLDLCISLP 48
>gb|DR744198.1|DR744198 RTCU1_20_G08.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_G08_A029 5', mRNA sequence
Length = 644
Score = 277 bits (599), Expect = 1e-073
Identities = 102/127 (80%), Positives = 115/127 (90%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC N+GAWTKEED+RL+ YI+ HGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 82 GRAPCCSNGDRNKGAWTKEEDDRLIQYIKVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 261
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ GI
Sbjct: 262 RPDLKRGFFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGI 441
Query: 760 DPVTHRP 740
DP+THRP
Sbjct: 442 DPLTHRP 462
Score = 168 bits (362), Expect = 5e-041
Identities = 78/127 (61%), Positives = 86/127 (67%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS+P+ SFR C FQ*F ISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 461 GRWVRGSIPMLISFRFRCEFQ*FFISLSVRPGKRPAIKDHLFPRRACSLRIRSSSSSEKN 282
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PR RSGRR* IH S QLLPHRSRPAALG +RQ PSP + LV APL +
Sbjct: 281 PRLRSGRR*FIHLSLQLLPHRSRPAALGRERQQPSP*TLIYWISLSSSSLVQAPLFLSPL 102
Query: 1101 SQQGDRP 1121
QQG P
Sbjct: 101 EQQGALP 81
>gb|DR014768.1|DR014768 HEAT1_51_B07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 5', mRNA sequence
Length = 928
Score = 272 bits (588), Expect(2) = 8e-073
Identities = 104/144 (72%), Positives = 122/144 (84%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEKAHTN+GAWT+EED RLVA+I+AHGEG WRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 40 GRTPCCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYL 219
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ ED+LI+K HS LGNKWSLIA LPGRTDNEIKN+WNTH+++KL+ G+
Sbjct: 220 RPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGL 399
Query: 760 DPVTHRPIAADAVTVTTVSFQPSP 689
DP +H P+ + TT + SP
Sbjct: 400 DPKSHLPLGEPRDSNTTYTVLASP 471
Score = 169 bits (363), Expect = 4e-041
Identities = 81/137 (59%), Positives = 92/137 (67%)
Frame = +3 / -3
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV ++ + GR GS P+ ++F CVFQ F ISLSVRPG A+ DHLFPRR +L
Sbjct: 449 VVLLSRGSPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPRREWNLM 270
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSS + K PRF+SGRR* IHRS QL PHRS PAALG +RQ PSPCA M AT
Sbjct: 269 MSSSSCSEKFPRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPCA*MCATRRASSS* 90
Query: 1071 VHAPLLVCAFSQQGDRP 1121
V APLLV AFSQQG P
Sbjct: 89 VQAPLLV*AFSQQGVLP 39
Score = 23.1 bits (44), Expect(2) = 8e-073
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 628 PDLNLDLCISPP 593
P+LNLDL IS P
Sbjct: 589 PELNLDLSISLP 624
>gb|CF393225.1|CF393225 RTDR3_17_D12.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_17_D12_A022 5', mRNA
sequence
Length = 659
Score = 271 bits (587), Expect = 5e-072
Identities = 100/127 (78%), Positives = 114/127 (89%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 46 GRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 225
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+
Sbjct: 226 RPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGV 405
Query: 760 DPVTHRP 740
DP+T RP
Sbjct: 406 DPLTRRP 426
Score = 168 bits (361), Expect = 7e-041
Identities = 80/127 (62%), Positives = 88/127 (69%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 425 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 246
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 245 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 66
Query: 1101 SQQGDRP 1121
+QQG P
Sbjct: 65 AQQGALP 45
>gb|CF472757.1|CF472757 RTDS1_11_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_D09_A015 5', mRNA sequence
Length = 667
Score = 271 bits (587), Expect = 5e-072
Identities = 100/127 (78%), Positives = 114/127 (89%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 17 GRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 196
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+
Sbjct: 197 RPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGV 376
Query: 760 DPVTHRP 740
DP+T RP
Sbjct: 377 DPLTRRP 397
Score = 168 bits (361), Expect = 7e-041
Identities = 80/127 (62%), Positives = 88/127 (69%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 396 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 217
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 216 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 37
Query: 1101 SQQGDRP 1121
+QQG P
Sbjct: 36 AQQGALP 16
>gb|CO367178.1|CO367178 RTK1_32_E03.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_E03_A029 5', mRNA sequence
Length = 873
Score = 271 bits (587), Expect = 5e-072
Identities = 100/127 (78%), Positives = 114/127 (89%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 19 GRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 198
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+
Sbjct: 199 RPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGV 378
Query: 760 DPVTHRP 740
DP+T RP
Sbjct: 379 DPLTRRP 399
Score = 168 bits (361), Expect = 7e-041
Identities = 80/127 (62%), Positives = 88/127 (69%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 398 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 219
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 218 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 39
Query: 1101 SQQGDRP 1121
+QQG P
Sbjct: 38 AQQGALP 18
>gb|DR023090.1|DR023090 STRS1_55_A05.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_55_A05_A034 5', mRNA sequence
Length = 752
Score = 271 bits (587), Expect = 5e-072
Identities = 100/127 (78%), Positives = 114/127 (89%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 24 GRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 203
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+
Sbjct: 204 RPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGV 383
Query: 760 DPVTHRP 740
DP+T RP
Sbjct: 384 DPLTRRP 404
Score = 168 bits (361), Expect = 7e-041
Identities = 80/127 (62%), Positives = 88/127 (69%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 403 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 224
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 223 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 44
Query: 1101 SQQGDRP 1121
+QQG P
Sbjct: 43 AQQGALP 23
>gb|DR161451.1|DR161451 RTFE1_11_H03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_H03_A029 5', mRNA sequence
Length = 669
Score = 271 bits (587), Expect = 5e-072
Identities = 100/127 (78%), Positives = 114/127 (89%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 24 GRAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 203
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+
Sbjct: 204 RPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGV 383
Query: 760 DPVTHRP 740
DP+T RP
Sbjct: 384 DPLTRRP 404
Score = 168 bits (361), Expect = 7e-041
Identities = 80/127 (62%), Positives = 88/127 (69%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 403 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 224
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 223 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 44
Query: 1101 SQQGDRP 1121
+QQG P
Sbjct: 43 AQQGALP 23
>gb|CF667045.1|CF667045 RTCNT1_27_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_27_G11_A029 5', mRNA sequence
Length = 744
Score = 268 bits (579), Expect(2) = 1e-071
Identities = 103/144 (71%), Positives = 121/144 (84%)
Frame = -2 / +3
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCC KAHTN+GAWT+EED RLVA+I+AHGEG WRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 6 GRTPCC*KAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYL 185
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ ED+LI+K HS LGNKWSLIA LPGRTDNEIKN+WNTH+++KL+ G+
Sbjct: 186 RPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGL 365
Query: 760 DPVTHRPIAADAVTVTTVSFQPSP 689
DP +H P+ + TT + SP
Sbjct: 366 DPKSHLPLGEPRDSNTTYTVLASP 437
Score = 165 bits (355), Expect = 5e-040
Identities = 80/137 (58%), Positives = 91/137 (66%)
Frame = +3 / -3
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV ++ + GR GS P+ ++F CVFQ F ISLSVRPG A+ DHLFPRR +L
Sbjct: 415 VVLLSRGSPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPRREWNLM 236
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSS + K PRF+SGRR* IHRS QL PHRS PAALG +RQ PSPCA M AT
Sbjct: 235 MSSSSCSEKFPRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPCA*MCATRRASSS* 56
Query: 1071 VHAPLLVCAFSQQGDRP 1121
V APLLV AF QQG P
Sbjct: 55 VQAPLLV*AF*QQGVLP 5
Score = 23.1 bits (44), Expect(2) = 1e-071
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 628 PDLNLDLCISPP 593
P+LNLDL IS P
Sbjct: 555 PELNLDLSISLP 590
>gb|CX648418.1|CX648418 COLD1_28_B12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_28_B12_A029 5', mRNA sequence
Length = 868
Score = 251 bits (543), Expect(2) = 2e-071
Identities = 95/115 (82%), Positives = 108/115 (93%)
Frame = -2 / +3
Query: 1081 GAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADE 902
GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYLRPDLKRG+FT +E
Sbjct: 48 GAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEEE 227
Query: 901 DDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPI 737
D+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GIDP +HRP+
Sbjct: 228 DELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 392
Score = 141 bits (303), Expect(2) = 5e-035
Identities = 70/114 (61%), Positives = 76/114 (66%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 388 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 209
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V AP
Sbjct: 208 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAP 47
Score = 38.6 bits (78), Expect(2) = 2e-071
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 1120 GRSPCCEKAHTNRGAWTKEE 1061
GRSPCCEKAHT +G K++
Sbjct: 10 GRSPCCEKAHTTKGPGQKKK 69
Score = 27.2 bits (53), Expect(2) = 5e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 1080 PLLVCAFSQQGDRP 1121
PL+V AFSQQGD P
Sbjct: 50 PLVV*AFSQQGDLP 9
>gb|DR011035.1|DR011035 HEAT1_3_A03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_A03_A029 3', mRNA sequence
Length = 790
Score = 269 bits (581), Expect = 3e-071
Identities = 99/127 (77%), Positives = 113/127 (88%)
Frame = -2 / -1
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
G +PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 778 GSAPCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 599
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+
Sbjct: 598 RPDLKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGV 419
Query: 760 DPVTHRP 740
DP+T RP
Sbjct: 418 DPLTRRP 398
Score = 168 bits (361), Expect = 7e-041
Identities = 80/127 (62%), Positives = 88/127 (69%)
Frame = +3 / +3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 399 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 578
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 579 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 758
Query: 1101 SQQGDRP 1121
+QQG P
Sbjct: 759 AQQGALP 779
>gb|BQ701670.1|BQ701670 NXSI_118_C02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_118_C02 5' similar to Arabidopsis thaliana
sequence At4g38620 putative transcription factor (MYB4)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 268 bits (580), Expect = 5e-071
Identities = 103/144 (71%), Positives = 121/144 (84%)
Frame = -2 / +2
Query: 1120 GRSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 941
GR+PCCEKAHTN+GAWT+EED RLVA+I+AHGEG WRSLPKAAGLLRCGKSCRLRWINYL
Sbjct: 29 GRTPCCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYL 208
Query: 940 RPDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGI 761
RPDLKRGNF+ ED+LI+K HS LGNKWSLIA LPGRTDNEIKN+WNTH+++KL+ G+
Sbjct: 209 RPDLKRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGL 388
Query: 760 DPVTHRPIAADAVTVTTVSFQPSP 689
D +H P+ + TT + SP
Sbjct: 389 DSKSHLPLGEPRDSNTTYTVLASP 460
Score = 165 bits (355), Expect = 5e-040
Identities = 80/137 (58%), Positives = 91/137 (66%)
Frame = +3 / -1
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV ++ + GR S P+ ++F CVFQ F ISLSVRPG A+ DHLFPRR +L
Sbjct: 438 VVLLSRGSPSGR*DLESSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPRREWNLM 259
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSS + K PRF+SGRR* IHRS QL PHRS PAALG +RQ PSPCA M AT
Sbjct: 258 MSSSSCSEKFPRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPCA*MCATRRASSS* 79
Query: 1071 VHAPLLVCAFSQQGDRP 1121
V APLLV AFSQQG P
Sbjct: 78 VQAPLLV*AFSQQGVLP 28
>gb|DR099337.1|DR099337 STRR1_54_G08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_G08_A033 5', mRNA sequence
Length = 499
Score = 266 bits (575), Expect = 2e-070
Identities = 98/124 (79%), Positives = 111/124 (89%)
Frame = -2 / +3
Query: 1111 PCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPD 932
PCC ++GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPD
Sbjct: 3 PCCANGDRSKGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPD 182
Query: 931 LKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPV 752
LKRG F+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+DP+
Sbjct: 183 LKRGGFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPL 362
Query: 751 THRP 740
T RP
Sbjct: 363 TRRP 374
Score = 166 bits (358), Expect = 2e-040
Identities = 79/124 (63%), Positives = 87/124 (70%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 373 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 194
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV APLL+
Sbjct: 193 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAPLLLSPL 14
Query: 1101 SQQG 1112
+QQG
Sbjct: 13 AQQG 2
>gb|DR014691.1|DR014691 HEAT1_51_B07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B07_A029 3', mRNA sequence
Length = 906
Score = 263 bits (569), Expect(2) = 3e-070
Identities = 101/140 (72%), Positives = 118/140 (84%)
Frame = -2 / +1
Query: 1108 CCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 929
CCEKAHTN+GAWT+EED RLVA+I+AHGEG WRSLPKAAGLLRCGKSCRLRWINYLRPDL
Sbjct: 1 CCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYLRPDL 180
Query: 928 KRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVT 749
KRGNF+ ED+LI+K HS LGNKWSLIA LPGRTDNEIKN+WNTH+++KL+ G+DP +
Sbjct: 181 KRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKS 360
Query: 748 HRPIAADAVTVTTVSFQPSP 689
H P+ + TT + SP
Sbjct: 361 HLPLGEPRDSNTTYTVLASP 420
Score = 163 bits (350), Expect = 2e-039
Identities = 78/132 (59%), Positives = 89/132 (67%)
Frame = +3 / -2
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV ++ + GR GS P+ ++F CVFQ F ISLSVRPG A+ DHLFPRR +L
Sbjct: 398 VVLLSRGSPSGR*DLGSSPILTNFFLMCVFQWFFISLSVRPGKIRAIRDHLFPRREWNLM 219
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSS + K PRF+SGRR* IHRS QL PHRS PAALG +RQ PSPCA M AT
Sbjct: 218 MSSSSCSEKFPRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPCA*MCATRRASSS* 39
Query: 1071 VHAPLLVCAFSQ 1106
V APLLV AFSQ
Sbjct: 38 VQAPLLV*AFSQ 3
Score = 23.1 bits (44), Expect(2) = 3e-070
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 628 PDLNLDLCISPP 593
P+LNLDL IS P
Sbjct: 538 PELNLDLSISLP 573
>gb|DR017658.1|DR017658 STRS1_17_E03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_E03_A034 5', mRNA sequence
Length = 724
Score = 263 bits (569), Expect(2) = 3e-070
Identities = 101/140 (72%), Positives = 118/140 (84%)
Frame = -2 / +1
Query: 1108 CCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 929
CCEKAHTN+GAWT+EED RLVA+I+AHGEG WRSLPKAAGLLRCGKSCRLRWINYLRPDL
Sbjct: 1 CCEKAHTNKGAWTQEEDARLVAHIQAHGEGGWRSLPKAAGLLRCGKSCRLRWINYLRPDL 180
Query: 928 KRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVT 749
KRGNF+ ED+LI+K HS LGNKWSLIA LPGRTDNEIKN+WNTH+++KL+ G+DP +
Sbjct: 181 KRGNFSEQEDELIIKFHSRLGNKWSLIARILPGRTDNEIKNHWNTHIKKKLVRMGLDPKS 360
Query: 748 HRPIAADAVTVTTVSFQPSP 689
H P+ + TT + SP
Sbjct: 361 HLPLGEPRDSNTTYTVLASP 420
Score = 157 bits (337), Expect = 2e-037
Identities = 77/132 (58%), Positives = 88/132 (66%)
Frame = +3 / -3
Query: 711 VVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLT 890
VV ++ + GR GS P+ ++F VFQ F ISLSVRPG A+ DHLFPRR +L
Sbjct: 398 VVLLSRGSPSGR*DLGSSPILTNFFLM*VFQWFFISLSVRPGKIRAIRDHLFPRREWNLM 219
Query: 891 MRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXL 1070
M SSS + K PRF+SGRR* IHRS QL PHRS PAALG +RQ PSPCA M AT
Sbjct: 218 MSSSSCSEKFPRFKSGRR*FIHRSLQLFPHRSNPAALGRERQPPSPCA*MCATRRASSS* 39
Query: 1071 VHAPLLVCAFSQ 1106
V APLLV AFSQ
Sbjct: 38 VQAPLLV*AFSQ 3
Score = 23.1 bits (44), Expect(2) = 3e-070
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 628 PDLNLDLCISPP 593
P+LNLDL IS P
Sbjct: 535 PELNLDLSISLP 570
>gb|BX679906.1|BX679906 BX679906 RS Pinus pinaster cDNA clone RS36A06, mRNA sequence
Length = 448
Score = 264 bits (570), Expect = 1e-069
Identities = 100/123 (81%), Positives = 112/123 (91%)
Frame = -2 / +1
Query: 1087 NRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTA 908
N+GAWTKEEDERL+A+I AHGEG WRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG+F+
Sbjct: 73 NKGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSE 252
Query: 907 DEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAAD 728
+EDDLI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+DP +HRP+
Sbjct: 253 EEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPLGLP 432
Query: 727 AVT 719
T
Sbjct: 433 CKT 441
Score = 160 bits (345), Expect = 1e-038
Identities = 76/117 (64%), Positives = 83/117 (70%)
Frame = +3 / -3
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL S+F CVFQ*F ISLSVRPG+ A+SDHL PRR SL MRSSSS+ KL
Sbjct: 419 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 240
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
PRFRSGRR* IHR+ QL PHRS PAALG +R PSP A M A LV APLL+
Sbjct: 239 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSPWASMCAIRRSSSSLVQAPLLL 69
>gb|CO198121.1|CO198121 GEO1_11_A02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_11_A02_A029 5', mRNA sequence
Length = 667
Score = 264 bits (570), Expect = 1e-069
Identities = 100/123 (81%), Positives = 112/123 (91%)
Frame = -2 / +3
Query: 1087 NRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTA 908
N+GAWTKEEDERL+A+I AHGEG WRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG+F+
Sbjct: 9 NKGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSE 188
Query: 907 DEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAAD 728
+EDDLI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+DP +HRP+
Sbjct: 189 EEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPLGLP 368
Query: 727 AVT 719
T
Sbjct: 369 CKT 377
Score = 160 bits (345), Expect = 1e-038
Identities = 76/117 (64%), Positives = 83/117 (70%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL S+F CVFQ*F ISLSVRPG+ A+SDHL PRR SL MRSSSS+ KL
Sbjct: 355 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 176
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
PRFRSGRR* IHR+ QL PHRS PAALG +R PSP A M A LV APLL+
Sbjct: 175 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSPWASMCAMRRSSSSLVQAPLLL 5
>gb|CO361397.1|CO361397 NDL2_4_D03.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 5', mRNA sequence
Length = 804
Score = 264 bits (570), Expect = 1e-069
Identities = 100/123 (81%), Positives = 112/123 (91%)
Frame = -2 / +2
Query: 1087 NRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTA 908
N+GAWTKEEDERL+A+I AHGEG WRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG+F+
Sbjct: 2 NKGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSE 181
Query: 907 DEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAAD 728
+EDDLI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+DP +HRP+
Sbjct: 182 EEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPLGLP 361
Query: 727 AVT 719
T
Sbjct: 362 CKT 370
Score = 160 bits (344), Expect = 2e-038
Identities = 76/116 (65%), Positives = 82/116 (70%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL S+F CVFQ*F ISLSVRPG+ A+SDHL PRR SL MRSSSS+ KL
Sbjct: 348 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 169
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLL 1088
PRFRSGRR* IHR+ QL PHRS PAALG +R PSP A M A LV APLL
Sbjct: 168 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSPWASMCAMRRSSSSLVQAPLL 1
>gb|CF395899.1|CF395899 RTDS2_19_G06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_G06_A021 5', mRNA sequence
Length = 586
Score = 254 bits (550), Expect(2) = 1e-069
Identities = 99/135 (73%), Positives = 115/135 (85%)
Frame = -2 / +3
Query: 1093 HTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNF 914
HT +GAWT++ED RLVAYI+AHGEG WR LPKAA LLRCGKSCRLRWINYLRPDLKRGNF
Sbjct: 3 HTKKGAWTQQEDARLVAYIQAHGEGGWRYLPKAARLLRCGKSCRLRWINYLRPDLKRGNF 182
Query: 913 TADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIA 734
+ +ED+LI+KLHSLLGNKWSLIAAR+ GRTDNEIKNYWNTH++RKLL RG+DP THR +
Sbjct: 183 SEEEDELIIKLHSLLGNKWSLIAARMAGRTDNEIKNYWNTHIKRKLLSRGLDPQTHRSLC 362
Query: 733 ADAVTVTTVSFQPSP 689
+ +T+S P
Sbjct: 363 PPHNSNSTLSSPSVP 407
Score = 133 bits (286), Expect = 2e-030
Identities = 70/116 (60%), Positives = 74/116 (63%)
Frame = +3 / -1
Query: 744 RCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLP 923
R V GS PL S+F VFQ*F ISLSVRP AA+ DHL PR SL + SSSS+ K P
Sbjct: 352 RWVWGSSPLLSNFLLMWVFQ*FFISLSVRPAILAAIRDHLLPRSEWSLMISSSSSSEKFP 173
Query: 924 RFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
RFRSGRR* IHRS QL PH S AALG RQ PSP A M*AT V AP V
Sbjct: 172 RFRSGRR*FIHRSLQLFPHLSSRAALGR*RQPPSPWA*M*ATRRASSCWVQAPFFV 5
Score = 29.5 bits (58), Expect(2) = 1e-069
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 628 PDLNLDLCISPP 593
PDLNLDLCIS P
Sbjct: 525 PDLNLDLCISLP 560
>gb|CF669490.1|CF669490 RTCNT1_44_A10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_44_A10_A029 3', mRNA sequence
Length = 655
Score = 261 bits (564), Expect = 7e-069
Identities = 95/126 (75%), Positives = 112/126 (88%)
Frame = -2 / -2
Query: 1117 RSPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLR 938
R+PCC N+GAWT+EED++L+ YI+ HGEG W SLPKAAGLLRCGKSCRLRW+NYLR
Sbjct: 645 RAPCCPIGDRNKGAWTREEDDKLIQYIQTHGEGGWNSLPKAAGLLRCGKSCRLRWMNYLR 466
Query: 937 PDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGID 758
P LKRGNF+ DEDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+D
Sbjct: 465 PQLKRGNFSEDEDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVD 286
Query: 757 PVTHRP 740
P+THRP
Sbjct: 285 PLTHRP 268
Score = 167 bits (360), Expect = 1e-040
Identities = 77/124 (62%), Positives = 83/124 (66%)
Frame = +3 / +2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GRCV GS P+ SF C FQ*FLISLSVRPG R A+ DHL PRR CSL +RSSSS+ K
Sbjct: 269 GRCVRGSTPMLISFLFRCEFQ*FLISLSVRPGKRPAIRDHLLPRRACSLRIRSSSSSEKF 448
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAF 1100
PRF GRR* IH S QLLPHRSRPAALG + Q PSPC M VHAPL +
Sbjct: 449 PRFS*GRR*FIHLSLQLLPHRSRPAALGREFQPPSPCV*MYWISLSSSSRVHAPLFLSPM 628
Query: 1101 SQQG 1112
QQG
Sbjct: 629 GQQG 640
>gb|CO361315.1|CO361315 NDL2_4_D03.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_4_D03_A029 3', mRNA sequence
Length = 894
Score = 260 bits (562), Expect = 1e-068
Identities = 99/121 (81%), Positives = 110/121 (90%)
Frame = -2 / +2
Query: 1081 GAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTADE 902
GAWTKEEDERL+A+I AHGEG WRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG+F+ +E
Sbjct: 2 GAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGSFSEEE 181
Query: 901 DDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPIAADAV 722
DDLI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+DP +HRP+
Sbjct: 182 DDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQSHRPLGLPCK 361
Query: 721 T 719
T
Sbjct: 362 T 364
Score = 156 bits (336), Expect = 2e-037
Identities = 74/114 (64%), Positives = 80/114 (70%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL S+F CVFQ*F ISLSVRPG+ A+SDHL PRR SL MRSSSS+ KL
Sbjct: 342 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 163
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
PRFRSGRR* IHR+ QL PHRS PAALG +R PSP A M A LV AP
Sbjct: 162 PRFRSGRR*FIHRNLQLFPHRSSPAALGRERHEPSPWASMCAMRRSSSSLVQAP 1
>gb|CX646616.1|CX646616 COLD1_10_A05.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_10_A05_A029 5', mRNA sequence
Length = 887
Score = 260 bits (562), Expect = 1e-068
Identities = 98/121 (80%), Positives = 113/121 (93%)
Frame = -2 / +3
Query: 1099 KAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG 920
+AHTN+GAWTKEED RL+AYIRA+GEG WRSLPKAAG RCGKSCRLRWINYLRPDLKRG
Sbjct: 18 EAHTNKGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGPPRCGKSCRLRWINYLRPDLKRG 197
Query: 919 NFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRP 740
+FT +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GIDP +HRP
Sbjct: 198 SFTEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRP 377
Query: 739 I 737
+
Sbjct: 378 L 380
Score = 146 bits (314), Expect = 2e-034
Identities = 73/117 (62%), Positives = 79/117 (67%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 376 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 197
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV
Sbjct: 196 PRLRSGRR*FIHRSLQLFPHLGGPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV 26
>gb|BX680288.1|BX680288 BX680288 RS Pinus pinaster cDNA clone RS41E09, mRNA sequence
Length = 469
Score = 259 bits (560), Expect = 3e-068
Identities = 100/130 (76%), Positives = 113/130 (86%)
Frame = -2 / +2
Query: 1108 CCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDL 929
C + N+GAWTKEEDERL+A+I AHGEG WRSLPKAAGLLRCGKSCRLRWIN LRPDL
Sbjct: 38 CDKVHTNNKGAWTKEEDERLIAHIEAHGEGSWRSLPKAAGLLRCGKSCRLRWIN*LRPDL 217
Query: 928 KRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVT 749
KRG+F+ +EDDLI+KLHSLLGNKWSLIA RLPGRTDNEIKNYWNTH++RKLL RG+DP +
Sbjct: 218 KRGSFSEEEDDLIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHMKRKLLSRGLDPQS 397
Query: 748 HRPIAADAVT 719
HRP+ T
Sbjct: 398 HRPLGLPCKT 427
Score = 158 bits (339), Expect = 8e-038
Identities = 75/117 (64%), Positives = 82/117 (70%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS PL S+F CVFQ*F ISLSVRPG+ A+SDHL PRR SL MRSSSS+ KL
Sbjct: 405 GRWDWGSSPLLSNFLFMCVFQ*FFISLSVRPGNLPAISDHLLPRREWSLMMRSSSSSEKL 226
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
PRFRSGR * IHR+ QL PHRS PAALG +R PSP A M A LV APLL+
Sbjct: 225 PRFRSGRS*FIHRNLQLFPHRSSPAALGRERHEPSPWASMCAMRRSSSSLVQAPLLL 55
>gb|CO365658.1|CO365658 RTK1_18_A01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_A01_A029 5', mRNA sequence
Length = 812
Score = 255 bits (552), Expect = 3e-067
Identities = 95/115 (82%), Positives = 107/115 (93%)
Frame = -2 / +1
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+GAWTKEED+RL YI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG F+ D
Sbjct: 1 KGAWTKEEDDRLTQYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGGFSED 180
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRP 740
EDDLI+KLH+LLGNKWSLIA RLPGRTDNEIKNYWN+H++RKL+ G+DP+T RP
Sbjct: 181 EDDLILKLHALLGNKWSLIAGRLPGRTDNEIKNYWNSHLKRKLISMGVDPLTRRP 345
Score = 155 bits (334), Expect = 4e-037
Identities = 74/114 (64%), Positives = 80/114 (70%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR V GS P+ SF FQ*FLISLSVRPG R A+ DHLFPRR CSL +RSSSS+ K
Sbjct: 344 GRRVRGSTPMLMSFLFR*EFQ*FLISLSVRPGKRPAIRDHLFPRRACSLRIRSSSSSEKP 165
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
PRFRSGRR* IH S QL PHRSRPAALG +RQHPSP A + LV AP
Sbjct: 164 PRFRSGRR*FIHLSLQLFPHRSRPAALGRERQHPSP*A*IYWVSLSSSSLVQAP 3
>gb|CF402623.1|CF402623 RTWW1_21_B11.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_21_B11_A015 5', mRNA sequence
Length = 755
Score = 255 bits (551), Expect = 5e-067
Identities = 97/119 (81%), Positives = 111/119 (93%)
Frame = -2 / +1
Query: 1093 HTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNF 914
HTN+GA TKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYLRPDLKRG+F
Sbjct: 1 HTNKGACTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSF 180
Query: 913 TADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPI 737
T +ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GIDP +HRP+
Sbjct: 181 TEEEDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 357
Score = 147 bits (315), Expect = 2e-034
Identities = 73/117 (62%), Positives = 79/117 (67%)
Frame = +3 / -1
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 353 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 174
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLV 1091
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V APLLV
Sbjct: 173 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAPLLV 3
>gb|DR057958.1|DR057958 RTNIT1_8_G05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_8_G05_A029 5', mRNA sequence
Length = 849
Score = 252 bits (545), Expect = 3e-066
Identities = 95/116 (81%), Positives = 109/116 (93%)
Frame = -2 / +1
Query: 1084 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 905
+GAWTKEED RL+AYIRA+GEG WRSLPKAAGL RCGKSCRLRWINYLRPDLKRG+FT +
Sbjct: 1 KGAWTKEEDHRLIAYIRANGEGSWRSLPKAAGLPRCGKSCRLRWINYLRPDLKRGSFTEE 180
Query: 904 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTHRPI 737
ED+LI+KLHS++GNKWSLIA RLPGRTDNEIKNYWNTH++RKLL +GIDP +HRP+
Sbjct: 181 EDELIIKLHSVVGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLIKGIDPQSHRPL 348
Score = 141 bits (303), Expect = 7e-033
Identities = 70/114 (61%), Positives = 76/114 (66%)
Frame = +3 / -2
Query: 741 GRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKL 920
GR GS+PL S+F VFQ*F ISLSVRPG+ A+ DHL P SL M SSSS+VKL
Sbjct: 344 GRWDWGSIPLISNFLLM*VFQ*FFISLSVRPGNLPAIRDHLLPTTEWSLMMSSSSSSVKL 165
Query: 921 PRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAP 1082
PR RSGRR* IHRS QL PH PAALG +RQ PSP ARM*A V AP
Sbjct: 164 PRLRSGRR*FIHRSLQLFPHLGSPAALGRERQLPSPLARM*AMRRWSSSFVQAP 3
>gb|CV034623.1|CV034623 RTNACL1_10_A11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A11_A029 5', mRNA sequence
Length = 746
Score = 251 bits (543), Expect = 6e-066
Identities = 95/120 (79%), Positives = 109/120 (90%)
Frame = -2 / +1
Query: 1114 SPCCEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRP 935
SPCCEKAHTN+GAWT++ED RLVA+IRAHGEG WRSLPKAAGLLRCGKSCR RWINYLR
Sbjct: 1 SPCCEKAHTNKGAWTQQEDTRLVAHIRAHGEGGWRSLPKAAGLLRCGKSCRQRWINYLRQ 180
Query: 934 DLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDP 755
DLKR NF+ +ED+LI++LHSLLGNKWSLIA RL GRTDNEIKN+W+TH++RKL +G DP
Sbjct: 181 DLKRCNFSEEEDELIIRLHSLLGNKWSLIAGRLTGRTDNEIKNHWSTHIKRKLSSKGFDP 360
Score = 144 bits (309), Expect = 1e-033
Identities = 74/138 (53%), Positives = 86/138 (62%)
Frame = +3 / -1
Query: 699 WNETVVTVTASAAMGRCVTGSMPLPSSFRRTCVFQ*FLISLSVRPGSRAAMSDHLFPRRL 878
W+ + + ++S + R GS PL +F CV Q F ISLSV P + A+ DHLFPR
Sbjct: 416 WSLMISSSSSSEKLPRFRCGSNPLLDNFLLMCVLQWFFISLSVLPVNLPAIRDHLFPRSE 237
Query: 879 CSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLLPHRSRPAALGSDRQHPSPCARM*ATXXX 1058
SL + SSSS+ KL RFRS RR* IHR QL P RS PAALG +RQ PSP ARM AT
Sbjct: 236 WSLMISSSSSSEKLQRFRS*RR*FIHRCLQLFPQRSNPAALGRERQPPSPWARMWATRRV 57
Query: 1059 XXXLVHAPLLVCAFSQQG 1112
V APLLV AFSQ G
Sbjct: 56 SSCWVQAPLLV*AFSQHG 3
Score = 125 bits (268), Expect = 5e-028
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = -2 / +1
Query: 937 PDLKRGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGID 758
P LKRGNF+ +ED+LI++LHSLLGNKWSLIA RLPGR+ NEIKN+W+ H++RKL RG+
Sbjct: 358 PHLKRGNFSEEEDELIIRLHSLLGNKWSLIAGRLPGRSGNEIKNHWSIHMKRKLSRRGLH 537
Query: 757 PVTHRPIAADAVTVTTVSFQPSP 689
P THR + + T ++ P P
Sbjct: 538 PQTHRSLRPPHNSTTALNSPPGP 606
>gb|CO163969.1|CO163969 FLD1_45_A11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_A11_A029 3', mRNA sequence
Length = 888
Score = 249 bits (538), Expect(2) = 1e-065
Identities = 94/134 (70%), Positives = 116/134 (86%)
Frame = -2 / -3
Query: 1105 CEKAHTNRGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLK 926
CEK +TN+GAWT++ED RL+AYIRAHGEG W SLP+AAGLLRCGKSCRLRWINYLRP+LK
Sbjct: 835 CEKGNTNQGAWTQQEDARLIAYIRAHGEGGWHSLPRAAGLLRCGKSCRLRWINYLRPNLK 656
Query: 925 RGNFTADEDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKLLGRGIDPVTH 746
RGNF+ +EDDLI+KLH+LLG+KWSLIA RLPGRT+NEIKNYW+TH++++ L R +DP +H
Sbjct: 655 RGNFSEEEDDLIIKLHNLLGDKWSLIAGRLPGRTENEIKNYWDTHIKKRKLSRELDPQSH 476
Query: 745 RPIAADAVTVTTVS 704
R + TT+S
Sbjct: 475 RSLWLPDNGSTTLS 434
Score = 146 bits (314), Expect = 2e-034
Identities = 69/104 (66%), Positives = 74/104 (71%)
Frame = +3 / +3
Query: 795 VFQ*FLISLSVRPGSRAAMSDHLFPRRLCSLTMRSSSSAVKLPRFRSGRR*LIHRSRQLL 974
V Q*F IS SVRPG+R A+ DHL P+RL SL MRSSSS+ K PRFR GRR* IHRS QL
Sbjct: 525 VSQ*FFISFSVRPGNRPAIRDHLSPKRLWSLIMRSSSSSEKFPRFRLGRR*FIHRSLQLF 704
Query: 975 PHRSRPAALGSDRQHPSPCARM*ATXXXXXXLVHAPLLVCAFSQ 1106
PHRSRPAALG + Q PSP ARM*A VHAP V FSQ
Sbjct: 705 PHRSRPAALGRECQPPSPWARM*AMSRASSCWVHAPWFVLPFSQ 836
Score = 24.9 bits (48), Expect(2) = 1e-065
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 625 DLNLDLCISPP 593
DLNLDLC+S P
Sbjct: 298 DLNLDLCMSLP 266
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 393,353,519
Number of Sequences: 355925
Number of extensions: 4748381
Number of successful extensions: 29227
Number of sequences better than 1.0e-020: 257
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 17139750400
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)