TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805139.2.1
(950 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AACV01025027.1| Oryza sativa (japonica cultivar-group) c... 186 e-110
emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC O... 186 e-109
gb|AU102060.1|AU102060 AU102060 Rice shoot Oryza sativa (ja... 365 e-107
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 186 e-102
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 186 e-102
dbj|AK102383.1| Oryza sativa (japonica cultivar-group) cDNA... 153 7e-072
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 186 8e-071
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 186 9e-071
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 186 9e-071
gb|AU102059.1|AU102059 AU102059 Rice shoot Oryza sativa (ja... 270 2e-070
dbj|AK058220.1| Oryza sativa (japonica cultivar-group) cDNA... 242 4e-068
dbj|AK058507.1| Oryza sativa (japonica cultivar-group) cDNA... 137 7e-064
ref|NM_187463.1| Oryza sativa (japonica cultivar-group), p... 137 8e-063
ref|XM_466988.1| Oryza sativa (japonica cultivar-group), mRNA 133 2e-060
dbj|AK069907.1| Oryza sativa (japonica cultivar-group) cDNA... 131 2e-059
ref|XM_473290.1| Oryza sativa (japonica cultivar-group), p... 130 6e-059
gb|CD670811.1|CD670811 OsMR230 5MT resistant rice mutant cD... 137 7e-058
dbj|AK072520.1| Oryza sativa (japonica cultivar-group) cDNA... 131 2e-057
ref|NM_197225.1| Oryza sativa (japonica cultivar-group) put... 131 2e-057
gb|BP185090.1|BP185090 BP185090 pNS rice panicle cDNA, flow... 131 2e-057
gb|AACV01013382.1| Oryza sativa (japonica cultivar-group) c... 103 1e-055
dbj|AP004995.3| Oryza sativa (japonica cultivar-group) geno... 103 2e-053
dbj|AG206808.1| Oryza sativa (japonica cultivar-group) DNA,... 186 2e-051
gb|AACV01006284.1| Oryza sativa (japonica cultivar-group) c... 99 7e-051
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 103 8e-049
gb|AC135208.3| Oryza sativa (japonica cultivar-group) chrom... 99 2e-048
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 103 4e-048
gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) c... 84 1e-046
dbj|AP004133.3| Oryza sativa (japonica cultivar-group) geno... 84 3e-046
dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chro... 84 6e-046
gb|AACV01010174.1| Oryza sativa (japonica cultivar-group) c... 83 1e-045
dbj|AP004768.3| Oryza sativa (japonica cultivar-group) geno... 84 1e-045
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 99 8e-044
emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromoso... 83 2e-043
emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromoso... 83 3e-043
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 99 2e-042
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 84 1e-040
gb|CV723028.1|CV723028 root--02-E17.g1 Rice root lambda pha... 132 5e-040
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 83 4e-039
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 83 1e-037
gb|AACV01021892.1| Oryza sativa (japonica cultivar-group) c... 82 3e-035
gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24... 82 6e-035
gb|CF323532.1|CF323532 HDN--04-B15.g1 OsHDAC1-overexpressin... 132 2e-034
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 82 6e-032
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 82 3e-031
gb|AU065317.1|AU065317 AU065317 Rice cDNA from immature lea... 129 4e-028
gb|AC135205.4| Oryza sativa (japonica cultivar-group) chrom... 73 8e-027
gb|AU029821.1|AU029821 AU029821 Rice panicle (between 3cm t... 113 4e-023
gb|AU165380.1|AU165380 AU165380 Rice panicle at flowering s... 113 4e-023
gb|AU030413.1|AU030413 AU030413 Rice cDNA from immature lea... 90 2e-022
gb|AU063991.1|AU063991 AU063991 Rice panicle at flowering s... 110 3e-022
>gb|AACV01025027.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg025027, whole
genome shotgun sequence
Length = 109020
Score = 186 bits (401), Expect(6) = e-110
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / -2
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 8882 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 8703
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 8702 HEKASQSGSVEDEDSEY*S 8646
Score = 132 bits (282), Expect(5) = 2e-063
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / +1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 8605 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 8784
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 8785 AM*FEGLMVHPP*QHLKQLL*YM 8853
Score = 123 bits (263), Expect(6) = e-110
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / -3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 10276 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 10130
Score = 96.4 bits (204), Expect(5) = 2e-063
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3 / +3
Query: 705 TPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAAV 884
+P + + +LRVPLQWW RKQALW* LSAVSLSTRYTVLS A+HLVVVP KEVA+A +
Sbjct: 10104 SPGPQPLMHTLRVPLQWWHRKQALW*TLLSAVSLSTRYTVLSHAMHLVVVP*KEVAIAQL 10283
Query: 885 VSL 893
L
Sbjct: 10284 PHL 10292
Score = 95.0 bits (201), Expect(5) = 3e-036
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = -1 / -1
Query: 524 LSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E 345
L+N G+C *H+V Q+LLQVL WR+HH P LH R EA+LQAPP+ DQ EGELQP *E
Sbjct: 8886 LTNSAGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRREALLQAPPYSVDQREGELQPT*E 8707
Query: 344 *PREDIXXXXXXXXXTRVLI 285
*P E I R+L+
Sbjct: 8706 *P*EGITIWICRG*RFRILV 8647
Score = 90.0 bits (190), Expect(6) = e-110
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2 / -2
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 632
L+LANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT
Sbjct: 9941 LQLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 9834
Score = 66.1 bits (138), Expect(6) = e-110
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -2 / -2
Query: 595 ENATKVSSAFAGTREKCVGCSKTVYPTERV 506
+NA KVSSAFAGTREKCVGC+KTVYP ERV
Sbjct: 9194 QNAIKVSSAFAGTREKCVGCNKTVYPIERV 9105
Score = 60.2 bits (125), Expect(5) = 3e-036
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -1 / -1
Query: 593 ECY*SLKRLCWHQREMCWMQQDSLSN*EG 507
ECY*SL+R+CWH+REM MQQDSLSN*+G
Sbjct: 9192 ECY*SLERICWHEREMRGMQQDSLSN*KG 9106
Score = 47.8 bits (98), Expect(5) = 2e-063
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +3
Query: 509 PLSWIDCLAASNTFLSGASKGA*DFSSIL 595
P +WIDCL AS+ FLS ASK A DF+SIL
Sbjct: 9108 PFNWIDCLVASHAFLSRASKCARDFNSIL 9194
Score = 43.2 bits (88), Expect(5) = 2e-063
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2 / +3
Query: 632 SSFEALVQAPCPLEQLVEVRPAVEHS 709
S+F+ALV PLEQL++VRPAVEHS
Sbjct: 9834 STFKALV*TSSPLEQLIKVRPAVEHS 9911
Score = 41.8 bits (85), Expect(5) = 3e-036
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -3
Query: 708 ECSTAGLTSTSCSRGQGAWTRASKELPRLSS 616
ECSTAGLT SCSRG TRA K L L+S
Sbjct: 9910 ECSTAGLTLISCSRGLEV*TRALKVLKSLTS 9818
Score = 40.9 bits (83), Expect(6) = e-110
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / -1
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 8616 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 8518
Score = 36.8 bits (74), Expect(5) = 2e-063
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / +2
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 8516 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 8617
Score = 35.4 bits (71), Expect(5) = 3e-036
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / -2
Query: 845 QVHRLRQDGVPCGQAHRR 792
QVH +RQDGVP QAHRR
Sbjct: 10244 QVHGVRQDGVPGRQAHRR 10191
Score = 31.8 bits (63), Expect(6) = e-110
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 637 GTPKVVKPERNVGNE 593
GTPKVVKPE+ V NE
Sbjct: 9736 GTPKVVKPEKTVENE 9692
Score = 30.4 bits (60), Expect(5) = 3e-036
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1 / -2
Query: 251 LAFA*STMYFCGVVRFQFYQWRSCVFREQ*Y 159
LAFA F V F Q RSC FREQ*Y
Sbjct: 8612 LAFAPEHHVFLCAVFTVFSQ*RSCAFREQ*Y 8520
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb
from chromosome 12 of cultivar Nipponbare of ssp.
japonica of Oryza sativa (rice), complete sequence
Length = 133659
Score = 186 bits (401), Expect(6) = e-109
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / -3
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 4564 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 4385
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 4384 HEKASQSGSVEDEDSEY*S 4328
Score = 132 bits (282), Expect(5) = 4e-063
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / +3
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 4287 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 4466
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 4467 AM*FEGLMVHPP*QHLKQLL*YM 4535
Score = 123 bits (263), Expect(6) = e-109
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / -1
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 5958 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 5812
Score = 96.4 bits (204), Expect(5) = 4e-063
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3 / +2
Query: 705 TPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAAV 884
+P + + +LRVPLQWW RKQALW* LSAVSLSTRYTVLS A+HLVVVP KEVA+A +
Sbjct: 5786 SPGPQPLMHTLRVPLQWWHRKQALW*TLLSAVSLSTRYTVLSHAMHLVVVP*KEVAIAQL 5965
Query: 885 VSL 893
L
Sbjct: 5966 PHL 5974
Score = 95.0 bits (201), Expect(5) = 6e-036
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = -1 / -2
Query: 524 LSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E 345
L+N G+C *H+V Q+LLQVL WR+HH P LH R EA+LQAPP+ DQ EGELQP *E
Sbjct: 4568 LTNSAGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRREALLQAPPYSVDQREGELQPT*E 4389
Query: 344 *PREDIXXXXXXXXXTRVLI 285
*P E I R+L+
Sbjct: 4388 *P*EGITIWICRG*RFRILV 4329
Score = 90.0 bits (190), Expect(6) = e-109
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2 / -3
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 632
L+LANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT
Sbjct: 5623 LQLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 5516
Score = 66.1 bits (138), Expect(6) = e-109
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -2 / -3
Query: 595 ENATKVSSAFAGTREKCVGCSKTVYPTERV 506
+NA KVSSAFAGTREKCVGC+KTVYP ERV
Sbjct: 4876 QNAIKVSSAFAGTREKCVGCNKTVYPIERV 4787
Score = 60.2 bits (125), Expect(5) = 6e-036
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -1 / -2
Query: 593 ECY*SLKRLCWHQREMCWMQQDSLSN*EG 507
ECY*SL+R+CWH+REM MQQDSLSN*+G
Sbjct: 4874 ECY*SLERICWHEREMRGMQQDSLSN*KG 4788
Score = 47.8 bits (98), Expect(5) = 4e-063
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 509 PLSWIDCLAASNTFLSGASKGA*DFSSIL 595
P +WIDCL AS+ FLS ASK A DF+SIL
Sbjct: 4790 PFNWIDCLVASHAFLSRASKCARDFNSIL 4876
Score = 43.2 bits (88), Expect(5) = 4e-063
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2 / +2
Query: 632 SSFEALVQAPCPLEQLVEVRPAVEHS 709
S+F+ALV PLEQL++VRPAVEHS
Sbjct: 5516 STFKALV*TSSPLEQLIKVRPAVEHS 5593
Score = 41.8 bits (85), Expect(5) = 6e-036
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 708 ECSTAGLTSTSCSRGQGAWTRASKELPRLSS 616
ECSTAGLT SCSRG TRA K L L+S
Sbjct: 5592 ECSTAGLTLISCSRGLEV*TRALKVLKSLTS 5500
Score = 40.9 bits (83), Expect(6) = e-109
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / -2
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 4298 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 4200
Score = 36.8 bits (74), Expect(5) = 4e-063
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / +1
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 4198 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 4299
Score = 35.4 bits (71), Expect(5) = 6e-036
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 845 QVHRLRQDGVPCGQAHRR 792
QVH +RQDGVP QAHRR
Sbjct: 5926 QVHGVRQDGVPGRQAHRR 5873
Score = 31.8 bits (63), Expect(6) = e-109
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 637 GTPKVVKPERNVGNE 593
GTPKVVKPE+ V NE
Sbjct: 5418 GTPKVVKPEKTVENE 5374
Score = 30.4 bits (60), Expect(5) = 6e-036
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1 / -3
Query: 251 LAFA*STMYFCGVVRFQFYQWRSCVFREQ*Y 159
LAFA F V F Q RSC FREQ*Y
Sbjct: 4294 LAFAPEHHVFLCAVFTVFSQ*RSCAFREQ*Y 4202
>gb|AU102060.1|AU102060 AU102060 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6194, mRNA sequence
Length = 687
Score = 365 bits (791), Expect(3) = e-107
Identities = 141/158 (89%), Positives = 150/158 (94%)
Frame = -2 / +2
Query: 757 HHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKV 578
HHC+GT +LANYN FEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPE+ V NENA KV
Sbjct: 2 HHCQGTPQLANYNXFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPEKTVENENAIKV 181
Query: 577 SSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK 398
SSAFAGTREKCVGC+KTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK
Sbjct: 182 SSAFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK 361
Query: 397 HHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDEQEY*S 284
HHHIQLIKEKGNFSQLENDHEK SQ+GS+E+++ EY*S
Sbjct: 362 HHHIQLIKEKGNFSQLENDHEKASQSGSVEDEDSEY*S 475
Score = 224 bits (484), Expect(3) = 2e-063
Identities = 102/172 (59%), Positives = 108/172 (62%)
Frame = +3 / -1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 516 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 337
Query: 423 AM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFSLVPAKALETLVAFSFP 602
AM* EGLMVHPP QHLKQLL Y+ HPTHFSLVPA ALETL+AFSF
Sbjct: 336 AM*FEGLMVHPP*QHLKQLL*YMVLLTVTLSIG*TVLLHPTHFSLVPANALETLIAFSFS 157
Query: 603 TFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSKEL*LASLRVPLQWW 758
T SGLTT G NS SK*GLQ*STPS L* AS VP QWW
Sbjct: 156 TVFSGLTTFGVPSKLLSKLPVLLNS*SK*GLQ*STPSNXL*FAS*GVPWQWW 1
Score = 201 bits (433), Expect(3) = 1e-053
Identities = 94/149 (63%), Positives = 110/149 (73%)
Frame = -1 / +1
Query: 731 RQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQR 552
R+LQ + SALLQASL AVQED + QEL RNS+GCQARK E*ECY*SL+R+CWH+R
Sbjct: 28 RELQXV*RSALLQASL*SAVQEDWKFRQEL*RNSKGCQARKNS*E*ECY*SLERICWHER 207
Query: 551 EMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQG 372
EM MQQDSLSN*+G+C *H+V Q+LLQVL WR+HH P LH R EA+LQAPP+ DQ
Sbjct: 208 EMRGMQQDSLSN*KGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRREALLQAPPYSVDQR 387
Query: 371 EGELQPA*E*PREDIXXXXXXXXXTRVLI 285
EGELQP *E*P E I R+L+
Sbjct: 388 EGELQPT*E*P*EGITIWICRG*RFRILV 474
Score = 141 bits (303), Expect(2) = 1e-035
Identities = 63/95 (66%), Positives = 75/95 (78%)
Frame = +2 / -3
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+ A+GA SM ALEAA V+H VI+S+P +WIDCL AS+ FLS ASK A DF+SILI N
Sbjct: 334 DVI*GANGASSMTALEAAFVIHGVIDSNPFNWIDCLVASHAFLSRASKCARDFNSILILN 155
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEHS 709
FWLDNL SSF+ALV PLEQL++VRPAVEHS
Sbjct: 154 CFFWLDNLWSSFKALV*TSSPLEQLIKVRPAVEHS 50
Score = 131 bits (280), Expect(2) = 5e-031
Identities = 64/90 (71%), Positives = 68/90 (75%)
Frame = -3 / +3
Query: 708 ECSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAAR 529
ECSTAGLT SCSRG TRA KEL RLSSQK+ L MRMLLKS+A LLA ERN DA R
Sbjct: 51 ECSTAGLTLISCSRGLEV*TRALKELQRLSSQKKQLRMRMLLKSRAHLLARERNAWDATR 230
Query: 528 QSIQLRGSLLITLCTTRAASSAAMEGAPSA 439
QSIQL+G L IT C T+AASSA ME AP A
Sbjct: 231 QSIQLKGLLSITPCITKAASSAVMEDAPLA 320
Score = 40.9 bits (83), Expect(3) = e-107
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 505 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 603
Score = 36.8 bits (74), Expect(3) = 2e-063
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / -2
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 605 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 504
Score = 35.4 bits (71), Expect(2) = 1e-035
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1 / -1
Query: 160 YHCSLNTHDLHW*N*NRTTPQKYIVL*ANAR 252
Y+CSLN HDLHW +T +K A AR
Sbjct: 600 YYCSLNAHDLHWEKTVKTAQRKTWCSGAKAR 508
Score = 30.4 bits (60), Expect(2) = 5e-031
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 251 LAFA*STMYFCGVVRFQFYQWRSCVFREQ*Y 159
LAFA F V F Q RSC FREQ*Y
Sbjct: 509 LAFAPEHHVFLCAVFTVFSQ*RSCAFREQ*Y 601
Score = 28.6 bits (56), Expect(3) = 1e-053
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2 / +3
Query: 199 FTNGGHVCSENNDIVVLYLHVNVVIFESDTL 107
F N GHV SENN+I+ L +++ S +
Sbjct: 561 FPNEGHVHSENNNIIWLVSACKTLLYWSQNV 653
Score = 26.3 bits (51), Expect(3) = e-107
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 137 KRCYL*VRYSTWF 99
K CY+ VR STWF
Sbjct: 625 KPCYIGVRMSTWF 663
Score = 24.9 bits (48), Expect(3) = 2e-063
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / -1
Query: 99 KPGRVSDSKITTF 137
KPGR SDS IT F
Sbjct: 663 KPGRHSDSNITRF 625
Score = 24.0 bits (46), Expect(3) = 1e-053
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3 / +2
Query: 273 PQMNNESSCICLEHYVFL 220
P++NN+ EH+VFL
Sbjct: 488 PEINNDLLAFAPEHHVFL 541
>gb|CH401281.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000118
genomic scaffold, whole genome shotgun sequence
Length = 3660441
Score = 186 bits (401), Expect(6) = e-102
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / +1
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 852895 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 853074
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 853075 HEKASQSGSVEDEDSEY*S 853131
Score = 132 bits (282), Expect(5) = 1e-057
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / -2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 853172 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 852993
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 852992 AM*FEGLMVHPP*QHLKQLL*YM 852924
Score = 123 bits (263), Expect(6) = e-102
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 851501 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 851647
Score = 96.4 bits (204), Expect(5) = 1e-057
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3 / -1
Query: 705 TPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAAV 884
+P + + +LRVPLQWW RKQALW* LSAVSLSTRYTVLS A+HLVVVP KEVA+A +
Sbjct: 851673 SPGPQPLMHTLRVPLQWWHRKQALW*TLLSAVSLSTRYTVLSHAMHLVVVP*KEVAIAQL 851494
Query: 885 VSL 893
L
Sbjct: 851493 PHL 851485
Score = 95.0 bits (201), Expect(4) = 4e-030
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = -1 / +3
Query: 524 LSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E 345
L+N G+C *H+V Q+LLQVL WR+HH P LH R EA+LQAPP+ DQ EGELQP *E
Sbjct: 852891 LTNSAGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRREALLQAPPYSVDQREGELQPT*E 853070
Query: 344 *PREDIXXXXXXXXXTRVLI 285
*P E I R+L+
Sbjct: 853071 *P*EGITIWICRG*RFRILV 853130
Score = 90.0 bits (190), Expect(6) = e-102
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 632
L+LANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT
Sbjct: 851836 LQLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 851943
Score = 66.1 bits (138), Expect(6) = e-102
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -2 / +1
Query: 595 ENATKVSSAFAGTREKCVGCSKTVYPTERV 506
+NA KVSSAFAGTREKCVGC+KTVYP ERV
Sbjct: 852583 QNAIKVSSAFAGTREKCVGCNKTVYPIERV 852672
Score = 60.2 bits (125), Expect(4) = 4e-030
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 593 ECY*SLKRLCWHQREMCWMQQDSLSN*EG 507
ECY*SL+R+CWH+REM MQQDSLSN*+G
Sbjct: 852585 ECY*SLERICWHEREMRGMQQDSLSN*KG 852671
Score = 47.8 bits (98), Expect(5) = 1e-057
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / -1
Query: 509 PLSWIDCLAASNTFLSGASKGA*DFSSIL 595
P +WIDCL AS+ FLS ASK A DF+SIL
Sbjct: 852669 PFNWIDCLVASHAFLSRASKCARDFNSIL 852583
Score = 43.2 bits (88), Expect(5) = 1e-057
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2 / -1
Query: 632 SSFEALVQAPCPLEQLVEVRPAVEHS 709
S+F+ALV PLEQL++VRPAVEHS
Sbjct: 851943 STFKALV*TSSPLEQLIKVRPAVEHS 851866
Score = 41.8 bits (85), Expect(4) = 4e-030
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / +2
Query: 708 ECSTAGLTSTSCSRGQGAWTRASKELPRLSS 616
ECSTAGLT SCSRG TRA K L L+S
Sbjct: 851867 ECSTAGLTLISCSRGLEV*TRALKVLKSLTS 851959
Score = 40.9 bits (83), Expect(6) = e-102
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 853161 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 853259
Score = 36.8 bits (74), Expect(5) = 1e-057
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / -3
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 853261 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 853160
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QVH +RQDGVP QAHRR
Sbjct: 851533 QVHGVRQDGVPGRQAHRR 851586
Score = 31.8 bits (63), Expect(6) = e-102
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 637 GTPKVVKPERNVGNE 593
GTPKVVKPE+ V NE
Sbjct: 852041 GTPKVVKPEKTVENE 852085
>ref|NT_079837.2| Oryza sativa (japonica cultivar-group)
Length = 3671013
Score = 186 bits (401), Expect(6) = e-102
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / +1
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 2032186 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 2032365
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 2032366 HEKASQSGSVEDEDSEY*S 2032422
Score = 132 bits (282), Expect(5) = 1e-057
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / -2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 2032463 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 2032284
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 2032283 AM*FEGLMVHPP*QHLKQLL*YM 2032215
Score = 123 bits (263), Expect(6) = e-102
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 2030792 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 2030938
Score = 96.4 bits (204), Expect(5) = 1e-057
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +3 / -1
Query: 705 TPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAAV 884
+P + + +LRVPLQWW RKQALW* LSAVSLSTRYTVLS A+HLVVVP KEVA+A +
Sbjct: 2030964 SPGPQPLMHTLRVPLQWWHRKQALW*TLLSAVSLSTRYTVLSHAMHLVVVP*KEVAIAQL 2030785
Query: 885 VSL 893
L
Sbjct: 2030784 PHL 2030776
Score = 95.0 bits (201), Expect(4) = 4e-030
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = -1 / +3
Query: 524 LSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E 345
L+N G+C *H+V Q+LLQVL WR+HH P LH R EA+LQAPP+ DQ EGELQP *E
Sbjct: 2032182 LTNSAGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRREALLQAPPYSVDQREGELQPT*E 2032361
Query: 344 *PREDIXXXXXXXXXTRVLI 285
*P E I R+L+
Sbjct: 2032362 *P*EGITIWICRG*RFRILV 2032421
Score = 90.0 bits (190), Expect(6) = e-102
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 632
L+LANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT
Sbjct: 2031127 LQLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGT 2031234
Score = 66.1 bits (138), Expect(6) = e-102
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = -2 / +1
Query: 595 ENATKVSSAFAGTREKCVGCSKTVYPTERV 506
+NA KVSSAFAGTREKCVGC+KTVYP ERV
Sbjct: 2031874 QNAIKVSSAFAGTREKCVGCNKTVYPIERV 2031963
Score = 60.2 bits (125), Expect(4) = 4e-030
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -1 / +3
Query: 593 ECY*SLKRLCWHQREMCWMQQDSLSN*EG 507
ECY*SL+R+CWH+REM MQQDSLSN*+G
Sbjct: 2031876 ECY*SLERICWHEREMRGMQQDSLSN*KG 2031962
Score = 47.8 bits (98), Expect(5) = 1e-057
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2 / -1
Query: 509 PLSWIDCLAASNTFLSGASKGA*DFSSIL 595
P +WIDCL AS+ FLS ASK A DF+SIL
Sbjct: 2031960 PFNWIDCLVASHAFLSRASKCARDFNSIL 2031874
Score = 43.2 bits (88), Expect(5) = 1e-057
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2 / -1
Query: 632 SSFEALVQAPCPLEQLVEVRPAVEHS 709
S+F+ALV PLEQL++VRPAVEHS
Sbjct: 2031234 STFKALV*TSSPLEQLIKVRPAVEHS 2031157
Score = 41.8 bits (85), Expect(4) = 4e-030
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / +2
Query: 708 ECSTAGLTSTSCSRGQGAWTRASKELPRLSS 616
ECSTAGLT SCSRG TRA K L L+S
Sbjct: 2031158 ECSTAGLTLISCSRGLEV*TRALKVLKSLTS 2031250
Score = 40.9 bits (83), Expect(6) = e-102
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 2032452 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 2032550
Score = 36.8 bits (74), Expect(5) = 1e-057
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / -3
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 2032552 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 2032451
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QVH +RQDGVP QAHRR
Sbjct: 2030824 QVHGVRQDGVPGRQAHRR 2030877
Score = 31.8 bits (63), Expect(6) = e-102
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / +2
Query: 637 GTPKVVKPERNVGNE 593
GTPKVVKPE+ V NE
Sbjct: 2031332 GTPKVVKPEKTVENE 2031376
>dbj|AK102383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C12, full
insert sequence
Length = 4323
Score = 153 bits (328), Expect(2) = 7e-072
Identities = 55/93 (59%), Positives = 73/93 (78%)
Frame = -2 / +3
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCR 692
A ++ GTT KC +C +TVY V++L AD R+YH+ CFRC HCK TL+ +NY+S EGVLYC+
Sbjct: 255 AAAWGGTTQKCDSCGRTVYTVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYCK 434
Query: 691 PHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNE 593
PH+DQ+ K TGSL+KSFEGT K K E++ GN+
Sbjct: 435 PHYDQILKSTGSLEKSFEGTSKSAKAEKSNGNK 533
Score = 142 bits (305), Expect(2) = 7e-072
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = -2 / +3
Query: 583 KVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLY 404
+ SS F GT++KCV C+KTVYP E+V +N + YHKSCF+C HGGCT+SPSN + HEGKLY
Sbjct: 546 RFSSMFVGTQDKCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLY 725
Query: 403 CKHHHIQLIKEKGNFSQLEN 344
CK HH QL KGNFS E+
Sbjct: 726 CKTHHSQLFMVKGNFSNFED 785
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 186 bits (401), Expect(2) = 8e-071
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / +2
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 16376000 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 16376179
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 16376180 HEKASQSGSVEDEDSEY*S 16376236
Score = 132 bits (282), Expect = 8e-029
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / -1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 16376277 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 16376098
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 16376097 AM*FEGLMVHPP*QHLKQLL*YM 16376029
Score = 123 bits (263), Expect(2) = 8e-071
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 16374606 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 16374752
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 186 bits (401), Expect(2) = 9e-071
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / +2
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 19648643 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 19648822
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 19648823 HEKASQSGSVEDEDSEY*S 19648879
Score = 132 bits (282), Expect = 8e-029
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / -3
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 19648920 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 19648741
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 19648740 AM*FEGLMVHPP*QHLKQLL*YM 19648672
Score = 123 bits (263), Expect(2) = 9e-071
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 19647249 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 19647395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 186 bits (401), Expect(2) = 9e-071
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / +3
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 19722429 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 19722608
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 19722609 HEKASQSGSVEDEDSEY*S 19722665
Score = 132 bits (282), Expect = 8e-029
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / -2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 19722706 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 19722527
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 19722526 AM*FEGLMVHPP*QHLKQLL*YM 19722458
Score = 123 bits (263), Expect(2) = 9e-071
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = -2 / +1
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLK+
Sbjct: 19721035 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKV 19721181
>gb|AU102059.1|AU102059 AU102059 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6194, mRNA sequence
Length = 404
Score = 270 bits (584), Expect = 2e-070
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 65 AMATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 244
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVG 539
CRPHFDQLFKRTGSLDKSFEGTPKVVKPE+ V NENA KVSSAFAGTREKCVG
Sbjct: 245 CRPHFDQLFKRTGSLDKSFEGTPKVVKPEKTVENENAIKVSSAFAGTREKCVG 403
Score = 179 bits (385), Expect = 5e-043
Identities = 85/118 (72%), Positives = 89/118 (75%)
Frame = +3 / -3
Query: 540 PTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSKE 719
PTHFSLVPA ALETL+AFSF T SGLTT G NS SK*GLQ*STPS E
Sbjct: 402 PTHFSLVPANALETLIAFSFSTVFSGLTTFGVPSKLLSKLPVLLNS*SK*GLQ*STPSNE 223
Query: 720 L*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAAVVSL 893
L* ASLRVPLQWW RKQALW* LSAVSLSTRYTVLS A+HLVVVP KEVA+A + L
Sbjct: 222 L*FASLRVPLQWWHRKQALW*TLLSAVSLSTRYTVLSHAMHLVVVP*KEVAIAQLPHL 49
Score = 99.6 bits (211), Expect(2) = 8e-024
Identities = 45/63 (71%), Positives = 52/63 (82%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+ SALLQASL AVQED + QEL RNS+GCQARK E*ECY*SL+R+CWH+
Sbjct: 208 ARELQLV*RSALLQASL*SAVQEDWKFRQEL*RNSKGCQARKNS*E*ECY*SLERICWHE 387
Query: 554 REM 546
REM
Sbjct: 388 REM 396
Score = 35.4 bits (71), Expect(2) = 8e-024
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QVH +RQDGVP QAHRR
Sbjct: 97 QVHGVRQDGVPGRQAHRR 150
>dbj|AK058220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F09, full
insert sequence
Length = 488
Score = 242 bits (523), Expect(2) = 4e-068
Identities = 93/103 (90%), Positives = 99/103 (96%)
Frame = -2 / +1
Query: 592 NATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEG 413
NA KVSSAFAGTREKCVGC+KTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEG
Sbjct: 1 NAIKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEG 180
Query: 412 KLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDEQEY*S 284
KLYCKHHHIQLIKEKGNFSQLENDHEK SQ+GS+E+++ EY*S
Sbjct: 181 KLYCKHHHIQLIKEKGNFSQLENDHEKASQSGSVEDEDSEY*S 309
Score = 165 bits (354), Expect(2) = 9e-044
Identities = 70/116 (60%), Positives = 76/116 (65%)
Frame = +3 / -1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 350 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 171
Query: 423 AM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFSLVPAKALETLVA 590
AM* EGLMVHPP QHLKQLL Y+ HPTHFSLVPA ALETL+A
Sbjct: 170 AM*FEGLMVHPP*QHLKQLL*YMVLLTVTLSIG*TVLLHPTHFSLVPANALETLIA 3
Score = 144 bits (309), Expect(3) = 7e-037
Identities = 63/102 (61%), Positives = 75/102 (73%)
Frame = -1 / +3
Query: 590 CY*SLKRLCWHQREMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGE 411
CY*SL+R+CWH+REM MQQDSLSN*+G+C *H+V Q+LLQVL WR+HH P LH R E
Sbjct: 3 CY*SLERICWHEREMRGMQQDSLSN*KGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRRE 182
Query: 410 AVLQAPPHPADQGEGELQPA*E*PREDIXXXXXXXXXTRVLI 285
A+LQAPP+ DQ EGELQP *E*P E I R+L+
Sbjct: 183 ALLQAPPYSVDQREGELQPT*E*P*EGITIWICRG*RFRILV 308
Score = 40.9 bits (83), Expect(2) = 4e-068
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 339 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 437
Score = 36.8 bits (74), Expect(2) = 9e-044
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / -2
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 439 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 338
Score = 28.6 bits (56), Expect(3) = 7e-037
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2 / +2
Query: 199 FTNGGHVCSENNDIVVLYLHVNVVIFESDTL 107
F N GHV SENN+I+ L +++ S +
Sbjct: 395 FPNEGHVHSENNNIIWLVSACKTLLYWSQNV 487
Score = 24.0 bits (46), Expect(3) = 7e-037
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 273 PQMNNESSCICLEHYVFL 220
P++NN+ EH+VFL
Sbjct: 322 PEINNDLLAFAPEHHVFL 375
>dbj|AK058507.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G03, full
insert sequence
Length = 962
Score = 137 bits (293), Expect(2) = 7e-064
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT+EKC CSKT YP E+VTV YHKSCFKC HGGC ISPSNY A EG L
Sbjct: 459 SKAARMFSGTQEKCATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGIL 638
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 639 YCKHHFSQLFKEKGSYNHL 695
Score = 132 bits (282), Expect(2) = 7e-064
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = -2 / +3
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCR 692
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL L NY+S EGV YC+
Sbjct: 171 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCK 350
Query: 691 PHFDQLFKRTGSLDKSFEGTPK 626
PHF+QLFK TGS +KSF+ K
Sbjct: 351 PHFEQLFKETGSYNKSFQSPAK 416
>ref|NM_187463.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 591
Score = 137 bits (293), Expect(2) = 8e-063
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT+EKC CSKT YP E+VTV YHKSCFKC HGGC ISPSNY A EG L
Sbjct: 283 SKAARMFSGTQEKCATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGIL 462
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 463 YCKHHFSQLFKEKGSYNHL 519
Score = 128 bits (274), Expect(2) = 8e-063
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = -2 / +1
Query: 862 FQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHF 683
F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL L NY+S EGV YC+PHF
Sbjct: 4 FSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHF 183
Query: 682 DQLFKRTGSLDKSFEGTPK 626
+QLFK TGS +KSF+ K
Sbjct: 184 EQLFKETGSYNKSFQSPAK 240
>ref|XM_466988.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 621
Score = 133 bits (284), Expect(2) = 2e-060
Identities = 48/75 (64%), Positives = 56/75 (74%)
Frame = -2 / +1
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
SF GT KC ACDKTV+ +D LTAD YHK CF+C HCKGTL + NY+S +GVLYC+ H
Sbjct: 4 SFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTH 183
Query: 685 FDQLFKRTGSLDKSF 641
F+QLFK TGS K F
Sbjct: 184 FEQLFKETGSFSKKF 228
Score = 124 bits (265), Expect(2) = 2e-060
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SSAF+GT++KC C KTVYP E++T+ YHKSCFKC HGGC ++ S+Y A G L
Sbjct: 277 SKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGIL 456
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCK H QL KEKG+++ L
Sbjct: 457 YCKIHFSQLFKEKGSYNHL 513
>dbj|AK069907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034M24, full
insert sequence
Length = 955
Score = 131 bits (281), Expect(2) = 2e-059
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = -2 / +2
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSF 713
R ++ SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S
Sbjct: 41 RRQSSLATMSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSM 220
Query: 712 EGVLYCRPHFDQLFKRTGSLDKSF 641
+GVLYC+ HF+QLFK TGS K F
Sbjct: 221 DGVLYCKTHFEQLFKETGSFSKKF 292
Score = 122 bits (261), Expect(2) = 2e-059
Identities = 45/97 (46%), Positives = 63/97 (64%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+ SAF+GT++KC C KTVYP E++T+ YHKSCFKC HGGC ++ S+Y A G L
Sbjct: 338 SKICSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVL 517
Query: 406 YCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDEQ 296
YCK H QL EKG+++ ++ E + +EQ
Sbjct: 518 YCKIHFGQLFMEKGSYNHMKKKSESQEVLPEVVPEEQ 628
>ref|XM_473290.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 606
Score = 130 bits (278), Expect(2) = 6e-059
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = -2 / +1
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GVLYC+ H
Sbjct: 4 SFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 183
Query: 685 FDQLFKRTGSLDKSF 641
F+QLFK TGS K F
Sbjct: 184 FEQLFKETGSFSKKF 228
Score = 122 bits (261), Expect(2) = 6e-059
Identities = 45/97 (46%), Positives = 63/97 (64%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+ SAF+GT++KC C KTVYP E++T+ YHKSCFKC HGGC ++ S+Y A G L
Sbjct: 274 SKICSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVL 453
Query: 406 YCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDEQ 296
YCK H QL EKG+++ ++ E + +EQ
Sbjct: 454 YCKIHFGQLFMEKGSYNHMKKKSESQEVLPEVVPEEQ 564
>gb|CD670811.1|CD670811 OsMR230 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 612
Score = 137 bits (293), Expect(2) = 7e-058
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT+EKC CSKT YP E+VTV YHKSCFKC HGGC ISPSNY A EG L
Sbjct: 298 SKAARMFSGTQEKCATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGIL 477
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 478 YCKHHFSQLFKEKGSYNHL 534
Score = 111 bits (238), Expect(2) = 7e-058
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = -2 / +1
Query: 826 KTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDK 647
KTVY +D+L+ D ++H++CF+C HCK TL L NY+S EGV YC+PHF+QLFK TGS +K
Sbjct: 55 KTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLFKETGSYNK 234
Query: 646 SFEGTPK 626
SF+ K
Sbjct: 235 SFQSPAK 255
>dbj|AK072520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131K23, full
insert sequence
Length = 1267
Score = 131 bits (280), Expect(2) = 2e-057
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = -2 / +1
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL + +Y+S +GVLYC+ H
Sbjct: 202 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTH 381
Query: 685 FDQLFKRTGSLDKSFEGTPK 626
F+QLFK TG+ K+F K
Sbjct: 382 FEQLFKETGTFKKNFPSGTK 441
Score = 116 bits (248), Expect(2) = 2e-057
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SS F GT++KC C KTVYP E++T+ YH++CFKC HGGC ++ ++Y +H G L
Sbjct: 469 SKLSSVFCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGIL 648
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YC++H QL K+ G++ L
Sbjct: 649 YCQNHFWQLFKKSGSYDNL 705
>ref|NM_197225.1| Oryza sativa (japonica cultivar-group) putative LIM domain protein
(OSJNBb0073N24.9), mRNA
Length = 1040
Score = 131 bits (280), Expect(2) = 2e-057
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = -2 / +1
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL + +Y+S +GVLYC+ H
Sbjct: 181 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTH 360
Query: 685 FDQLFKRTGSLDKSFEGTPK 626
F+QLFK TG+ K+F K
Sbjct: 361 FEQLFKETGTFKKNFPSGTK 420
Score = 116 bits (248), Expect(2) = 2e-057
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SS F GT++KC C KTVYP E++T+ YH++CFKC HGGC ++ ++Y +H G L
Sbjct: 448 SKLSSVFCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGIL 627
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YC++H QL K+ G++ L
Sbjct: 628 YCQNHFWQLFKKSGSYDNL 684
>gb|BP185090.1|BP185090 BP185090 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone pNS-YP32, mRNA
sequence
Length = 595
Score = 131 bits (280), Expect(2) = 2e-057
Identities = 47/80 (58%), Positives = 60/80 (75%)
Frame = -2 / +1
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL + +Y+S +GVLYC+ H
Sbjct: 64 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTH 243
Query: 685 FDQLFKRTGSLDKSFEGTPK 626
F+QLFK TG+ K+F K
Sbjct: 244 FEQLFKETGTFKKNFPSGTK 303
Score = 116 bits (248), Expect(2) = 2e-057
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SS F GT++KC C KTVYP E++T+ YH++CFKC HGGC ++ ++Y +H G L
Sbjct: 331 SKLSSVFCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGIL 510
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YC++H QL K+ G++ L
Sbjct: 511 YCQNHFWQLFKKSGSYDNL 567
>gb|AACV01013382.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013382, whole
genome shotgun sequence
Length = 24924
Score = 103 bits (219), Expect(4) = 1e-055
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -2 / -3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEN 344
+V +N + YHKSCF+C HGGCT+SPSN + HEGKLYCK HH QL KGNFS E+
Sbjct: 22813 QVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVKGNFSNFED 22646
Score = 76.7 bits (161), Expect(4) = 1e-055
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = -2 / -3
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
A ++ GTT KC +C +TVY V++L AD R+YH+ CFRC HCK TL++
Sbjct: 24889 AAAWGGTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQV 24749
Score = 71.6 bits (150), Expect(4) = 1e-055
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2 / -3
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK 617
L+ +NY+S EGVLYC+PH+DQ+ K TGSL+KSFEGT + K
Sbjct: 23920 LQFSNYSSVEGVLYCKPHYDQILKSTGSLEKSFEGTEEKTK 23798
Score = 46.4 bits (95), Expect(4) = 1e-055
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 583 KVSSAFAGTREKCVGCSKTVYPTERVTV 500
+ SS F GT++KCV C+KTVYP E+V++
Sbjct: 23498 RFSSMFVGTQDKCVVCNKTVYPLEKVSI 23415
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0068B06
Length = 143712
Score = 103 bits (219), Expect(4) = 2e-053
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -2 / -2
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEN 344
+V +N + YHKSCF+C HGGCT+SPSN + HEGKLYCK HH QL KGNFS E+
Sbjct: 25901 QVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVKGNFSNFED 25734
Score = 76.7 bits (161), Expect(4) = 2e-053
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = -2 / -2
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
A ++ GTT KC +C +TVY V++L AD R+YH+ CFRC HCK TL++
Sbjct: 27977 AAAWGGTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQV 27837
Score = 71.6 bits (150), Expect(4) = 2e-053
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2 / -2
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK 617
L+ +NY+S EGVLYC+PH+DQ+ K TGSL+KSFEGT + K
Sbjct: 27008 LQFSNYSSVEGVLYCKPHYDQILKSTGSLEKSFEGTEEKTK 26886
Score = 46.4 bits (95), Expect(4) = 2e-053
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 583 KVSSAFAGTREKCVGCSKTVYPTERVTV 500
+ SS F GT++KCV C+KTVYP E+V++
Sbjct: 26586 RFSSMFVGTQDKCVVCNKTVYPLEKVSI 26503
>dbj|AG206808.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND6021_0_701_1A,
3' flanking sequence of Tos17 insertion in rice strain
ND6021, genomic survey sequence
Length = 441
Score = 186 bits (401), Expect(2) = 2e-051
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / +2
Query: 520 PTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 341
PT +VTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND
Sbjct: 26 PTLQVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEND 205
Query: 340 HEKTSQAGSLEEDEQEY*S 284
HEK SQ+GS+E+++ EY*S
Sbjct: 206 HEKASQSGSVEDEDSEY*S 262
Score = 132 bits (282), Expect(2) = 6e-034
Identities = 54/83 (65%), Positives = 59/83 (71%)
Frame = +3 / -1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPACDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSC 422
K +R + S D Y DP CD FSWSFSSWLKFPFSLI+ +WWCLQ SFPSC
Sbjct: 303 KARRSLFISGNFSKD*YSESSSSTDPDCDAFSWSFSSWLKFPFSLIN*IWWCLQ*SFPSC 124
Query: 423 AM*LEGLMVHPPWQHLKQLLWYI 491
AM* EGLMVHPP QHLKQLL Y+
Sbjct: 123 AM*FEGLMVHPP*QHLKQLL*YM 55
Score = 95.0 bits (201), Expect(3) = 2e-022
Identities = 44/80 (55%), Positives = 53/80 (66%)
Frame = -1 / +1
Query: 524 LSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E 345
L+N G+C *H+V Q+LLQVL WR+HH P LH R EA+LQAPP+ DQ EGELQP *E
Sbjct: 22 LTNSAGYCQ*HHVSQKLLQVLSWRMHH*PLKLHRTRREALLQAPPYSVDQREGELQPT*E 201
Query: 344 *PREDIXXXXXXXXXTRVLI 285
*P E I R+L+
Sbjct: 202 *P*EGITIWICRG*RFRILV 261
Score = 40.9 bits (83), Expect(2) = 2e-051
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 255 SSCICLEHYVFLWRGSISVLPMEVMCVQRTMIL 157
SSC C RG S PM+VMC+QRT+IL
Sbjct: 292 SSCFCSRAPCLSLRGLYSFFPMKVMCIQRTIIL 390
Score = 36.8 bits (74), Expect(2) = 6e-034
Identities = 19/34 (55%), Positives = 19/34 (55%)
Frame = +2 / -2
Query: 155 NNIIVL*THMTSIGKTEIEPRHRNT*CSRQMQED 256
NNIIVL* HMT IGK PR Q QED
Sbjct: 392 NNIIVL*MHMTFIGKKL*RPRKERHGALEQKQED 291
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2 / +3
Query: 199 FTNGGHVCSENNDIVVLYLHVNVVIFESDTL 107
F N GHV SENN+I+ L +++ S +
Sbjct: 348 FPNEGHVHSENNNIIWLVSACKTLLYWSQNV 440
Score = 24.0 bits (46), Expect(3) = 2e-022
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3 / +2
Query: 273 PQMNNESSCICLEHYVFL 220
P++NN+ EH+VFL
Sbjct: 275 PEINNDLLAFAPEHHVFL 328
>gb|AACV01006284.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006284, whole
genome shotgun sequence
Length = 17397
Score = 99.1 bits (210), Expect(4) = 7e-051
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -2 / +1
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+VTV YHKSCFKC HGGC ISPSNY A EG LYCKHH QL KEKG+++ L
Sbjct: 1900 QVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL 2061
Score = 73.0 bits (153), Expect(4) = 7e-051
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +2
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL +
Sbjct: 614 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSV 754
Score = 63.4 bits (132), Expect(4) = 7e-051
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -2 / +2
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
L+L NY+S EGV YC+PHF+QLFK TGS +KSF+
Sbjct: 1166 LQLGNYSSIEGVPYCKPHFEQLFKETGSYNKSFQ 1267
Score = 45.1 bits (92), Expect(4) = 7e-051
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNN 494
+K + F+GT+EKC CSKT YP E+V +N
Sbjct: 1552 SKAARMFSGTQEKCATCSKTAYPLEKVMPHN 1644
>ref|NT_079873.2| Oryza sativa (japonica cultivar-group)
Length = 5116111
Score = 103 bits (219), Expect(4) = 8e-049
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -2 / -2
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEN 344
+V +N + YHKSCF+C HGGCT+SPSN + HEGKLYCK HH QL KGNFS E+
Sbjct: 2840070 QVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVKGNFSNFED 2839903
Score = 76.7 bits (161), Expect(4) = 8e-049
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = -2 / -2
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
A ++ GTT KC +C +TVY V++L AD R+YH+ CFRC HCK TL++
Sbjct: 2842146 AAAWGGTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQV 2842006
Score = 71.6 bits (150), Expect(4) = 8e-049
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2 / -2
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK 617
L+ +NY+S EGVLYC+PH+DQ+ K TGSL+KSFEGT + K
Sbjct: 2841177 LQFSNYSSVEGVLYCKPHYDQILKSTGSLEKSFEGTEEKTK 2841055
Score = 46.4 bits (95), Expect(4) = 8e-049
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 583 KVSSAFAGTREKCVGCSKTVYPTERVTV 500
+ SS F GT++KCV C+KTVYP E+V++
Sbjct: 2840755 RFSSMFVGTQDKCVVCNKTVYPLEKVSI 2840672
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
complete sequence
Length = 112265
Score = 99.1 bits (210), Expect(4) = 2e-048
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -2 / +2
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+VTV YHKSCFKC HGGC ISPSNY A EG LYCKHH QL KEKG+++ L
Sbjct: 14780 QVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL 14941
Score = 73.0 bits (153), Expect(4) = 2e-048
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +3
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL +
Sbjct: 13494 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSV 13634
Score = 63.4 bits (132), Expect(4) = 2e-048
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -2 / +3
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
L+L NY+S EGV YC+PHF+QLFK TGS +KSF+
Sbjct: 14046 LQLGNYSSIEGVPYCKPHFEQLFKETGSYNKSFQ 14147
Score = 45.1 bits (92), Expect(4) = 2e-048
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNN 494
+K + F+GT+EKC CSKT YP E+V +N
Sbjct: 14432 SKAARMFSGTQEKCATCSKTAYPLEKVMPHN 14524
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 103 bits (219), Expect(4) = 4e-048
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -2 / -3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLEN 344
+V +N + YHKSCF+C HGGCT+SPSN + HEGKLYCK HH QL KGNFS E+
Sbjct: 7133428 QVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLFMVKGNFSNFED 7133261
Score = 76.7 bits (161), Expect(4) = 4e-048
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = -2 / -3
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
A ++ GTT KC +C +TVY V++L AD R+YH+ CFRC HCK TL++
Sbjct: 7135504 AAAWGGTTQKCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQV 7135364
Score = 71.6 bits (150), Expect(4) = 4e-048
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2 / -3
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK 617
L+ +NY+S EGVLYC+PH+DQ+ K TGSL+KSFEGT + K
Sbjct: 7134535 LQFSNYSSVEGVLYCKPHYDQILKSTGSLEKSFEGTEEKTK 7134413
Score = 46.4 bits (95), Expect(4) = 4e-048
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 583 KVSSAFAGTREKCVGCSKTVYPTERVTV 500
+ SS F GT++KCV C+KTVYP E+V++
Sbjct: 7134113 RFSSMFVGTQDKCVVCNKTVYPLEKVSI 7134030
>gb|AACV01005009.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005009, whole
genome shotgun sequence
Length = 78753
Score = 84.5 bits (178), Expect(4) = 1e-046
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -2 / +3
Query: 895 GRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANY 722
G A SF GT KC ACDKTV+ +D LTAD YHK CF+C HCKGTL + Y
Sbjct: 76440 GASIRTPAAMSFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSVCIY 76613
Score = 81.3 bits (171), Expect(4) = 1e-046
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2 / +1
Query: 526 VYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+Y ++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL KEKG+++ L
Sbjct: 77515 IYFFVQLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHL 77691
Score = 57.9 bits (120), Expect(4) = 1e-046
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
L++ NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 76699 LQMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 76797
Score = 49.2 bits (101), Expect(4) = 1e-046
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+SSAF+GT++KC C KTVYP E+V
Sbjct: 77049 SKLSSAFSGTQDKCAACQKTVYPLEKV 77129
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_G03
Length = 106401
Score = 84.5 bits (178), Expect(4) = 3e-046
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -2 / -3
Query: 895 GRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANY 722
G A SF GT KC ACDKTV+ +D LTAD YHK CF+C HCKGTL + Y
Sbjct: 6178 GASIRTPAAMSFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSVCIY 6005
Score = 81.3 bits (171), Expect(4) = 3e-046
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2 / -1
Query: 526 VYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+Y ++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL KEKG+++ L
Sbjct: 5103 IYFFVQLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHL 4927
Score = 57.9 bits (120), Expect(4) = 3e-046
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / -1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
L++ NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 5919 LQMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 5821
Score = 49.2 bits (101), Expect(4) = 3e-046
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2 / -3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+SSAF+GT++KC C KTVYP E+V
Sbjct: 5569 SKLSSAFSGTQDKCAACQKTVYPLEKV 5489
>dbj|AP004788.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0408D11, ***
SEQUENCING IN PROGRESS ***
Length = 138934
Score = 84.5 bits (178), Expect(4) = 6e-046
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -2 / +3
Query: 895 GRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANY 722
G A SF GT KC ACDKTV+ +D LTAD YHK CF+C HCKGTL + Y
Sbjct: 77814 GASIRTPAAMSFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSVCIY 77987
Score = 81.3 bits (171), Expect(4) = 6e-046
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2 / +1
Query: 526 VYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+Y ++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL KEKG+++ L
Sbjct: 78889 IYFFVQLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHL 79065
Score = 57.9 bits (120), Expect(4) = 6e-046
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
L++ NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 78073 LQMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 78171
Score = 49.2 bits (101), Expect(4) = 6e-046
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+SSAF+GT++KC C KTVYP E+V
Sbjct: 78423 SKLSSAFSGTQDKCAACQKTVYPLEKV 78503
>gb|AACV01010174.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010174, whole
genome shotgun sequence
Length = 20753
Score = 82.6 bits (174), Expect(4) = 1e-045
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / +3
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNS 716
R ++ SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + N+
Sbjct: 8169 RRQSSLATMSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSVTLNNT 8345
Score = 79.9 bits (168), Expect(4) = 1e-045
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -2 / +3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEK 332
++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL EKG+++ ++ E
Sbjct: 9153 QLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSES 9332
Query: 331 TSQAGSLEEDEQ 296
+ +EQ
Sbjct: 9333 QEVLPEVVPEEQ 9368
Score = 53.3 bits (110), Expect(4) = 1e-045
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / +3
Query: 733 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
+ +Y+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 8445 MCSYSSMDGVLYCKTHFEQLFKETGSFSKKF 8537
Score = 47.8 bits (98), Expect(4) = 1e-045
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+ SAF+GT++KC C KTVYP E+V
Sbjct: 8763 SKICSAFSGTQDKCAACQKTVYPLEKV 8843
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0010C01
Length = 186185
Score = 84.5 bits (178), Expect(4) = 1e-045
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -2 / -1
Query: 895 GRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANY 722
G A SF GT KC ACDKTV+ +D LTAD YHK CF+C HCKGTL + Y
Sbjct: 162248 GASIRTPAAMSFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSVCIY 162075
Score = 81.3 bits (171), Expect(4) = 1e-045
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2 / -2
Query: 526 VYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+Y ++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL KEKG+++ L
Sbjct: 161173 IYFFVQLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHL 160997
Score = 57.9 bits (120), Expect(4) = 1e-045
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / -2
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
L++ NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 161989 LQMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 161891
Score = 49.2 bits (101), Expect(4) = 1e-045
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2 / -1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+SSAF+GT++KC C KTVYP E+V
Sbjct: 161639 SKLSSAFSGTQDKCAACQKTVYPLEKV 161559
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 99.1 bits (210), Expect(4) = 8e-044
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -2 / +3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+VTV YHKSCFKC HGGC ISPSNY A EG LYCKHH QL KEKG+++ L
Sbjct: 115278 QVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL 115439
Score = 73.0 bits (153), Expect(4) = 8e-044
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +1
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL +
Sbjct: 113992 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSV 114132
Score = 63.4 bits (132), Expect(4) = 8e-044
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
L+L NY+S EGV YC+PHF+QLFK TGS +KSF+
Sbjct: 114544 LQLGNYSSIEGVPYCKPHFEQLFKETGSYNKSFQ 114645
Score = 45.1 bits (92), Expect(4) = 8e-044
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNN 494
+K + F+GT+EKC CSKT YP E+V +N
Sbjct: 114930 SKAARMFSGTQEKCATCSKTAYPLEKVMPHN 115022
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24,
complete sequence
Length = 121056
Score = 82.6 bits (174), Expect(4) = 2e-043
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -3
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNS 716
R ++ SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + N+
Sbjct: 35536 RRQSSLATMSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSVTLNNT 35360
Score = 79.9 bits (168), Expect(4) = 2e-043
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -2 / -3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEK 332
++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL EKG+++ ++ E
Sbjct: 34552 QLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSES 34373
Query: 331 TSQAGSLEEDEQ 296
+ +EQ
Sbjct: 34372 QEVLPEVVPEEQ 34337
Score = 53.3 bits (110), Expect(4) = 2e-043
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / -3
Query: 733 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
+ +Y+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 35260 MCSYSSMDGVLYCKTHFEQLFKETGSFSKKF 35168
Score = 47.8 bits (98), Expect(4) = 2e-043
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2 / -3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+ SAF+GT++KC C KTVYP E+V
Sbjct: 34942 SKICSAFSGTQDKCAACQKTVYPLEKV 34862
>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
complete sequence
Length = 140454
Score = 82.6 bits (174), Expect(4) = 3e-043
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -1
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNS 716
R ++ SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + N+
Sbjct: 132864 RRQSSLATMSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSVTLNNT 132688
Score = 79.9 bits (168), Expect(4) = 3e-043
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -2 / -1
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEK 332
++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL EKG+++ ++ E
Sbjct: 131880 QLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSES 131701
Query: 331 TSQAGSLEEDEQ 296
+ +EQ
Sbjct: 131700 QEVLPEVVPEEQ 131665
Score = 53.3 bits (110), Expect(4) = 3e-043
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / -1
Query: 733 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
+ +Y+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 132588 MCSYSSMDGVLYCKTHFEQLFKETGSFSKKF 132496
Score = 47.8 bits (98), Expect(4) = 3e-043
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2 / -1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+ SAF+GT++KC C KTVYP E+V
Sbjct: 132270 SKICSAFSGTQDKCAACQKTVYPLEKV 132190
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 99.1 bits (210), Expect(4) = 2e-042
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -2 / +3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+VTV YHKSCFKC HGGC ISPSNY A EG LYCKHH QL KEKG+++ L
Sbjct: 8727696 QVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL 8727857
Score = 73.0 bits (153), Expect(4) = 2e-042
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +1
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL +
Sbjct: 8726410 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSV 8726550
Score = 63.4 bits (132), Expect(4) = 2e-042
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
L+L NY+S EGV YC+PHF+QLFK TGS +KSF+
Sbjct: 8726962 LQLGNYSSIEGVPYCKPHFEQLFKETGSYNKSFQ 8727063
Score = 45.1 bits (92), Expect(4) = 2e-042
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNN 494
+K + F+GT+EKC CSKT YP E+V +N
Sbjct: 8727348 SKAARMFSGTQEKCATCSKTAYPLEKVMPHN 8727440
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 84.5 bits (178), Expect(4) = 1e-040
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = -2 / -2
Query: 895 GRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANY 722
G A SF GT KC ACDKTV+ +D LTAD YHK CF+C HCKGTL + Y
Sbjct: 924571 GASIRTPAAMSFTGTQDKCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSVCIY 924398
Score = 81.3 bits (171), Expect(4) = 1e-040
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -2 / -3
Query: 526 VYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
+Y ++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL KEKG+++ L
Sbjct: 923496 IYFFVQLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKEKGSYNHL 923320
Score = 57.9 bits (120), Expect(4) = 1e-040
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -2 / -3
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
L++ NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 924312 LQMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 924214
Score = 49.2 bits (101), Expect(4) = 1e-040
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2 / -2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+SSAF+GT++KC C KTVYP E+V
Sbjct: 923962 SKLSSAFSGTQDKCAACQKTVYPLEKV 923882
>gb|CV723028.1|CV723028 root--02-E17.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-E17, mRNA sequence
Length = 482
Score = 132 bits (282), Expect(2) = 5e-040
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = -2 / +3
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCR 692
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL L NY+S EGV YC+
Sbjct: 84 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCK 263
Query: 691 PHFDQLFKRTGSLDKSFEGTPK 626
PHF+QLFK TGS +KSF+ K
Sbjct: 264 PHFEQLFKETGSYNKSFQSPAK 329
Score = 57.4 bits (119), Expect(2) = 5e-040
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKS 476
+K + F+GT+EKC CSKT YP E+VTV YHKS
Sbjct: 372 SKAARMFSGTQEKCATCSKTAYPLEKVTVEGQAYHKS 482
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 82.6 bits (174), Expect(4) = 4e-039
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -3
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNS 716
R ++ SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + N+
Sbjct: 372562 RRQSSLATMSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSVTLNNT 372386
Score = 79.9 bits (168), Expect(4) = 4e-039
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -2 / -3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEK 332
++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL EKG+++ ++ E
Sbjct: 371578 QLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSES 371399
Query: 331 TSQAGSLEEDEQ 296
+ +EQ
Sbjct: 371398 QEVLPEVVPEEQ 371363
Score = 53.3 bits (110), Expect(4) = 4e-039
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / -3
Query: 733 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
+ +Y+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 372286 MCSYSSMDGVLYCKTHFEQLFKETGSFSKKF 372194
Score = 47.8 bits (98), Expect(4) = 4e-039
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2 / -3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+ SAF+GT++KC C KTVYP E+V
Sbjct: 371968 SKICSAFSGTQDKCAACQKTVYPLEKV 371888
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 82.6 bits (174), Expect(4) = 1e-037
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -2
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNS 716
R ++ SF GT KCTACDKTV+ +D LTAD YHK CF+C HCKG L + N+
Sbjct: 4427762 RRQSSLATMSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSVTLNNT 4427586
Score = 79.9 bits (168), Expect(4) = 1e-037
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -2 / -2
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEK 332
++T+ YHKSCFKC HGGC ++ S+Y A G LYCK H QL EKG+++ ++ E
Sbjct: 4426778 QLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSES 4426599
Query: 331 TSQAGSLEEDEQ 296
+ +EQ
Sbjct: 4426598 QEVLPEVVPEEQ 4426563
Score = 53.3 bits (110), Expect(4) = 1e-037
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / -2
Query: 733 LANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
+ +Y+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 4427486 MCSYSSMDGVLYCKTHFEQLFKETGSFSKKF 4427394
Score = 47.8 bits (98), Expect(4) = 1e-037
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2 / -2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERV 506
+K+ SAF+GT++KC C KTVYP E+V
Sbjct: 4427168 SKICSAFSGTQDKCAACQKTVYPLEKV 4427088
>gb|AACV01021892.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021892, whole
genome shotgun sequence
Length = 87744
Score = 82.2 bits (173), Expect(3) = 3e-035
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / -2
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL +
Sbjct: 51452 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSV 51318
Score = 74.8 bits (157), Expect(3) = 3e-035
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = -2 / -3
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
++T+ YH++CFKC HGGC ++ ++Y +H G LYC++H QL K+ G++ L
Sbjct: 50392 QMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKKSGSYDNL 50231
Score = 52.4 bits (108), Expect(3) = 3e-035
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -2 / -3
Query: 736 KLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
++ +Y+S +GVLYC+ HF+QLFK TG+ K+F
Sbjct: 51205 QMCSYSSMDGVLYCKTHFEQLFKETGTFKKNF 51110
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete
sequence
Length = 130058
Score = 82.2 bits (173), Expect(3) = 6e-035
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / -3
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL +
Sbjct: 45024 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSV 44890
Score = 74.8 bits (157), Expect(3) = 6e-035
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = -2 / -1
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
++T+ YH++CFKC HGGC ++ ++Y +H G LYC++H QL K+ G++ L
Sbjct: 43964 QMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKKSGSYDNL 43803
Score = 52.4 bits (108), Expect(3) = 6e-035
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 736 KLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
++ +Y+S +GVLYC+ HF+QLFK TG+ K+F
Sbjct: 44777 QMCSYSSMDGVLYCKTHFEQLFKETGTFKKNF 44682
>gb|CF323532.1|CF323532 HDN--04-B15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-B15, mRNA sequence
Length = 512
Score = 132 bits (282), Expect(2) = 2e-034
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = -2 / +1
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCR 692
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL L NY+S EGV YC+
Sbjct: 154 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCK 333
Query: 691 PHFDQLFKRTGSLDKSFEGTPK 626
PHF+QLFK TGS +KSF+ K
Sbjct: 334 PHFEQLFKETGSYNKSFQSPAK 399
Score = 38.6 bits (78), Expect(2) = 2e-034
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYP 518
+K + F+GT+EKC CSKT YP
Sbjct: 442 SKAARMFSGTQEKCATCSKTAYP 510
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 82.2 bits (173), Expect(3) = 6e-032
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / -3
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL +
Sbjct: 605540 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSV 605406
Score = 74.8 bits (157), Expect(3) = 6e-032
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = -2 / -1
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
++T+ YH++CFKC HGGC ++ ++Y +H G LYC++H QL K+ G++ L
Sbjct: 604480 QMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKKSGSYDNL 604319
Score = 52.4 bits (108), Expect(3) = 6e-032
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 736 KLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
++ +Y+S +GVLYC+ HF+QLFK TG+ K+F
Sbjct: 605293 QMCSYSSMDGVLYCKTHFEQLFKETGTFKKNF 605198
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 82.2 bits (173), Expect(3) = 3e-031
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = -2 / -3
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
+F GT KC ACDKTV+ +D LTAD+ YHK+CFRC HCKGTL +
Sbjct: 6719804 TFSGTQDKCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSV 6719670
Score = 74.8 bits (157), Expect(3) = 3e-031
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = -2 / -1
Query: 511 RVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
++T+ YH++CFKC HGGC ++ ++Y +H G LYC++H QL K+ G++ L
Sbjct: 6718744 QMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKKSGSYDNL 6718583
Score = 52.4 bits (108), Expect(3) = 3e-031
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = -2 / -1
Query: 736 KLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
++ +Y+S +GVLYC+ HF+QLFK TG+ K+F
Sbjct: 6719557 QMCSYSSMDGVLYCKTHFEQLFKETGTFKKNF 6719462
>gb|AU065317.1|AU065317 AU065317 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61601_1A, mRNA sequence
Length = 485
Score = 129 bits (277), Expect = 4e-028
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = -2 / +1
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCR 692
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL L NY+S EGV YC+
Sbjct: 181 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCK 360
Query: 691 PHFDQLFKRTGSLDKSF 641
PHF+QLFK TGS +KSF
Sbjct: 361 PHFEQLFKETGSYNKSF 411
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
complete sequence
Length = 115270
Score = 73.0 bits (153), Expect(3) = 8e-027
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / +1
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKL 731
AT F GT KC C KTVY +D+L+ D ++H++CF+C HCK TL +
Sbjct: 113992 ATMFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSV 114132
Score = 63.4 bits (132), Expect(3) = 8e-027
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -2 / +1
Query: 739 LKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
L+L NY+S EGV YC+PHF+QLFK TGS +KSF+
Sbjct: 114544 LQLGNYSSIEGVPYCKPHFEQLFKETGSYNKSFQ 114645
Score = 45.1 bits (92), Expect(3) = 8e-027
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNN 494
+K + F+GT+EKC CSKT YP E+V +N
Sbjct: 114930 SKAARMFSGTQEKCATCSKTAYPLEKVMPHN 115022
>gb|AU029821.1|AU029821 AU029821 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40588_1A, mRNA sequence
Length = 461
Score = 113 bits (241), Expect = 4e-023
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2 / +2
Query: 577 SSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK 398
SS F GT++KC C KTVYP E++T+ YH++CFKC HGGC ++ ++Y +H G LYC+
Sbjct: 2 SSVFCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQ 181
Query: 397 HHHIQLIKEKGNFSQL 350
+H QL K+ G++ L
Sbjct: 182 NHFWQLFKKSGSYDNL 229
>gb|AU165380.1|AU165380 AU165380 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0743, mRNA sequence
Length = 421
Score = 113 bits (241), Expect = 4e-023
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = -2 / +2
Query: 577 SSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK 398
SS F GT++KC C KTVYP E++T+ YH++CFKC HGGC ++ ++Y +H G LYC+
Sbjct: 2 SSVFCGTQDKCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQ 181
Query: 397 HHHIQLIKEKGNFSQL 350
+H QL K+ G++ L
Sbjct: 182 NHFWQLFKKSGSYDNL 229
>gb|AU030413.1|AU030413 AU030413 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E51032_1A, mRNA sequence
Length = 399
Score = 90.0 bits (190), Expect(2) = 2e-022
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -2 / +1
Query: 787 RIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKS 644
R++H++CF+C HCK TL L N +S EGV YC+PHF+QLFK TGS +KS
Sbjct: 187 RVFHRSCFKCQHCKSTLSLGNXSSIEGVPYCKPHFEQLFKETGSYNKS 330
Score = 40.0 bits (81), Expect(2) = 2e-022
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2 / +2
Query: 871 ATSFQGTTTKCTACDKTVYLVDKLTAD 791
AT F GT KC C KTVY +D+L+ D
Sbjct: 104 ATMFSGTQQKCKVCTKTVYPMDQLSTD 184
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,146,032,133
Number of Sequences: 438736
Number of extensions: 93346489
Number of successful extensions: 433911
Number of sequences better than 1.0e-020: 69
length of database: 933,473,305
effective HSP length: 60
effective length of database: 907,149,145
effective search space used: 232230181120
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)