TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576612.2.1
(845 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF399744.1|CF399744 RTDS3_25_E10.g1_A022 Drought-stresse... 316 1e-085
gb|CF472091.1|CF472091 RTDS1_8_E12.g1_A015 Drought-stressed... 316 1e-085
gb|CF478324.1|CF478324 RTWW3_18_G01.g1_A022 Well-watered lo... 316 1e-085
gb|CF671496.1|CF671496 RTCNT1_57_A12.g1_A029 Root control P... 316 1e-085
gb|CF673041.1|CF673041 RTCNT1_75_D11.g1_A029 Root control P... 316 1e-085
gb|CO170092.1|CO170092 NDL1_11_D07.g1_A029 Needles control ... 316 1e-085
gb|CO174074.1|CO174074 NDL1_41_C01.g1_A029 Needles control ... 316 1e-085
gb|CO175730.1|CO175730 NDL1_56_D03.g1_A029 Needles control ... 316 1e-085
gb|CX646426.1|CX646426 COLD1_9_F11.b1_A029 Root cold Pinus ... 316 1e-085
gb|DN634442.1|DN634442 EST985258 Subtracted pine embryo lib... 316 1e-085
gb|DR047783.1|DR047783 RTBOR1_3_B03.g1_A029 Roots plus adde... 316 1e-085
gb|DR048230.1|DR048230 RTBOR1_7_A02.g2_A029 Roots plus adde... 316 1e-085
gb|DR050741.1|DR050741 RTBOR1_25_H11.b1_A029 Roots plus add... 316 1e-085
gb|DR050828.1|DR050828 RTBOR1_25_H11.g1_A029 Roots plus add... 316 1e-085
gb|DR055195.1|DR055195 RTCA1_22_E01.b1_A029 Roots minus cal... 316 1e-085
gb|DR071357.1|DR071357 RTDK1_19_G10.b1_A029 Roots, dark Pin... 316 1e-085
gb|DR071434.1|DR071434 RTDK1_19_G10.g1_A029 Roots, dark Pin... 316 1e-085
gb|DR081816.1|DR081816 RTFEPL1_32_C02.g1_A029 Roots plus ad... 316 1e-085
gb|DR093393.1|DR093393 STRR1_8_A12.b1_A033 Stem Response Re... 316 1e-085
gb|DR093470.1|DR093470 STRR1_8_A12.g1_A033 Stem Response Re... 316 1e-085
gb|DR095952.1|DR095952 STRR1_24_F02.g1_A033 Stem Response R... 316 1e-085
gb|DR168371.1|DR168371 RTPHOS1_25_B04.b1_A029 Roots minus p... 316 1e-085
gb|CX646508.1|CX646508 COLD1_9_F11.g1_A029 Root cold Pinus ... 316 1e-085
gb|CF471295.1|CF471295 RTDS1_2_C06.g1_A015 Drought-stressed... 315 2e-085
gb|CF667615.1|CF667615 RTCNT1_31_A11.g1_A029 Root control P... 315 2e-085
gb|CO168622.1|CO168622 NDL1_1_A01.g1_A029 Needles control P... 315 2e-085
gb|CO168631.1|CO168631 NDL1_1_B01.g1_A029 Needles control P... 315 2e-085
gb|DR059173.1|DR059173 RTNIT1_16_D06.b1_A029 Roots minus ni... 315 2e-085
gb|DR742407.1|DR742407 RTCU1_3_G04.g2_A029 Roots plus added... 315 2e-085
gb|BX254513.1|BX254513 BX254513 Pinus pinaster differenciat... 314 4e-085
gb|CF391211.1|CF391211 RTDR3_4_H03.g1_A022 Loblolly pine ro... 314 4e-085
gb|CF474458.1|CF474458 RTWW2_20_E08.g1_A021 Well-watered lo... 314 4e-085
gb|CF475331.1|CF475331 RTWW2_13_A11.g1_A021 Well-watered lo... 314 4e-085
gb|CF476078.1|CF476078 RTWW2_16_A01.g1_A021 Well-watered lo... 314 4e-085
gb|DR024686.1|DR024686 STRS1_66_G03.g1_A034 Shoot tip pitch... 314 4e-085
gb|DR060513.1|DR060513 RTNIT1_28_G06.b1_A029 Roots minus ni... 314 4e-085
gb|DR054640.1|DR054640 RTCA1_18_D03.g1_A029 Roots minus cal... 314 5e-085
gb|BX249581.1|BX249581 BX249581 Pinus pinaster differenciat... 313 1e-084
gb|BX252086.1|BX252086 BX252086 Pinus pinaster differenciat... 313 1e-084
gb|BX675192.1|BX675192 BX675192 RN Pinus pinaster cDNA clon... 313 1e-084
gb|DR097160.1|DR097160 STRR1_32_H10.g1_A033 Stem Response R... 312 3e-084
gb|DT630716.1|DT630716 EST1155128 Subtracted pine embryo li... 311 4e-084
gb|BQ699594.1|BQ699594 NXRV124_C10_F NXRV (Nsf Xylem Root w... 311 5e-084
gb|CO198415.1|CO198415 GEO1_13_B09.g1_A029 Root gravitropis... 311 5e-084
gb|DR120261.1|DR120261 RTMG1_28_C05.g2_A029 Roots minus mag... 311 5e-084
gb|DN630864.1|DN630864 EST981680 Subtracted pine embryo lib... 309 1e-083
gb|DR177664.1|DR177664 RTMNUT1_6_E02.g1_A029 Roots minus mi... 309 2e-083
gb|BX680586.1|BX680586 BX680586 RS Pinus pinaster cDNA clon... 308 3e-083
gb|AW011226.1|AW011226 ST18C02 Pine TriplEx shoot tip libra... 308 5e-083
gb|DR071310.1|DR071310 RTDK1_19_C01.b1_A029 Roots, dark Pin... 307 6e-083
gb|DR096384.1|DR096384 STRR1_27_D06.g1_A033 Stem Response R... 307 6e-083
gb|AL749762.1|AL749762 AL749762 AN Pinus pinaster cDNA clon... 307 9e-083
gb|CD028439.1|CD028439 NXSI_119_A09_F NXSI (Nsf Xylem Side ... 305 2e-082
gb|DN631246.1|DN631246 EST982062 Subtracted pine embryo lib... 304 4e-082
gb|DR095762.1|DR095762 STRR1_23_A09.g1_A033 Stem Response R... 304 6e-082
gb|BF609002.1|BF609002 NXSI_039_C06_F NXSI (Nsf Xylem Side ... 301 5e-081
gb|DN634290.1|DN634290 EST985106 Subtracted pine embryo lib... 301 5e-081
gb|BQ695862.1|BQ695862 NXPV_033_E05_F NXPV (Nsf Xylem Plani... 300 7e-081
gb|AI812876.1|AI812876 22A4 Pine Lambda Zap Xylem library P... 299 2e-080
gb|CR393515.1|CR393515 CR393515 RN Pinus pinaster cDNA clon... 267 4e-080
gb|CR393636.1|CR393636 CR393636 RN Pinus pinaster cDNA clon... 293 9e-079
gb|BM133582.1|BM133582 NXLV_009_B03_F NXLV (Nsf Xylem Late ... 290 8e-078
gb|DR096305.1|DR096305 STRR1_27_D06.b1_A033 Stem Response R... 282 2e-075
gb|DR743979.1|DR743979 RTCU1_19_A08.g1_A029 Roots plus adde... 275 2e-073
gb|BF518133.1|BF518133 NXSI_035_D08_F NXSI (Nsf Xylem Side ... 275 4e-073
gb|DR054561.1|DR054561 RTCA1_18_D03.b1_A029 Roots minus cal... 269 2e-071
gb|DR093799.1|DR093799 STRR1_10_B05.g1_A033 Stem Response R... 268 3e-071
gb|AI812848.1|AI812848 20G11 Pine Lambda Zap Xylem library ... 266 2e-070
gb|CF475279.1|CF475279 RTWW2_13_A11.b1_A021 Well-watered lo... 263 1e-069
gb|AW290009.1|AW290009 NXNV009E11F Nsf Xylem Normal wood Ve... 261 5e-069
gb|CD026677.1|CD026677 NXNV009E11 Nsf Xylem Normal wood Ver... 261 5e-069
gb|AW042785.1|AW042785 ST25D05 Pine TriplEx shoot tip libra... 259 2e-068
gb|DR097085.1|DR097085 STRR1_32_H10.b1_A033 Stem Response R... 257 9e-068
gb|AW064562.1|AW064562 ST33A09 Pine TriplEx shoot tip libra... 250 1e-067
gb|BG275388.1|BG275388 NXSI_141_A06_F NXSI (Nsf Xylem Side ... 251 6e-066
gb|DN631897.1|DN631897 EST982713 Subtracted pine embryo lib... 250 1e-065
gb|DR048154.1|DR048154 RTBOR1_7_A02.b2_A029 Roots plus adde... 249 2e-065
gb|DR177584.1|DR177584 RTMNUT1_6_E02.b1_A029 Roots minus mi... 247 1e-064
gb|BE209356.1|BE209356 NXNV_166_G07_F Nsf Xylem Normal wood... 246 1e-064
gb|CO172875.1|CO172875 NDL1_32_B02.g1_A029 Needles control ... 245 4e-064
gb|BX677193.1|BX677193 BX677193 RN Pinus pinaster cDNA clon... 207 4e-063
gb|DR024860.1|DR024860 STRS1_68_B06.b1_A034 Shoot tip pitch... 241 5e-063
gb|DR071388.1|DR071388 RTDK1_19_C01.g1_A029 Roots, dark Pin... 241 6e-063
gb|CF667537.1|CF667537 RTCNT1_31_A11.b1_A029 Root control P... 237 1e-061
gb|DR100624.1|DR100624 STRR1_66_A05.b1_A033 Stem Response R... 237 1e-061
gb|CO170011.1|CO170011 NDL1_11_D07.b1_A029 Needles control ... 234 5e-061
gb|DN633035.1|DN633035 EST983851 Subtracted pine embryo lib... 234 5e-061
gb|DT630221.1|DT630221 EST1154633 Subtracted pine embryo li... 234 5e-061
gb|DR024937.1|DR024937 STRS1_68_B06.g1_A034 Shoot tip pitch... 224 6e-058
gb|BX676939.1|BX676939 BX676939 RN Pinus pinaster cDNA clon... 212 3e-054
gb|CR393446.1|CR393446 CR393446 RN Pinus pinaster cDNA clon... 212 3e-054
gb|CO172803.1|CO172803 NDL1_32_B02.b1_A029 Needles control ... 156 5e-054
gb|DR047717.1|DR047717 RTBOR1_3_B03.b1_A029 Roots plus adde... 210 1e-053
gb|BX676866.1|BX676866 BX676866 RN Pinus pinaster cDNA clon... 210 1e-053
gb|DR168441.1|DR168441 RTPHOS1_25_B04.g1_A029 Roots minus p... 208 4e-053
gb|CO167131.1|CO167131 FLD1_67_C01.b1_A029 Root flooded Pin... 208 5e-053
gb|CO167202.1|CO167202 FLD1_67_C01.g1_A029 Root flooded Pin... 208 5e-053
gb|AA556468.1|AA556468 323 Loblolly pine C Pinus taeda cDNA... 207 1e-052
gb|BF516724.1|BF516724 NXSI_002_F03_F NXSI (Nsf Xylem Side ... 201 5e-051
gb|CF472067.1|CF472067 RTDS1_8_E12.b1_A015 Drought-stressed... 199 2e-050
gb|BX252126.1|BX252126 BX252126 Pinus pinaster differenciat... 198 6e-050
gb|BQ701995.1|BQ701995 NXSI_123_B02_F NXSI (Nsf Xylem Side ... 196 1e-049
gb|AI813166.1|AI813166 23G10 Pine Lambda Zap Xylem library ... 196 2e-049
gb|CO174001.1|CO174001 NDL1_41_C01.b1_A029 Needles control ... 196 2e-049
gb|CR393732.1|CR393732 CR393732 RN Pinus pinaster cDNA clon... 195 4e-049
gb|BF609470.1|BF609470 NXSI_043_A03_F NXSI (Nsf Xylem Side ... 192 4e-048
gb|BQ699321.1|BQ699321 NXRV126_D05_F NXRV (Nsf Xylem Root w... 184 6e-046
gb|CF391176.1|CF391176 RTDR3_4_H03.b1_A022 Loblolly pine ro... 182 3e-045
gb|CF399664.1|CF399664 RTDS3_25_E10.b1_A022 Drought-stresse... 182 3e-045
gb|DR081754.1|DR081754 RTFEPL1_32_C02.b1_A029 Roots plus ad... 182 3e-045
gb|AW888060.1|AW888060 NXNV_126_G09_F Nsf Xylem Normal wood... 182 4e-045
gb|BX255269.1|BX255269 BX255269 Pinus pinaster differenciat... 170 1e-041
gb|CF474315.1|CF474315 RTWW2_20_E08.b1_A021 Well-watered lo... 158 4e-038
gb|AW783947.1|AW783947 NXNV_096_A02_F Nsf Xylem Normal wood... 156 1e-037
gb|CF671649.1|CF671649 RTCNT1_58_H11.b1_A029 Root control P... 156 2e-037
gb|AW754686.1|AW754686 PC05B07 Pine TriplEx pollen cone lib... 153 2e-036
gb|BG317627.1|BG317627 NXPV_003_H12_F NXPV (Nsf Xylem Plani... 151 7e-036
gb|AW870206.1|AW870206 NXNV_125_E08_F Nsf Xylem Normal wood... 146 2e-034
gb|BE123777.1|BE123777 NXNV_156_C03_F Nsf Xylem Normal wood... 136 2e-031
gb|DR059255.1|DR059255 RTNIT1_16_D06.g1_A029 Roots minus ni... 120 1e-026
gb|DR050985.1|DR050985 RTBOR1_27_A06.b1_A029 Roots plus add... 115 5e-025
gb|AL749551.1|AL749551 AL749551 AN Pinus pinaster cDNA clon... 108 5e-023
gb|BF778052.1|BF778052 NXSI_081_D04_F NXSI (Nsf Xylem Side ... 108 6e-023
gb|DR080737.1|DR080737 RTFEPL1_24_G10.g1_A029 Roots plus ad... 108 6e-023
gb|BE452105.1|BE452105 NXCI_009_G04_F NXCI (Nsf Xylem Compr... 107 9e-023
>gb|CF399744.1|CF399744 RTDS3_25_E10.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_25_E10_A022 5', mRNA sequence
Length = 654
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 35 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 214
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 215 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 394
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 395 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 526
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 525 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 346
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 345 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 166
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 165 KRASRSTPL*ENFLNVLF 112
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 520 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 341
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 340 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 161
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 160 GVQINTPVGELLERSLLRLHWPDIHIRV 77
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 283 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 462
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 463 S*AWETWYWCYTLL*VYSSEV 525
>gb|CF472091.1|CF472091 RTDS1_8_E12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_8_E12_A015 5', mRNA sequence
Length = 746
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 19 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 198
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 199 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 378
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 379 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 510
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 509 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 330
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 329 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 150
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 149 KRASRSTPL*ENFLNVLF 96
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 504 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 325
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 324 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 145
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 144 GVQINTPVGELLERSLLRLHWPDIHIRV 61
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 267 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 446
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 447 S*AWETWYWCYTLL*VYSSEV 509
>gb|CF478324.1|CF478324 RTWW3_18_G01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_18_G01_A022 5', mRNA sequence
Length = 736
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 26 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 205
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 206 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 385
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 386 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 517
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 516 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 337
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 336 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 157
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 156 KRASRSTPL*ENFLNVLF 103
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 511 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 332
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 331 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 152
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 151 GVQINTPVGELLERSLLRLHWPDIHIRV 68
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 274 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 453
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 454 S*AWETWYWCYTLL*VYSSEV 516
>gb|CF671496.1|CF671496 RTCNT1_57_A12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_A12_A029 5', mRNA sequence
Length = 690
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 56 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 235
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 236 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 415
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 416 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 547
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 546 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 367
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 366 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 187
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 186 KRASRSTPL*ENFLNVLF 133
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 541 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 362
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 361 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 182
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 181 GVQINTPVGELLERSLLRLHWPDIHIRV 98
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 304 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 483
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 484 S*AWETWYWCYTLL*VYSSEV 546
>gb|CF673041.1|CF673041 RTCNT1_75_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_D11_A029 5', mRNA sequence
Length = 789
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 41 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 220
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 221 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 400
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 401 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 532
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 531 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 352
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 351 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 172
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 171 KRASRSTPL*ENFLNVLF 118
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 526 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 347
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 346 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 167
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 166 GVQINTPVGELLERSLLRLHWPDIHIRV 83
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 289 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 468
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 469 S*AWETWYWCYTLL*VYSSEV 531
>gb|CO170092.1|CO170092 NDL1_11_D07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_D07_A029 5', mRNA sequence
Length = 786
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 24 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 203
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 204 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 383
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 384 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 515
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 514 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 335
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 334 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 155
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 154 KRASRSTPL*ENFLNVLF 101
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 509 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 330
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 329 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 150
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 149 GVQINTPVGELLERSLLRLHWPDIHIRV 66
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 272 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 451
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 452 S*AWETWYWCYTLL*VYSSEV 514
>gb|CO174074.1|CO174074 NDL1_41_C01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_41_C01_A029 5', mRNA sequence
Length = 708
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 4 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 183
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 184 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 363
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 364 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 495
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 494 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 315
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 314 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 135
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 134 KRASRSTPL*ENFLNVLF 81
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 489 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 310
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 309 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 130
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 129 GVQINTPVGELLERSLLRLHWPDIHIRV 46
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 252 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 431
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 432 S*AWETWYWCYTLL*VYSSEV 494
>gb|CO175730.1|CO175730 NDL1_56_D03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_56_D03_A029 5', mRNA sequence
Length = 776
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 69 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 248
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 249 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 428
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 429 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 560
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 559 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 380
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 379 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 200
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 199 KRASRSTPL*ENFLNVLF 146
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 554 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 375
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 374 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 195
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 194 GVQINTPVGELLERSLLRLHWPDIHIRV 111
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 317 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 496
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 497 S*AWETWYWCYTLL*VYSSEV 559
>gb|CX646426.1|CX646426 COLD1_9_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_F11_A029 3', mRNA sequence
Length = 811
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 16 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 195
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 196 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 375
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 376 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 507
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 506 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 327
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 326 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 147
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 146 KRASRSTPL*ENFLNVLF 93
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 501 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 322
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 321 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 142
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 141 GVQINTPVGELLERSLLRLHWPDIHIRV 58
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 264 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 443
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 444 S*AWETWYWCYTLL*VYSSEV 506
>gb|DN634442.1|DN634442 EST985258 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADM60, mRNA sequence
Length = 791
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 80 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 259
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 260 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 439
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 440 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 571
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 570 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 391
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 390 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 211
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 210 KRASRSTPL*ENFLNVLF 157
Score = 184 bits (397), Expect = 6e-046
Identities = 78/148 (52%), Positives = 102/148 (68%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ + N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 565 QRNKPRGVCSTNTRSPMLNWFIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 386
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 385 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 206
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 205 GVQINTPVGELLERSLLRLHWPDIHIRV 122
Score = 124 bits (266), Expect = 7e-028
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+
Sbjct: 328 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*T 507
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 508 S*AWETWYWCYTLL*VYSSEV 570
>gb|DR047783.1|DR047783 RTBOR1_3_B03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_3_B03_A029 5', mRNA sequence
Length = 573
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 63 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 242
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 243 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 422
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 423 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 554
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 553 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 374
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 373 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 194
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 193 KRASRSTPL*ENFLNVLF 140
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 548 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 369
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 368 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 189
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 188 GVQINTPVGELLERSLLRLHWPDIHIRV 105
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 311 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 490
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 491 S*AWETWYWCYTLL*VYSSEV 553
>gb|DR048230.1|DR048230 RTBOR1_7_A02.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_A02_A029 5', mRNA sequence
Length = 822
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 48 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 227
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 228 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 407
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 408 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 539
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 538 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 359
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 358 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 179
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 178 KRASRSTPL*ENFLNVLF 125
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 533 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 354
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 353 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 174
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 173 GVQINTPVGELLERSLLRLHWPDIHIRV 90
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 296 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 475
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 476 S*AWETWYWCYTLL*VYSSEV 538
>gb|DR050741.1|DR050741 RTBOR1_25_H11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H11_A029 3', mRNA sequence
Length = 900
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / -3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 853 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 674
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 673 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 494
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 493 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 362
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / +3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 363 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 542
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 543 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 722
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 723 KRASRSTPL*ENFLNVLF 776
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / +2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 368 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 547
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 548 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 727
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 728 GVQINTPVGELLERSLLRLHWPDIHIRV 811
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / -2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 605 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 426
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 425 S*AWETWYWCYTLL*VYSSEV 363
>gb|DR050828.1|DR050828 RTBOR1_25_H11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H11_A029 5', mRNA sequence
Length = 904
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / -3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 887 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 708
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 707 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 528
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 527 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 396
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 397 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 576
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 577 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 756
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 757 KRASRSTPL*ENFLNVLF 810
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / +3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 402 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 581
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 582 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 761
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 762 GVQINTPVGELLERSLLRLHWPDIHIRV 845
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / -2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 639 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 460
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 459 S*AWETWYWCYTLL*VYSSEV 397
>gb|DR055195.1|DR055195 RTCA1_22_E01.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_22_E01_A029 3', mRNA sequence
Length = 749
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / -3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 702 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 523
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 522 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 343
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 342 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 211
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / +2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 212 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 391
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 392 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 571
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 572 KRASRSTPL*ENFLNVLF 625
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / +1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 217 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 396
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 397 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 576
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 577 GVQINTPVGELLERSLLRLHWPDIHIRV 660
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / -2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 454 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 275
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 274 S*AWETWYWCYTLL*VYSSEV 212
>gb|DR071357.1|DR071357 RTDK1_19_G10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G10_A029 3', mRNA sequence
Length = 772
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 45 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 224
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 225 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 404
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 405 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 536
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 535 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 356
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 355 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 176
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 175 KRASRSTPL*ENFLNVLF 122
Score = 184 bits (397), Expect = 6e-046
Identities = 78/148 (52%), Positives = 102/148 (68%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 530 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 351
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 350 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 171
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER L D+ + +
Sbjct: 170 GVQINTPVGELLERSFLRLHWPDIHIRV 87
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 293 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 472
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 473 S*AWETWYWCYTLL*VYSSEV 535
>gb|DR071434.1|DR071434 RTDK1_19_G10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G10_A029 5', mRNA sequence
Length = 656
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 28 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 207
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 208 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 387
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 388 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 519
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 518 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 339
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 338 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 159
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 158 KRASRSTPL*ENFLNVLF 105
Score = 184 bits (397), Expect = 6e-046
Identities = 78/148 (52%), Positives = 102/148 (68%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 513 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 334
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 333 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 154
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER L D+ + +
Sbjct: 153 GVQINTPVGELLERSFLRLHWPDIHIRV 70
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 276 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 455
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 456 S*AWETWYWCYTLL*VYSSEV 518
>gb|DR081816.1|DR081816 RTFEPL1_32_C02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_C02_A029 5', mRNA sequence
Length = 579
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 36 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 215
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 216 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 395
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 396 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 527
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 526 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 347
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 346 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 167
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 166 KRASRSTPL*ENFLNVLF 113
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 521 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 342
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 341 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 162
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 161 GVQINTPVGELLERSLLRLHWPDIHIRV 78
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 284 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 463
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 464 S*AWETWYWCYTLL*VYSSEV 526
>gb|DR093393.1|DR093393 STRR1_8_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A12_A033 3', mRNA sequence
Length = 893
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 2 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 181
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 182 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 361
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 362 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 493
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 492 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 313
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 312 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 133
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 132 KRASRSTPL*ENFLNVLF 79
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 487 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 308
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 307 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 128
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 127 GVQINTPVGELLERSLLRLHWPDIHIRV 44
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 250 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 429
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 430 S*AWETWYWCYTLL*VYSSEV 492
>gb|DR093470.1|DR093470 STRR1_8_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A12_A033 5', mRNA sequence
Length = 877
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 35 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 214
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 215 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 394
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 395 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 526
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 525 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 346
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 345 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 166
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 165 KRASRSTPL*ENFLNVLF 112
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 520 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 341
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 340 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 161
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 160 GVQINTPVGELLERSLLRLHWPDIHIRV 77
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 283 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 462
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 463 S*AWETWYWCYTLL*VYSSEV 525
>gb|DR095952.1|DR095952 STRR1_24_F02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_24_F02_A033 5', mRNA sequence
Length = 727
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 15 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 194
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 195 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 374
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 375 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 506
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 505 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 326
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 325 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 146
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 145 KRASRSTPL*ENFLNVLF 92
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 500 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 321
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 320 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 141
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 140 GVQINTPVGELLERSLLRLHWPDIHIRV 57
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 263 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 442
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 443 S*AWETWYWCYTLL*VYSSEV 505
>gb|DR168371.1|DR168371 RTPHOS1_25_B04.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_B04_A029 3', mRNA sequence
Length = 658
Score = 316 bits (685), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / -1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 619 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 440
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 439 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 260
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 259 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 128
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / +3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 129 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 308
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 309 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 488
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 489 KRASRSTPL*ENFLNVLF 542
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / +2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 134 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 313
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 314 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 493
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 494 GVQINTPVGELLERSLLRLHWPDIHIRV 577
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / -3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 371 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 192
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 191 S*AWETWYWCYTLL*VYSSEV 129
>gb|CX646508.1|CX646508 COLD1_9_F11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_F11_A029 5', mRNA sequence
Length = 869
Score = 316 bits (684), Expect = 1e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 75 RAELSSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 254
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 255 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 434
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 435 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 566
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 565 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 386
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 385 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 206
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 205 KRASRSTPL*ENFLNVLF 152
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 560 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 381
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 380 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 201
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 200 GVQINTPVGELLERSLLRLHWPDIHIRV 117
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 323 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 502
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 503 S*AWETWYWCYTLL*VYSSEV 565
>gb|CF471295.1|CF471295 RTDS1_2_C06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_C06_A015 5', mRNA sequence
Length = 736
Score = 315 bits (683), Expect = 2e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 33 RAEASSVDSVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 212
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 213 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 392
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 393 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 524
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 523 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 344
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 343 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 164
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 163 KRASRSTPL*ENFLNVLF 110
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 518 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 339
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 338 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 159
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 158 GVQINTPVGELLERSLLRLHWTDIHIRV 75
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 281 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 460
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 461 S*AWETWYWCYTLL*VYSSEV 523
>gb|CF667615.1|CF667615 RTCNT1_31_A11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_31_A11_A029 5', mRNA sequence
Length = 743
Score = 315 bits (683), Expect = 2e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 53 RAEASSVDSVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 232
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 233 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 412
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 413 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 544
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 543 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 364
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 363 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 184
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 183 KRASRSTPL*ENFLNVLF 130
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 538 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 359
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 358 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 179
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 178 GVQINTPVGELLERSLLRLHWTDIHIRV 95
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 301 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 480
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 481 S*AWETWYWCYTLL*VYSSEV 543
>gb|CO168622.1|CO168622 NDL1_1_A01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_A01_A029 5', mRNA sequence
Length = 714
Score = 315 bits (683), Expect = 2e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 30 RAEASSVDSVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 209
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 210 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 389
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 390 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 521
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 520 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 341
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 340 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 161
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 160 KRASRSTPL*ENFLNVLF 107
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 515 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 336
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 335 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 156
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 155 GVQINTPVGELLERSLLRLHWTDIHIRV 72
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 278 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 457
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 458 S*AWETWYWCYTLL*VYSSEV 520
>gb|CO168631.1|CO168631 NDL1_1_B01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_B01_A029 5', mRNA sequence
Length = 586
Score = 315 bits (683), Expect = 2e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 32 RAEASSVDSVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 211
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 212 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 391
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 392 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 523
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 522 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 343
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 342 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 163
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 162 KRASRSTPL*ENFLNVLF 109
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 517 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 338
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 337 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 158
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 157 GVQINTPVGELLERSLLRLHWTDIHIRV 74
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 280 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 459
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 460 S*AWETWYWCYTLL*VYSSEV 522
>gb|DR059173.1|DR059173 RTNIT1_16_D06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_D06_A029 3', mRNA sequence
Length = 551
Score = 315 bits (683), Expect = 2e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / -1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 527 RAEASSVDSVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 348
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 347 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 168
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 167 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 36
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 37 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 216
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 217 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 396
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 397 KRASRSTPL*ENFLNVLF 450
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / +3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 42 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 221
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 222 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 401
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 402 GVQINTPVGELLERSLLRLHWTDIHIRV 485
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / -3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 279 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 100
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 99 S*AWETWYWCYTLL*VYSSEV 37
>gb|DR742407.1|DR742407 RTCU1_3_G04.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_3_G04_A029 5', mRNA sequence
Length = 747
Score = 315 bits (683), Expect = 2e-085
Identities = 131/164 (79%), Positives = 149/164 (90%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 26 RAEASSVDSVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 205
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 206 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 385
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 386 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 517
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 516 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 337
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 336 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 157
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 156 KRASRSTPL*ENFLNVLF 103
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 511 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 332
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 331 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 152
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 151 GVQINTPVGELLERSLLRLHWTDIHIRV 68
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 274 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 453
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 454 S*AWETWYWCYTLL*VYSSEV 516
>gb|BX254513.1|BX254513 BX254513 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP099E08 similar to 40S RIBOSOMAL PROTEIN
S15, mRNA sequence
Length = 707
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 84 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 263
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 264 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 443
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 444 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 533
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -2
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 535 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 356
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 355 GTIIMLRR*VRTGSGFSPDGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 176
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 175 SRRASRSTPRYENFLNVLLL 116
Score = 160 bits (345), Expect = 9e-039
Identities = 66/148 (44%), Positives = 98/148 (66%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 527 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 348
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W L RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 347 NHVAKVSSYRFWFLTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 168
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IE+D AV L +RP G GG + +++
Sbjct: 167 SIEIDPAVRKLLKRPPFGLGGGHISIYV 84
Score = 105 bits (224), Expect(2) = 5e-023
Identities = 39/75 (52%), Positives = 53/75 (70%)
Frame = +2 / +2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
E R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 308 ETRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 487
Query: 584 RYWCHSLLAVYPSEM 628
YWC+SL V+ SE+
Sbjct: 488 WYWCYSLFQVHSSEV 532
Score = 22.6 bits (43), Expect(2) = 5e-023
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2 / +2
Query: 209 SQEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEKVP 328
+Q+EDV +V + C++ H R PS KVP
Sbjct: 113 AQKEDV*EVFVPRGRSRCSSGHDLR*YLQTFPSPCSSKVP 232
>gb|CF391211.1|CF391211 RTDR3_4_H03.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_4_H03_A022 5', mRNA
sequence
Length = 698
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 101 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 280
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 281 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 460
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 461 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 550
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -3
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 552 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 373
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 372 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 193
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 192 SRRASRSTPRYENFLNVLLL 133
Score = 159 bits (342), Expect = 2e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 544 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 365
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 364 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 185
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 184 SIEVDPAVRKLLKRPPFGLGGGHISIYV 101
Score = 107 bits (228), Expect(2) = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 325 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 504
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 505 WYWCYSLFQVHSSEVGLWP 561
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2 / +1
Query: 209 SQEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEKVP 328
+Q+EDV +V + C++ H R PS KVP
Sbjct: 130 AQKEDV*EVFVPRGRPRCSSGHDLR*YLQTFPSPCSSKVP 249
>gb|CF474458.1|CF474458 RTWW2_20_E08.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_20_E08_A021 5', mRNA sequence
Length = 768
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 60 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 239
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 240 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 419
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 420 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 509
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -3
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 511 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 332
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 331 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 152
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 151 SRRASRSTPRYENFLNVLLL 92
Score = 159 bits (342), Expect = 2e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 503 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 324
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 323 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 144
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 143 SIEVDPAVRKLLKRPPFGLGGGHISIYV 60
Score = 107 bits (228), Expect = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / +2
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 284 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 463
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 464 WYWCYSLFQVHSSEVGLWP 520
>gb|CF475331.1|CF475331 RTWW2_13_A11.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_13_A11_A021 5', mRNA sequence
Length = 696
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 29 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 208
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 209 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 388
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 389 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 478
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -1
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 480 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 301
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 300 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 121
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 120 SRRASRSTPRYENFLNVLLL 61
Score = 159 bits (342), Expect = 2e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 472 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 293
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 292 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 113
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 112 SIEVDPAVRKLLKRPPFGLGGGHISIYV 29
Score = 107 bits (228), Expect(2) = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 253 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 432
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 433 WYWCYSLFQVHSSEVGLWP 489
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2 / +1
Query: 209 SQEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEKVP 328
+Q+EDV +V + C++ H R PS KVP
Sbjct: 58 AQKEDV*EVFVPRGRPRCSSGHDLR*YLQTFPSPCSSKVP 177
>gb|CF476078.1|CF476078 RTWW2_16_A01.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_16_A01_A021 5', mRNA sequence
Length = 587
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 26 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 205
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 206 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 385
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 386 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 475
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -3
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 477 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 298
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 297 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 118
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 117 SRRASRSTPRYENFLNVLLL 58
Score = 159 bits (342), Expect = 2e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 469 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 290
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 289 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 110
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 109 SIEVDPAVRKLLKRPPFGLGGGHISIYV 26
Score = 107 bits (228), Expect(2) = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 250 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 429
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 430 WYWCYSLFQVHSSEVGLWP 486
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2 / +1
Query: 209 SQEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEKVP 328
+Q+EDV +V + C++ H R PS KVP
Sbjct: 55 AQKEDV*EVFVPRGRPRCSSGHDLR*YLQTFPSPCSSKVP 174
>gb|DR024686.1|DR024686 STRS1_66_G03.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_66_G03_A034 5', mRNA sequence
Length = 655
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / +2
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 44 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 223
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 224 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 403
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 404 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 493
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -2
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 495 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 316
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 315 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 136
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 135 SRRASRSTPRYENFLNVLLL 76
Score = 159 bits (342), Expect = 2e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 487 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 308
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 307 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 128
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 127 SIEVDPAVRKLLKRPPFGLGGGHISIYV 44
Score = 107 bits (228), Expect(2) = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / +1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 268 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 447
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 448 WYWCYSLFQVHSSEVGLWP 504
Score = 21.7 bits (41), Expect(2) = 1e-022
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2 / +1
Query: 209 SQEEDVPQVQLXXXXXXCAA*HVHRRPRPALPSARQEKVP 328
+Q+EDV +V + C++ H R PS KVP
Sbjct: 73 AQKEDV*EVFVPRGRPRCSSGHDLR*YLQTFPSPCSSKVP 192
>gb|DR060513.1|DR060513 RTNIT1_28_G06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_28_G06_A029 3', mRNA sequence
Length = 747
Score = 314 bits (681), Expect = 4e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = +3 / -2
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A PK+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 629 DVDGDVTAAQPKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 450
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 449 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 270
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 269 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 180
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / +1
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 178 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 357
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 358 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 537
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 538 SRRASRSTPRYENFLNVLLL 597
Score = 159 bits (342), Expect = 2e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / +3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 186 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 365
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 366 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 545
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 546 SIEVDPAVRKLLKRPPFGLGGGHISIYV 629
Score = 107 bits (228), Expect = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / -1
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 405 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 226
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 225 WYWCYSLFQVHSSEVGLWP 169
>gb|DR054640.1|DR054640 RTCA1_18_D03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_D03_A029 5', mRNA sequence
Length = 746
Score = 314 bits (680), Expect = 5e-085
Identities = 130/164 (79%), Positives = 148/164 (90%)
Frame = +3 / +1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 19 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 198
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 199 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 378
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEM GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 379 NQVEIKPEMTGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 510
Score = 207 bits (446), Expect = 1e-052
Identities = 98/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WP+ISGLIST L V PL*TP MLPIISG
Sbjct: 509 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPVISGLIST*LNVFPL*TPIMLPIISG 330
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 329 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 150
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 149 KRASRSTPL*ENFLNVLF 96
Score = 184 bits (396), Expect = 8e-046
Identities = 78/148 (52%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+A+HLRLD NL+E L IV+TNNA NHL +N
Sbjct: 504 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMASHLRLDFNLIECLPIVNTNNATNHLRNN 325
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 324 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 145
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 144 GVQINTPVGELLERSLLRLHWPDIHIRV 61
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 267 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 446
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 447 S*AWETWYWCYTLL*VYSSEV 509
>gb|BX249581.1|BX249581 BX249581 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP025G09 similar to 40S RIBOSOMAL PROTEIN
S15, mRNA sequence
Length = 669
Score = 313 bits (677), Expect = 1e-084
Identities = 131/164 (79%), Positives = 147/164 (89%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 56 RAEASSVDSVAAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 235
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK+ AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 236 RRFQRGLKRQPMALVKKLRKAKRLAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 415
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 416 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 547
Score = 206 bits (444), Expect = 2e-052
Identities = 98/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 546 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 367
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GA+ FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 366 TIIMLRRWVLTGSGFSPAGANRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 187
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 186 KRASRSTPL*ENFLNVLF 133
Score = 182 bits (391), Expect = 4e-045
Identities = 78/148 (52%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 541 QRNKPRGVRSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 362
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV E+G +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 361 YHVTEVGSNWLWFLTCRS*PFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELF*GHVQK 182
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 181 GVQINTPVGELLERSLLRLHWTDIHIRV 98
Score = 122 bits (260), Expect(2) = 2e-027
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +2 / +1
Query: 392 SCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQ 571
SCR E RAS +P P HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 310 SCR*ETRAS*NPPP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*AS* 489
Query: 572 AREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 490 AWETWYWCYALL*VYSSEV 546
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +3
Query: 160 LQTWRTSMW 186
LQ WRT MW
Sbjct: 84 LQPWRTRMW 110
>gb|BX252086.1|BX252086 BX252086 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP059E06 similar to 40S RIBOSOMAL PROTEIN
S15, mRNA sequence
Length = 702
Score = 313 bits (677), Expect = 1e-084
Identities = 131/164 (79%), Positives = 147/164 (89%)
Frame = +3 / +2
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 32 RAEASSVDSVAAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 211
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK+ AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 212 RRFQRGLKRQPMALVKKLRKAKRLAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 391
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 392 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 523
Score = 206 bits (444), Expect = 2e-052
Identities = 98/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 522 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 343
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GA+ FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 342 TIIMLRRWVLTGSGFSPAGANRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 163
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 162 KRASRSTPL*ENFLNVLF 109
Score = 182 bits (391), Expect = 4e-045
Identities = 78/148 (52%), Positives = 103/148 (69%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 517 QRNKPRGVRSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 338
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV E+G +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 337 YHVTEVGSNWLWFLTCRS*PFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELF*GHVQK 158
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 157 GVQINTPVGELLERSLLRLHWTDIHIRV 74
Score = 122 bits (260), Expect(2) = 2e-027
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +2 / +1
Query: 392 SCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQ 571
SCR E RAS +P P HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 286 SCR*ETRAS*NPPP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*AS* 465
Query: 572 AREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 466 AWETWYWCYALL*VYSSEV 522
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +3
Query: 160 LQTWRTSMW 186
LQ WRT MW
Sbjct: 60 LQPWRTRMW 86
>gb|BX675192.1|BX675192 BX675192 RN Pinus pinaster cDNA clone RN10H02, mRNA sequence
Length = 613
Score = 313 bits (677), Expect = 1e-084
Identities = 131/164 (79%), Positives = 147/164 (89%)
Frame = +3 / +1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 64 RAEASSVDSVAAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 243
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK+ AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTF
Sbjct: 244 RRFQRGLKRQPMALVKKLRKAKRLAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 423
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 424 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 555
Score = 206 bits (444), Expect = 2e-052
Identities = 98/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 554 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 375
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GA+ FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 374 TIIMLRRWVLTGSGFSPAGANRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 195
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 194 KRASRSTPL*ENFLNVLF 141
Score = 182 bits (391), Expect = 4e-045
Identities = 78/148 (52%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 549 QRNKPRGVRSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 370
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV E+G +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 369 YHVTEVGSNWLWFLTCRS*PFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELF*GHVQK 190
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 189 GVQINTPVGELLERSLLRLHWTDIHIRV 106
Score = 122 bits (260), Expect(2) = 2e-027
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +2 / +3
Query: 392 SCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQ 571
SCR E RAS +P P HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 318 SCR*ETRAS*NPPP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*AS* 497
Query: 572 AREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 498 AWETWYWCYALL*VYSSEV 554
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +2
Query: 160 LQTWRTSMW 186
LQ WRT MW
Sbjct: 92 LQPWRTRMW 118
>gb|DR097160.1|DR097160 STRR1_32_H10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_H10_A033 5', mRNA sequence
Length = 678
Score = 312 bits (675), Expect = 3e-084
Identities = 129/156 (82%), Positives = 145/156 (92%)
Frame = +3 / +3
Query: 162 SNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLK 341
S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLK
Sbjct: 12 SVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLK 191
Query: 342 RKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPE 521
R+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPE
Sbjct: 192 RQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 371
Query: 522 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 372 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 479
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 478 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 299
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 298 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 119
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 118 KRASRSTPL*ENFLNVLF 65
Score = 186 bits (401), Expect = 2e-046
Identities = 79/148 (53%), Positives = 103/148 (69%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 473 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 294
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 293 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 114
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 113 GVQINTPVGELLERSLLRLHWPDIHIRV 30
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 236 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 415
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 416 S*AWETWYWCYTLL*VYSSEV 478
>gb|DT630716.1|DT630716 EST1155128 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIMEC17, mRNA sequence
Length = 785
Score = 311 bits (674), Expect = 4e-084
Identities = 129/164 (78%), Positives = 147/164 (89%)
Frame = +3 / -1
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 761 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 582
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGK F
Sbjct: 581 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKAF 402
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEF ISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 401 NQVEIKPEMIGHYLAEFFISYKPVKHGRPGIGATHSSRFIPLK* 270
Score = 202 bits (436), Expect = 2e-051
Identities = 96/138 (69%), Positives = 102/138 (73%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+F+GIN EE VAPIPGLPCLTGL E++NSAR*WPIISGLIST L PL*TP MLPIISG
Sbjct: 271 YFKGINLEECVAPIPGLPCLTGLYEIKNSAR*WPIISGLIST*LNAFPL*TPIMLPIISG 450
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 451 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 630
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 631 KRASRSTPL*ENFLNVLF 684
Score = 184 bits (397), Expect = 6e-046
Identities = 78/148 (52%), Positives = 102/148 (68%)
Frame = -1 / +3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ + N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 276 QRNKPRGVCSTNTRSPMLNWFIRNKKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 455
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 456 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 635
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 636 GVQINTPVGELLERSLLRLHWPDIHIRV 719
Score = 118 bits (253), Expect = 4e-026
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = +2 / -3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+ +Q G*+QA*DDWPLS RV +F+
Sbjct: 513 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEGIQSG*NQA*DDWPLSGRVFYFV*T 334
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY E+
Sbjct: 333 S*AWETWYWCYTLL*VYSFEV 271
>gb|BQ699594.1|BQ699594 NXRV124_C10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV124_C10 5' similar to Arabidopsis thaliana
sequence At5g09510 ribosomal protein S15-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 701
Score = 311 bits (673), Expect = 5e-084
Identities = 128/150 (85%), Positives = 141/150 (94%)
Frame = +3 / +1
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
DV+ +V A K+RTF+K+SYRGVDLDALLDM++DD+ +LFPARARRRF RGLKR+PMAL
Sbjct: 49 DVDGDVTAAXXKRRTFKKFSYRGVDLDALLDMTSDDICKLFPARARRRFHRGLKRQPMAL 228
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
IKKLRKAK +AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 229 IKKLRKAKLEAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 408
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
AEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 409 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 498
Score = 194 bits (419), Expect = 5e-049
Identities = 94/140 (67%), Positives = 102/140 (72%)
Frame = -2 / -1
Query: 631 THFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIIS 452
++FRG+N EE*VAPIPGLPC TGL E+ENSA+* PIISGLIST LKV PL*TP MLPIIS
Sbjct: 500 SYFRGMNLEE*VAPIPGLPCFTGLYEIENSAK*CPIISGLIST*LKVFPL*TPMMLPIIS 321
Query: 451 GTMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXX 272
GT+IMLRR V TGSGFSP GAS FA RSFL+ A+G LF P WNL ARAGKS
Sbjct: 320 GTIIMLRR*VRTGSGFSPEGASSFAFRSFLIKAIGCLFSPRWNLRRARAGKSLQISSEVM 141
Query: 271 XXXXXXSTPR*LYLRNVLFL 212
STPR NVL L
Sbjct: 140 SRRASRSTPRYENFLNVLLL 81
Score = 160 bits (344), Expect = 1e-038
Identities = 66/148 (44%), Positives = 97/148 (65%)
Frame = -1 / -3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR++P VS TNT P + RLV N + C +++NHLRLD NL++GL+IV+TN+A NH +N
Sbjct: 492 QRNEPGRVSSTNTRPSMFYRLVRN*KFC*VMSNHLRLDFNLIKGLSIVNTNDASNHFWNN 313
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
+HVA++ + W RS R ++LLD+ H L LQ +EPS WE+ ++ GHV++
Sbjct: 312 NHVAKVSSYRFWFFTRRSF*LRFSKLLDQSHRLSLQPSMEPSTSTGWEKFANII*GHVQK 133
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
IEVD AV L +RP G GG + +++
Sbjct: 132 SIEVDPAVRKLLKRPPFGXGGGHISIYV 49
Score = 107 bits (228), Expect = 1e-022
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +2 / +3
Query: 404 EARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQAREA 583
+ R + QHD+C R+DW+H WCLQW+DL G*+QA*DDW L R+ +F+QA + +A
Sbjct: 273 KTRTCTNSPSQHDYCSRNDWKHHWCLQWKDL*SG*NQA*DDWTLLSRIFNFVQACKTWKA 452
Query: 584 RYWCHSLLAVYPSEMSCYP 640
YWC+SL V+ SE+ +P
Sbjct: 453 WYWCYSLFQVHSSEVGLWP 509
>gb|CO198415.1|CO198415 GEO1_13_B09.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_13_B09_A029 5', mRNA sequence
Length = 690
Score = 311 bits (673), Expect = 5e-084
Identities = 128/154 (83%), Positives = 144/154 (93%)
Frame = +3 / +1
Query: 168 MADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRK 347
+A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLKR+
Sbjct: 1 LAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQ 180
Query: 348 PMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMI 527
PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMI
Sbjct: 181 PMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMI 360
Query: 528 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 361 GHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 462
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 461 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 282
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 281 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 102
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 101 KRASRSTPL*ENFLNVLF 48
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 456 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 277
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 276 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 97
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 96 GVQINTPVGELLERSLLRLHWTDIHIRV 13
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +3
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 219 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 398
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 399 S*AWETWYWCYTLL*VYSSEV 461
>gb|DR120261.1|DR120261 RTMG1_28_C05.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_C05_A029 5', mRNA sequence
Length = 530
Score = 311 bits (673), Expect = 5e-084
Identities = 129/156 (82%), Positives = 145/156 (92%)
Frame = +3 / +3
Query: 162 SNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLK 341
S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLK
Sbjct: 9 SVVAMADPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLK 188
Query: 342 RKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPE 521
R+PMAL+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPE
Sbjct: 189 RQPMALVKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 368
Query: 522 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 369 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 476
Score = 200 bits (432), Expect = 9e-051
Identities = 98/138 (71%), Positives = 102/138 (73%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 475 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 296
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 295 TIIMLRR*VLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 116
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 115 KRASRSTPL*ENFLNVLF 62
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 470 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 291
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 290 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 111
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 110 GVQINTPVGELLERSLLRLHWTDIHIRV 27
Score = 117 bits (250), Expect = 1e-025
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 233 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 412
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 413 S*AWETWYWCYTLL*VYSSEV 475
>gb|DN630864.1|DN630864 EST981680 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC082, mRNA sequence
Length = 793
Score = 309 bits (670), Expect = 1e-083
Identities = 128/164 (78%), Positives = 146/164 (89%)
Frame = +3 / -3
Query: 138 RPQCSDLTSNMADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARAR 317
R + S + S +A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARAR
Sbjct: 761 RAEASSVDSVVAMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARAR 582
Query: 318 RRFQRGLKRKPMALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTF 497
RRFQRGLKR+PMAL+KKLRKAK++AP GEKPEPV+TH RNMIIVPEMIGSI+GVYNGK F
Sbjct: 581 RRFQRGLKRQPMALVKKLRKAKREAPAGEKPEPVRTHFRNMIIVPEMIGSIIGVYNGKAF 402
Query: 498 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
NQVEIKPEMIGHYLAEF ISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 401 NQVEIKPEMIGHYLAEFFISYKPVKHGRPGIGATHSSRFIPLK* 270
Score = 201 bits (433), Expect = 6e-051
Identities = 95/138 (68%), Positives = 102/138 (73%)
Frame = -2 / +1
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+F+GIN EE VAPIPGLPCLTGL E++NSAR*WPIISGLIST L PL*TP MLPIISG
Sbjct: 271 YFKGINLEECVAPIPGLPCLTGLYEIKNSAR*WPIISGLIST*LNAFPL*TPIMLPIISG 450
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLR+WV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 451 TIIMLRKWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 630
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 631 KRASRSTPL*ENFLNVLF 684
Score = 184 bits (397), Expect = 6e-046
Identities = 78/148 (52%), Positives = 102/148 (68%)
Frame = -1 / +3
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ + N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 276 QRNKPRGVCSTNTRSPMLNWFIRNKKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 455
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 456 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 635
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 636 GVQINTPVGELLERSLLRLHWPDIHIRV 719
Score = 116 bits (247), Expect = 3e-025
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = +2 / -2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +P P HD+C DDW H WCLQW+ +Q G*+QA*DDWPLS RV +F+
Sbjct: 513 GSSCR*ETRAS*NPFP*HDNCS*DDW*HYWCLQWEGIQSG*NQA*DDWPLSGRVFYFV*T 334
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY E+
Sbjct: 333 S*AWETWYWCYTLL*VYSFEV 271
>gb|DR177664.1|DR177664 RTMNUT1_6_E02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E02_A029 5', mRNA sequence
Length = 735
Score = 309 bits (669), Expect = 2e-083
Identities = 126/149 (84%), Positives = 141/149 (94%)
Frame = +3 / +3
Query: 180 DVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMAL 359
D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLKR+PMAL
Sbjct: 6 DPDVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMAL 185
Query: 360 IKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 539
+KKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYL
Sbjct: 186 VKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYL 365
Query: 540 AEFSISYKPVKHGRPGIGATHSSRFIPLK 626
AEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 366 AEFSISYKPVKHGRPGIGATHSSRFIPLK 452
Score = 199 bits (429), Expect = 2e-050
Identities = 98/137 (71%), Positives = 101/137 (73%)
Frame = -2 / -3
Query: 625 FRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGT 446
FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISGT
Sbjct: 451 FRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISGT 272
Query: 445 MIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXXX 266
+IMLRR V TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 271 IIMLRR*VLTGSGFSPAGASRFALRSFLTRAIGCLFKPR*NLLRARAWKSLTSSSEVMSK 92
Query: 265 XXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 91 RASRSTPL*ENFLNVLF 41
Score = 181 bits (390), Expect = 5e-045
Identities = 77/148 (52%), Positives = 101/148 (68%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+ NNA NHL +N
Sbjct: 449 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNANNATNHLRNN 270
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EM +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 269 YHVTEMSSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 90
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 89 GVQINTPVGELLERSLLRLHWTDIHIRV 6
Score = 116 bits (249), Expect = 1e-025
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +2 / +2
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS + SP HD+C DDW H W LQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 212 GSSCR*ETRAS*NSSP*HDNCS*DDW*HYWRLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 391
Query: 566 GQAREARYWCHSLLAVYPSE 625
A E YWC++LL VY SE
Sbjct: 392 S*AWETWYWCYTLL*VYSSE 451
>gb|BX680586.1|BX680586 BX680586 RS Pinus pinaster cDNA clone RS45E03, mRNA sequence
Length = 581
Score = 308 bits (667), Expect = 3e-083
Identities = 128/153 (83%), Positives = 142/153 (92%)
Frame = +3 / +3
Query: 171 ADVDVEPEVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKP 350
A D + +V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLKR+P
Sbjct: 51 AMADADVDVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQP 230
Query: 351 MALIKKLRKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIG 530
MAL+KKLRKAK+ AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIG
Sbjct: 231 MALVKKLRKAKRLAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 410
Query: 531 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 629
HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 411 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 509
Score = 206 bits (444), Expect = 2e-052
Identities = 98/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -2
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 508 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 329
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GA+ FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 328 TIIMLRRWVLTGSGFSPAGANRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 149
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 148 KRASRSTPL*ENFLNVLF 95
Score = 182 bits (391), Expect = 4e-045
Identities = 78/148 (52%), Positives = 103/148 (69%)
Frame = -1 / -1
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 503 QRNKPRGVRSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 324
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV E+G +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 323 YHVTEVGSNWLWFLTCRS*PFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELF*GHVQK 144
Query: 263 RIEVDAAVAVLAERPLLGSTGGDLRLHI 180
++++ V L ER LL D+ + +
Sbjct: 143 GVQINTPVGELLERSLLRLHWTDIHIRV 60
Score = 122 bits (260), Expect(2) = 2e-027
Identities = 49/79 (62%), Positives = 59/79 (74%)
Frame = +2 / +2
Query: 392 SCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQAGQ 571
SCR E RAS +P P HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 272 SCR*ETRAS*NPPP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*AS* 451
Query: 572 AREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 452 AWETWYWCYALL*VYSSEV 508
Score = 23.1 bits (44), Expect(2) = 2e-027
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1 / +1
Query: 160 LQTWRTSMW 186
LQ WRT MW
Sbjct: 46 LQPWRTRMW 72
>gb|AW011226.1|AW011226 ST18C02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18C02, mRNA sequence
Length = 599
Score = 308 bits (666), Expect = 5e-083
Identities = 126/146 (86%), Positives = 140/146 (95%)
Frame = +3 / +2
Query: 192 EVAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKL 371
+V PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLKR+PMAL+KKL
Sbjct: 14 DVGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALVKKL 193
Query: 372 RKAKKDAPVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFS 551
RKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFS
Sbjct: 194 RKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFS 373
Query: 552 ISYKPVKHGRPGIGATHSSRFIPLK* 629
ISYKPVKHGRPGIGATHSSRFIPLK*
Sbjct: 374 ISYKPVKHGRPGIGATHSSRFIPLK* 451
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 450 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 271
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 270 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 91
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 90 KRASRSTPL*ENFLNVLF 37
Score = 185 bits (398), Expect = 4e-046
Identities = 78/137 (56%), Positives = 99/137 (72%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 445 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 266
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 265 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 86
Query: 263 RIEVDAAVAVLAERPLL 213
++++ V L ER LL
Sbjct: 85 GVQINTPVGELLERSLL 35
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 208 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 387
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 388 S*AWETWYWCYTLL*VYSSEV 450
>gb|DR071310.1|DR071310 RTDK1_19_C01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C01_A029 3', mRNA sequence
Length = 860
Score = 307 bits (665), Expect = 6e-083
Identities = 125/140 (89%), Positives = 138/140 (98%)
Frame = +3 / +2
Query: 210 PKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKD 389
PKKRTF+K+SYRGVDLDALLDM++++LV+LF ARARRRFQRGLKR+PMAL+KKLRKAK++
Sbjct: 14 PKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALVKKLRKAKRE 193
Query: 390 APVGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 569
AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV
Sbjct: 194 APAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPV 373
Query: 570 KHGRPGIGATHSSRFIPLK* 629
KHGRPGIGATHSSRFIPLK*
Sbjct: 374 KHGRPGIGATHSSRFIPLK* 433
Score = 207 bits (447), Expect = 7e-053
Identities = 99/138 (71%), Positives = 103/138 (74%)
Frame = -2 / -3
Query: 628 HFRGINREE*VAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 449
+FRGIN EE VAPIPGLPCLTGL E+ENSAR*WPIISGLIST L V PL*TP MLPIISG
Sbjct: 432 YFRGINLEECVAPIPGLPCLTGLYEIENSAR*WPIISGLIST*LNVFPL*TPIMLPIISG 253
Query: 448 TMIMLRRWVFTGSGFSPTGASFFALRSFLMSAMGFLFKPLWNLLLARAGKSWTRXXXXXX 269
T+IMLRRWV TGSGFSP GAS FALRSFL A+G LFKP NLL ARA KS T
Sbjct: 252 TIIMLRRWVLTGSGFSPAGASRFALRSFLTKAIGCLFKPR*NLLRARAWKSLTSSSEVMS 73
Query: 268 XXXXXSTPR*LYLRNVLF 215
STP * NVLF
Sbjct: 72 KRASRSTPL*ENFLNVLF 19
Score = 185 bits (398), Expect = 4e-046
Identities = 78/137 (56%), Positives = 99/137 (72%)
Frame = -1 / -2
Query: 623 QRDKPRGVSGTNTGPPVLDRLVGNGELCKIVANHLRLDLNLVEGLAIVDTNNAPNHLGDN 444
QR+KPRGV TNT P+L+ L+ N +LC+I+ANHLRLD NL+E L IV+TNNA NHL +N
Sbjct: 427 QRNKPRGVCSTNTRSPMLNWLIRNRKLCQIMANHLRLDFNLIECLPIVNTNNATNHLRNN 248
Query: 443 DHVAEMGLHWLWLLADRSILFRLAQLLDERHGLPLQTPLEPSPGARWEELDEVVGGHVKQ 264
HV EMG +WLW L RS FRL +LLD+ H LPLQT L+PS EELDE+ GHV++
Sbjct: 247 YHVTEMGSNWLWFLTCRSFPFRLTELLDQGHWLPLQTSLKPSSSTSMEELDELFRGHVQK 68
Query: 263 RIEVDAAVAVLAERPLL 213
++++ V L ER LL
Sbjct: 67 GVQINTPVGELLERSLL 17
Score = 126 bits (270), Expect = 2e-028
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 386 GCSCRREARASEDPSPQHDHCPRDDWEHCWCLQWQDLQPG*DQA*DDWPLSCRVLHFLQA 565
G SCR E RAS +PSP HD+C DDW H WCLQW+D+Q G*+QA*DDWPLS RV +F+ A
Sbjct: 190 GSSCR*ETRAS*NPSP*HDNCS*DDW*HYWCLQWEDIQSG*NQA*DDWPLSGRVFYFV*A 369
Query: 566 GQAREARYWCHSLLAVYPSEM 628
A E YWC++LL VY SE+
Sbjct: 370 S*AWETWYWCYTLL*VYSSEV 432
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 418,349,724
Number of Sequences: 355925
Number of extensions: 5787859
Number of successful extensions: 39581
Number of sequences better than 1.0e-020: 161
length of database: 72,425,745
effective HSP length: 52
effective length of database: 53,917,645
effective search space used: 12347140705
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)