TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521825.2.1
(2812 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF064561.1|AF064561 Hordeum vulgare cultivar Bomi starch... 248 0.0
gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch... 261 0.0
gb|BM441900.2|BM441900 EBed07_SQ001_N21_R endosperm, 28 DPA... 533 e-150
gb|AW983497.2|AW983497 HVSMEg0010N11f Hordeum vulgare pre-a... 518 e-146
gb|BU968566.1|BU968566 HB07O20r BC Hordeum vulgare subsp. v... 431 e-120
gb|BU970604.1|BU970604 HB15C08r BC Hordeum vulgare subsp. v... 430 e-119
gb|BU969855.1|BU969855 HB12M24r BC Hordeum vulgare subsp. v... 407 e-112
gb|BM441607.2|BM441607 EBed07_SQ001_A14_R endosperm, 28 DPA... 403 e-111
gb|BU968118.1|BU968118 HB06H16r BC Hordeum vulgare subsp. v... 402 e-111
gb|BU971976.1|BU971976 HB20D20r BC Hordeum vulgare subsp. v... 398 e-110
gb|BG416474.1|BG416474 HVSMEk0012G24f Hordeum vulgare testa... 366 e-108
gb|BG366769.1|BG366769 HVSMEi0008D20f Hordeum vulgare 20 DA... 386 e-106
gb|BQ472324.1|BQ472324 HB09O20T BC Hordeum vulgare subsp. v... 384 e-105
gb|BE602527.2|BE602527 HVSMEh0099J22f Hordeum vulgare 5-45 ... 185 8e-098
gb|BU969303.1|BU969303 HB11C06r BC Hordeum vulgare subsp. v... 356 3e-097
gb|BU984253.1|BU984253 HF03G17r HF Hordeum vulgare subsp. v... 356 3e-097
gb|BG367041.1|BG367041 HVSMEi0009O06f Hordeum vulgare 20 DA... 329 6e-093
gb|BE195628.2|BE195628 HVSMEh0089P20f Hordeum vulgare 5-45 ... 196 5e-089
gb|CA022075.1|CA022075 HZ42B15r HZ Hordeum vulgare subsp. v... 196 6e-089
gb|BU966674.1|BU966674 HB02A08r BC Hordeum vulgare subsp. v... 297 1e-079
gb|BU975349.1|BU975349 HB30O07r BC Hordeum vulgare subsp. v... 215 2e-078
gb|BG415291.2|BG415291 HVSMEk0005O03f Hordeum vulgare testa... 286 4e-076
gb|BG368110.1|BG368110 HVSMEi0015L13f Hordeum vulgare 20 DA... 274 6e-073
gb|BQ472575.1|BQ472575 HB09C02T BC Hordeum vulgare subsp. v... 264 1e-070
gb|BU986318.1|BU986318 HF11G13r HF Hordeum vulgare subsp. v... 262 6e-070
gb|BF065047.1|BF065047 HV_CEb0022L05f Hordeum vulgare seedl... 151 6e-069
gb|BU967331.1|BU967331 HB03P08r BC Hordeum vulgare subsp. v... 261 2e-068
gb|BU968310.1|BU968310 HB07C02r BC Hordeum vulgare subsp. v... 259 8e-068
gb|BU967173.1|BU967173 HB03H24r BC Hordeum vulgare subsp. v... 236 4e-065
gb|BU986646.1|BU986646 HF12I02r HF Hordeum vulgare subsp. v... 235 3e-062
gb|BG366114.1|BG366114 HVSMEi0005M22f Hordeum vulgare 20 DA... 235 6e-062
gb|AV914376.1|AV914376 AV914376 K. Sato unpublished cDNA li... 169 2e-056
gb|BU970967.1|BU970967 HB16D15r BC Hordeum vulgare subsp. v... 218 1e-055
gb|BU972445.1|BU972445 HB21K16r BC Hordeum vulgare subsp. v... 213 5e-054
gb|BU966891.1|BU966891 HB02K24r BC Hordeum vulgare subsp. v... 138 6e-049
gb|BE196055.1|BE196055 HVSMEh0091D22f Hordeum vulgare 5-45 ... 105 4e-046
gb|BE196057.2|BE196057 HVSMEh0091D24f Hordeum vulgare 5-45 ... 101 8e-045
gb|BI948738.1|BI948738 HVSMEl0010K17f Hordeum vulgare spike... 102 4e-043
gb|CV060106.1|CV060106 BNEL54e11 Barley EST endosperm libra... 151 2e-042
gb|CA030569.1|CA030569 HX07H03r HX Hordeum vulgare subsp. v... 151 6e-042
gb|AV913706.1|AV913706 AV913706 K. Sato unpublished cDNA li... 97 2e-041
gb|CB881353.1|CB881353 HM09I19w HM Hordeum vulgare subsp. v... 147 4e-041
gb|BU995206.1|BU995206 HM09I19r HM Hordeum vulgare subsp. v... 147 2e-040
gb|CV059272.1|CV059272 BNEL46c8 Barley EST endosperm librar... 166 8e-040
gb|BU996927.1|BU996927 HI06F01r HI Hordeum vulgare subsp. v... 98 7e-037
gb|BU994498.1|BU994498 HM07E08r HM Hordeum vulgare subsp. v... 131 8e-036
gb|BG366889.2|BG366889 HVSMEi0008N13f Hordeum vulgare 20 DA... 149 1e-035
gb|BQ755138.1|BQ755138 EBed02_SQ003_N09_R endosperm, 8 DPA,... 151 2e-035
gb|CB880027.1|CB880027 HM05E08w HM Hordeum vulgare subsp. v... 124 5e-035
gb|AV921312.1|AV921312 AV921312 K. Sato unpublished cDNA li... 145 9e-034
gb|BU985282.1|BU985282 HF06K19r HF Hordeum vulgare subsp. v... 143 4e-033
gb|BU984434.1|BU984434 HF03O17r HF Hordeum vulgare subsp. v... 94 2e-032
gb|AW982901.3|AW982901 HVSMEg0004I06f Hordeum vulgare pre-a... 136 3e-032
gb|BI951191.1|BI951191 HVSMEl0024O17f Hordeum vulgare spike... 138 1e-031
gb|CV060003.1|CV060003 BNEL53d1 Barley EST endosperm librar... 114 2e-031
gb|BU969620.1|BU969620 HB12B01r BC Hordeum vulgare subsp. v... 116 3e-026
gb|BI948391.1|BI948391 HVSMEl0009F19f Hordeum vulgare spike... 117 2e-025
gb|BM443964.2|BM443964 EBem09_SQ002_F04_R embryo, 1 Day ger... 90 9e-025
gb|BQ755653.1|BQ755653 EBed07_SQ003_P03_R endosperm, 28 DPA... 101 6e-022
gb|CA029212.1|CA029212 HZ64I18r HZ Hordeum vulgare subsp. v... 106 7e-022
gb|CV060196.1|CV060196 BNEL55e10 Barley EST endosperm libra... 105 9e-022
>gb|AF064561.1|AF064561 Hordeum vulgare cultivar Bomi starch branching enzyme IIb (sbeIIb)
mRNA, nuclear gene encoding plastid protein, complete cds
Length = 2780
Score = 248 bits (536), Expect(3) = 9e-083
Identities = 96/163 (58%), Positives = 118/163 (72%)
Frame = -2 / +1
Query: 1758 SNNVTDGLNGYDVGQSTQESYFHAGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWLDEF 1579
S+ ++ L+G + T YFH G RG+H +WDSR+FNY N EV+RFLLSN R+WL+E+
Sbjct: 1234 SHASSNTLDGLNGFDGTDTHYFHGGSRGHHWMWDSRVFNYGNKEVIRFLLSNARWWLEEY 1413
Query: 1578 MFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDAVVYMMLANHLMHKLLPEATV 1399
FDGFRFDG TSM+Y HHG+ V FTG+Y EYF T VDAVVY+ML N L+H L PEA
Sbjct: 1414 KFDGFRFDGATSMMYTHHGLQVTFTGSYHEYFGFATDVDAVVYLMLVNDLIHALYPEAVT 1593
Query: 1398 VAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDD 1270
+ EDVSGMP PV GGVGFDYRL MA+ D+WI+ LK D+
Sbjct: 1594 IGEDVSGMPTFALPVQVGGVGFDYRLHMAVADKWIELLKGSDE 1722
Score = 236 bits (510), Expect(7) = 0.0
Identities = 89/135 (65%), Positives = 108/135 (80%)
Frame = -2 / +1
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRA 1948
PY+G+++DPP E+Y FKHP+P +P + RIYE HVGMS +P ++TY F D VLPRI+
Sbjct: 874 PYNGIYYDPPEEEKYVFKHPQPKRPKSLRIYETHVGMSSPEPKINTYANFRDEVLPRIKR 1053
Query: 1947 NNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVH 1768
YN VQ+MA+ EHSYY SFGYHVTNFFA SSR G+PEDLK L+D+AH LGL VLMDVVH
Sbjct: 1054 LGYNAVQIMAIQEHSYYGSFGYHVTNFFAPSSRFGSPEDLKSLIDRAHELGLLVLMDVVH 1233
Query: 1767 SHASNNVTDGLNGYD 1723
SHAS+N DGLNG+D
Sbjct: 1234 SHASSNTLDGLNGFD 1278
Score = 194 bits (419), Expect(7) = 0.0
Identities = 76/102 (74%), Positives = 85/102 (83%)
Frame = -2 / +1
Query: 1272 DSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASP 1093
D W MG I HTLTNRR+ EKC+ YAESHDQ++VGDKTIAF LMDK+MY M+ P++P
Sbjct: 1717 DEGWEMGNIVHTLTNRRWLEKCVTYAESHDQALVGDKTIAFWLMDKDMYDFMALNGPSTP 1896
Query: 1092 TIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
IDRGIAL KMI ITMALGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 1897 NIDRGIALHKMIRLITMALGGEGYLNFMGNEFGHPEWIDFPR 2022
Score = 147 bits (316), Expect(5) = e-127
Identities = 72/120 (60%), Positives = 83/120 (69%)
Frame = +2 / -1
Query: 1271 SSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASIM 1450
SSL R SIHLS AI +R*S PTPP+ TGR G+P TSS ASG S I+ F SI
Sbjct: 1721 SSLPLRSSIHLSATAICKR*SKPTPPT*TGRANVGIPLTSSPIVTASG*SA*IRSFTSIK 1542
Query: 1451 *TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNTS 1630
*TTAST+V+K KYSW* PV T PW Y ++V PSNRKPSN+ SS+ +L LE RNL TS
Sbjct: 1541 *TTASTSVAKPKYSW*LPVKVTCNPWWVYIMEVAPSNRKPSNLYSSSHHLALESRNLITS 1362
Score = 147 bits (315), Expect(7) = 0.0
Identities = 60/100 (60%), Positives = 75/100 (75%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D + LRY M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 2059 GNNNSYDKCRRRFDLGDAEFLRYHGMQQFDQAMQHLEEKYGFMTSDHQYVSRKHEEDKVI 2238
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDA 664
VFE+GDLVFVFNFH +Y Y+VGC PGKY+V LDSDA
Sbjct: 2239 VFEKGDLVFVFNFHWSNSYFDYRVGCLKPGKYKVVLDSDA 2358
Score = 125 bits (268), Expect(5) = e-127
Identities = 69/126 (54%), Positives = 75/126 (59%)
Frame = +2 / -1
Query: 1730 PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRSSGVPDLLLTAKKFVTWYPKEA*YEC 1909
PFKPS LL A L TTSIRT KP ALS + +SSG P LL AKK VTWYPK *YEC
Sbjct: 1271 PFKPSKVLLDA*L*TTSIRTSKPSS*ALSIKDFKSSGDPKRLLGAKKLVTWYPKLP*YEC 1092
Query: 1910 SITAIN*TVL*LFARMRGNTLSANSLYVLTAGFSPLIPTWAS*IRGAAGFEGRGCLNVYL 2089
S AI *T L + G+T S YVL G L+PT S IR G G GCLN Y
Sbjct: 1091 SWIAII*TALYPSLLILGSTSSLKFAYVLIFGSGLLMPTCVSYIRNDFGRLG*GCLNTYF 912
Query: 2090 SEAGGS 2107
S +GGS
Sbjct: 911 SSSGGS 894
Score = 111 bits (236), Expect(7) = 0.0
Identities = 41/93 (44%), Positives = 56/93 (60%)
Frame = -2 / +1
Query: 2547 IYDLDPKLEIFKDHFRYRMKRFLEQKGSIEENEGSLESFSKGYLKFGINTNEDGTVYREW 2368
IYD+DP L FK H YR + + I+E +G ++ FS+GY KFG + +G YREW
Sbjct: 457 IYDIDPMLRDFKYHLEYRYSLYRRIRSDIDEYDGGMDVFSRGYEKFGFVRSAEGITYREW 636
Query: 2367 APAAQEAELIGDFNDWNGANHKMEKDKFGVWSI 2269
AP A A L+GDFN+W+ M K+ G+W I
Sbjct: 637 APGADSAALVGDFNNWDPTADHMSKNDLGIWEI 735
Score = 107 bits (228), Expect(5) = e-127
Identities = 58/116 (50%), Positives = 66/116 (56%)
Frame = +2 / -1
Query: 641 LPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTI 820
LP PPK+ ASES TLYFPG PT * *+ L WKL T TKSP S TIT SSS T
Sbjct: 2381 LPNPPKSPASESNTTLYFPGFKQPTR*SK*LLLQWKLNTNTKSPFSNTITLSSSCFRDTY 2202
Query: 821 CFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHS 988
+ D K SS IA SN + Y + S S R + R HLS*L LFP + + S
Sbjct: 2201 WWSDVIKPYFSSRCCIA*SNCCIP*YLRNSASPRSNLRRHLS*LLLFPGMNLPVGS 2034
Score = 103 bits (219), Expect(5) = e-127
Identities = 42/99 (42%), Positives = 59/99 (59%)
Frame = +1 / -3
Query: 967 SWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQ 1146
SWKV PF + +LISHK+++ ++S HCD+ NH ++C +IN R R H +H LVHQ
Sbjct: 2022 SWKVYPFRMPELISHKVKITLSS*SHCDKSNHFMQCYSAINIRCRRSVQSHEIIHILVHQ 1843
Query: 1147 EKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRP 1263
+CNS V+N LIM SI + F + + TH P
Sbjct: 1842 PECNSLVSNKCLIMTFSISNTLFQPPSIC*CVHNITHLP 1726
Score = 99.6 bits (211), Expect(4) = 4e-063
Identities = 52/141 (36%), Positives = 84/141 (59%)
Frame = +1 / -3
Query: 1294 NPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKHHVNNCIHSC 1473
NP I + H AIVK NPT +N K RH+ NIF+N++ F + V+*++ +H VNNCI+
Sbjct: 1698 NPFIGNGHM*AIVKTNPTNLNRKGKCRHSTNIFTNSNGFRIKRVN*IIHQHQVNNCIYIR 1519
Query: 1474 VQTEIFLVVSSKPHIDTMVMIQH*CNSIKSEAIKHEFIQPISQVRKKKP*YLPVSIVEQP 1653
+ +IF+V K ++ +MV I H +++SE I+ F+ P S + K KP + +VE
Sbjct: 1518 GKAKIFMVAPCKGYL*SMVGIHHGGRAVESETIELIFL*PPSCIGK*KPYNFLIPVVEHT 1339
Query: 1654 TIPKFMITSISRMKIGLLGAL 1716
IP ++ + MK+ + A+
Sbjct: 1338 RIPHPVMAP*AAMKVMCIRAI 1276
Score = 88.1 bits (186), Expect(4) = 4e-063
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +1 / -3
Query: 1771 DNIHQNSQTQTVCLINKIFEVLWCA*SAANRKEICHMVPERSIVRMLHNCHQLNCVVVIC 1950
+NIHQ+ QT+ V IN+ F + W +A KEI +MVP+ SIV ML +CH LNC+V
Sbjct: 1230 NNIHQDKQTKLVSSINQGF*IFWGPKTATWCKEIGNMVPKASIV*MLLDCHYLNCIVSKS 1051
Query: 1951 SYAWQHIVCKFPICAYCWLFTTHTYMGFI 2037
+W+H++ + IC W TH M FI
Sbjct: 1050 FNSWKHLISEVCICVDLWFRATHANMCFI 964
Score = 85.4 bits (180), Expect(4) = 4e-063
Identities = 46/79 (58%), Positives = 51/79 (64%)
Frame = +2 / -1
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
+AIV+ II SAIPRSI+G G M YISLSI +NAIVLSPT *S LSA HFS
Sbjct: 1952 KAIVISLIILCSAIPRSILGVEGPFRAMKSYISLSINQNAIVLSPTSA*S*LSA*VTHFS 1773
Query: 1217 VYLLLVKVCAISPIDHSES 1273
+LL V VC I PI S
Sbjct: 1772 NHLLFVSVCTILPISQPSS 1716
Score = 76.2 bits (160), Expect(7) = 0.0
Identities = 52/131 (39%), Positives = 68/131 (51%)
Frame = -1 / +3
Query: 1663 LG*SAVQLC*LGGIKVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWYQCGVYWKLPGIF 1484
+G S VQL G KVS+F +++ I V W PI ++ V PW +Y +LP IF
Sbjct: 1329 VGFSCVQLRE*GSYKVSTFQCKMVARGI*VRWFPIRRRDLHDVYPPWITSNLYRELP*IF 1508
Query: 1483 QFGHSCGCSCLHDACKPFNAQTLARSNCCC*RCFRHAGPLPAS**RWGWV*LSPGNGYP* 1304
H C CSCL DA + N++ L+ S *RC +A P+ WGW *LS G
Sbjct: 1509 WLCHGCRCSCLLDAGE*SNSRALS*SRYYW*RC*WNAYICPSCSSWWGWF*LSLTYGRCR 1688
Query: 1303 *MD*LPEE*R* 1271
*MD* + R*
Sbjct: 1689 *MD*TSQRKR* 1721
Score = 74.8 bits (157), Expect(3) = 3e-038
Identities = 54/134 (40%), Positives = 62/134 (46%)
Frame = -3 / +2
Query: 1694 FMREIEVIINFGIVGCSTMLTGRY*GFFFLT*DIGWMNSCLMASDLMELHQCCIITMVSM 1515
FM I GI+ CST + *GF+F D G N M SD CI TM
Sbjct: 1298 FMAAHGAITGCGILVCSTTGIRKL*GFYFPMQDGG*RNISSMVSDSTARPP*CIPTMDYK 1477
Query: 1514 WGLLETTRNISVWTQLWMQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLG 1335
L T NI ++ MQLFT*C I* T K LLL+KM C VGL
Sbjct: 1478 *PLQGATMNILALPRM*MQLFT*CW*MI*FTRFILKPLLLVKMLVECLHLPFLFKLVGLV 1657
Query: 1334 LTIAWQWLSLIDGL 1293
LTIA+ W I+GL
Sbjct: 1658 LTIAYIWPLPINGL 1699
Score = 71.6 bits (150), Expect(5) = e-127
Identities = 38/93 (40%), Positives = 47/93 (50%)
Frame = +2 / -1
Query: 2270 IDQTPNLSFSILWFAPFQSLKSPISSASCAAGAHSRYTVPSSFVLIPNFK*PLEKDSRLP 2449
I Q P I Q LKSP ++A A GAHSR +PS+ PNF *P E S P
Sbjct: 734 ISQIPKSFLLIWSAVGSQLLKSPTNAAESAPGAHSR*VIPSALRTNPNFS*PRENTSMPP 555
Query: 2450 SFSSIDPFCSRNLFIRYLKWSLNISSLGSRSYM 2548
S+SS+ RY +W L S+GS SY+
Sbjct: 554 SYSSMSERILLYRLYRYSRWYLKSRSIGSMSYI 456
Score = 70.7 bits (148), Expect(3) = 9e-083
Identities = 44/98 (44%), Positives = 57/98 (58%)
Frame = -1 / +3
Query: 1258 DG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDGQGNVHWHVRLAACFTYN*SR 1079
DG* A+ + ++ K+ +C*+ *S CWRQ+YCI DGQG V +H T *SR
Sbjct: 1731 DG*YCAHTNK*KVVGKVCYLC*KS*SSTCWRQDYCILVDGQGYV*FHGSERTFDT*Y*SR 1910
Query: 1078 DCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD*LSKR 965
+ T +D +HNG R L YGK*V + MD LSKR
Sbjct: 1911 NSTA*ND*TYHNGFRRRGLS*LYGK*VRAS*MDRLSKR 2024
Score = 68.0 bits (142), Expect(3) = 3e-038
Identities = 38/83 (45%), Positives = 44/83 (53%)
Frame = -3 / +2
Query: 1214 KNASHMLRAMISLLLATKLLHFS*WTRKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWPL 1035
K+ ML+ MI LL T+LLH *WTR C ++ L HL LI H +* SQW
Sbjct: 1775 KSVLLMLKVMIKHLLETRLLHSG*WTRICMISWL*TDLRHLILIAE*HCIK*LDLSQWL* 1954
Query: 1034 EVMAT*ILWEMSLVTQNGLTFQE 966
E LWEMS NG TFQE
Sbjct: 1955 EERVILTLWEMSSGILNG*TFQE 2023
Score = 56.1 bits (116), Expect(3) = 3e-038
Identities = 34/90 (37%), Positives = 42/90 (46%)
Frame = -3 / +2
Query: 1991 HIGNLQTMCCHAYEQITTTQFS*WQLWSIRTMLLSGTM*QISLRLAADQAHQRTSNILLI 1812
H+ + C + + T QF *WQ SI TM GTM ISL A Q+ N LI
Sbjct: 1010 HMQTSEMRCFQELKDLDTMQFK*WQSKSIHTMEALGTMLPISLHQVAVLGPQKI*NP*LI 1189
Query: 1811 RHTVWVCEF*WMLSIAMQVIMSQMV*MAMM 1722
T VC *WML ++ V*M +M
Sbjct: 1190 ELTSLVCLS*WMLFTVTHQVIPWTV*MVLM 1279
Score = 43.7 bits (89), Expect(4) = 4e-063
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1 / -3
Query: 2275 PNTKFILLHLMVCTIPVIEVTNKLCLLRSRCPFTIYSSILICINPKFQIAFRK 2433
PNT+ I H++ IP++EV N C + SR PF++ + K +A K
Sbjct: 729 PNTQVIFAHMVCSWIPIVEVAN*CCRICSRSPFSVSDTFSAANKSKLLVAAGK 571
Score = 35.0 bits (70), Expect(7) = 0.0
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 573 NNRPNSFKVLSPPRTCVAY 517
+NRP+SF V +P RTCV Y
Sbjct: 2425 DNRPHSFSVYTPSRTCVVY 2481
Score = 34.1 bits (68), Expect(7) = 0.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / +1
Query: 2262 DHVKGKPAIPHNSKVKFRFLHGGVWVDRIPALIRYA 2155
++ G P IPH S+VK R D IPA I+Y+
Sbjct: 745 NNADGSPPIPHGSRVKVRMDTPSGTKDSIPAWIKYS 852
Score = 29.5 bits (58), Expect(3) = 9e-083
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 1942 LQHSSVDGSYGAFVLCFFRVPCDKFLC 1862
+Q SS +G+ AF+L VPC +FLC
Sbjct: 1059 IQCSSNNGNPRAFILWKLWVPCYQFLC 1139
>gb|AF064560.1|AF064560 Hordeum vulgare cultivar Bomi starch branching enzyme IIa (sbeIIa)
mRNA, nuclear gene encoding plastid protein, complete cds
Length = 2554
Score = 261 bits (564), Expect(3) = 1e-084
Identities = 100/164 (60%), Positives = 123/164 (75%)
Frame = -2 / +1
Query: 1758 SNNVTDGLNGYDVGQSTQESYFHAGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWLDEF 1579
S++ + L+G + T YFH G RG+H +WDSRLFNY +WEVLRFLLSN R+WL+E+
Sbjct: 949 SHSSNNTLDGLNGFDGTDTHYFHGGPRGHHWMWDSRLFNYGSWEVLRFLLSNARWWLEEY 1128
Query: 1578 MFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDAVVYMMLANHLMHKLLPEATV 1399
FDGFRFDGVTSM+Y HHG+ + FTGNY EYF T VDAVVY+ML N L+H L P+A
Sbjct: 1129 KFDGFRFDGVTSMMYTHHGLQMTFTGNYGEYFGFATDVDAVVYLMLVNDLIHGLYPDAVS 1308
Query: 1398 VAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDS 1267
+ EDVSGMP C PV +GGVGFDYRL MA+ D+WI+ LK D+S
Sbjct: 1309 IGEDVSGMPTFCIPVPDGGVGFDYRLHMAVADKWIELLKQSDES 1440
Score = 235 bits (507), Expect(6) = 0.0
Identities = 86/135 (63%), Positives = 110/135 (81%)
Frame = -2 / +1
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRA 1948
P++G+++DPP E+Y F+HP+P +P + RIYE+H+GMS +P +++Y F D VLPRI+
Sbjct: 589 PFNGIYYDPPEEEKYVFQHPQPKRPESLRIYESHIGMSSPEPKINSYANFRDEVLPRIKR 768
Query: 1947 NNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVH 1768
YN VQ+MA+ EHSYYASFGYHVTNFFA SSR GTPEDLK L+D+AH LGL VLMD+VH
Sbjct: 769 LGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVH 948
Query: 1767 SHASNNVTDGLNGYD 1723
SH+SNN DGLNG+D
Sbjct: 949 SHSSNNTLDGLNGFD 993
Score = 196 bits (422), Expect(6) = 0.0
Identities = 75/107 (70%), Positives = 88/107 (82%)
Frame = -2 / +1
Query: 1287 LKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDL 1108
L + D W MG+I HTLTNRR+ EKC+ YAESHDQ++VGDKTIAF LMDK+MY M+
Sbjct: 1417 LLKQSDESWKMGDIVHTLTNRRWLEKCVTYAESHDQALVGDKTIAFWLMDKDMYDFMALD 1596
Query: 1107 QPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
+P++P IDRGIAL KMI +TM LGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 1597 RPSTPRIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPR 1737
Score = 150 bits (323), Expect(6) = 0.0
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 1774 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVI 1953
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
+FERGDLVFVFNFH + + Y+VGC PGKY+VALDSD
Sbjct: 1954 IFERGDLVFVFNFHWSNSKKDYRVGCSKPGKYKVALDSD 2070
Score = 149 bits (320), Expect(5) = e-117
Identities = 73/123 (59%), Positives = 85/123 (69%)
Frame = +2 / -3
Query: 1268 ESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASI 1447
+SSL R SIHLS AI RR*S PTPPS TG Q G+P TSS ASG S I+ SI
Sbjct: 1439 DSSLCLRSSIHLSATAICRR*SKPTPPSGTGMQNVGIPLTSSPMDTASG*SP*IRSLTSI 1260
Query: 1448 M*TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNT 1627
*TTAST+V+ KYS *FPVN PW* Y ++VTPSNR PSN+ SS+ +L + +NLNT
Sbjct: 1259 K*TTASTSVANPKYSP*FPVNVICNPW*VYIMEVTPSNRNPSNLYSSSHHLAFDSKNLNT 1080
Query: 1628 SQL 1636
SQL
Sbjct: 1079 SQL 1071
Score = 115 bits (245), Expect(6) = 0.0
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = -2 / +1
Query: 2559 DHLPIYDLDPKLEIFKDHFRYRMKRFLEQKGSIEENEGSLESFSKGYLKFGINTNEDGTV 2380
D IY++DP L+ F+ H YR + + +I+++EG LE FS+GY K G + G
Sbjct: 160 DGQKIYEIDPTLKDFRSHLDYRYSEYKRIRAAIDQHEGGLEVFSRGYEKLGFTRSAKGIT 339
Query: 2379 YREWAPAAQEAELIGDFNDWNGANHKMEKDKFGVWSI 2269
YREWAP A A L+GDFN+WN M +D +GVW I
Sbjct: 340 YREWAPGAHSAALVGDFNNWNPNADTMTRDDYGVWEI 450
Score = 113 bits (241), Expect(5) = e-117
Identities = 63/126 (50%), Positives = 69/126 (54%)
Frame = +2 / -3
Query: 1730 PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRSSGVPDLLLTAKKFVTWYPKEA*YEC 1909
PFKPS L L T SIRT KP CALS + +SSGVP LL AKK VTWYPK A*YEC
Sbjct: 986 PFKPSRVLFDE*L*TISIRTSKPSSCALSIKDFKSSGVPKRLLGAKKLVTWYPKLA*YEC 807
Query: 1910 SITAIN*TVL*LFARMRGNTLSANSLYVLTAGFSPLIPTWAS*IRGAAGFEGRGCLNVYL 2089
S AI T L + G+T S Y G LIP S I +G G GC Y
Sbjct: 806 SWIAIICTALYPSLLILGSTSSLKLAYEFIFGSGLLIPMCDSYILSDSGRLG*GCWKTYF 627
Query: 2090 SEAGGS 2107
S +GGS
Sbjct: 626 SSSGGS 609
Score = 112 bits (240), Expect(5) = e-117
Identities = 62/117 (52%), Positives = 71/117 (60%)
Frame = +2 / -3
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT TKSP SK IT
Sbjct: 2123 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SFLLLLQWKLKTNTKSPLSKMITL 1944
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SSS T D SS IA SN+ + Y + S S R + R HLS*L LFP
Sbjct: 1943 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLFP 1773
Score = 102 bits (217), Expect(5) = 1e-074
Identities = 56/150 (37%), Positives = 91/150 (60%)
Frame = +1 / -2
Query: 1267 RVIFILQVVNPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKH 1446
R + +L+ NP I SH QAIVK N T + AK RH+ +IF+N + ++*+V +H
Sbjct: 1440 RFVTLLEEFNPFICYSHMQAIVKTNTTIWDRDAKCRHSADIFTNGYSIRIKSMN*IVDQH 1261
Query: 1447 HVNNCIHSCVQTEIFLVVSSKPHIDTMVMIQH*CNSIKSEAIKHEFIQPISQVRKKKP*Y 1626
VN+ I+ +++I +V SK H+ +MV I H + IKS++IK F +P S+V + + *Y
Sbjct: 1260 *VNHRINISGESKILAIVPSKCHL*SMVSIHHGSHPIKSKSIKLIFFKPPSRV*Q*ES*Y 1081
Query: 1627 LPVSIVEQPTIPKFMITSISRMKIGLLGAL 1716
P IVEQ IP M+ + + +++ + A+
Sbjct: 1080 FPTPIVEQTRIPHPMMATWTTVEVMCISAI 991
Score = 81.7 bits (172), Expect(5) = e-117
Identities = 37/99 (37%), Positives = 52/99 (52%)
Frame = +1 / -2
Query: 967 SWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQ 1146
SWK+ PF + KLISH+I++A + H D+ +H + C +IN R R H +H L+HQ
Sbjct: 1737 SWKIYPFRMPKLISHEIKIAFAT*THGDKPDHFM*CYATINARG*RSIQSHEIIHILIHQ 1558
Query: 1147 EKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRP 1263
+CNS V N LIM I D + + H P
Sbjct: 1557 PECNSLVTN*CLIMTFCISDTLLKPPSIC*GVHNIAHFP 1441
Score = 80.3 bits (169), Expect(5) = 1e-074
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +2 / -3
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
+ +V II +A+PRS+ G G M YISLSI +NAIVLSPT *S LSA HFS
Sbjct: 1667 KPMVTSLIILCNAMPRSMRGVEGLSRAMKSYISLSINQNAIVLSPTSA*S*LSA*VTHFS 1488
Query: 1217 VYLLLVKVCAISPIDHSES 1273
+LL V+VC ISPI S
Sbjct: 1487 SHLLFVRVCTISPIFQDSS 1431
Score = 79.0 bits (166), Expect(5) = 1e-074
Identities = 36/89 (40%), Positives = 55/89 (61%)
Frame = +1 / -2
Query: 1771 DNIHQNSQTQTVCLINKIFEVLWCA*SAANRKEICHMVPERSIVRMLHNCHQLNCVVVIC 1950
+NIH+N QT+ +C I++ F VLW + +A K+I +MVP+ IV ML +CH L+C+V
Sbjct: 945 NNIHKNKQTKLMCSIDQGF*VLWSSKTATWCKKISNMVPKARIV*MLLDCHYLHCIVSKP 766
Query: 1951 SYAWQHIVCKFPICAYCWLFTTHTYMGFI 2037
+WQH++ K I Y H+ + FI
Sbjct: 765 FNSWQHLIPKISI*IYLRFRAAHSNV*FI 679
Score = 75.8 bits (159), Expect(6) = 0.0
Identities = 53/129 (41%), Positives = 65/129 (50%)
Frame = -3 / +2
Query: 1673 IINFGIVGCSTMLTGRY*GFFFLT*DIGWMNSCLMASDLMELHQCCIITMVSMWGLLETT 1494
II GI+ CSTM G+Y* + T D G N LM DLM CI+TM LL T
Sbjct: 1034 IIGCGILVCSTMGVGKY*DSYCQTRDGGLKNISLMDFDLMG*LP*CILTMDYK*HLLGTM 1213
Query: 1493 RNISVWTQLWMQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQW 1314
+I + M+ FT*C TI* + + L+KM C FA V L LTIA W
Sbjct: 1214 ASILDSPLMLMRWFT*CWSTI*FMDFIRMLYPLVKMSAECLHFASLSQMVVLVLTIACIW 1393
Query: 1313 LSLIDGLTT 1287
L I+GL +
Sbjct: 1394 L*QINGLNS 1420
Score = 67.0 bits (140), Expect(5) = 1e-025
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = -1 / +3
Query: 1663 LG*SAVQLC*LGGIKVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWYQCGVYWKLPGIF 1484
+G S+VQL LG IK+ + E++ I V*W+ I*W + V SPW +YW+L +F
Sbjct: 1044 VGFSSVQLWELGSIKILTVKREMVA*RI*V*WISI*WGDFHDVYSPWITNDIYWELWRVF 1223
Query: 1483 QFGHSCGCSCLHDACKPFNAQTLARSNCCC*RCFRHA 1373
H C C L +A + N+ TL+ *RC R+A
Sbjct: 1224 WIRH*C*CGGLLNAGQRSNSWTLSGCCIHW*RCQRNA 1334
Score = 66.1 bits (138), Expect(5) = 1e-074
Identities = 33/115 (28%), Positives = 65/115 (56%)
Frame = +1 / -2
Query: 616 EVIHVVANSSMSTEDQSIRVQGYSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLF 795
EV+ ++ + ST++ IRV G+ V PR + V + +E+ENK IS+F+D++L
Sbjct: 2121 EVVDIMIKPAESTKECIIRV*GHLVLPRLGTPNTVVFFAIAPVEVENKYQISSFEDDHLI 1942
Query: 796 LIVHVADDLL*RRKEGKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVV 960
++ + L+ R + ++ +H L++ +H + + I + K ++AFII V+
Sbjct: 1941 FLMFPRNILVLRCHKPIFFLKMLHCLIELLHTTISKKICISKIKSTAAFIITIVI 1777
Score = 62.5 bits (130), Expect(5) = e-117
Identities = 32/65 (49%), Positives = 39/65 (60%)
Frame = +2 / -3
Query: 2270 IDQTPNLSFSILWFAPFQSLKSPISSASCAAGAHSRYTVPSSFVLIPNFK*PLEKDSRLP 2449
I QTP S I+ FQ LKSP ++A CA GAHSR +P + + P+F *P EK S P
Sbjct: 449 ISQTP*SSLVIVSAFGFQLLKSPTNAAECAPGAHSR*VIPLALRVNPSFS*PREKTSNPP 270
Query: 2450 SFSSI 2464
S SI
Sbjct: 269 SCWSI 255
Score = 57.0 bits (118), Expect(5) = 1e-025
Identities = 36/90 (40%), Positives = 43/90 (47%)
Frame = -3 / +2
Query: 1991 HIGNLQTMCCHAYEQITTTQFS*WQLWSIRTMLLSGTM*QISLRLAADQAHQRTSNILLI 1812
H+ L CC + + T Q *WQ SI TM GTM I L A QRT N I
Sbjct: 725 HMLILGMRCCQELKGLDTMQCR*WQSRSIHTMRALGTMLLIFLHQVAVLELQRT*NP*SI 904
Query: 1811 RHTVWVCEF*WMLSIAMQVIMSQMV*MAMM 1722
H VC F W+L I ++ I+ V*M M
Sbjct: 905 EHMSLVCLFLWILFIVIRQIIPLTV*MVSM 994
Score = 55.1 bits (114), Expect(3) = 1e-084
Identities = 34/84 (40%), Positives = 41/84 (48%)
Frame = -3 / +2
Query: 1217 LKNASHMLRAMISLLLATKLLHFS*WTRKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWP 1038
L++ S M + MI L T+LLH *W R C ++ L L LI H +* S W
Sbjct: 1487 LRSVSLMQKVMIKH*LVTRLLHSG*WIRICMISWLWIDLQPLALIVA*HYIK*SGLSPWV 1666
Query: 1037 LEVMAT*ILWEMSLVTQNGLTFQE 966
A I WEMSL NG FQE
Sbjct: 1667 *VAKAILISWEMSLGILNG*IFQE 1738
Score = 48.7 bits (100), Expect(5) = 1e-074
Identities = 26/91 (28%), Positives = 39/91 (42%)
Frame = +1 / -2
Query: 2275 PNTKFILLHLMVCTIPVIEVTNKLCLLRSRCPFTIYSSILICINPKFQIAFRKRFKTXXX 2454
PNT I H + +P++EVT C +RSR PF++ + K I RK F++
Sbjct: 444 PNTIIISGHSICIWVPIVEVTY*CCRMRSRSPFSVSDTFSTAGKSKLFITTRKNFQSTFM 265
Query: 2455 XXXXXXXXXXXXHPVPEMVLEYLQLGVQVVY 2547
V +M + Q V +VY
Sbjct: 264 LVNSSTNSLVFAVSVVKMAPKIFQRWVNLVY 172
Score = 38.6 bits (78), Expect(3) = 1e-084
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = -1 / +3
Query: 1942 LQHSSVDGSYGAFVLCFFRVPCDKFLCG*QQIRHTRGPQISC**GTQFGFASSDGCC 1772
+Q S+ +G+ GAF+LC VPC F C ++RG +I * T FA S G C
Sbjct: 774 IQCSADNGNPGAFILCELWVPCY*FFCTK*PFWNSRGLKILDR*ST*AWFACSYGYC 944
Score = 31.3 bits (62), Expect(5) = 1e-025
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1 / +3
Query: 769 RFSFCFQFPSQENLRGLQSGMRFAWEIQSSPGL*CSGLRW 650
RF CFQ P ++ + L + AWE+Q L* L W
Sbjct: 1968 RFGICFQLPLEQ*QKRLPCWVFQAWEVQGGLRL**CTLWW 2087
Score = 29.0 bits (57), Expect(6) = 0.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 2262 DHVKGKPAIPHNSKVKFR 2209
++ G PAIPH S+VK R
Sbjct: 460 NNADGSPAIPHGSRVKIR 513
Score = 26.7 bits (52), Expect(5) = 1e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 1015 FYGK*VWSPRMD*LSKR 965
F+GK*VW+ MD SKR
Sbjct: 1689 FHGK*VWAS*MDRFSKR 1739
Score = 26.7 bits (52), Expect(5) = 1e-025
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / +3
Query: 1345 WGWV*LSPGNGYP**MD*LPE 1283
W W *LSP G *MD* P+
Sbjct: 1362 WCWF*LSPAYGCSR*MD*TPQ 1424
>gb|BM441900.2|BM441900 EBed07_SQ001_N21_R endosperm, 28 DPA, no treatment, cv Optic, EBed07
Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_N21 5', mRNA sequence
Length = 687
Score = 533 bits (1157), Expect = e-150
Identities = 212/226 (93%), Positives = 220/226 (97%)
Frame = -2 / +3
Query: 1338 GFDYRLAMAIPDRWIDYLKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKT 1159
GFDYRLAMAIPDRWIDYLKNKDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIVGDKT
Sbjct: 3 GFDYRLAMAIPDRWIDYLKNKDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIVGDKT 182
Query: 1158 IAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWI 979
+AFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWI
Sbjct: 183 MAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWI 362
Query: 978 DFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMND 799
DFPREGNNWSYDKCRRQWSLVD DHLRYKYMNAFDQAMNALD++FSFLSSSKQIVSDMN+
Sbjct: 363 DFPREGNNWSYDKCRRQWSLVDIDHLRYKYMNAFDQAMNALDDKFSFLSSSKQIVSDMNE 542
Query: 798 EEKVIVFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDAL 661
E+KVIVFERGDLVFVFNFHP KTY+G +VGCDLPGKY+VALDSDAL
Sbjct: 543 EKKVIVFERGDLVFVFNFHPNKTYDGXQVGCDLPGKYKVALDSDAL 680
Score = 370 bits (802), Expect = e-101
Identities = 160/226 (70%), Positives = 186/226 (82%)
Frame = +1 / -2
Query: 661 QSIRVQGYSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFLIVHVADDLL*RRKE 840
QSI VQ Y V PRQ+ S ++ F+GMEIE++N ISTFK NNL ++HVAD+LL* E
Sbjct: 680 QSIGVQSYLVLPRQVTSDLXTIIGFIGMEIEDENQISTFKYNNLLFLIHVADNLL****E 501
Query: 841 GKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKVNPFWVTKLISHKIQ 1020
GK ++ERIH L+K +HVLV VI+V +APL+SAFII P+V FSWKV+PFWV KLI+HKIQ
Sbjct: 500 GKFVVERIHCLIKCVHVLVS*VINVDEAPLASAFIITPIVAFSWKVDPFWVAKLITHKIQ 321
Query: 1021 VAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALSI 1200
VAITSK H DEVNHLL+CN +INCR*SRLQV*HAS+HFLVHQEKC+S VANNRLIMALSI
Sbjct: 320 VAITSKSHGDEVNHLLKCNATINCR*SRLQV*HASIHFLVHQEKCHSLVANNRLIMALSI 141
Query: 1201 CDAFFSISPVSQSMRYFTHRPLRVIFILQVVNPSIRDSHCQAIVKP 1338
C+A F ISPV SM Y TH P +VIF+LQVVNPSIR SH QAIVKP
Sbjct: 140 CNALFRISPVG*SMCYSTH*PFKVIFVLQVVNPSIRYSHSQAIVKP 3
Score = 351 bits (760), Expect = 1e-095
Identities = 160/224 (71%), Positives = 177/224 (79%)
Frame = -1 / +2
Query: 1336 V*LSPGNGYP**MD*LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNY 1157
V*LSPG GY **MD*L EE R* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWRQ+Y
Sbjct: 5 V*LSPGYGYT**MD*LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWRQDY 184
Query: 1156 CISPDGQGNVHWHVRLAACFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD* 977
IS DGQGNV+WHVRLAACFTYN*S CT KDDSLHH+G WR*WLLEFYG *VW PRMD
Sbjct: 185 GISLDGQGNVYWHVRLAACFTYN*SWHCTSKDDSLHHHGSWR*WLLEFYG**VWPPRMDR 364
Query: 976 LSKRREQLEL**MQTTVEPCGH*SLAVQVHECV*PSDECAR*EIFLPFVVKADRQRHER* 797
LSKRR+QLEL**MQT VEP H*S +QVHE +* S+ECAR +IFLP ++KAD QRHE
Sbjct: 365 LSKRRQQLEL**MQTPVEPRRH*SPTIQVHERI*SSNECARRQIFLPIIIKADCQRHE*G 544
Query: 796 GKGYCL*TWRFSFCFQFPSQENLRGLQSGMRFAWEIQSSPGL*C 665
+GYC+*TWR F QFPSQ NL L S M AWE+Q S GL C
Sbjct: 545 KEGYCI*TWRSGFRLQFPSQ*NL*WLXSRM*LAWEVQGSSGLRC 676
Score = 337 bits (731), Expect = 1e-091
Identities = 162/225 (72%), Positives = 173/225 (76%)
Frame = -3 / +1
Query: 1337 GLTIAWQWLSLIDGLTT*RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLLATKL 1158
GLTIAW WL LIDGLTT*R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLLAT+L
Sbjct: 4 GLTIAWLWLYLIDGLTT*RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLLATRL 183
Query: 1157 LHFS*WTRKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVTQNGL 978
HFS*WTRKC LACQTCSLLHLQLI LH KR*FTSS W LEVMAT*ILW MSL TQNG
Sbjct: 184 WHFS*WTRKCILACQTCSLLHLQLIVALHFKR*FTSSPWLLEVMAT*ILWVMSLATQNGS 363
Query: 977 TFQEKGTTGAMINADDSGALWTLITCGTST*MRLTKR*MRSMRDFPSFRRQSRSSAT*TM 798
TFQEK T G MINAD SGA TLIT TST* L K+*MRS +FPS+ QSR SAT*
Sbjct: 364 TFQEKATIGVMINADASGASSTLITYDTST*THLIKQ*MRSTTNFPSYHHQSRLSAT*MR 543
Query: 797 RKRLLSLNVEI*FLFSISIPRKLTRATKWDAICLGNTE*PWTLML 663
++RLL LNVEI F SISIP K K D CLG+T * WT ML
Sbjct: 544 KRRLLYLNVEIWFSSSISIPIKPMMVXKSDVTCLGSTR*LWTPML 678
Score = 300 bits (650), Expect = 2e-080
Identities = 138/225 (61%), Positives = 150/225 (66%)
Frame = +3 / -1
Query: 663 EHQSPGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGR 842
+H+SP L C SQA+ I L + +F WDGN*++K +LHVQ Q*P SCR*+SAL GR
Sbjct: 678 KHRSPELPCTSQASHIRLXNHHRFYWDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGR 499
Query: 843 KISHRAHSSLGQTHSCTCTASDQCPQGSTVVCIYHXXXXXXXXXXXXXXGDQTHFP*NSS 1022
KI RAHS L Q SCTC DQC +GST VCIYH G QTH+P*NSS
Sbjct: 498 KICRRAHSLLDQMRSCTCIVGDQCRRGSTGVCIYHNSNCCLLLESRSILGGQTHYP*NSS 319
Query: 1023 SHHLQGPL**SESSFGVQSLDQL*VKQAASLTCQCTFPCPSGEMQ*FCRQQ*TDHGSQHM 1202
SHHLQ P **SESSF VQ DQL*VKQAASLTCQ TFPCPS EM * CRQQ*TDHGSQHM
Sbjct: 318 SHHLQEPW**SESSFEVQCHDQL*VKQAASLTCQYTFPCPSREMP*SCRQQ*TDHGSQHM 139
Query: 1203 RCIFQYISC*SKYALFHPSTTQSHLXXXXXXXXXXXXPLPGDSQT 1337
+C F YISC KY LFH T Q HL P PGDSQT
Sbjct: 138 QCTFPYISCWLKYVLFHSLTIQGHLCSSSSQSIYQV*P*PGDSQT 4
Score = 225 bits (485), Expect(2) = e-113
Identities = 98/110 (89%), Positives = 103/110 (93%)
Frame = +2 / -3
Query: 662 RASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERK 841
+ASESRATLYFPGKSHPT *PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RK
Sbjct: 679 KASESRATLYFPGKSHPTX*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRK 500
Query: 842 ENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHSG 991
ENLSSSAFIA SNAFMYLYR+*S+STRLH RLHLS*LQL PSLGKSIHSG
Sbjct: 499 ENLSSSAFIA*SNAFMYLYRR*SMSTRLHWRLHLS*LQLLPSLGKSIHSG 350
Score = 206 bits (445), Expect(2) = e-113
Identities = 93/101 (92%), Positives = 97/101 (96%)
Frame = +2 / -3
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 304 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 125
Query: 1217 VYLLLVKVCAISPIDHSESSLFFR*SIHLSGIAIARR*SNP 1339
VYLLLVKVCAI IDHS SSLFF+*SIHLSGIAIARR*SNP
Sbjct: 124 VYLLLVKVCAIPLIDHSRSSLFFK*SIHLSGIAIARR*SNP 2
>gb|AW983497.2|AW983497 HVSMEg0010N11f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010N11f, mRNA sequence
Length = 839
Score = 518 bits (1125), Expect = e-146
Identities = 210/240 (87%), Positives = 221/240 (92%)
Frame = -2 / +3
Query: 1497 YQEYFSLDTAVDAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLA 1318
Y+EYF LDT VDAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCR VDEGGVGFDYRLA
Sbjct: 3 YKEYFGLDTDVDAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRSVDEGGVGFDYRLA 182
Query: 1317 MAIPDRWIDYLKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMD 1138
MAIPDRWIDYLKNKDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIVGDKT+AFLLMD
Sbjct: 183 MAIPDRWIDYLKNKDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIVGDKTMAFLLMD 362
Query: 1137 KEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGN 958
KEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDF REG+
Sbjct: 363 KEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFSREGH 542
Query: 957 NWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVIVF 778
NW+YDKCRR WSLVD HL Y+YMN FDQAMNAL+ +FSF SSK IV+D+N+E+K F
Sbjct: 543 NWNYDKCRRPWSLVDIVHLPYRYMNPFDQAMNALEHQFSFPLSSKPIVTDLNEEKKGFCF 722
Score = 385 bits (836), Expect = e-106
Identities = 168/240 (70%), Positives = 193/240 (80%)
Frame = +1 / -1
Query: 778 KDNNLFLIVHVADDLL*RRKEGKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPV 957
K F ++ V D+ L* ++GK + ERIH L+K +HV V V +V +AP +SAFII P+
Sbjct: 722 KTKPFFFLIQVGDNRL***RKGKLVFERIHGLIKGVHVPVW*VNNVDEAPRASAFIIIPI 543
Query: 958 VPFSWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFL 1137
V FS KV+PFWV KLI+HKIQVAITSK H DEVNHLL+CN +INCR*SRLQV*HAS+HFL
Sbjct: 542 VAFS*KVDPFWVAKLITHKIQVAITSKSHGDEVNHLLKCNATINCR*SRLQV*HASIHFL 363
Query: 1138 VHQEKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRPLRVIFILQVVNPSIRDSH 1317
VHQEKC+S VANNRLIMALSIC+A F ISPV SM Y TH P +VIF+LQVVNPSIR SH
Sbjct: 362 VHQEKCHSLVANNRLIMALSICNALFRISPVG*SMCYSTH*PFKVIFVLQVVNPSIRYSH 183
Query: 1318 CQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKHHVNNCIHSCVQTEIFLV 1497
QAIVKP PTFIN P K HA*NIF NNSCFWQEFVH*MV +HHVNNCI+ +QT+IFLV
Sbjct: 182 SQAIVKPYPTFIN*PTKHWHA*NIFRNNSCFWQEFVH*MVREHHVNNCIYISIQTKIFLV 3
Score = 380 bits (823), Expect = e-104
Identities = 171/232 (73%), Positives = 184/232 (79%)
Frame = -1 / +2
Query: 1498 LPGIFQFGHSCGCSCLHDACKPFNAQTLARSNCCC*RCFRHAGPLPAS**RWGWV*LSPG 1319
L GIF FG+ C CSCLHDA +PFNAQTLARSNCCC RCFRHA L S**RWG V*LSPG
Sbjct: 2 LQGIFWFGY*CRCSCLHDAREPFNAQTLARSNCCCGRCFRHASALSVS**RWGRV*LSPG 181
Query: 1318 NGYP**MD*LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDG 1139
GY **MD*L EE R* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWRQ+Y IS DG
Sbjct: 182 YGYT**MD*LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWRQDYGISLDG 361
Query: 1138 QGNVHWHVRLAACFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD*LSKRRE 959
QGNV+WHVRLAACFTYN*S CT KDDSLHH+G WR*WLLEFYG *VW PRMD L KRR
Sbjct: 362 QGNVYWHVRLAACFTYN*SWHCTSKDDSLHHHGSWR*WLLEFYG**VWPPRMDRLFKRRP 541
Query: 958 QLEL**MQTTVEPCGH*SLAVQVHECV*PSDECAR*EIFLPFVVKADRQRHE 803
QLEL**MQT VEP H S +QVHE +* S ECAR IFL F++KAD R E
Sbjct: 542 QLEL**MQTPVEPRRHCSPTIQVHEPL*SSHECARTPIFLSFIIKADCHRLE 697
Score = 367 bits (796), Expect = e-100
Identities = 173/236 (73%), Positives = 184/236 (77%)
Frame = -3 / +1
Query: 1496 TRNISVWTQLWMQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQ 1317
TRNI VW + MQLFT*C +TI*CTNSCQKQLLL KMFQAC+ F GQLMKVG GLTIAW
Sbjct: 4 TRNILVWILM*MQLFT*CSRTI*CTNSCQKQLLLRKMFQACQCFVGQLMKVG*GLTIAWL 183
Query: 1316 WLSLIDGLTT*RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLLATKLLHFS*WT 1137
WL LIDGLTT*R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLLAT+L HFS*WT
Sbjct: 184 WLYLIDGLTT*RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLLATRLWHFS*WT 363
Query: 1136 RKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVTQNGLTFQEKGT 957
RKC LACQTCSLLHLQLI LH KR*FTSS W LEVMAT*ILW MSL TQNG TFQEK T
Sbjct: 364 RKCILACQTCSLLHLQLIVALHFKR*FTSSPWLLEVMAT*ILWVMSLATQNGSTFQEKAT 543
Query: 956 TGAMINADDSGALWTLITCGTST*MRLTKR*MRSMRDFPSFRRQSRSSAT*TMRKR 789
G MINAD GA TL T T T* L K *MRS +FP QSR S T* +K+
Sbjct: 544 IGIMINADARGASSTLFTYHTGT*TPLIKP*MRSNTNFPFLYHQSRLSPT*MRKKK 711
Score = 313 bits (677), Expect = 4e-084
Identities = 144/230 (62%), Positives = 150/230 (65%)
Frame = +3 / -3
Query: 804 SCR*RSALTTKGRKISHRAHSSLGQTHSCTCTASDQCPQGSTVVCIYHXXXXXXXXXXXX 983
S R*+SAL K RKI RAHS L Q SCTC +QC +GST VCIYH
Sbjct: 696 SSR*QSALMIKERKIGVRAHSWLDQRGSCTCMVGEQCRRGSTGVCIYHNSNCGLLLKSRS 517
Query: 984 XXGDQTHFP*NSSSHHLQGPL**SESSFGVQSLDQL*VKQAASLTCQCTFPCPSGEMQ*F 1163
G QTH+P*NSSSHHLQ P **SESSF VQ DQL*VKQAASLTCQ TFPCPS EM *
Sbjct: 516 ILGGQTHYP*NSSSHHLQEPW**SESSFEVQCHDQL*VKQAASLTCQYTFPCPSREMP*S 337
Query: 1164 CRQQ*TDHGSQHMRCIFQYISC*SKYALFHPSTTQSHLXXXXXXXXXXXXPLPGDSQTQP 1343
CRQQ*TDHGSQHM+C F YISC KY LFH T Q HL P PGDSQT P
Sbjct: 336 CRQQ*TDHGSQHMQCTFPYISCWLKYVLFHSLTIQGHLCSSSSQSIYQV*P*PGDSQTLP 157
Query: 1344 HLHQLAGKGPACLKHXXXXXXXXARVCALNGLQASCKQLHPQLCPN*NIP 1493
HLHQL K ACLKH ARVCALNG +ASCKQLH PN NIP
Sbjct: 156 HLHQLTDKALACLKHLPQQQLLLARVCALNGSRASCKQLHLHQYPNQNIP 7
Score = 311 bits (674), Expect(3) = e-109
Identities = 140/152 (92%), Positives = 145/152 (95%)
Frame = +2 / -2
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 463 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 284
Query: 1217 VYLLLVKVCAISPIDHSESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSA 1396
VYLLLVKVCAI IDHS SSLFF+*SIHLSGIAIARR*SNPTPPSST RQ TGMPETSSA
Sbjct: 283 VYLLLVKVCAIPLIDHSRSSLFFK*SIHLSGIAIARR*SNPTPPSSTDRQSTGMPETSSA 104
Query: 1397 TTVASGKSLCIKWFASIM*TTASTAVSKLKYS 1492
TTVASGKSLCIKWFASIM*TTAST+VSK KYS
Sbjct: 103 TTVASGKSLCIKWFASIM*TTASTSVSKPKYS 8
Score = 101 bits (216), Expect(3) = e-109
Identities = 47/67 (70%), Positives = 54/67 (80%)
Frame = +2 / -2
Query: 791 FSSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSL 970
F SSF S+TI FDD+ KEN SSAF+A S FMYLY +*++STRLH RLHLS* QL+PSL
Sbjct: 709 FFSSFKSVTIGFDDKGKENWCSSAFMA*SKGFMYLYGR*TMSTRLHGRLHLS*FQLWPSL 530
Query: 971 GKSIHSG 991
KSIHSG
Sbjct: 529 EKSIHSG 509
Score = 24.0 bits (46), Expect(3) = e-109
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / -2
Query: 686 LYFPGKSHPTL*PS*VFLGWKLKTKTK 766
L F GKS+ + P F+G ++K KT+
Sbjct: 817 LVFRGKSNSSCEPIMGFMGREMKAKTQ 737
>gb|BU968566.1|BU968566 HB07O20r BC Hordeum vulgare subsp. vulgare cDNA clone HB07O20
5-PRIME, mRNA sequence
Length = 575
Score = 431 bits (936), Expect = e-120
Identities = 173/188 (92%), Positives = 181/188 (96%)
Frame = -2 / +1
Query: 1638 ANWEVLRFLLSNLRYWLDEFMFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDA 1459
ANWEVLRFLLSNLRYW+DEFMFDGFRFDGVTSMLY+HHGIN+ F+G+Y+EYF LDT VDA
Sbjct: 10 ANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYNHHGINMSFSGDYKEYFGLDTDVDA 189
Query: 1458 VVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKN 1279
VVYMMLANHLMHKLLPEAT+VAEDVSGMPVLCR VDEGGVGFDYRLAMAIPDRWIDYLKN
Sbjct: 190 VVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRSVDEGGVGFDYRLAMAIPDRWIDYLKN 369
Query: 1278 KDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPA 1099
KDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIVGDKT+AFLLMDKEMYTGMSDLQPA
Sbjct: 370 KDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIVGDKTMAFLLMDKEMYTGMSDLQPA 549
Query: 1098 SPTIDRGI 1075
SPTIDRGI
Sbjct: 550 SPTIDRGI 573
Score = 374 bits (811), Expect = e-102
Identities = 168/189 (88%), Positives = 173/189 (91%)
Frame = +2 / -1
Query: 1073 AIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAIS 1252
A+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAI
Sbjct: 575 AMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAIP 396
Query: 1253 PIDHSESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIK 1432
IDHS SSLFF+*SIHLSGIAIARR*SNPTPPSST RQ TGMPETSSAT VASGKSLCIK
Sbjct: 395 LIDHSRSSLFFK*SIHLSGIAIARR*SNPTPPSSTDRQSTGMPETSSATIVASGKSLCIK 216
Query: 1433 WFASIM*TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLER 1612
WFASIM*TTAST+VSK KYS * P N LIPW* YS+DVTPSNRKPSNMNSS QYLRLER
Sbjct: 215 WFASIM*TTASTSVSKPKYSL*SPENDILIPW*LYSMDVTPSNRKPSNMNSSIQYLRLER 36
Query: 1613 RNLNTSQLA 1639
RN TSQLA
Sbjct: 35 RNRKTSQLA 9
Score = 333 bits (721), Expect = 3e-090
Identities = 143/190 (75%), Positives = 159/190 (83%)
Frame = +1 / -3
Query: 1075 NPSINCR*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFT 1254
N +INCR*SRLQV*HAS+HFLVHQEKC+S VANNRLIMALSIC+A F ISPV SM Y T
Sbjct: 573 NATINCR*SRLQV*HASIHFLVHQEKCHSLVANNRLIMALSICNALFRISPVG*SMCYST 394
Query: 1255 HRPLRVIFILQVVNPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*M 1434
H P +VIF+LQVVNPSIR SH QAIVKP PTFIN P K HA*NIF NNSCFWQEFVH*M
Sbjct: 393 H*PFKVIFVLQVVNPSIRYSHSQAIVKPYPTFIN*PTKHWHA*NIFRNNSCFWQEFVH*M 214
Query: 1435 VCKHHVNNCIHSCVQTEIFLVVSSKPHIDTMVMIQH*CNSIKSEAIKHEFIQPISQVRKK 1614
V +HHVNNCI+ +QTEIFLV+S + HIDTMV+I H C +KSEAIKHEF+ PISQ+RKK
Sbjct: 213 VREHHVNNCIYISIQTEIFLVISRE*HIDTMVII*HGCYPVKSEAIKHEFVHPISQIRKK 34
Query: 1615 KP*YLPVSIV 1644
K * LPV +V
Sbjct: 33 KS*DLPVGLV 4
Score = 316 bits (685), Expect = 3e-085
Identities = 145/190 (76%), Positives = 154/190 (81%)
Frame = -3 / +2
Query: 1643 TMLTGRY*GFFFLT*DIGWMNSCLMASDLMELHQCCIITMVSMWGLLETTRNISVWTQLW 1464
T TGR FFFL *DIGW NSCLMASDL H C IITMVS+ LE TRNISVW +
Sbjct: 5 TRPTGRSYDFFFLI*DIGWTNSCLMASDLTG*HPCYIITMVSICHSLEITRNISVWILM* 184
Query: 1463 MQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQWLSLIDGLTT* 1284
MQLFT*C +TI*CTNSCQKQLLL KMFQAC+ F GQLMKVG GLTIAW WL LIDGLTT*
Sbjct: 185 MQLFT*CSRTI*CTNSCQKQLLLRKMFQACQCFVGQLMKVG*GLTIAWLWLYLIDGLTT* 364
Query: 1283 RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLLATKLLHFS*WTRKCTLACQTCS 1104
R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLLAT+L HFS*WTRKC LACQTCS
Sbjct: 365 RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLLATRLWHFS*WTRKCILACQTCS 544
Query: 1103 LLHLQLIEGL 1074
LLHLQLI L
Sbjct: 545 LLHLQLIVAL 574
Score = 303 bits (657), Expect = 2e-081
Identities = 135/187 (72%), Positives = 150/187 (80%)
Frame = -1 / +3
Query: 1633 LGGIKVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWYQCGVYWKLPGIFQFGHSCGCSC 1454
LGG+ +SSF* EIL G IHV*WLPI* I+A+ SPWYQ + W+L GIF+FG+ C CSC
Sbjct: 15 LGGLTISSF*SEILDGRIHV*WLPI*RGNIHAI*SPWYQYVILWRLQGIFRFGY*CRCSC 194
Query: 1453 LHDACKPFNAQTLARSNCCC*RCFRHAGPLPAS**RWGWV*LSPGNGYP**MD*LPEE*R 1274
LHDA +PFNAQTLARSN CC RCFRHA L S**RWG V*LSPG GY **MD*L EE R
Sbjct: 195 LHDAREPFNAQTLARSNYCCGRCFRHASALSVS**RWGRV*LSPGYGYT**MD*LLEEQR 374
Query: 1273 *L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDGQGNVHWHVRLAACFT 1094
* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWRQ+Y IS DGQGNV+WHVRLAACFT
Sbjct: 375 *P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWRQDYGISLDGQGNVYWHVRLAACFT 554
Query: 1093 YN*SRDC 1073
YN*S C
Sbjct: 555 YN*SWHC 575
Score = 256 bits (554), Expect = 4e-067
Identities = 119/187 (63%), Positives = 125/187 (66%)
Frame = +3 / -2
Query: 1074 QSLDQL*VKQAASLTCQCTFPCPSGEMQ*FCRQQ*TDHGSQHMRCIFQYISC*SKYALFH 1253
Q DQL*VKQAASLTCQ TFPCPS EM * CRQQ*TDHGSQHM+C F YISC KY LFH
Sbjct: 574 QCHDQL*VKQAASLTCQYTFPCPSREMP*SCRQQ*TDHGSQHMQCTFPYISCWLKYVLFH 395
Query: 1254 PSTTQSHLXXXXXXXXXXXXPLPGDSQTQPHLHQLAGKGPACLKHXXXXXXXXARVCALN 1433
T Q HL P PGDSQT PHLHQL K ACLKH ARVCALN
Sbjct: 394 SLTIQGHLCSSSSQSIYQV*P*PGDSQTLPHLHQLTDKALACLKHLPQQ*LLLARVCALN 215
Query: 1434 GLQASCKQLHPQLCPN*NIPGSFQ*TPH*YHGDDTALM*LHQIGSHQT*IHPTNISG*KE 1613
G +ASCKQLH PN NIP + Q +*YHGD A M QIGSHQT*I P+NIS *KE
Sbjct: 214 GSRASCKQLHLHQYPNRNIPCNLQRMTY*YHGDYIAWMLPRQIGSHQT*IRPSNISD*KE 35
Query: 1614 ETLIPPS 1634
E + PPS
Sbjct: 34 EIVRPPS 14
>gb|BU970604.1|BU970604 HB15C08r BC Hordeum vulgare subsp. vulgare cDNA clone HB15C08
5-PRIME, mRNA sequence
Length = 578
Score = 430 bits (933), Expect = e-119
Identities = 168/186 (90%), Positives = 180/186 (96%)
Frame = -2 / +3
Query: 2055 PAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRANNYNTVQLMAVMEHSYYASFGYHV 1876
P APRIYEAHVGMSGEKP VSTYREFADNVLPR++ANNYNTVQLMA+ EHSYYASFGYHV
Sbjct: 12 PDAPRIYEAHVGMSGEKPEVSTYREFADNVLPRVKANNYNTVQLMAIKEHSYYASFGYHV 191
Query: 1875 TNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQSTQESY 1696
TNFFA SSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHAS+N+TDGLNGYDVGQ+TQESY
Sbjct: 192 TNFFAASSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASSNMTDGLNGYDVGQNTQESY 371
Query: 1695 FHAGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWLDEFMFDGFRFDGVTSMLYHHHGIN 1516
FH G+RGYHKLWDSRLFNYANWEVLRFLLSNLRYW+DEFMFDGFRFDGVTSMLY+HHGIN
Sbjct: 372 FHTGERGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYNHHGIN 551
Query: 1515 VGFTGN 1498
+ F+G+
Sbjct: 552 MSFSGD 569
Score = 280 bits (606), Expect = 3e-074
Identities = 125/187 (66%), Positives = 139/187 (74%)
Frame = -1 / +2
Query: 2059 KACCSTYL*SPCRYEW*KASSKHI*GICRQCVATHTSK*LQHSSVDGSYGAFVLCFFRVP 1880
+A C TY+* CR EW*+A SKHI ICRQCVAT K*LQHSSVDG+ G F+LCFF VP
Sbjct: 8 RARCPTYI*GSCRDEW*EA*SKHIQRICRQCVATRKGK*LQHSSVDGNQGTFILCFFWVP 187
Query: 1879 CDKFLCG*QQIRHTRGPQISC**GTQFGFASSDGCCP*PCK**CHRWFKWL*CWTKHPRV 1700
CD+FL G*QQIRH RG QISC* GT F A SDGCCP*PC+ * RW KWL*CW KH V
Sbjct: 188 CDEFLRG*QQIRHARGSQISC*QGT*FRAACSDGCCP*PCEQ*YDRWSKWL*CWAKHTGV 367
Query: 1699 LFSCGR*RLS*TLG*SAVQLC*LGGIKVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWY 1520
LF R LS*T+G* VQLC LGG+ +SSF* EIL G IHV*WLPI* I+A+ SPWY
Sbjct: 368 LFPHRRKGLS*TVG*PPVQLCQLGGLTISSF*SEILDGRIHV*WLPI*RXNIHAI*SPWY 547
Query: 1519 QCGVYWK 1499
Q + W+
Sbjct: 548 QYVILWR 568
Score = 260 bits (562), Expect = 3e-068
Identities = 112/183 (61%), Positives = 131/183 (71%)
Frame = +1 / -1
Query: 1498 VSSKPHIDTMVMIQH*CNSIKSEAIKHEFIQPISQVRKKKP*YLPVSIVEQPTIPKFMIT 1677
+S + HIDTMV+I H C +KSEAIKHEF+ PISQ+RKKK * LPV IVEQ IP+FMI
Sbjct: 569 ISRE*HIDTMVII*HGCYXVKSEAIKHEFVHPISQIRKKKS*DLPVGIVEQAAIPQFMIA 390
Query: 1678 SISRMKIGLLGALSNXXXXXXXXXXXXXXXXDNIHQNSQTQTVCLINKIFEVLWCA*SAA 1857
S ++IGLL L N DNIHQN+Q T+CL+NKIFE+LW A*SAA
Sbjct: 389 PFSCVEIGLLCVLPNIIAI*TICHITARMAMDNIHQNTQP*TMCLVNKIFEILWRA*SAA 210
Query: 1858 NRKEICHMVPERSIVRMLHNCHQLNCVVVICSYAWQHIVCKFPICAYCWLFTTHTYMGFI 2037
+R+EI HMVP+RSI+ M +CHQLNCVVVIC YAWQHIVCKF +CAY L TTH M I
Sbjct: 209 SREEIRHMVPKRSII*MFLDCHQLNCVVVICLYAWQHIVCKFSVCAYFRLLTTHPDMSLI 30
Query: 2038 DTW 2046
TW
Sbjct: 29 YTW 21
Score = 245 bits (529), Expect(2) = 7e-084
Identities = 108/124 (87%), Positives = 112/124 (90%)
Frame = +2 / -2
Query: 1685 PA*K*DSWVLCPTS*PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRSSGVPDLLLTA 1864
P K*DS V CPTS*PF+PSV LLLAWLWTTSIRTR PKLCALSTRYLRSSGVPDLLL A
Sbjct: 382 PVWK*DSCVFCPTS*PFRPSVILLLAWLWTTSIRTRSPKLCALSTRYLRSSGVPDLLLAA 203
Query: 1865 KKFVTWYPKEA*YECSITAIN*TVL*LFARMRGNTLSANSLYVLTAGFSPLIPTWAS*IR 2044
KKFVTWYPKEA*YECS+ AIN*TVL*LFA RGNTLSANSLYVLT+GFSPLIPT AS IR
Sbjct: 202 KKFVTWYPKEA*YECSLIAIN*TVL*LFAFTRGNTLSANSLYVLTSGFSPLIPT*ASYIR 23
Query: 2045 GAAG 2056
GA+G
Sbjct: 22 GASG 11
Score = 237 bits (512), Expect = 2e-061
Identities = 114/166 (68%), Positives = 122/166 (73%)
Frame = -3 / +1
Query: 1997 *AHIGNLQTMCCHAYEQITTTQFS*WQLWSIRTMLLSGTM*QISLRLAADQAHQRTSNIL 1818
*AH NLQTMCCHA QITTTQFS*WQ +I MLL GTM*+IS RLAADQA QR SNIL
Sbjct: 70 *AHTENLQTMCCHA*RQITTTQFS*WQSRNIHIMLLLGTM*RISSRLAADQARQRISNIL 249
Query: 1817 LIRHTVWVCEF*WMLSIAMQVIMSQMV*MAMMLDKAPKSPIFMREIEVIINFGIVGCSTM 1638
L RH V C F*WMLSIAM+ ++ QMV*MAMML K +SPI +E IIN GI CSTM
Sbjct: 250 LTRHIV*GCVF*WMLSIAMRAVI*QMV*MAMMLGKTHRSPISTQEKGAIINCGIAACSTM 429
Query: 1637 LTGRY*GFFFLT*DIGWMNSCLMASDLMELHQCCIITMVSMWGLLE 1500
TGR FFFL *DIGW NSCLMASDL H C IITMVS+ LE
Sbjct: 430 PTGRSYDFFFLI*DIGWTNSCLMASDLTX*HPCYIITMVSICHSLE 567
Score = 149 bits (321), Expect(2) = 2e-055
Identities = 66/94 (70%), Positives = 70/94 (74%)
Frame = +3 / -3
Query: 1779 PSELANPNCVPYQQDI*GPLVCLICC*PQRNLSHGTRKKHSTNAP*LPSTELCCSYLLVC 1958
PSE A N VP QQDI* PL CLICC*P+RN SHGT+KKH+ N P*LPSTELCCSYL +
Sbjct: 288 PSEHAALNYVPCQQDI*DPLACLICC*PRRNSSHGTQKKHNMNVP*LPSTELCCSYLPLR 109
Query: 1959 VATHCLQIPYMCLLLAFHHSYLHGLHRYVEQQAL 2060
VATHCLQI MCLL A HHS H H YV AL
Sbjct: 108 VATHCLQILCMCLLQASHHSSRHEPHIYVGHLAL 7
Score = 88.6 bits (187), Expect(2) = 2e-055
Identities = 42/67 (62%), Positives = 47/67 (70%)
Frame = +3 / -3
Query: 1515 H*YHGDDTALM*LHQIGSHQT*IHPTNISG*KEETLIPPS*HS*TADYPKVYDNLYLPHE 1694
+*YHGD A M QIGSHQT*I P+NIS *KEE + PPS HS*T YP VYD+ +L
Sbjct: 552 Y*YHGDYIAWMLXRQIGSHQT*IRPSNISD*KEEIVRPPSWHS*TGGYPTVYDSPFLLCG 373
Query: 1695 NRTLGCF 1715
NRT CF
Sbjct: 372 NRTPVCF 352
Score = 88.1 bits (186), Expect(2) = 7e-084
Identities = 39/47 (82%), Positives = 40/47 (85%)
Frame = +2 / -2
Query: 1502 PVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNTSQLA* 1642
P N LIPW* YS+DVTPSNRKPSNMNSS QYLRLERRN TSQLA*
Sbjct: 565 PENDILIPW*LYSMDVTPSNRKPSNMNSSIQYLRLERRNRKTSQLA* 425
>gb|BU969855.1|BU969855 HB12M24r BC Hordeum vulgare subsp. vulgare cDNA clone HB12M24
5-PRIME, mRNA sequence
Length = 507
Score = 407 bits (882), Expect = e-112
Identities = 161/166 (96%), Positives = 162/166 (97%)
Frame = -2 / +3
Query: 1350 EGGVGFDYRLAMAIPDRWIDYLKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIV 1171
EGGVGFDYRLAMAIPDRWIDYLKNKDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIV
Sbjct: 9 EGGVGFDYRLAMAIPDRWIDYLKNKDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIV 188
Query: 1170 GDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGH 991
GDKT+AFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGH
Sbjct: 189 GDKTMAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGH 368
Query: 990 PEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALD 853
PEWIDFPREGNNWSYDKCRRQWSLVD DHLRYKYMNAFDQAMNALD
Sbjct: 369 PEWIDFPREGNNWSYDKCRRQWSLVDIDHLRYKYMNAFDQAMNALD 506
Score = 298 bits (645), Expect = 1e-079
Identities = 126/167 (75%), Positives = 143/167 (85%)
Frame = +1 / -2
Query: 853 IERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKVNPFWVTKLISHKIQVAIT 1032
+ERIH L+K +HVLV VI+V +APL+SAFII P+V FSWKV+PFWV KLI+HKIQVAIT
Sbjct: 506 VERIHCLIKCVHVLVS*VINVDEAPLASAFIITPIVAFSWKVDPFWVAKLITHKIQVAIT 327
Query: 1033 SKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALSICDAF 1212
SK H DEVNHLL+CN +INCR*SRLQV*HAS+HFLVHQEKC+S VANNRLIMALSIC+A
Sbjct: 326 SKSHGDEVNHLLKCNATINCR*SRLQV*HASIHFLVHQEKCHSLVANNRLIMALSICNAL 147
Query: 1213 FSISPVSQSMRYFTHRPLRVIFILQVVNPSIRDSHCQAIVKPNPTFI 1353
F ISPV SM Y TH P +VIF+LQVVNPSIR SH QAIVKP PT +
Sbjct: 146 FRISPVG*SMCYSTH*PFKVIFVLQVVNPSIRYSHSQAIVKPYPTLV 6
Score = 276 bits (597), Expect = 4e-073
Identities = 125/164 (76%), Positives = 136/164 (82%)
Frame = -1 / +2
Query: 1345 WGWV*LSPGNGYP**MD*LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWR 1166
WG V*LSPG GY **MD*L EE R* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWR
Sbjct: 14 WGRV*LSPGYGYT**MD*LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWR 193
Query: 1165 QNYCISPDGQGNVHWHVRLAACFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPR 986
Q+Y IS DGQGNV+WHVRLAACFTYN*S CT KDDSLHH+G WR*WLLEFYG *VW PR
Sbjct: 194 QDYGISLDGQGNVYWHVRLAACFTYN*SWHCTSKDDSLHHHGSWR*WLLEFYG**VWPPR 373
Query: 985 MD*LSKRREQLEL**MQTTVEPCGH*SLAVQVHECV*PSDECAR 854
MD LSKRR+QLEL**MQT VEP H*S +QVHE +* S+ECAR
Sbjct: 374 MDRLSKRRQQLEL**MQTPVEPRRH*SPTIQVHERI*SSNECAR 505
Score = 272 bits (588), Expect = 8e-072
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3 / +1
Query: 1349 KVGLGLTIAWQWLSLIDGLTT*RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLL 1170
+VG GLTIAW WL LIDGLTT*R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLL
Sbjct: 10 RVG*GLTIAWLWLYLIDGLTT*RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLL 189
Query: 1169 ATKLLHFS*WTRKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVT 990
AT+L HFS*WTRKC LACQTCSLLHLQLI LH KR*FTSS W LEVMAT*ILW MSL T
Sbjct: 190 ATRLWHFS*WTRKCILACQTCSLLHLQLIVALHFKR*FTSSPWLLEVMAT*ILWVMSLAT 369
Query: 989 QNGLTFQEKGTTGAMINADDSGALWTLITCGTST*MRLTKR*MRS 855
QNG TFQEK T G MINAD SGA TLIT TST* L K+*MRS
Sbjct: 370 QNGSTFQEKATIGVMINADASGASSTLITYDTST*THLIKQ*MRS 504
Score = 235 bits (507), Expect = 1e-060
Identities = 105/164 (64%), Positives = 108/164 (65%)
Frame = +3 / -1
Query: 855 RAHSSLGQTHSCTCTASDQCPQGSTVVCIYHXXXXXXXXXXXXXXGDQTHFP*NSSSHHL 1034
RAHS L Q SCTC DQC +GST VCIYH G QTH+P*NSSSHHL
Sbjct: 504 RAHSLLDQMRSCTCIVGDQCRRGSTGVCIYHNSNCCLLLESRSILGGQTHYP*NSSSHHL 325
Query: 1035 QGPL**SESSFGVQSLDQL*VKQAASLTCQCTFPCPSGEMQ*FCRQQ*TDHGSQHMRCIF 1214
Q P **SESSF VQ DQL*VKQAASLTCQ TFPCPS EM * CRQQ*TDHGSQHM+C F
Sbjct: 324 QEPW**SESSFEVQCHDQL*VKQAASLTCQYTFPCPSREMP*SCRQQ*TDHGSQHMQCTF 145
Query: 1215 QYISC*SKYALFHPSTTQSHLXXXXXXXXXXXXPLPGDSQTQPH 1346
YISC KY LFH T Q HL P PGDSQT PH
Sbjct: 144 PYISCWLKYVLFHSLTIQGHLCSSSSQSIYQV*P*PGDSQTLPH 13
Score = 217 bits (468), Expect(2) = 2e-076
Identities = 97/105 (92%), Positives = 101/105 (96%)
Frame = +2 / -3
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 322 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 143
Query: 1217 VYLLLVKVCAISPIDHSESSLFFR*SIHLSGIAIARR*SNPTPPS 1351
VYLLLVKVCAI IDHS SSLFF+*SIHLSGIAIARR*SNPTPPS
Sbjct: 142 VYLLLVKVCAIPLIDHSRSSLFFK*SIHLSGIAIARR*SNPTPPS 8
Score = 91.3 bits (193), Expect(2) = 2e-076
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = +2 / -3
Query: 854 SSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHSG 991
SSAFIA SNAFMYLYR+*S+STRLH RLHLS*LQL PSLGKSIHSG
Sbjct: 505 SSAFIA*SNAFMYLYRR*SMSTRLHWRLHLS*LQLLPSLGKSIHSG 368
>gb|BM441607.2|BM441607 EBed07_SQ001_A14_R endosperm, 28 DPA, no treatment, cv Optic, EBed07
Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_A14 5', mRNA sequence
Length = 638
Score = 403 bits (874), Expect = e-111
Identities = 160/191 (83%), Positives = 172/191 (90%)
Frame = -2 / +2
Query: 1800 LGLRVLMDVVHSHASNNVTDGLNGYDVGQSTQESYFHAGDRGYHKLWDSRLFNYANWEVL 1621
LGLRVLMDVVHSHAS NVTDGLNGYDVGQS QESYF GDRGYHKLWDSRLFNY NWEVL
Sbjct: 2 LGLRVLMDVVHSHASKNVTDGLNGYDVGQSAQESYFCTGDRGYHKLWDSRLFNYTNWEVL 181
Query: 1620 RFLLSNLRYWLDEFMFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDAVVYMML 1441
RFLLSNLRYW+DEFMFDGFRFDGVTSMLY+HHGIN+ FTGNY+EYF LDT VDA++YMML
Sbjct: 182 RFLLSNLRYWMDEFMFDGFRFDGVTSMLYNHHGINMTFTGNYKEYFGLDTNVDAIIYMML 361
Query: 1440 ANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDSEW 1261
ANHL+HKLLPEAT++AEDVSGMP+LC+ VDEGGVGFDYR AMAIPDR IDY KNKD E
Sbjct: 362 ANHLIHKLLPEATIIAEDVSGMPILCQLVDEGGVGFDYRQAMAIPDRLIDYFKNKDAHEL 541
Query: 1260 SMGEIAHTLTN 1228
M I+ TLTN
Sbjct: 542 PMSGISQTLTN 574
Score = 238 bits (514), Expect = 1e-061
Identities = 120/189 (63%), Positives = 132/189 (69%)
Frame = -3 / +3
Query: 1793 CEF*WMLSIAMQVIMSQMV*MAMMLDKAPKSPIFMREIEVIINFGIVGCSTMLTGRY*GF 1614
C +*WMLSIAMQ M +MV*MAMMLDKA KS IF +E IIN GI CST+ GRY*GF
Sbjct: 9 CVY*WMLSIAMQAKM*RMV*MAMMLDKAHKSHIFAQETGAIINCGIAVCSTIRIGRY*GF 188
Query: 1613 FFLT*DIGWMNSCLMASDLMELHQCCIITMVSMWGLLETTRNISVWTQLWMQLFT*CLQT 1434
FF *DIGWMNSCL ASDLM LH C ITM S+ LE R+I VW + MQLFT*C T
Sbjct: 189 FFPI*DIGWMNSCLTASDLMGLHPCYTITMASI*RSLEIIRSILVWIPMLMQLFT*CWLT 368
Query: 1433 I*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQWLSLIDGLTT*RIKMTLSGRW 1254
I* TNSCQKQLLL KMF AC+ F LMKV GLTIA WL ID TT R KM ++ +
Sbjct: 369 I*YTNSCQKQLLLQKMFLACQFFVSWLMKVE*GLTIARLWLFQID*STTLRTKMPMNYQ* 548
Query: 1253 VK*RIL*LT 1227
V+ L*LT
Sbjct: 549 VEYHRL*LT 575
Score = 237 bits (513), Expect = 2e-061
Identities = 106/180 (58%), Positives = 131/180 (72%)
Frame = +1 / -2
Query: 1183 IMALSICDAFFSISPVSQSMRYFTHRPLRVIFILQVVNPSIRDSHCQAIVKPNPTFINWP 1362
++ I + + VSQS+ Y TH IF+L+VV+ SI +SH AIVKP TFIN
Sbjct: 619 LLCSHIFNCILIFTHVSQSL*YSTHW*FMGIFVLKVVDQSIWNSHSLAIVKPYSTFINQL 440
Query: 1363 AKDRHA*NIFSNNSCFWQEFVH*MVCKHHVNNCIHSCVQTEIFLVVSSKPHIDTMVMIQH 1542
K+ HA NIF NNSCFWQEFV+*MV +HHVNNCI+ +QT+I L++SS+ HID MV++ H
Sbjct: 439 TKNWHARNIFCNNSCFWQEFVY*MVSQHHVNNCINIGIQTKILLIISSERHIDAMVIV*H 260
Query: 1543 *CNSIKSEAIKHEFIQPISQVRKKKP*YLPVSIVEQPTIPKFMITSISRMKIGLLGALSN 1722
CN IKSEA+KHEFI PISQ+ KKKP*YLP+ IVEQ IP+FMI +S KI LL ALSN
Sbjct: 259 GCNPIKSEAVKHEFIHPISQIGKKKP*YLPIRIVEQTAIPQFMIAPVSCAKI*LLCALSN 80
Score = 236 bits (509), Expect = 6e-061
Identities = 115/193 (59%), Positives = 130/193 (67%)
Frame = -1 / +1
Query: 1801 FGFASSDGCCP*PCK**CHRWFKWL*CWTKHPRVLFSCGR*RLS*TLG*SAVQLC*LGGI 1622
F A ++GCCP*PCK C W KWL*CWTK RV+F R LS*T+G* +VQL LGGI
Sbjct: 1 FRIACTNGCCP*PCKQKCDGWSKWL*CWTKRTRVIFLHRRQGLS*TVG*PSVQLYELGGI 180
Query: 1621 KVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWYQCGVYWKLPGIFQFGHSCGCSCLHDA 1442
KVSSF EIL G*IHV* L I*W YI+A+ SPW+Q V+WKL G+F FG+ C C+ LHD
Sbjct: 181 KVSSFQSEILDG*IHV*RLQI*WGYIHAIQSPWHQYDVHWKL*GVFWFGYQC*CNYLHDV 360
Query: 1441 CKPFNAQTLARSNCCC*RCFRHAGPLPAS**RWGWV*LSPGNGYP**MD*LPEE*R*L*V 1262
PFN QT ARSN C RCF HA L A **RW V*LSPG GY *+D L E R *+
Sbjct: 361 G*PFNTQTPARSNYYCRRCFWHANSLSAG**RWSRV*LSPGYGYSR*IDRLL*EQRCP*I 540
Query: 1261 VDG*NSAYFD*QE 1223
+ N FD* E
Sbjct: 541 TNEWNITDFD*HE 579
Score = 225 bits (485), Expect(2) = 2e-073
Identities = 106/140 (75%), Positives = 115/140 (82%)
Frame = +2 / -3
Query: 1223 LLLVKVCAISPIDHSESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATT 1402
L+LVKVC I I +S +SLF +*SI+LSGIAIA R*SNPTPPSST QR GMPETSSA
Sbjct: 579 LMLVKVCDIPLIGNSWASLFLK*SINLSGIAIAWR*SNPTPPSSTS*QRIGMPETSSAII 400
Query: 1403 VASGKSLCIKWFASIM*TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMN 1582
VASG+SLCIKW A+IM* AST VSK KYS *FPVN L+PW* YS+DVTPSN KPSNMN
Sbjct: 399 VASGRSLCIKWLANIM*IIASTLVSKPKYSL*FPVNVILMPW*LYSMDVTPSNLKPSNMN 220
Query: 1583 SSNQYLRLERRNLNTSQLA* 1642
SS QYLRLERRNLNTSQ *
Sbjct: 219 SSIQYLRLERRNLNTSQFV* 160
Score = 162 bits (348), Expect = 1e-038
Identities = 87/165 (52%), Positives = 95/165 (57%)
Frame = +3 / -1
Query: 1224 SC*SKYALFHPSTTQSHLXXXXXXXXXXXXPLPGDSQTQPHLHQLAGKGPACLKHXXXXX 1403
SC*SK +FH HL P PGDSQT HLHQ A K AC KH
Sbjct: 578 SC*SKSVIFHSLVIHGHLCS*SSRSIYLE*P*PGDSQTLLHLHQPADKELACQKHLLQ** 399
Query: 1404 XXXARVCALNGLQASCKQLHPQLCPN*NIPGSFQ*TPH*YHGDDTALM*LHQIGSHQT*I 1583
A VC LNG SCK LH PN N P +FQ*T +* HGD A M* HQI S QT*I
Sbjct: 398 LLLAGVCVLNG*PTSCK*LHQHWYPNQNTPYNFQ*TSY*CHGDCIAWM*PHQI*SRQT*I 219
Query: 1584 HPTNISG*KEETLIPPS*HS*TADYPKVYDNLYLPHENRTLGCFV 1718
HP+NIS KEETLIPP+ +S*T YP VYD+ L +N TL FV
Sbjct: 218 HPSNISDWKEETLIPPNSYS*TDGYPTVYDSPCLLCKNMTLVRFV 84
Score = 73.5 bits (154), Expect(2) = 2e-073
Identities = 30/39 (76%), Positives = 31/39 (79%)
Frame = +2 / -3
Query: 1685 PA*K*DSWVLCPTS*PFKPSVTLLLAWLWTTSIRTRKPK 1801
P K DS LCPTS*PF+PSVT LLAWLWTTSI TR PK
Sbjct: 117 PVQKYDSCALCPTS*PFRPSVTFLLAWLWTTSISTRNPK 1
>gb|BU968118.1|BU968118 HB06H16r BC Hordeum vulgare subsp. vulgare cDNA clone HB06H16
5-PRIME, mRNA sequence
Length = 498
Score = 402 bits (872), Expect = e-111
Identities = 159/164 (96%), Positives = 160/164 (97%)
Frame = -2 / +1
Query: 1350 EGGVGFDYRLAMAIPDRWIDYLKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIV 1171
EGGVGFDYRLAMAIPDRWIDYLKNKDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIV
Sbjct: 7 EGGVGFDYRLAMAIPDRWIDYLKNKDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIV 186
Query: 1170 GDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGH 991
GDKT+AFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGH
Sbjct: 187 GDKTMAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGH 366
Query: 990 PEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNA 859
PEWIDFPREGNNWSYDKCRRQWSLVD DHLRYKYMNAFDQAMNA
Sbjct: 367 PEWIDFPREGNNWSYDKCRRQWSLVDIDHLRYKYMNAFDQAMNA 498
Score = 294 bits (637), Expect = 1e-078
Identities = 125/165 (75%), Positives = 141/165 (85%)
Frame = +1 / -1
Query: 859 RIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKVNPFWVTKLISHKIQVAITSK 1038
RIH L+K +HVLV VI+V +APL+SAFII P+V FSWKV+PFWV KLI+HKIQVAITSK
Sbjct: 498 RIHCLIKCVHVLVS*VINVDEAPLASAFIITPIVAFSWKVDPFWVAKLITHKIQVAITSK 319
Query: 1039 GHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALSICDAFFS 1218
H DEVNHLL+CN +INCR*SRLQV*HAS+HFLVHQEKC+S VANNRLIMALSIC+A F
Sbjct: 318 SHGDEVNHLLKCNATINCR*SRLQV*HASIHFLVHQEKCHSLVANNRLIMALSICNALFR 139
Query: 1219 ISPVSQSMRYFTHRPLRVIFILQVVNPSIRDSHCQAIVKPNPTFI 1353
ISPV SM Y TH P +VIF+LQVVNPSIR SH QAIVKP PT +
Sbjct: 138 ISPVG*SMCYSTH*PFKVIFVLQVVNPSIRYSHSQAIVKPYPTLV 4
Score = 272 bits (588), Expect = 8e-072
Identities = 123/162 (75%), Positives = 134/162 (82%)
Frame = -1 / +3
Query: 1345 WGWV*LSPGNGYP**MD*LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWR 1166
WG V*LSPG GY **MD*L EE R* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWR
Sbjct: 12 WGRV*LSPGYGYT**MD*LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWR 191
Query: 1165 QNYCISPDGQGNVHWHVRLAACFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPR 986
Q+Y IS DGQGNV+WHVRLAACFTYN*S CT KDDSLHH+G WR*WLLEFYG *VW PR
Sbjct: 192 QDYGISLDGQGNVYWHVRLAACFTYN*SWHCTSKDDSLHHHGSWR*WLLEFYG**VWPPR 371
Query: 985 MD*LSKRREQLEL**MQTTVEPCGH*SLAVQVHECV*PSDEC 860
MD LSKRR+QLEL**MQT VEP H*S +QVHE +* S+EC
Sbjct: 372 MDRLSKRRQQLEL**MQTPVEPRRH*SPTIQVHERI*SSNEC 497
Score = 268 bits (579), Expect = 1e-070
Identities = 126/163 (77%), Positives = 133/163 (81%)
Frame = -3 / +2
Query: 1349 KVGLGLTIAWQWLSLIDGLTT*RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLL 1170
+VG GLTIAW WL LIDGLTT*R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLL
Sbjct: 8 RVG*GLTIAWLWLYLIDGLTT*RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLL 187
Query: 1169 ATKLLHFS*WTRKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVT 990
AT+L HFS*WTRKC LACQTCSLLHLQLI LH KR*FTSS W LEVMAT*ILW MSL T
Sbjct: 188 ATRLWHFS*WTRKCILACQTCSLLHLQLIVALHFKR*FTSSPWLLEVMAT*ILWVMSLAT 367
Query: 989 QNGLTFQEKGTTGAMINADDSGALWTLITCGTST*MRLTKR*M 861
QNG TFQEK T G MINAD SGA TLIT TST* L K+*M
Sbjct: 368 QNGSTFQEKATIGVMINADASGASSTLITYDTST*THLIKQ*M 496
Score = 231 bits (498), Expect = 2e-059
Identities = 103/162 (63%), Positives = 106/162 (65%)
Frame = +3 / -3
Query: 861 HSSLGQTHSCTCTASDQCPQGSTVVCIYHXXXXXXXXXXXXXXGDQTHFP*NSSSHHLQG 1040
HS L Q SCTC DQC +GST VCIYH G QTH+P*NSSSHHLQ
Sbjct: 496 HSLLDQMRSCTCIVGDQCRRGSTGVCIYHNSNCCLLLESRSILGGQTHYP*NSSSHHLQE 317
Query: 1041 PL**SESSFGVQSLDQL*VKQAASLTCQCTFPCPSGEMQ*FCRQQ*TDHGSQHMRCIFQY 1220
P **SESSF VQ DQL*VKQAASLTCQ TFPCPS EM * CRQQ*TDHGSQHM+C F Y
Sbjct: 316 PW**SESSFEVQCHDQL*VKQAASLTCQYTFPCPSREMP*SCRQQ*TDHGSQHMQCTFPY 137
Query: 1221 ISC*SKYALFHPSTTQSHLXXXXXXXXXXXXPLPGDSQTQPH 1346
ISC KY LFH T Q HL P PGDSQT PH
Sbjct: 136 ISCWLKYVLFHSLTIQGHLCSSSSQSIYQV*P*PGDSQTLPH 11
Score = 217 bits (468), Expect(2) = 2e-075
Identities = 97/105 (92%), Positives = 101/105 (96%)
Frame = +2 / -2
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 320 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 141
Query: 1217 VYLLLVKVCAISPIDHSESSLFFR*SIHLSGIAIARR*SNPTPPS 1351
VYLLLVKVCAI IDHS SSLFF+*SIHLSGIAIARR*SNPTPPS
Sbjct: 140 VYLLLVKVCAIPLIDHSRSSLFFK*SIHLSGIAIARR*SNPTPPS 6
Score = 87.7 bits (185), Expect(2) = 2e-075
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +2 / -2
Query: 860 AFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHSG 991
AFIA SNAFMYLYR+*S+STRLH RLHLS*LQL PSLGKSIHSG
Sbjct: 497 AFIA*SNAFMYLYRR*SMSTRLHWRLHLS*LQLLPSLGKSIHSG 366
>gb|BU971976.1|BU971976 HB20D20r BC Hordeum vulgare subsp. vulgare cDNA clone HB20D20
5-PRIME, mRNA sequence
Length = 515
Score = 398 bits (863), Expect = e-110
Identities = 159/168 (94%), Positives = 164/168 (97%)
Frame = -2 / +3
Query: 1290 YLKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSD 1111
YLKNKDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIVGDKT+AFLLMDKEMYTGMSD
Sbjct: 12 YLKNKDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIVGDKTMAFLLMDKEMYTGMSD 191
Query: 1110 LQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRR 931
LQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRR
Sbjct: 192 LQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRR 371
Query: 930 QWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKV 787
QWSLVD DHLRYKYMNAFDQAMNALD++FSFLSSSKQIVSDMN+E+KV
Sbjct: 372 QWSLVDIDHLRYKYMNAFDQAMNALDDKFSFLSSSKQIVSDMNEEKKV 515
Score = 285 bits (616), Expect = 1e-075
Identities = 122/170 (71%), Positives = 143/170 (84%)
Frame = +1 / -1
Query: 787 NLFLIVHVADDLL*RRKEGKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPF 966
NL ++HVAD+LL* EGK ++ERIH L+K +HVLV VI+V +APL+SAFII P+V F
Sbjct: 515 NLLFLIHVADNLL****EGKFVVERIHCLIKCVHVLVS*VINVDEAPLASAFIITPIVAF 336
Query: 967 SWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQ 1146
SWKV+PFWV KLI+HKIQVAITSK H DEVNHLL+CN +INCR*SRLQV*HAS+HFLVHQ
Sbjct: 335 SWKVDPFWVAKLITHKIQVAITSKSHGDEVNHLLKCNATINCR*SRLQV*HASIHFLVHQ 156
Query: 1147 EKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRPLRVIFILQVVN 1296
EKC+S VANNRLIMALSIC+A F ISPV SM Y TH P +VIF+LQV +
Sbjct: 155 EKCHSLVANNRLIMALSICNALFRISPVG*SMCYSTH*PFKVIFVLQVAS 6
Score = 274 bits (593), Expect = 2e-072
Identities = 121/163 (74%), Positives = 135/163 (82%)
Frame = -1 / +2
Query: 1291 LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDGQGNVHWHVR 1112
L EE R* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWRQ+Y IS DGQGNV+WHVR
Sbjct: 11 LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWRQDYGISLDGQGNVYWHVR 190
Query: 1111 LAACFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD*LSKRREQLEL**MQT 932
LAACFTYN*S CT KDDSLHH+G WR*WLLEFYG *VW PRMD LSKRR+QLEL**MQT
Sbjct: 191 LAACFTYN*SWHCTSKDDSLHHHGSWR*WLLEFYG**VWPPRMDRLSKRRQQLEL**MQT 370
Query: 931 TVEPCGH*SLAVQVHECV*PSDECAR*EIFLPFVVKADRQRHE 803
VEP H*S +QVHE +* S+ECAR +IFLP ++KAD QRHE
Sbjct: 371 PVEPRRH*SPTIQVHERI*SSNECARRQIFLPIIIKADCQRHE 499
Score = 258 bits (558), Expect = 1e-067
Identities = 123/167 (73%), Positives = 133/167 (79%)
Frame = -3 / +1
Query: 1289 T*RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLLATKLLHFS*WTRKCTLACQT 1110
T*R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLLAT+L HFS*WTRKC LACQT
Sbjct: 13 T*RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLLATRLWHFS*WTRKCILACQT 192
Query: 1109 CSLLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVTQNGLTFQEKGTTGAMINADD 930
CSLLHLQLI LH KR*FTSS W LEVMAT*ILW MSL TQNG TFQEK T G MINAD
Sbjct: 193 CSLLHLQLIVALHFKR*FTSSPWLLEVMAT*ILWVMSLATQNGSTFQEKATIGVMINADA 372
Query: 929 SGALWTLITCGTST*MRLTKR*MRSMRDFPSFRRQSRSSAT*TMRKR 789
SGA TLIT TST* L K+*MRS +FPS+ QSR SAT* ++R
Sbjct: 373 SGASSTLITYDTST*THLIKQ*MRSTTNFPSYHHQSRLSAT*MRKRR 513
Score = 238 bits (515), Expect = 9e-062
Identities = 107/158 (67%), Positives = 111/158 (70%)
Frame = +3 / -3
Query: 804 SCR*RSALTTKGRKISHRAHSSLGQTHSCTCTASDQCPQGSTVVCIYHXXXXXXXXXXXX 983
SCR*+SAL GRKI RAHS L Q SCTC DQC +GST VCIYH
Sbjct: 498 SCR*QSALMMIGRKICRRAHSLLDQMRSCTCIVGDQCRRGSTGVCIYHNSNCCLLLESRS 319
Query: 984 XXGDQTHFP*NSSSHHLQGPL**SESSFGVQSLDQL*VKQAASLTCQCTFPCPSGEMQ*F 1163
G QTH+P*NSSSHHLQ P **SESSF VQ DQL*VKQAASLTCQ TFPCPS EM *
Sbjct: 318 ILGGQTHYP*NSSSHHLQEPW**SESSFEVQCHDQL*VKQAASLTCQYTFPCPSREMP*S 139
Query: 1164 CRQQ*TDHGSQHMRCIFQYISC*SKYALFHPSTTQSHL 1277
CRQQ*TDHGSQHM+C F YISC KY LFH T Q HL
Sbjct: 138 CRQQ*TDHGSQHMQCTFPYISCWLKYVLFHSLTIQGHL 25
Score = 172 bits (371), Expect(2) = 3e-077
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +2 / -2
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 265 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 86
Query: 1217 VYLLLVKVCAISPIDHSESSLFFR* 1291
VYLLLVKVCAI IDHS SSLFF+*
Sbjct: 85 VYLLLVKVCAIPLIDHSRSSLFFK* 11
Score = 138 bits (296), Expect(2) = 3e-077
Identities = 61/68 (89%), Positives = 64/68 (94%)
Frame = +2 / -2
Query: 788 TFSSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPS 967
TF SSFMSLTICFDD+RKENLSSSAFIA SNAFMYLYR+*S+STRLH RLHLS*LQL PS
Sbjct: 514 TFFSSFMSLTICFDDDRKENLSSSAFIA*SNAFMYLYRR*SMSTRLHWRLHLS*LQLLPS 335
Query: 968 LGKSIHSG 991
LGKSIHSG
Sbjct: 334 LGKSIHSG 311
>gb|BG416474.1|BG416474 HVSMEk0012G24f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0012G24f, mRNA sequence
Length = 804
Score = 366 bits (793), Expect(2) = e-108
Identities = 142/158 (89%), Positives = 152/158 (96%)
Frame = -2 / +3
Query: 1137 KEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPREGN 958
+ MYTG+SDLQPASPT DRG+AL KMIHFITMALGGDGYLNFMGNEFGHPEWID+PREGN
Sbjct: 18 RNMYTGLSDLQPASPTSDRGVALHKMIHFITMALGGDGYLNFMGNEFGHPEWIDYPREGN 197
Query: 957 NWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVIVF 778
NWSYDKCRRQWSLVD DHLRYKYMNAFDQAMNALD++FSFLSSSKQIVSDMN+E+KVIVF
Sbjct: 198 NWSYDKCRRQWSLVDIDHLRYKYMNAFDQAMNALDDKFSFLSSSKQIVSDMNEEKKVIVF 377
Query: 777 ERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDA 664
ERGDLVFVFN HP KTY+GYKVGCDLPGKY+VALDSDA
Sbjct: 378 ERGDLVFVFNSHPNKTYDGYKVGCDLPGKYKVALDSDA 491
Score = 257 bits (555), Expect(2) = 1e-070
Identities = 114/171 (66%), Positives = 128/171 (74%)
Frame = -1 / +2
Query: 1129 VHWHVRLAACFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD*LSKRREQLE 950
V+W VRLAACFTY S CT +DDSLHH+G WR*WLLEFYG *VW PRMD LSKRR+QLE
Sbjct: 26 VYWPVRLAACFTYKRSWRCTSQDDSLHHHGSWR*WLLEFYG**VWPPRMDRLSKRRQQLE 205
Query: 949 L**MQTTVEPCGH*SLAVQVHECV*PSDECAR*EIFLPFVVKADRQRHER*GKGYCL*TW 770
L**MQT VEP H*S +QVHE +* S+ECAR +IFLP ++KAD QRHE +GYC+*TW
Sbjct: 206 L**MQTPVEPRRH*SPTIQVHERI*SSNECARRQIFLPIIIKADCQRHE*GKEGYCI*TW 385
Query: 769 RFSFCFQFPSQENLRGLQSGMRFAWEIQSSPGL*CSGLRWTWKSWPRRGSL 617
R F QFPSQ NL LQS M AWE+Q S GL C + WTW S P GSL
Sbjct: 386 RSGFRLQFPSQ*NL*WLQSRM*LAWEVQGSSGLRCFDVWWTW*SGP*LGSL 538
Score = 251 bits (543), Expect = 1e-065
Identities = 109/171 (63%), Positives = 137/171 (80%)
Frame = +1 / -2
Query: 619 VIHVVANSSMSTEDQSIRVQGYSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFL 798
VI V+ +S+MST+ +SI VQ Y V PRQ+ S FV ++ F+GM IE++N ISTFK NNL
Sbjct: 536 VIRVMGHSTMSTKHRSIGVQSYLVLPRQVTSDFVTIIGFIGMGIEDENQISTFKYNNLLF 357
Query: 799 IVHVADDLL*RRKEGKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKV 978
++HVAD+LL* EGK ++ERIH L+K +HVLV VI+V +APL+SAFII P+V FSW V
Sbjct: 356 LIHVADNLL****EGKFVVERIHCLIKCVHVLVS*VINVDEAPLASAFIITPIVAFSWIV 177
Query: 979 NPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVH 1131
+PFWV KLI+HKIQVAITSK H DEVNHL++CN +I CR*SRLQV* AS+H
Sbjct: 176 DPFWVAKLITHKIQVAITSKSHGDEVNHLVKCNATIACR*SRLQV*QASIH 24
Score = 246 bits (531), Expect(3) = 4e-078
Identities = 107/124 (86%), Positives = 112/124 (90%)
Frame = +2 / -3
Query: 620 *STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITFSS 799
*S SW TLPCPP ASESRATLYFPGKSHPTL*PS*V LGW+LKTKT+SPRS TITF S
Sbjct: 535 *SESWATLPCPPNIEASESRATLYFPGKSHPTL*PS*VLLGWELKTKTRSPRSNTITFFS 356
Query: 800 SFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKS 979
SFMSLTICFDD+RKENLSSSAFIA SNAFMYLYR+*S+STRLH RLHLS*LQL PSLG S
Sbjct: 355 SFMSLTICFDDDRKENLSSSAFIA*SNAFMYLYRR*SMSTRLHWRLHLS*LQLLPSLG*S 176
Query: 980 IHSG 991
IHSG
Sbjct: 175 IHSG 164
Score = 222 bits (479), Expect = 8e-057
Identities = 111/172 (64%), Positives = 118/172 (68%)
Frame = -3 / +1
Query: 1130 CTLACQTCSLLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVTQNGLTFQEKGTTG 951
C LACQTCSLLHLQ I LH R*FTSS W LEVMAT*ILW MSL TQNG T QEK T G
Sbjct: 25 CILACQTCSLLHLQAIVALHFTR*FTSSPWLLEVMAT*ILWVMSLATQNGSTIQEKATIG 204
Query: 950 AMINADDSGALWTLITCGTST*MRLTKR*MRSMRDFPSFRRQSRSSAT*TMRKRLLSLNV 771
MINAD SGA TLIT TST* L K+*MRS +FPS+ QSR SAT* ++RLL LNV
Sbjct: 205 VMINADASGASSTLITYDTST*THLIKQ*MRSTTNFPSYHHQSRLSAT*MRKRRLLYLNV 384
Query: 770 EI*FLFSISIPRKLTRATKWDAICLGNTE*PWTLMLWSSVDMEELATTWITS 615
EI F SI IP K TK D CLG+T * WT ML VDM E T IT+
Sbjct: 385 EIWFSSSIPIPIKPMMVTKSDVTCLGSTR*LWTPMLRCLVDMVEWPMTRITN 540
Score = 218 bits (471), Expect = 1e-055
Identities = 101/172 (58%), Positives = 116/172 (67%)
Frame = +3 / -1
Query: 618 SDPRRGQLFHVHRRPEHQSPGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFP 797
SDP G L+HVH+ +H+SP L C SQA+ I LC+ +F WDGN*++K +LHVQ Q*P
Sbjct: 537 SDPSHGPLYHVHQTSKHRSPELPCTSQASHIRLCNHHRFYWDGN*RRKPDLHVQIQ*PSF 358
Query: 798 HRSCR*RSALTTKGRKISHRAHSSLGQTHSCTCTASDQCPQGSTVVCIYHXXXXXXXXXX 977
SCR*+SAL GRKI RAHS L Q SCTC DQC +GST VCIYH
Sbjct: 357 PHSCR*QSALMMIGRKICRRAHSLLDQMRSCTCIVGDQCRRGSTGVCIYHNSNCCLLLDS 178
Query: 978 XXXXGDQTHFP*NSSSHHLQGPL**SESSFGVQSLDQL*VKQAASLTCQCTF 1133
G QTH+P*NSSSHHLQ P **SESS VQ D+L*VKQAASLT Q T+
Sbjct: 177 RSILGGQTHYP*NSSSHHLQEPW**SESSCEVQRHDRL*VKQAASLTGQYTY 22
Score = 60.6 bits (126), Expect(3) = 4e-078
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2 / -3
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISL 1138
RA+VMK*II SA PRS+VGEAGCKSD PVYI L
Sbjct: 118 RAMVMK*IIL*SATPRSLVGEAGCKSDRPVYIFL 17
Score = 49.2 bits (101), Expect(2) = e-108
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / +2
Query: 573 NNRPNSFKVLSPPRTCVAYYRVDE 502
NNRPNSFK L+ PRTCVAYY V+E
Sbjct: 578 NNRPNSFKNLTLPRTCVAYYPVEE 649
Score = 32.2 bits (64), Expect(2) = 1e-070
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1 / +1
Query: 580 ELQQPAELVQSPFSAPHLCGLLPCR 506
+ QQP L+Q S +LCGLL CR
Sbjct: 571 QTQQPP*LIQKLDSTSYLCGLLSCR 645
Score = 26.3 bits (51), Expect(3) = 4e-078
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -1
Query: 527 QVRGGERTLNEFGRLLKFV 583
QVRG + LNE GRLL +
Sbjct: 624 QVRGRVKFLNELGRLLSLL 568
>gb|BG366769.1|BG366769 HVSMEi0008D20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008D20f, mRNA sequence
Length = 494
Score = 386 bits (837), Expect = e-106
Identities = 157/164 (95%), Positives = 159/164 (96%)
Frame = -2 / +2
Query: 1464 DAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYL 1285
DAVVYMMLANHLMHKLLPEATVVAEDVS MPVLCR VDEGGVGFDYRLAMAIPDRWIDYL
Sbjct: 2 DAVVYMMLANHLMHKLLPEATVVAEDVSSMPVLCRSVDEGGVGFDYRLAMAIPDRWIDYL 181
Query: 1284 KNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQ 1105
KNKDD EWSM IAHTLTNRRYTEKCIAYAESHDQSIVGDKT+AFLLMDKEMYTGMSDLQ
Sbjct: 182 KNKDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIVGDKTMAFLLMDKEMYTGMSDLQ 361
Query: 1104 PASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDF 973
PASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHP+WIDF
Sbjct: 362 PASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPKWIDF 493
Score = 314 bits (679), Expect = 2e-084
Identities = 132/164 (80%), Positives = 142/164 (86%)
Frame = +1 / -2
Query: 973 KVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQEK 1152
KV+PFWV KLI+HKIQVAITSK H DEVNHLL+CN +INCR*SRLQV*HAS+HFLVHQEK
Sbjct: 493 KVDPFWVAKLITHKIQVAITSKSHGDEVNHLLKCNATINCR*SRLQV*HASIHFLVHQEK 314
Query: 1153 CNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRPLRVIFILQVVNPSIRDSHCQAIV 1332
C+S VANNRLIMALSIC+A F ISPV SM Y TH P +VIF+LQVVNPSIR SH QAIV
Sbjct: 313 CHSLVANNRLIMALSICNALFRISPVG*SMCYSTH*PFKVIFVLQVVNPSIRYSHSQAIV 134
Query: 1333 KPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKHHVNNCI 1464
KP PTFIN P K HA*NIF NNSCFWQEFVH*MV +HHVNNCI
Sbjct: 133 KPYPTFIN*PTKHWHA*NIFRNNSCFWQEFVH*MVREHHVNNCI 2
Score = 297 bits (643), Expect = 2e-079
Identities = 134/164 (81%), Positives = 141/164 (85%)
Frame = -3 / +3
Query: 1463 MQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQWLSLIDGLTT* 1284
MQLFT*C +TI*CTNSCQKQLLL KMFQAC+ F GQLMKVG GLTIAW WL LIDGLTT*
Sbjct: 3 MQLFT*CSRTI*CTNSCQKQLLLRKMFQACQCFVGQLMKVG*GLTIAWLWLYLIDGLTT* 182
Query: 1283 RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLLATKLLHFS*WTRKCTLACQTCS 1104
R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLLAT+L HFS*WTRKC LACQTCS
Sbjct: 183 RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLLATRLWHFS*WTRKCILACQTCS 362
Query: 1103 LLHLQLIEGLHSKR*FTSSQWPLEVMAT*ILWEMSLVTQNGLTF 972
LLHLQLI LH KR*FTSS W LEVMAT*ILW MSL TQNG TF
Sbjct: 363 LLHLQLIVALHFKR*FTSSPWLLEVMAT*ILWVMSLATQNGSTF 494
Score = 292 bits (633), Expect = 5e-078
Identities = 125/161 (77%), Positives = 135/161 (83%)
Frame = -1 / +1
Query: 1462 CSCLHDACKPFNAQTLARSNCCC*RCFRHAGPLPAS**RWGWV*LSPGNGYP**MD*LPE 1283
CSCLHDA +PFNAQTLARSNCCC RCF+HA L S**RWG V*LSPG GY **MD*L E
Sbjct: 4 CSCLHDAREPFNAQTLARSNCCCGRCFKHASALSVS**RWGRV*LSPGYGYT**MD*LLE 183
Query: 1282 E*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDGQGNVHWHVRLAA 1103
E R* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWRQ+Y IS DGQGNV+WHVRLAA
Sbjct: 184 EQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWRQDYGISLDGQGNVYWHVRLAA 363
Query: 1102 CFTYN*SRDCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD 980
CFTYN*S CT KDDSLHH+G WR*WLLEFYG *VW P+MD
Sbjct: 364 CFTYN*SWHCTSKDDSLHHHGSWR*WLLEFYG**VWPPKMD 486
Score = 292 bits (632), Expect = 6e-078
Identities = 132/143 (92%), Positives = 136/143 (95%)
Frame = +2 / -3
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 429 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 250
Query: 1217 VYLLLVKVCAISPIDHSESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSA 1396
VYLLLVKVCAI IDHS SSLFF+*SIHLSGIAIARR*SNPTPPSST RQ TGM ETSSA
Sbjct: 249 VYLLLVKVCAIPLIDHSRSSLFFK*SIHLSGIAIARR*SNPTPPSSTDRQSTGMLETSSA 70
Query: 1397 TTVASGKSLCIKWFASIM*TTAS 1465
TTVASGKSLCIKWFASIM*TTAS
Sbjct: 69 TTVASGKSLCIKWFASIM*TTAS 1
Score = 244 bits (528), Expect = 1e-063
Identities = 109/158 (68%), Positives = 112/158 (70%)
Frame = +3 / -1
Query: 990 GDQTHFP*NSSSHHLQGPL**SESSFGVQSLDQL*VKQAASLTCQCTFPCPSGEMQ*FCR 1169
G QTH+P*NSSSHHLQ P **SESSF VQ DQL*VKQAASLTCQ TFPCPS EM * CR
Sbjct: 476 GGQTHYP*NSSSHHLQEPW**SESSFEVQCHDQL*VKQAASLTCQYTFPCPSREMP*SCR 297
Query: 1170 QQ*TDHGSQHMRCIFQYISC*SKYALFHPSTTQSHLXXXXXXXXXXXXPLPGDSQTQPHL 1349
QQ*TDHGSQHM+C F YISC KY LFH T Q HL P PGDSQT PHL
Sbjct: 296 QQ*TDHGSQHMQCTFPYISCWLKYVLFHSLTIQGHLCSSSSQSIYQV*P*PGDSQTLPHL 117
Query: 1350 HQLAGKGPACLKHXXXXXXXXARVCALNGLQASCKQLH 1463
HQL K ACLKH ARVCALNG +ASCKQLH
Sbjct: 116 HQLTDKALACLKHLPQQQLLLARVCALNGSRASCKQLH 3
>gb|BQ472324.1|BQ472324 HB09O20T BC Hordeum vulgare subsp. vulgare cDNA clone HB09O20
5-PRIME, mRNA sequence
Length = 526
Score = 384 bits (832), Expect = e-105
Identities = 153/172 (88%), Positives = 163/172 (94%)
Frame = -2 / +1
Query: 1638 ANWEVLRFLLSNLRYWLDEFMFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDA 1459
ANWEVLRFLLSNLRYW+DEFMFDGFRFDGVTSMLY+HHGIN+ F+G ++EYF LDT VDA
Sbjct: 10 ANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSMLYNHHGINMSFSGFFKEYFGLDTDVDA 189
Query: 1458 VVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKN 1279
VVYMMLANHL++KLLPEAT+VAEDVSGMPVLCR VDEGGVGFDYRLAMAIPDRWIDYLKN
Sbjct: 190 VVYMMLANHLIYKLLPEATIVAEDVSGMPVLCRSVDEGGVGFDYRLAMAIPDRWIDYLKN 369
Query: 1278 KDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYT 1123
KDD EWSM IAHTLTNRRYTEKCIAYAESHDQSI GDKT+AFLLMDKEMYT
Sbjct: 370 KDDLEWSMSGIAHTLTNRRYTEKCIAYAESHDQSIAGDKTMAFLLMDKEMYT 525
Score = 324 bits (701), Expect = 2e-087
Identities = 149/172 (86%), Positives = 153/172 (88%)
Frame = +2 / -3
Query: 1124 VYISLSIRRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAISPIDHSESSLFFR*SIHL 1303
VYISLSI+RNAIVLSP ID*SWLSAYAMHFSVYLLLVKVCAI IDHS SSLFF+*SIHL
Sbjct: 524 VYISLSIKRNAIVLSPAID*SWLSAYAMHFSVYLLLVKVCAIPLIDHSRSSLFFK*SIHL 345
Query: 1304 SGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASIM*TTASTAVSKL 1483
SGIAIARR*SNPTPPSST RQ TGMPETSSAT VASGKSL IKWFASIM*TTAST+VSK
Sbjct: 344 SGIAIARR*SNPTPPSSTDRQSTGMPETSSATIVASGKSL*IKWFASIM*TTASTSVSKP 165
Query: 1484 KYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNTSQLA 1639
KYS P N LIPW* YS+DVTPSNRKPSNMNSS QYLRLERRN TSQLA
Sbjct: 164 KYSLKKPENDILIPW*LYSMDVTPSNRKPSNMNSSIQYLRLERRNRKTSQLA 9
Score = 291 bits (629), Expect = 2e-077
Identities = 125/174 (71%), Positives = 142/174 (81%)
Frame = +1 / -2
Query: 1123 SVHFLVHQEKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRPLRVIFILQVVNPS 1302
S+HFLVHQEKC+S VA+NRLIMALSIC+A F ISPV SM Y TH P +VIF+LQVVNPS
Sbjct: 525 SIHFLVHQEKCHSLVASNRLIMALSICNALFRISPVG*SMCYSTH*PFKVIFVLQVVNPS 346
Query: 1303 IRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKHHVNNCIHSCVQT 1482
IR SH QAIVKP PTFIN P K HA*NIF NNSCFWQEFV+*MV +HHVNNCI+ +QT
Sbjct: 345 IRYSHSQAIVKPYPTFIN*PTKHWHA*NIFRNNSCFWQEFVN*MVREHHVNNCIYISIQT 166
Query: 1483 EIFLVVSSKPHIDTMVMIQH*CNSIKSEAIKHEFIQPISQVRKKKP*YLPVSIV 1644
EIFL + + HIDTMV+I H C +KSEAIKHEF+ PISQ+RKKK * LPV +V
Sbjct: 165 EIFLEKTRE*HIDTMVII*HGCYPVKSEAIKHEFVHPISQIRKKKS*DLPVGLV 4
Score = 273 bits (591), Expect = 3e-072
Identities = 128/174 (73%), Positives = 138/174 (79%)
Frame = -3 / +2
Query: 1643 TMLTGRY*GFFFLT*DIGWMNSCLMASDLMELHQCCIITMVSMWGLLETTRNISVWTQLW 1464
T TGR FFFL *DIGW NSCLMASDL H C IITMVS+ L +RNISVW +
Sbjct: 5 TRPTGRSYDFFFLI*DIGWTNSCLMASDLTG*HPCYIITMVSICHSLVFSRNISVWILM* 184
Query: 1463 MQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQWLSLIDGLTT* 1284
MQLFT*C +TI* TNSCQKQLLL KMFQAC+ F GQLMKVG GLTIAW WL LIDGLTT*
Sbjct: 185 MQLFT*CSRTI*FTNSCQKQLLLRKMFQACQCFVGQLMKVG*GLTIAWLWLYLIDGLTT* 364
Query: 1283 RIKMTLSGRWVK*RIL*LTGDILKNASHMLRAMISLLLATKLLHFS*WTRKCTL 1122
R KMTL+G+ V+* IL* TGDI K+A HMLRAMISLLLAT+L HFS*WTRKC L
Sbjct: 365 RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRAMISLLLATRLWHFS*WTRKCIL 526
Score = 259 bits (560), Expect = 6e-068
Identities = 118/170 (69%), Positives = 132/170 (77%)
Frame = -1 / +3
Query: 1633 LGGIKVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWYQCGVYWKLPGIFQFGHSCGCSC 1454
LGG+ +SSF* EIL G IHV*WLPI* I+A+ SPWYQ + W GIF+FG+ C CSC
Sbjct: 15 LGGLTISSF*SEILDGRIHV*WLPI*RGNIHAI*SPWYQYVILWFFQGIFRFGY*CRCSC 194
Query: 1453 LHDACKPFNAQTLARSNCCC*RCFRHAGPLPAS**RWGWV*LSPGNGYP**MD*LPEE*R 1274
LHDA +PFN QTLARSN CC RCFRHA L S**RWG V*LSPG GY **MD*L EE R
Sbjct: 195 LHDAREPFNLQTLARSNYCCGRCFRHASALSVS**RWGRV*LSPGYGYT**MD*LLEEQR 374
Query: 1273 *L*VVDG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDGQGNVH 1124
* *+V+ NS YF+ QEIY K+H IC*EP*SVYCWRQ+Y IS DGQGNV+
Sbjct: 375 *P*MVNEWNSTYFNQQEIYGKVHCIC*EP*SVYCWRQDYGISLDGQGNVY 524
Score = 224 bits (483), Expect = 2e-057
Identities = 104/171 (60%), Positives = 109/171 (63%)
Frame = +3 / -1
Query: 1122 QCTFPCPSGEMQ*FCRQQ*TDHGSQHMRCIFQYISC*SKYALFHPSTTQSHLXXXXXXXX 1301
Q TFPCPS EM * CRQQ*TDHGSQHM+C F YISC KY LFH T Q HL
Sbjct: 526 QYTFPCPSREMP*SCRQQ*TDHGSQHMQCTFPYISCWLKYVLFHSLTIQGHLCSSSSQSI 347
Query: 1302 XXXXPLPGDSQTQPHLHQLAGKGPACLKHXXXXXXXXARVCALNGLQASCKQLHPQLCPN 1481
P PGDSQT PHLHQL K ACLKH ARVC LNG +ASCKQLH PN
Sbjct: 346 YQV*P*PGDSQTLPHLHQLTDKALACLKHLPQQ*LLLARVCKLNGSRASCKQLHLHQYPN 167
Query: 1482 *NIPGSFQ*TPH*YHGDDTALM*LHQIGSHQT*IHPTNISG*KEETLIPPS 1634
NIP Q +*YHGD A M QIGSHQT*I P+NIS *KEE + PPS
Sbjct: 166 RNIP*KNQRMTY*YHGDYIAWMLPRQIGSHQT*IRPSNISD*KEEIVRPPS 14
>gb|BE602527.2|BE602527 HVSMEh0099J22f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0099J22f, mRNA sequence
Length = 731
Score = 185 bits (399), Expect(3) = 8e-098
Identities = 73/102 (71%), Positives = 82/102 (80%)
Frame = -2 / +3
Query: 1272 DSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASP 1093
D W MG I HTLTNRR+ EKC+ YAESHDQ++VGDKTIAF LMDK+MY M+ P++P
Sbjct: 426 DEGWEMGNIVHTLTNRRWLEKCVTYAESHDQALVGDKTIAFWLMDKDMYDFMALNGPSTP 605
Query: 1092 TIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
IDRGIAL KMI ITMA GG+GYLNFMGNEF HPEWID PR
Sbjct: 606 NIDRGIALHKMIRLITMAXGGEGYLNFMGNEFRHPEWIDXPR 731
Score = 117 bits (250), Expect(3) = 8e-098
Identities = 46/77 (59%), Positives = 54/77 (70%)
Frame = -2 / +3
Query: 1500 NYQEYFSLDTAVDAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRL 1321
+Y EYF T VDAVVY+ML N L+H L PEA + EDVSGMP PV GGVGFDYRL
Sbjct: 201 SYHEYFGFATDVDAVVYLMLVNDLIHALYPEAVTIGEDVSGMPTFALPVQVGGVGFDYRL 380
Query: 1320 AMAIPDRWIDYLKNKDD 1270
MA+ D+WI+ LK D+
Sbjct: 381 HMAVADKWIELLKGSDE 431
Score = 101 bits (216), Expect(3) = 4e-049
Identities = 41/99 (41%), Positives = 58/99 (58%)
Frame = +1 / -1
Query: 967 SWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQ 1146
SW V PF + +LISHK+++ ++S HCD+ NH ++C +IN R R H +H LVHQ
Sbjct: 731 SWXVYPFRMPELISHKVKITLSSXSHCDKSNHFMQCYSAINIRCRRSVQSHEIIHILVHQ 552
Query: 1147 EKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRP 1263
+CNS V+N LIM SI + F + + TH P
Sbjct: 551 PECNSLVSNKCLIMTFSISNTLFQPPSIC*CVHNITHLP 435
Score = 95.9 bits (203), Expect(3) = 8e-098
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = -2 / +2
Query: 1695 FHAGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWLDEFMFDGFRFDGVTSMLYHHHGIN 1516
FH G RG+H +WDSR+FNY N EV+R LLSN R+ L+E+ F GF FDG T M+Y HG+
Sbjct: 8 FHGGSRGHHWMWDSRVFNYGNKEVIRVLLSNARWGLEEYKFHGFPFDGPTFMMYTPHGLQ 187
Query: 1515 V 1513
V
Sbjct: 188 V 190
Score = 94.5 bits (200), Expect(3) = 4e-049
Identities = 47/76 (61%), Positives = 53/76 (69%)
Frame = +2 / -2
Query: 1271 SSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASIM 1450
SSL R SIHLS AI +R*S PTPP+ TGR G+P TSS ASG S I+ F SI
Sbjct: 430 SSLPLRSSIHLSATAICKR*SKPTPPT*TGRANVGIPLTSSPIVTASGXSA*IRSFTSIK 251
Query: 1451 *TTASTAVSKLKYSW* 1498
*TTAST+V+K KYSW*
Sbjct: 250 *TTASTSVAKPKYSW* 203
Score = 84.5 bits (178), Expect(3) = 6e-031
Identities = 46/78 (58%), Positives = 50/78 (64%)
Frame = +2 / -2
Query: 1040 AIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFSV 1219
AIV+ II SAIPRSI+G G M YISLSI +NAIVLSPT *S LSA HFS
Sbjct: 658 AIVISLIILCSAIPRSILGVEGPFRAMKSYISLSINQNAIVLSPTSA*S*LSA*VTHFSN 479
Query: 1220 YLLLVKVCAISPIDHSES 1273
+LL V VC I PI S
Sbjct: 478 HLLFVSVCTILPISQPSS 425
Score = 68.9 bits (144), Expect(3) = 3e-023
Identities = 43/97 (44%), Positives = 56/97 (57%)
Frame = -1 / +2
Query: 1258 DG*NSAYFD*QEIY*KMHRIC*EP*SVYCWRQNYCISPDGQGNVHWHVRLAACFTYN*SR 1079
DG* A+ + ++ K+ +C*+ *S CWRQ+YCI DGQG V +H T *SR
Sbjct: 440 DG*YCAHTNK*KVVGKVCYLC*KS*SSTCWRQDYCILVDGQGYV*FHGSERTFDT*Y*SR 619
Query: 1078 DCTPKDDSLHHNGPWR*WLLEFYGK*VWSPRMD*LSK 968
+ T +D +HNG R L YGK*V + MD LSK
Sbjct: 620 NSTA*ND*TYHNGXRRRGLS*LYGK*VPAS*MDRLSK 730
Score = 67.5 bits (141), Expect(3) = 6e-031
Identities = 32/72 (44%), Positives = 46/72 (63%)
Frame = +1 / -1
Query: 1294 NPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKHHVNNCIHSC 1473
NP I + H AIVK NPT +N K RH+ NIF+N++ F V+*++ +H VNNCI+
Sbjct: 407 NPFIGNGHM*AIVKTNPTNLNRKGKCRHSTNIFTNSNGFRIXRVN*IIHQHQVNNCIYIR 228
Query: 1474 VQTEIFLVVSSK 1509
+ +IF+V K
Sbjct: 227 GKAKIFMVAPVK 192
Score = 51.9 bits (107), Expect(3) = 3e-023
Identities = 31/68 (45%), Positives = 36/68 (52%)
Frame = -3 / +1
Query: 1496 TRNISVWTQLWMQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQ 1317
T NI ++ MQLFT*C I* T K LLL+KM C VGL LTIA+
Sbjct: 205 TMNILALPRM*MQLFT*CW*MI*FTRXILKPLLLVKMLVECLHLPFLFKLVGLVLTIAYI 384
Query: 1316 WLSLIDGL 1293
W I+GL
Sbjct: 385 WPLPINGL 408
Score = 39.1 bits (79), Expect(3) = 4e-049
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2 / -3
Query: 1514 TLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNTS 1630
T PW Y + V PSN P N+ SS+ +L LE R L TS
Sbjct: 189 TCNPWGVYIMKVGPSNGNPWNLYSSSPHLALESRTLITS 73
Score = 27.2 bits (53), Expect(3) = 3e-023
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3 / +3
Query: 1694 FMREIEVIINFGIVGCSTMLTGRY*GFFFLT*DIGWMNSCLMAS 1563
FM I GI+ CST + *GF+F D G N M S
Sbjct: 9 FMAAHGAITGCGILVCSTTGIRKL*GFYFPMPDGGLRNISSMGS 140
Score = 22.1 bits (42), Expect(3) = 6e-031
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3 / -1
Query: 1524 HGDDTALM*LHQIGSHQT*IHPTNISG*KEETLIPPS*HS*TADYPKVYDNLYLPHE 1694
HG T+ ++G+H T I I K E L P S*T + P D HE
Sbjct: 179 HGGYTS*RWARRMGTHGTYIPQAPIWHWKVEPL*LPYSRS*THENPTSSDGPVSRHE 9
>gb|BU969303.1|BU969303 HB11C06r BC Hordeum vulgare subsp. vulgare cDNA clone HB11C06
5-PRIME, mRNA sequence
Length = 484
Score = 356 bits (772), Expect = 3e-097
Identities = 144/158 (91%), Positives = 151/158 (95%)
Frame = -2 / +2
Query: 1557 DGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDAVVYMMLANHLMHKLLPEATVVAEDVSG 1378
DGVTSMLY+HHGIN+ F+G+Y+EYF LDT VDAVVYMMLANHLMHKLLPEAT+VAEDVSG
Sbjct: 11 DGVTSMLYNHHGINMSFSGDYKEYFGLDTDVDAVVYMMLANHLMHKLLPEATIVAEDVSG 190
Query: 1377 MPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDSEWSMGEIAHTLTNRRYTEKCIAY 1198
MPVLCR VDEGGVGFDYRLAMAIPDRWIDYLKNKDD EWSM IAHTLTNRRYTEKCIAY
Sbjct: 191 MPVLCRSVDEGGVGFDYRLAMAIPDRWIDYLKNKDDLEWSMSGIAHTLTNRRYTEKCIAY 370
Query: 1197 AESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTID 1084
AESHDQSIVGDKT+AFLLMDKEMYTGMSDLQPASPTID
Sbjct: 371 AESHDQSIVGDKTMAFLLMDKEMYTGMSDLQPASPTID 484
Score = 314 bits (679), Expect = 2e-084
Identities = 141/158 (89%), Positives = 145/158 (91%)
Frame = +2 / -2
Query: 1085 SIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAISPIDH 1264
SIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAI IDH
Sbjct: 483 SIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAIPLIDH 304
Query: 1265 SESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFAS 1444
S SSLFF+*SIHLSGIAIARR*SNPTPPSST RQ TGMPETSSAT VASGKSLCIKWFAS
Sbjct: 303 SRSSLFFK*SIHLSGIAIARR*SNPTPPSSTDRQSTGMPETSSATIVASGKSLCIKWFAS 124
Query: 1445 IM*TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPS 1558
IM*TTAST+VSK KYS * P N LIPW* YS+DVTPS
Sbjct: 123 IM*TTASTSVSKPKYSL*SPENDILIPW*LYSMDVTPS 10
Score = 280 bits (605), Expect = 3e-074
Identities = 120/155 (77%), Positives = 131/155 (84%)
Frame = +1 / -1
Query: 1084 INCR*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRP 1263
INCR*SRLQV*HAS+HFLVHQEKC+S VANNRLIMALSIC+A F ISPV SM Y TH P
Sbjct: 484 INCR*SRLQV*HASIHFLVHQEKCHSLVANNRLIMALSICNALFRISPVG*SMCYSTH*P 305
Query: 1264 LRVIFILQVVNPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCK 1443
+VIF+LQVVNPSIR SH QAIVKP PTFIN P K HA*NIF NNSCFWQEFVH*MV +
Sbjct: 304 FKVIFVLQVVNPSIRYSHSQAIVKPYPTFIN*PTKHWHA*NIFRNNSCFWQEFVH*MVRE 125
Query: 1444 HHVNNCIHSCVQTEIFLVVSSKPHIDTMVMIQH*C 1548
HHVNNCI+ +QTEIFLV+S + HIDTMV+I H C
Sbjct: 124 HHVNNCIYISIQTEIFLVISRE*HIDTMVII*HGC 20
Score = 269 bits (582), Expect = 5e-071
Identities = 121/154 (78%), Positives = 130/154 (84%)
Frame = -3 / +3
Query: 1547 HQCCIITMVSMWGLLETTRNISVWTQLWMQLFT*CLQTI*CTNSCQKQLLLLKMFQACRS 1368
H C IITMVS+ LE TRNISVW + MQLFT*C +TI*CTNSCQKQLLL KMFQAC+
Sbjct: 21 HPCYIITMVSICHSLEITRNISVWILM*MQLFT*CSRTI*CTNSCQKQLLLRKMFQACQC 200
Query: 1367 FAGQLMKVGLGLTIAWQWLSLIDGLTT*RIKMTLSGRWVK*RIL*LTGDILKNASHMLRA 1188
F GQLMKVG GLTIAW WL LIDGLTT*R KMTL+G+ V+* IL* TGDI K+A HMLRA
Sbjct: 201 FVGQLMKVG*GLTIAWLWLYLIDGLTT*RTKMTLNGQ*VE*HIL*PTGDIRKSALHMLRA 380
Query: 1187 MISLLLATKLLHFS*WTRKCTLACQTCSLLHLQL 1086
MISLLLAT+L HFS*WTRKC LACQTCSLLHLQL
Sbjct: 381 MISLLLATRLWHFS*WTRKCILACQTCSLLHLQL 482
Score = 260 bits (563), Expect = 2e-068
Identities = 113/154 (73%), Positives = 126/154 (81%)
Frame = -1 / +1
Query: 1546 INAVSSPWYQCGVYWKLPGIFQFGHSCGCSCLHDACKPFNAQTLARSNCCC*RCFRHAGP 1367
I+A+ SPWYQ + W+L GIF+FG+ C CSCLHDA +PFNAQTLARSN CC RCFRHA
Sbjct: 22 IHAI*SPWYQYVILWRLQGIFRFGY*CRCSCLHDAREPFNAQTLARSNYCCGRCFRHASA 201
Query: 1366 LPAS**RWGWV*LSPGNGYP**MD*LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRIC*EP 1187
L S**RWG V*LSPG GY **MD*L EE R* *+V+ NS YF+ QEIY K+H IC*EP
Sbjct: 202 LSVS**RWGRV*LSPGYGYT**MD*LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCIC*EP 381
Query: 1186 *SVYCWRQNYCISPDGQGNVHWHVRLAACFTYN* 1085
*SVYCWRQ+Y IS DGQGNV+WHVRLAACFTYN*
Sbjct: 382 *SVYCWRQDYGISLDGQGNVYWHVRLAACFTYN* 483
Score = 213 bits (460), Expect = 3e-054
Identities = 97/154 (62%), Positives = 101/154 (65%)
Frame = +3 / -3
Query: 1086 QL*VKQAASLTCQCTFPCPSGEMQ*FCRQQ*TDHGSQHMRCIFQYISC*SKYALFHPSTT 1265
QL*VKQAASLTCQ TFPCPS EM * CRQQ*TDHGSQHM+C F YISC KY LFH T
Sbjct: 482 QL*VKQAASLTCQYTFPCPSREMP*SCRQQ*TDHGSQHMQCTFPYISCWLKYVLFHSLTI 303
Query: 1266 QSHLXXXXXXXXXXXXPLPGDSQTQPHLHQLAGKGPACLKHXXXXXXXXARVCALNGLQA 1445
Q HL P PGDSQT PHLHQL K ACLKH ARVCALNG +A
Sbjct: 302 QGHLCSSSSQSIYQV*P*PGDSQTLPHLHQLTDKALACLKHLPQQ*LLLARVCALNGSRA 123
Query: 1446 SCKQLHPQLCPN*NIPGSFQ*TPH*YHGDDTALM 1547
SCKQLH PN NIP + Q +*YHGD A M
Sbjct: 122 SCKQLHLHQYPNRNIPCNLQRMTY*YHGDYIAWM 21
>gb|BU984253.1|BU984253 HF03G17r HF Hordeum vulgare subsp. vulgare cDNA clone HF03G17
5-PRIME, mRNA sequence
Length = 616
Score = 356 bits (772), Expect = 3e-097
Identities = 143/182 (78%), Positives = 154/182 (84%)
Frame = -2 / +1
Query: 993 HPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIV 814
H EWIDFPREGNNWSYDKCRRQWSLVD DHLRYKYMNAFDQAMNALD++FSFLSSSKQIV
Sbjct: 4 HEEWIDFPREGNNWSYDKCRRQWSLVDIDHLRYKYMNAFDQAMNALDDKFSFLSSSKQIV 183
Query: 813 SDMNDEEKVIVFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDALXXXXXXXXX 634
SDMN+E+KVIVFERGDLVFVFNFHP KTY+GYKVGCDLPGKY+VALDSDAL
Sbjct: 184 SDMNEEKKVIVFERGDLVFVFNFHPNKTYDGYKVGCDLPGKYKVALDSDALMFGGHGRVA 363
Query: 633 XXXXXFTSPEGVPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEAGAGRRLHAKAETGKT 454
FTSPEG+PGVPETNFNNRPNSFK+LSPPRTCVAYYRV+E + A GKT
Sbjct: 364 HDSDHFTSPEGIPGVPETNFNNRPNSFKILSPPRTCVAYYRVEEKAEKPKDGGAAFWGKT 543
Query: 453 SP 448
+P
Sbjct: 544 AP 549
Score = 313 bits (677), Expect = 4e-084
Identities = 134/154 (87%), Positives = 141/154 (91%)
Frame = +2 / -3
Query: 527 QVRGGERTLNEFGRLLKFVSGTPGTPSGDVK*STSWPTLPCPPKTRASESRATLYFPGKS 706
QVRGG++ LNE GRLLKFVSGTPG PSGDVK*S SW TLPCPP +ASESRATLYFPGKS
Sbjct: 470 QVRGGDKILNELGRLLKFVSGTPGIPSGDVK*SESWATLPCPPNIKASESRATLYFPGKS 291
Query: 707 HPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERKENLSSSAFIAWSNAF 886
HPTL*PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RKENLSSSAFIA SNAF
Sbjct: 290 HPTL*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRKENLSSSAFIA*SNAF 111
Query: 887 MYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHS 988
MYLYR+*S+STRLH RLHLS*LQL PSLGKSIHS
Sbjct: 110 MYLYRR*SMSTRLHWRLHLS*LQLLPSLGKSIHS 9
Score = 211 bits (455), Expect = 2e-053
Identities = 98/164 (59%), Positives = 114/164 (69%)
Frame = -1 / +3
Query: 985 MD*LSKRREQLEL**MQTTVEPCGH*SLAVQVHECV*PSDECAR*EIFLPFVVKADRQRH 806
MD LSKRR+QLEL**MQT VEP H*S +QVHE +* S+ECAR +IFLP ++KAD QRH
Sbjct: 12 MDRLSKRRQQLEL**MQTPVEPRRH*SPTIQVHERI*SSNECARRQIFLPIIIKADCQRH 191
Query: 805 ER*GKGYCL*TWRFSFCFQFPSQENLRGLQSGMRFAWEIQSSPGL*CSGLRWTWKSWPRR 626
E +GYC+*TWR F QFPSQ NL LQS M AWE+Q S GL C + WTWKS P
Sbjct: 192 E*GKEGYCI*TWRSGFRLQFPSQ*NL*WLQSRM*LAWEVQGSSGLRCFDVWWTWKSGP*L 371
Query: 625 GSLHVA*RGARGARNELQQPAELVQSPFSAPHLCGLLPCRRSRG 494
GSLH+ *R RN+LQQP L+Q+ S +LCGLL R G
Sbjct: 372 GSLHIT*RNTGSTRNKLQQPP*LIQNLVSTSYLCGLLSRRGKSG 503
Score = 199 bits (429), Expect = 7e-050
Identities = 90/164 (54%), Positives = 117/164 (71%)
Frame = +1 / -2
Query: 502 FVYTVISHTGAGRRKDFXXXXXXXXXXFGHPWHPFRRREVIHVVANSSMSTEDQSIRVQG 681
F+ ++SHTG R+DF FG+ + FR EVI V+ +SSMST+ QSI VQ
Sbjct: 495 FLDAIVSHTGTRWRQDFE*VRAVVEVCFGYSRYSFR*CEVIRVMGHSSMSTKHQSIGVQS 316
Query: 682 YSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFLIVHVADDLL*RRKEGKSLIER 861
Y V PRQ+ S FV ++ F+GMEIE++N ISTFK NNL ++HVAD+LL* EGK ++ER
Sbjct: 315 YLVLPRQVTSDFVTIIGFIGMEIEDENQISTFKYNNLLFLIHVADNLL****EGKFVVER 136
Query: 862 IHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKVNPFWV 993
IH L+K +HVLV VI+V +APL+SAFII P+V FSWKV+PF V
Sbjct: 135 IHCLIKCVHVLVS*VINVDEAPLASAFIITPIVAFSWKVDPFLV 4
Score = 181 bits (390), Expect = 2e-044
Identities = 84/151 (55%), Positives = 96/151 (63%)
Frame = +3 / -1
Query: 495 PLLRLHGNKPHRCGAEKGL*TSSAGC*SSFRAPLAPLQAT*SDPRRGQLFHVHRRPEHQS 674
PL +KPHR E * S GC*S FR LQ *SDP G LFHVH+ +H+S
Sbjct: 502 PLFPRRDSKPHRYEVETRF*MS*GGC*SLFRVLPVFLQVM*SDPSHGPLFHVHQTSKHRS 323
Query: 675 PGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGRKISH 854
P L C SQA+ I LC+ +F WDGN*++K +LHVQ Q*P SCR*+SAL GRKI
Sbjct: 322 PELPCTSQASHIRLCNHHRFYWDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGRKICR 143
Query: 855 RAHSSLGQTHSCTCTASDQCPQGSTVVCIYH 947
RAHS L Q SCTC DQC +GST VCIYH
Sbjct: 142 RAHSLLDQMRSCTCIVGDQCRRGSTGVCIYH 50
Score = 163 bits (351), Expect = 4e-039
Identities = 87/158 (55%), Positives = 95/158 (60%)
Frame = -3 / +2
Query: 992 TQNGLTFQEKGTTGAMINADDSGALWTLITCGTST*MRLTKR*MRSMRDFPSFRRQSRSS 813
T+NG TFQEK T G MINAD SGA TLIT TST* L K+*MRS +FPS+ QSR S
Sbjct: 5 TRNGSTFQEKATIGVMINADASGASSTLITYDTST*THLIKQ*MRSTTNFPSYHHQSRLS 184
Query: 812 AT*TMRKRLLSLNVEI*FLFSISIPRKLTRATKWDAICLGNTE*PWTLMLWSSVDMEELA 633
AT* ++RLL LNVEI F SISIP K TK D CLG+T * WT ML VDMEE
Sbjct: 185 AT*MRKRRLLYLNVEIWFSSSISIPIKPMMVTKSDVTCLGSTR*LWTPML*CLVDMEEWP 364
Query: 632 TTWITSRRLKGCQGCPXXXXXXXXXXXXSFLRPAPVWL 519
T ITS LK + P S L PVWL
Sbjct: 365 MTRITSHHLKEYREYPKQTSTTALTHSKSCLHLVPVWL 478
>gb|BG367041.1|BG367041 HVSMEi0009O06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0009O06f, mRNA sequence
Length = 764
Score = 329 bits (713), Expect(2) = 6e-093
Identities = 133/151 (88%), Positives = 142/151 (94%)
Frame = -2 / +1
Query: 1215 EKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMAL 1036
EKCIAYAESHDQSIVGDKT+AFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMAL
Sbjct: 49 EKCIAYAESHDQSIVGDKTMAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMAL 228
Query: 1035 GGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNAL 856
GGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVD DHLRYK MNAFDQ MNAL
Sbjct: 229 GGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDIDHLRYKCMNAFDQTMNAL 408
Query: 855 DERFSFLSSSKQIVSDMNDEEKVIVFERGDL 763
D +FSFLSS KQI +++N+E+KV+ ER +L
Sbjct: 409 DNKFSFLSS*KQIENNINEEKKVVG*ERENL 501
Score = 237 bits (511), Expect(2) = 1e-061
Identities = 103/147 (70%), Positives = 119/147 (80%)
Frame = -1 / +3
Query: 1213 KMHRIC*EP*SVYCWRQNYCISPDGQGNVHWHVRLAACFTYN*SRDCTPKDDSLHHNGPW 1034
K+H IC*EP*SVYCWRQ+Y IS DGQGNV+WHVRLAACFTYN*S CT KDDSLHH+G W
Sbjct: 51 KVHCIC*EP*SVYCWRQDYGISLDGQGNVYWHVRLAACFTYN*SWHCTSKDDSLHHHGSW 230
Query: 1033 R*WLLEFYGK*VWSPRMD*LSKRREQLEL**MQTTVEPCGH*SLAVQVHECV*PSDECAR 854
R*WLLEFYG *VW PRMD LSKRR+QLEL**MQT VEP H*S +QVHE +* ++ECAR
Sbjct: 231 R*WLLEFYG**VWPPRMDRLSKRRQQLEL**MQTPVEPRRH*SPTIQVHERI*SNNECAR 410
Query: 853 *EIFLPFVVKADRQRHER*GKGYCL*T 773
+I LP ++K + ++H+ KG L T
Sbjct: 411 QQI*LPIIMKTN*EQHK*GKKGSWLGT 491
Score = 230 bits (497), Expect(2) = 9e-063
Identities = 95/126 (75%), Positives = 110/126 (87%)
Frame = +1 / -3
Query: 838 EGKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKVNPFWVTKLISHKI 1017
E K ++ERIH L+K +H LV VI+V +APL+SAFII P+V FSWKV+PFWV KLI+HKI
Sbjct: 426 EAKFVVERIHCLIKCVHALVS*VINVDEAPLASAFIITPIVAFSWKVDPFWVAKLITHKI 247
Query: 1018 QVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALS 1197
QVAITSK H DEVNHLL+CN +INCR*SRLQV*HAS+HFLVHQEKC+S VANNRLIMALS
Sbjct: 246 QVAITSKSHGDEVNHLLKCNATINCR*SRLQV*HASIHFLVHQEKCHSLVANNRLIMALS 67
Query: 1198 ICDAFF 1215
IC+A F
Sbjct: 66 ICNALF 49
Score = 218 bits (470), Expect = 1e-055
Identities = 103/150 (68%), Positives = 112/150 (74%)
Frame = -3 / +2
Query: 1214 KNASHMLRAMISLLLATKLLHFS*WTRKCTLACQTCSLLHLQLIEGLHSKR*FTSSQWPL 1035
K+A HMLRAMISLLLAT+L HFS*WTRKC LACQTCSLLHLQLI LH KR*FTSS W L
Sbjct: 50 KSALHMLRAMISLLLATRLWHFS*WTRKCILACQTCSLLHLQLIVALHFKR*FTSSPWLL 229
Query: 1034 EVMAT*ILWEMSLVTQNGLTFQEKGTTGAMINADDSGALWTLITCGTST*MRLTKR*MRS 855
EVMAT*ILW MSL TQNG TFQEK T G MINAD SGA TLIT TS * L K+*MRS
Sbjct: 230 EVMAT*ILWVMSLATQNGSTFQEKATIGVMINADASGASSTLITYDTSA*THLIKQ*MRS 409
Query: 854 MRDFPSFRRQSRSSAT*TMRKRLLSLNVEI 765
+ S+ +++ T* +KR L NV I
Sbjct: 410 TTNLASYHHENKLRTT*MRKKR*LVRNVRI 499
Score = 192 bits (414), Expect = 8e-048
Identities = 90/148 (60%), Positives = 94/148 (63%)
Frame = +3 / -2
Query: 771 HVQRQ*PFPHRSCR*RSALTTKGRKISHRAHSSLGQTHSCTCTASDQCPQGSTVVCIYHX 950
HV Q PF C + G I RAHS Q SCTC DQC +GST VCIYH
Sbjct: 493 HVPNQLPFFPHLCCSQFVFMMIGS*ICCRAHSLFDQMRSCTCIVGDQCRRGSTGVCIYHN 314
Query: 951 XXXXXXXXXXXXXGDQTHFP*NSSSHHLQGPL**SESSFGVQSLDQL*VKQAASLTCQCT 1130
G QTH+P*NSSSHHLQ P **SESSF VQ DQL*VKQAASLTCQ T
Sbjct: 313 SNCCLLLESRSILGGQTHYP*NSSSHHLQEPW**SESSFEVQCHDQL*VKQAASLTCQYT 134
Query: 1131 FPCPSGEMQ*FCRQQ*TDHGSQHMRCIF 1214
FPCPS EM * CRQQ*TDHGSQHM+C F
Sbjct: 133 FPCPSREMP*SCRQQ*TDHGSQHMQCTF 50
Score = 127 bits (273), Expect(3) = 1e-061
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2 / -1
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
RA+VMK*IIF SA+PRSIVGEAGCKSDMPVYISLSI+RNAIVLSPTID*SWLSAYAMHFS
Sbjct: 227 RAMVMK*IIF*SAMPRSIVGEAGCKSDMPVYISLSIKRNAIVLSPTID*SWLSAYAMHFS 48
Score = 119 bits (255), Expect(3) = 1e-061
Identities = 55/73 (75%), Positives = 60/73 (82%)
Frame = +2 / -1
Query: 773 RSKTITFSSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*L 952
RS TF SSFM +ICF D+RK NL SSAFI SNAFM+LYR+*S+STRLH RLHLS*L
Sbjct: 491 RS*PTTFFSSFMLFSICFHDDRKLNLLSSAFIV*SNAFMHLYRR*SMSTRLHWRLHLS*L 312
Query: 953 QLFPSLGKSIHSG 991
QL PSLGKSIHSG
Sbjct: 311 QLLPSLGKSIHSG 273
Score = 34.1 bits (68), Expect(2) = 6e-093
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 1260 SMGEIAHTLTNRRYTEK 1210
SM IAHTLTNRRYT K
Sbjct: 3 SMSGIAHTLTNRRYTGK 53
Score = 32.2 bits (64), Expect(2) = 9e-063
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 1211 FSVYLLLVKVCAISPID 1261
F VYLLLVKVCAI ID
Sbjct: 52 FPVYLLLVKVCAIPLID 2
Score = 29.9 bits (59), Expect(3) = 1e-061
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 1209 IFQYISC*SKYALFHPST 1262
+F+YISC KY LFH T
Sbjct: 54 LFRYISCWLKYVLFHSLT 1
Score = 22.1 bits (42), Expect(2) = 1e-061
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 1249 NSAYFD*QEIY*K 1211
NS YF+ QEIY K
Sbjct: 14 NSTYFNQQEIYRK 52
>gb|BE195628.2|BE195628 HVSMEh0089P20f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089P20f, mRNA sequence
Length = 801
Score = 196 bits (422), Expect(4) = 5e-089
Identities = 75/107 (70%), Positives = 88/107 (82%)
Frame = -2 / +2
Query: 1287 LKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDL 1108
L + D W MG+I HTLTNRR+ EKC+ YAESHDQ++VGDKTIAF LMDK+MY M+
Sbjct: 140 LLKQSDESWKMGDIVHTLTNRRWLEKCVTYAESHDQALVGDKTIAFWLMDKDMYDFMALD 319
Query: 1107 QPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
+P++P IDRGIAL KMI +TM LGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 320 RPSTPRIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPR 460
Score = 86.8 bits (183), Expect(4) = 5e-089
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = -2 / +2
Query: 1428 MHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDS 1267
+H L P+A + EDVSGMP C PV +GGVGFDYRL MA+ D+WI+ LK D+S
Sbjct: 2 IHGLYPDAVSIGEDVSGMPTFCIPVPDGGVGFDYRLHMAVADKWIELLKQSDES 163
Score = 80.3 bits (169), Expect(2) = 3e-028
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +2 / -1
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
+ +V II +A+PRS+ G G M YISLSI +NAIVLSPT *S LSA HFS
Sbjct: 390 KPMVTSLIILCNAMPRSMRGVEGLSRAMKSYISLSINQNAIVLSPTSA*S*LSA*VTHFS 211
Query: 1217 VYLLLVKVCAISPIDHSES 1273
+LL V+VC ISPI S
Sbjct: 210 SHLLFVRVCTISPIFQDSS 154
Score = 79.9 bits (168), Expect(2) = 3e-021
Identities = 36/98 (36%), Positives = 51/98 (52%)
Frame = +1 / -3
Query: 970 WKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQE 1149
WK+ PF + KLISH+I++A + H D+ +H + C +IN R R H +H L+HQ
Sbjct: 457 WKIYPFRMPKLISHEIKIAFAT*THGDKPDHFM*CYATINARG*RSIQSHEIIHILIHQP 278
Query: 1150 KCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRP 1263
+CNS V N LIM I D + + H P
Sbjct: 277 ECNSLVTN*CLIMTFCISDTLLKPPSIC*GVHNIAHFP 164
Score = 75.3 bits (158), Expect(4) = 5e-089
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = -2 / +2
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+ + F++S Q VS +E+KV
Sbjct: 497 GNNNSYDKCRRKFDLGDADFLRYRGMQEFDQAMPHLEGKIGFMTSEHQYVSRKLEEDKVN 676
Query: 783 VF 778
+F
Sbjct: 677 IF 682
Score = 66.6 bits (139), Expect(2) = 3e-028
Identities = 31/49 (63%), Positives = 33/49 (67%)
Frame = +2 / -1
Query: 1268 ESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASG 1414
+SSL R SIHLS AI RR*S PTPPS TG Q G+P TSS ASG
Sbjct: 162 DSSLCLRSSIHLSATAICRR*SKPTPPSGTGMQNVGIPLTSSPMDTASG 16
Score = 43.7 bits (89), Expect(2) = 3e-021
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1 / -3
Query: 1267 RVIFILQVVNPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSN 1398
R + +L+ NP I SH QAIVK N T + AK RH+ +IF+N
Sbjct: 163 RFVTLLEEFNPFICYSHMQAIVKTNTTIWDRDAKCRHSADIFTN 32
Score = 29.9 bits (59), Expect(4) = 5e-089
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -2 / +3
Query: 780 FERGDLVFVFNF 745
FERG+LVFVFNF
Sbjct: 681 FERGNLVFVFNF 716
>gb|CA022075.1|CA022075 HZ42B15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42B15
5-PRIME, mRNA sequence
Length = 672
Score = 196 bits (422), Expect(3) = 6e-089
Identities = 75/107 (70%), Positives = 88/107 (82%)
Frame = -2 / +1
Query: 1287 LKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDL 1108
L + D W MG+I HTLTNRR+ EKC+ YAESHDQ++VGDKTIAF LMDK+MY M+
Sbjct: 181 LLKQSDESWKMGDIVHTLTNRRWLEKCVTYAESHDQALVGDKTIAFWLMDKDMYDFMALD 360
Query: 1107 QPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
+P++P IDRGIAL KMI +TM LGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 361 RPSTPRIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPR 501
Score = 105 bits (224), Expect(3) = 6e-089
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = -2 / +1
Query: 1464 DAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYL 1285
+AVVY+ML N L+H L P+A + EDVSGMP C PV +GGVGFDYRL MA+ D+WI+ L
Sbjct: 7 EAVVYLMLVNDLIHGLYPDAVSIGEDVSGMPTFCIPVPDGGVGFDYRLHMAVADKWIELL 186
Query: 1284 KNKDDS 1267
K D+S
Sbjct: 187 KQSDES 204
Score = 81.7 bits (172), Expect(3) = 4e-036
Identities = 37/99 (37%), Positives = 52/99 (52%)
Frame = +1 / -1
Query: 967 SWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQ 1146
SWK+ PF + KLISH+I++A + H D+ +H + C +IN R R H +H L+HQ
Sbjct: 501 SWKIYPFRMPKLISHEIKIAFAT*THGDKPDHFM*CYATINARG*RSIQSHEIIHILIHQ 322
Query: 1147 EKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRP 1263
+CNS V N LIM I D + + H P
Sbjct: 321 PECNSLVTN*CLIMTFCISDTLLKPPSIC*GVHNIAHFP 205
Score = 80.3 bits (169), Expect(2) = 7e-023
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +2 / -2
Query: 1037 RAIVMK*IIFWSAIPRSIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFS 1216
+ +V II +A+PRS+ G G M YISLSI +NAIVLSPT *S LSA HFS
Sbjct: 431 KPMVTSLIILCNAMPRSMRGVEGLSRAMKSYISLSINQNAIVLSPTSA*S*LSA*VTHFS 252
Query: 1217 VYLLLVKVCAISPIDHSES 1273
+LL V+VC ISPI S
Sbjct: 251 SHLLFVRVCTISPIFQDSS 195
Score = 76.7 bits (161), Expect(3) = 4e-036
Identities = 40/66 (60%), Positives = 43/66 (65%)
Frame = +2 / -2
Query: 1268 ESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASI 1447
+SSL R SIHLS AI RR*S PTPPS TG Q G+P TSS ASG S I+ SI
Sbjct: 203 DSSLCLRSSIHLSATAICRR*SKPTPPSGTGMQNVGIPLTSSPMDTASG*SP*IRSLTSI 24
Query: 1448 M*TTAS 1465
*TTAS
Sbjct: 23 K*TTAS 6
Score = 67.5 bits (141), Expect(3) = 6e-089
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSS 829
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S
Sbjct: 538 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTS 672
Score = 48.7 bits (100), Expect(2) = 7e-023
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +1 / -1
Query: 1267 RVIFILQVVNPSIRDSHCQAIVKPNPTFINWPAKDRHA*NIFSNNSCFWQEFVH*MVCKH 1446
R + +L+ NP I SH QAIVK N T + AK RH+ +IF+N + ++*+V +H
Sbjct: 204 RFVTLLEEFNPFICYSHMQAIVKTNTTIWDRDAKCRHSADIFTNGYSIRIKSMN*IVDQH 25
Query: 1447 HVNN 1458
VN+
Sbjct: 24 *VNH 13
Score = 33.1 bits (66), Expect(3) = 4e-036
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2 / -2
Query: 851 SSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SS IA SN+ + Y + S S R + R HLS*L LFP
Sbjct: 650 SSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLFP 537
>gb|BU966674.1|BU966674 HB02A08r BC Hordeum vulgare subsp. vulgare cDNA clone HB02A08
5-PRIME, mRNA sequence
Length = 407
Score = 297 bits (644), Expect = 1e-079
Identities = 119/132 (90%), Positives = 125/132 (94%)
Frame = -2 / +3
Query: 2100 PASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRANNYNTVQLM 1921
P SERY FKHPRP KP APRIYEAHVGMSGEKP VSTYREFADNVLPR++ANNYNTVQLM
Sbjct: 12 PTSERYVFKHPRPQKPDAPRIYEAHVGMSGEKPEVSTYREFADNVLPRVKANNYNTVQLM 191
Query: 1920 AVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTD 1741
A+ EHSYYASFGYHVTNFFA SSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHAS+N+TD
Sbjct: 192 AIKEHSYYASFGYHVTNFFAASSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASSNMTD 371
Query: 1740 GLNGYDVGQSTQ 1705
GLNGYDVGQ+TQ
Sbjct: 372 GLNGYDVGQNTQ 407
Score = 263 bits (568), Expect = 4e-069
Identities = 114/131 (87%), Positives = 118/131 (90%)
Frame = +2 / -2
Query: 1709 VLCPTS*PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRSSGVPDLLLTAKKFVTWYP 1888
V CPTS*PF+PSV LLLAWLWTTSIRTR PKLCALSTRYLRSSGVPDLLL AKKFVTWYP
Sbjct: 403 VFCPTS*PFRPSVILLLAWLWTTSIRTRSPKLCALSTRYLRSSGVPDLLLAAKKFVTWYP 224
Query: 1889 KEA*YECSITAIN*TVL*LFARMRGNTLSANSLYVLTAGFSPLIPTWAS*IRGAAGFEGR 2068
KEA*YECS+ AIN*TVL*LFA RGNTLSANSLYVLT+GFSPLIPT AS IRGA+GF GR
Sbjct: 223 KEA*YECSLIAIN*TVL*LFAFTRGNTLSANSLYVLTSGFSPLIPT*ASYIRGASGF*GR 44
Query: 2069 GCLNVYLSEAG 2101
GCLN YLS G
Sbjct: 43 GCLNTYLSLVG 11
Score = 209 bits (451), Expect = 6e-053
Identities = 91/128 (71%), Positives = 99/128 (77%)
Frame = -1 / +2
Query: 2092 *KVHI*ASSAFKACCSTYL*SPCRYEW*KASSKHI*GICRQCVATHTSK*LQHSSVDGSY 1913
*KV +*ASSA +A C TY+* CR EW*+A SKHI ICRQCVAT K*LQHSSVDG+
Sbjct: 20 *KVCV*ASSASEARCPTYI*GSCRDEW*EA*SKHIQRICRQCVATRKGK*LQHSSVDGNQ 199
Query: 1912 GAFVLCFFRVPCDKFLCG*QQIRHTRGPQISC**GTQFGFASSDGCCP*PCK**CHRWFK 1733
G F+LCFF VPCD+FL G*QQIRH RG QISC* GT F A SDGCCP*PC+ * RW K
Sbjct: 200 GTFILCFFWVPCDEFLRG*QQIRHARGSQISC*QGT*FRAACSDGCCP*PCEQ*YDRWSK 379
Query: 1732 WL*CWTKH 1709
WL*CW KH
Sbjct: 380 WL*CWAKH 403
Score = 183 bits (395), Expect = 3e-045
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = +1 / -1
Query: 1771 DNIHQNSQTQTVCLINKIFEVLWCA*SAANRKEICHMVPERSIVRMLHNCHQLNCVVVIC 1950
DNIHQN+Q T+CL+NKIFE+LW A*SAA+R+EI HMVP+RSI+ M +CHQLNCVVVIC
Sbjct: 341 DNIHQNTQP*TMCLVNKIFEILWRA*SAASREEIRHMVPKRSII*MFLDCHQLNCVVVIC 162
Query: 1951 SYAWQHIVCKFPICAYCWLFTTHTYMGFIDTWSSRL*RPRMLKCVPFRS 2097
YAWQHIVCKF +CAY L TTH M I TW L RPRMLK +PF S
Sbjct: 161 LYAWQHIVCKFSVCAYFRLLTTHPDMSLIYTWGIWLLRPRMLKHIPFTS 15
Score = 160 bits (343), Expect = 5e-038
Identities = 72/104 (69%), Positives = 77/104 (74%)
Frame = +3 / -3
Query: 1779 PSELANPNCVPYQQDI*GPLVCLICC*PQRNLSHGTRKKHSTNAP*LPSTELCCSYLLVC 1958
PSE A N VP QQDI* PL CLICC*P+RN SHGT+KKH+ N P*LPSTELCCSYL +
Sbjct: 333 PSEHAALNYVPCQQDI*DPLACLICC*PRRNSSHGTQKKHNMNVP*LPSTELCCSYLPLR 154
Query: 1959 VATHCLQIPYMCLLLAFHHSYLHGLHRYVEQQALKAEDA*MCTF 2090
VATHCLQI MCLL A HHS H H YV A +AEDA* TF
Sbjct: 153 VATHCLQILCMCLLQASHHSSRHEPHIYVGHLASEAEDA*THTF 22
Score = 147 bits (316), Expect = 3e-034
Identities = 70/95 (73%), Positives = 75/95 (78%)
Frame = -3 / +1
Query: 1997 *AHIGNLQTMCCHAYEQITTTQFS*WQLWSIRTMLLSGTM*QISLRLAADQAHQRTSNIL 1818
*AH NLQTMCCHA QITTTQFS*WQ +I MLL GTM*+IS RLAADQA QR SNIL
Sbjct: 115 *AHTENLQTMCCHA*RQITTTQFS*WQSRNIHIMLLLGTM*RISSRLAADQARQRISNIL 294
Query: 1817 LIRHTVWVCEF*WMLSIAMQVIMSQMV*MAMMLDK 1713
L RH V C F*WMLSIAM+ ++ QMV*MAMML K
Sbjct: 295 LTRHIV*GCVF*WMLSIAMRAVI*QMV*MAMMLGK 399
>gb|BU975349.1|BU975349 HB30O07r BC Hordeum vulgare subsp. vulgare cDNA clone HB30O07
5-PRIME, mRNA sequence
Length = 471
Score = 215 bits (463), Expect(2) = 2e-078
Identities = 82/113 (72%), Positives = 94/113 (83%)
Frame = -2 / +2
Query: 2535 DPKLEIFKDHFRYRMKRFLEQKGSIEENEGSLESFSKGYLKFGINTNEDGTVYREWAPAA 2356
DPK FKDHF YRMK++ +QK I+E+EG LE FSKGYLKFGINT D TVYREWAPAA
Sbjct: 2 DPKFAGFKDHFSYRMKKYRDQKHLIDEHEGGLEEFSKGYLKFGINTENDATVYREWAPAA 181
Query: 2355 QEAELIGDFNDWNGANHKMEKDKFGVWSIKIDHVKGKPAIPHNSKVKFRFLHG 2197
+EA++IGDFN+WNG+ H+M KD FGVWSI+I HV GKPAIPHNSKVKFRF G
Sbjct: 182 KEAQVIGDFNNWNGSGHRMTKDNFGVWSIRISHVNGKPAIPHNSKVKFRFHRG 340
Score = 156 bits (336), Expect(2) = 2e-056
Identities = 78/109 (71%), Positives = 81/109 (74%)
Frame = +2 / -1
Query: 2210 RNLTLEL*GMAGFPLTWSILIDQTPNLSFSILWFAPFQSLKSPISSASCAAGAHSRYTVP 2389
RNLTLEL GMAGFPLTW ILIDQTP LSF IL PFQ LKSPI+ AS AAGAHS YTV
Sbjct: 327 RNLTLELWGMAGFPLTWEILIDQTPKLSFVILCPEPFQLLKSPITCASFAAGAHSLYTVA 148
Query: 2390 SSFVLIPNFK*PLEKDSRLPSFSSIDPFCSRNLFIRYLKWSLNISSLGS 2536
S VLIPNFK*PLE SR PS SSI F SR FI LK SL ++LGS
Sbjct: 147 SFSVLIPNFK*PLENSSRPPSCSSIRCFWSRYFFIL*LK*SLKPANLGS 1
Score = 139 bits (299), Expect(2) = 6e-036
Identities = 61/113 (53%), Positives = 73/113 (64%)
Frame = -1 / +1
Query: 2536 GPQAGDIQGPFQVPDEKIPRAERIN*RK*GKS*IFF*RLFEIWD*YK*GWNCIS*MGTCC 2357
G Q +QG Q+ DEK+P E +*R G+ * *RLFE+WD ++ NC+ MG C
Sbjct: 1 GSQVRRLQGSLQLQDEKVP*PETSD*RTRGRP*RVL*RLFEVWDQHRK*CNCVQGMGPCS 180
Query: 2356 AGGRAYW*LQ*LEWCKP*DGEG*IWCLVDQN*PCQRETCHPSQFQG*ISLSTW 2198
G YW*LQ LEW D EG* WCLV+Q+ PCQRETCHP FQG*IS+S W
Sbjct: 181 KGSTGYW*LQQLEWLWAQDDEG*FWCLVNQDFPCQRETCHPP*FQG*ISISPW 339
Score = 129 bits (277), Expect(2) = 6e-043
Identities = 56/110 (50%), Positives = 70/110 (63%)
Frame = +1 / -3
Query: 2206 KAKFNLGIVRDGRFPFDMVNFDRPNTKFILLHLMVCTIPVIEVTNKLCLLRSRCPFTIYS 2385
K+KFNLGI+ DGRFP DM N D PNTK IL H + IPV+EVTN LC L R PF ++S
Sbjct: 331 KSKFNLGIMGDGRFPVDMGNPD*PNTKIILRHPVPRAIPVVEVTNNLCFLCCRGPFPVHS 152
Query: 2386 SILICINPKFQIAFRKRFKTXXXXXXXXXXXXXXXHPVPEMVLEYLQLGV 2535
I+ C++PK QIAFR+ FK HPV E++LE +LG+
Sbjct: 151 CIIFCVDPKLQIAFRELFKASLVFVNQMFLVTVLFHPVTEVILEAGELGI 2
Score = 101 bits (215), Expect(2) = 1e-023
Identities = 58/109 (53%), Positives = 65/109 (59%)
Frame = -3 / +3
Query: 2531 PSWRYSRTISGTG*KDS*SRKDQLKKMREVLNLFLKAI*NLGLIQMRMELYIVNGHLLRR 2352
PS SR S TG*K + +R L RE L LKAI*+LG Q M+L NG L +R
Sbjct: 6 PSSPASRITSVTG*KSTVTRNI*LTNTREALKSSLKAI*SLGSTQKMMQLCTGNGPLQQR 185
Query: 2351 RQSLLVTSMTGMVQTIRWRRINLVFGRSKLTMSKGNLPSLTIPRLNFAF 2205
+ LLVTS TGM RRI LVFG+S MS GNLPS IPRLNF F
Sbjct: 186 KHRLLVTSTTGMALGTG*RRIILVFGQSGFPMSTGNLPSPIIPRLNFDF 332
Score = 100 bits (212), Expect(2) = 2e-078
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -2 / +2
Query: 2196 GVWVDRIPALIRYATVDASKFGAPYDGVHWDPPASERYTFKH 2071
GVWVDRIPA IRYA DASKFGAPYDGVHWDPP SERY FKH
Sbjct: 344 GVWVDRIPAWIRYAIADASKFGAPYDGVHWDPPTSERYVFKH 469
Score = 97.3 bits (206), Expect(2) = 6e-033
Identities = 54/111 (48%), Positives = 60/111 (54%)
Frame = +3 / -2
Query: 2199 HVESEI*PWNCEGWQVSL*HGQF*STKHQIYPSPSYGLXXXXXXXXQ*ALPPAQQVPIHD 2378
H E EI*PWN GWQVS *HG+ * TKHQ YPS S Q* + P Q PI
Sbjct: 338 HGEIEI*PWNYGGWQVSR*HGKS*LTKHQNYPSSSCAQSHSSC*SHQ*PVLPLLQGPIPC 159
Query: 2379 IQFHPHLY*SQISNSL*KKIQDFPHFLQLILSALGIFSSGT*NGP*ISPAW 2531
Q H L *SQ SNSL*+ +Q P Q +S G FSS *+ P* W
Sbjct: 158 TQLHHFLC*SQTSNSL*RTLQGLPRVRQSDVSGHGTFSSCN*SDP*SRRTW 6
Score = 84.5 bits (178), Expect(2) = 2e-056
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +2 / -1
Query: 2069 GCLNVYLSEAGGSQ*TPS*GAPNLEASTVA*RINAGIRSTHTPPCR 2206
GCLN YLS GGSQ*TPS GAPNLEAS +A*RI+AGIRSTHTP R
Sbjct: 471 GCLNTYLSLVGGSQ*TPSYGAPNLEASAIA*RIHAGIRSTHTPSPR 334
Score = 66.6 bits (139), Expect(2) = 6e-043
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = +3 / -2
Query: 2070 DA*MCTFQKQEDPNEHHHRELQI*RHQQSHNESMLEYDQPILH 2198
DA* TF DP+EH ELQI*RHQQ HNESM E DQPILH
Sbjct: 470 DA*THTFH*LVDPSEHRRMELQI*RHQQLHNESMQESDQPILH 342
Score = 65.7 bits (137), Expect(2) = 6e-033
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +1 / -3
Query: 2071 MLKCVPFRSRRIPMNTIIGSSKFRGINSRITNQCWNTINPYS 2196
MLK +PF S IP+NT++ SSKFRGI++ ITN C N INPYS
Sbjct: 469 MLKHIPFTSWWIPVNTVVWSSKFRGISNCITNPCRNPINPYS 344
Score = 33.1 bits (66), Expect(2) = 6e-036
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / +1
Query: 2197 WSMG*SYSSIDSLCDC* 2147
WSMG*S S +DSLC+C*
Sbjct: 343 WSMG*SDSCMDSLCNC* 393
Score = 29.9 bits (59), Expect(2) = 1e-023
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3 / +3
Query: 2198 VEYGLIVFQH*FVXXXXXXXXXXXXXMVFIGILLLLKG 2085
+EYGLI F H FV VF GI L+KG
Sbjct: 342 MEYGLIGFLHGFVMQLLMPLNLELHTTVFTGIHQLVKG 455
>gb|BG415291.2|BG415291 HVSMEk0005O03f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005O03f, mRNA sequence
Length = 993
Score = 286 bits (619), Expect = 4e-076
Identities = 122/169 (72%), Positives = 134/169 (79%)
Frame = -2 / +1
Query: 1380 GMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDSEWSMGEIAHTLTNRRYTEKCIA 1201
GMPVLCR VDEGGVGFDYRLAMAIPDRWIDYLKNKDD EWSM IAHTLTNRRYTEKCIA
Sbjct: 1 GMPVLCRSVDEGGVGFDYRLAMAIPDRWIDYLKNKDDLEWSMSGIAHTLTNRRYTEKCIA 180
Query: 1200 YAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGY 1021
YAE+HDQSIVGDKT+AFLLMDKEMYTGMS+LQPA P + + +K I F L
Sbjct: 181 YAENHDQSIVGDKTMAFLLMDKEMYTGMSNLQPA*PKLIVALHFKK*ITFSPWLLKVMAT 360
Query: 1020 LNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFD 874
LN GNEFG P+ I+FP++GNN SYDKC+ +LV D L KYMNAFD
Sbjct: 361 LNLWGNEFGPPKRINFPKKGNN*SYDKCQPHGTLVTIDPLPSKYMNAFD 507
Score = 193 bits (415), Expect(4) = 6e-061
Identities = 85/96 (88%), Positives = 88/96 (91%)
Frame = +2 / -2
Query: 1091 VGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAISPIDHSE 1270
+G AGCK DMPVYISLSI+RNAIVLSPTID*SW SAYAMHFSVYLLLVKVCAI IDHS
Sbjct: 290 LG*AGCKFDMPVYISLSIKRNAIVLSPTID*SWFSAYAMHFSVYLLLVKVCAIPLIDHSR 111
Query: 1271 SSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGM 1378
SSLFF+*SIHLSGIAIARR*SNPTPPSST RQ TGM
Sbjct: 110 SSLFFK*SIHLSGIAIARR*SNPTPPSSTDRQSTGM 3
Score = 170 bits (365), Expect(3) = 5e-062
Identities = 76/96 (79%), Positives = 82/96 (85%)
Frame = -3 / +2
Query: 1379 ACRSFAGQLMKVGLGLTIAWQWLSLIDGLTT*RIKMTLSGRWVK*RIL*LTGDILKNASH 1200
AC+ F GQLMKVG GLTIAW WL LIDGLTT*R KMTL+G+ V+* IL* TGDI K+A H
Sbjct: 2 ACQCFVGQLMKVG*GLTIAWLWLYLIDGLTT*RTKMTLNGQ*VE*HIL*PTGDIRKSALH 181
Query: 1199 MLRAMISLLLATKLLHFS*WTRKCTLACQTCSLLHL 1092
MLR MISLLLATKL HFS*WTRKC LACQTCSLL+L
Sbjct: 182 MLRTMISLLLATKLWHFS*WTRKCILACQTCSLLNL 289
Score = 167 bits (360), Expect(3) = 5e-048
Identities = 74/96 (77%), Positives = 79/96 (82%)
Frame = +1 / -1
Query: 1093 R*SRLQV*HASVHFLVHQEKCNSFVANNRLIMALSICDAFFSISPVSQSMRYFTHRPLRV 1272
R SRLQV*HAS+HFLVHQEKC+SFVANNRLIM LSIC+A F ISPV SM Y TH P +V
Sbjct: 288 RLSRLQV*HASIHFLVHQEKCHSFVANNRLIMVLSICNALFRISPVG*SMCYSTH*PFKV 109
Query: 1273 IFILQVVNPSIRDSHCQAIVKPNPTFINWPAKDRHA 1380
IF+LQVVNPSIR SH QAIVKP PTFIN P K HA
Sbjct: 108 IFVLQVVNPSIRYSHSQAIVKPYPTFIN*PTKHWHA 1
Score = 152 bits (327), Expect(2) = 1e-041
Identities = 65/97 (67%), Positives = 67/97 (69%)
Frame = +3 / -3
Query: 1089 L*VKQAASLTCQCTFPCPSGEMQ*FCRQQ*TDHGSQHMRCIFQYISC*SKYALFHPSTTQ 1268
+*VKQAASLTCQ TFPCPS EM *FCRQQ*TDHGSQHM+C F YISC KY LFH T Q
Sbjct: 292 I*VKQAASLTCQYTFPCPSREMP*FCRQQ*TDHGSQHMQCTFPYISCWLKYVLFHSLTIQ 113
Query: 1269 SHLXXXXXXXXXXXXPLPGDSQTQPHLHQLAGKGPAC 1379
HL P PGDSQT PHLHQL K AC
Sbjct: 112 GHLCSSSSQSIYQV*P*PGDSQTLPHLHQLTDKALAC 2
Score = 149 bits (321), Expect(3) = 2e-043
Identities = 70/95 (73%), Positives = 76/95 (80%)
Frame = -1 / +3
Query: 1378 HAGPLPAS**RWGWV*LSPGNGYP**MD*LPEE*R*L*VVDG*NSAYFD*QEIY*KMHRI 1199
HA L S**RWG V*LSPG GY **MD*L EE R* *+V+ NS YF+ QEIY K+H I
Sbjct: 3 HASALSVS**RWGRV*LSPGYGYT**MD*LLEEQR*P*MVNEWNSTYFNQQEIYGKVHCI 182
Query: 1198 C*EP*SVYCWRQNYCISPDGQGNVHWHVRLAACFT 1094
C*EP*SVYCWRQNY IS DGQGNV+WHV+LAAC T
Sbjct: 183 C*EP*SVYCWRQNYGISLDGQGNVYWHVKLAACLT 287
Score = 55.6 bits (115), Expect(3) = 5e-062
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2 / +3
Query: 1089 IDRGIALQKMIHFITMALGGDGYLNFMG 1006
IDRG ALQK+ HF+TMAL GDGYL FMG
Sbjct: 291 IDRGFALQKINHFLTMALEGDGYLKFMG 374
Score = 53.3 bits (110), Expect(3) = 5e-062
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -1 / +3
Query: 1021 LEFYGK*VWSPRMD*LSKRREQLEL**MQTTVEPCGH*SLAVQVHE 884
L+F G *+W P+ D LSK+R+QL+L**M T +P +*S +QVHE
Sbjct: 360 LKFMG**IWPPQKDQLSKKRQQLKL**MPTPWDPRHN*SPTIQVHE 497
Score = 43.2 bits (88), Expect(4) = 6e-061
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1 / -1
Query: 874 VKRIHVLVPQVISVHKAPLSSAFIIAPVVPFSWKVNPFWVTKLIS 1008
+K +HVL I+ + P+ AFII +V F WKV+PF K I+
Sbjct: 507 IKGVHVLGW*GINCDEGPMGLAFIITSIVAFFWKVDPFGGAKFIT 373
Score = 39.6 bits (80), Expect(2) = 1e-041
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2 / -2
Query: 875 SNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHSG 991
S AFMYL + S+ TR+ HLS*LQL P GK I G
Sbjct: 506 SKAFMYLDGRGSIVTRVPWGWHLS*LQLLPFFGKLILLG 390
Score = 36.3 bits (73), Expect(3) = 5e-048
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1 / -2
Query: 955 VVPFSWKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSIN 1089
++PF K+ + HK +VAIT K H ++V + L+C +IN
Sbjct: 425 LLPFFGKLILLGGPNSLPHKFKVAITFKSHGEKVIYFLKCKATIN 291
Score = 33.1 bits (66), Expect(3) = 2e-043
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3 / +2
Query: 1004 MSLVTQNGLTFQEKGTTGAMINADDSGALWTLITCGTST*MRL 876
M+L G TFQ+K T MINA+ G LI ST* L
Sbjct: 377 MNLAPPKGSTFQKKATIEVMINANPMGPSSQLIPYHPST*TPL 505
Score = 33.1 bits (66), Expect(3) = 2e-043
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / +2
Query: 1090 N*SRDCTPKDDSLHHNGPWR*WLLEFYG 1007
N*S CT K+ SL H+G R*WL YG
Sbjct: 290 N*SWLCTSKNKSLSHHGS*R*WLP*IYG 373
Score = 29.0 bits (57), Expect(4) = 6e-061
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 1008 P*NSSSHHLQGPL**SESSFGVQSLDQ 1088
P* SHHLQ P * S+ F VQS DQ
Sbjct: 372 P*I*GSHHLQEPW*ESDLFFEVQSHDQ 292
Score = 28.1 bits (55), Expect(4) = 6e-061
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2 / -1
Query: 818 ICFDDERKENLSSSAFIAW 874
+CFDD RK AF+AW
Sbjct: 564 LCFDDYRKVYCFLGAFLAW 508
Score = 27.6 bits (54), Expect(3) = 5e-048
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3 / -3
Query: 870 LGQTHSCTCTASDQCPQGSTVVCIYH 947
L Q SCT DQ +GS V IYH
Sbjct: 511 LDQRRSCTWMVGDQL*RGSHGVGIYH 434
>gb|BG368110.1|BG368110 HVSMEi0015L13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0015L13f, mRNA sequence
Length = 879
Score = 274 bits (593), Expect = 2e-072
Identities = 122/153 (79%), Positives = 129/153 (84%)
Frame = +2 / -3
Query: 527 QVRGGERTLNEFGRLLKFVSGTPGTPSGDVK*STSWPTLPCPPKTRASESRATLYFPGKS 706
QV G ++ GRL KFV GTPG G V *S SW TLPCPP +ASESRATLYFPGKS
Sbjct: 460 QVPGPPTIPHQSGRLFKFVLGTPGILLGHV**SESWATLPCPPNIKASESRATLYFPGKS 281
Query: 707 HPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERKENLSSSAFIAWSNAF 886
HPTL*PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RKENLSSSAFIA SNAF
Sbjct: 280 HPTL*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRKENLSSSAFIA*SNAF 101
Query: 887 MYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIH 985
MYLYR+*S+STRLH RLHLS*LQL PSLGKSIH
Sbjct: 100 MYLYRR*SMSTRLHWRLHLS*LQLLPSLGKSIH 2
Score = 258 bits (558), Expect(2) = 6e-073
Identities = 100/108 (92%), Positives = 106/108 (98%)
Frame = -2 / +3
Query: 984 WIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDM 805
WIDFPREGNNWSYDKCRRQWSLVD DHLRYKYMNAFDQAMNALD++FSFLSSSKQIVSDM
Sbjct: 3 WIDFPREGNNWSYDKCRRQWSLVDIDHLRYKYMNAFDQAMNALDDKFSFLSSSKQIVSDM 182
Query: 804 NDEEKVIVFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDAL 661
N+E+KVIVFERGDLVFVFNFHP KTY+GYKVGCDLPGKY+VALDSDAL
Sbjct: 183 NEEKKVIVFERGDLVFVFNFHPNKTYDGYKVGCDLPGKYKVALDSDAL 326
Score = 188 bits (406), Expect = 1e-046
Identities = 88/144 (61%), Positives = 104/144 (72%)
Frame = -1 / +2
Query: 985 MD*LSKRREQLEL**MQTTVEPCGH*SLAVQVHECV*PSDECAR*EIFLPFVVKADRQRH 806
MD LSKRR+QLEL**MQT VEP H*S +QVHE +* S+ECAR +IFLP ++KAD QRH
Sbjct: 2 MDRLSKRRQQLEL**MQTPVEPRRH*SPTIQVHERI*SSNECARRQIFLPIIIKADCQRH 181
Query: 805 ER*GKGYCL*TWRFSFCFQFPSQENLRGLQSGMRFAWEIQSSPGL*CSGLRWTWKSWPRR 626
E +GYC+*TWR F QFPSQ NL LQS M AWE+Q S GL C + WTWKS P
Sbjct: 182 E*GKEGYCI*TWRSGFRLQFPSQ*NL*WLQSRM*LAWEVQGSSGLRCFDVWWTWKSGP*L 361
Query: 625 GSLHVA*RGARGARNELQQPAELV 554
GSL V *+ A+N+L+QPA L+
Sbjct: 362 GSLDVT*KNTGSAQNKLEQPA*LM 433
Score = 181 bits (389), Expect = 2e-044
Identities = 80/134 (59%), Positives = 102/134 (76%)
Frame = +1 / -2
Query: 583 FGHPWHPFRRREVIHVVANSSMSTEDQSIRVQGYSVFPRQIASHFVALVSFLGMEIENKN 762
FGH + R R VI V+ +SSMST+ QSI VQ Y V PRQ+ S FV ++ F+GMEIE++N
Sbjct: 404 FGHSRYSSRSRLVIRVMGHSSMSTKHQSIGVQSYLVLPRQVTSDFVTIIGFIGMEIEDEN 225
Query: 763 *ISTFKDNNLFLIVHVADDLL*RRKEGKSLIERIHRLVKRIHVLVPQVISVHKAPLSSAF 942
ISTFK NNL ++HVAD+LL* EGK ++ERIH L+K +HVLV VI+V +APL+SAF
Sbjct: 224 QISTFKYNNLLFLIHVADNLL****EGKFVVERIHCLIKCVHVLVS*VINVDEAPLASAF 45
Query: 943 IIAPVVPFSWKVNP 984
II P+V FSWKV+P
Sbjct: 44 IITPIVAFSWKVDP 3
Score = 161 bits (347), Expect = 1e-038
Identities = 74/130 (56%), Positives = 85/130 (65%)
Frame = +3 / -1
Query: 558 SSAGC*SSFRAPLAPLQAT*SDPRRGQLFHVHRRPEHQSPGLLCISQANRIPLCSPRKFS 737
S AGC S F A T SDP G LFHVH+ +H+SP L C SQA+ I LC+ +F
Sbjct: 429 SQAGCSSLFWALPVFF*VTSSDPSHGPLFHVHQTSKHRSPELPCTSQASHIRLCNHHRFY 250
Query: 738 WDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGRKISHRAHSSLGQTHSCTCTASDQCP 917
WDGN*++K +LHVQ Q*P SCR*+SAL GRKI RAHS L Q SCTC DQC
Sbjct: 249 WDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGRKICRRAHSLLDQMRSCTCIVGDQCR 70
Query: 918 QGSTVVCIYH 947
+GST VCIYH
Sbjct: 69 RGSTGVCIYH 40
Score = 154 bits (330), Expect = 3e-036
Identities = 80/134 (59%), Positives = 88/134 (65%)
Frame = -3 / +1
Query: 986 NGLTFQEKGTTGAMINADDSGALWTLITCGTST*MRLTKR*MRSMRDFPSFRRQSRSSAT 807
NG TFQEK T G MINAD SGA TLIT TST* L K+*MRS +FPS+ QSR SAT
Sbjct: 1 NGSTFQEKATIGVMINADASGASSTLITYDTST*THLIKQ*MRSTTNFPSYHHQSRLSAT 180
Query: 806 *TMRKRLLSLNVEI*FLFSISIPRKLTRATKWDAICLGNTE*PWTLMLWSSVDMEELATT 627
* ++RLL LNVEI F SISIP K TK D CLG+T * WT ML VDMEE T
Sbjct: 181 *MRKRRLLYLNVEIWFSSSISIPIKPMMVTKSDVTCLGSTR*LWTPML*CLVDMEEWPMT 360
Query: 626 WITSRRLKGCQGCP 585
IT R L+ + CP
Sbjct: 361 RITRRDLEEYRECP 402
Score = 38.2 bits (77), Expect(2) = 6e-073
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2 / +3
Query: 615 TSPEGVPGVPETNFNNRPNSFKVLSPPRT 529
T P +PGVP+TN NNRP+ + ++ P T
Sbjct: 372 T*PRRIPGVPKTNLNNRPD*WGIVGGPGT 458
>gb|BQ472575.1|BQ472575 HB09C02T BC Hordeum vulgare subsp. vulgare cDNA clone HB09C02
5-PRIME, mRNA sequence
Length = 563
Score = 264 bits (571), Expect(2) = 1e-070
Identities = 110/147 (74%), Positives = 121/147 (82%)
Frame = -2 / +3
Query: 888 MNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVIVFERGDLVFVFNFHPKKTYEGYKVG 709
MNAFDQAMNALD++FSFLSSSKQIVSDMN+E+KVIVFERGDLVFVFNFHP KTY+GYKVG
Sbjct: 12 MNAFDQAMNALDDKFSFLSSSKQIVSDMNEEKKVIVFERGDLVFVFNFHPNKTYDGYKVG 191
Query: 708 CDLPGKYRVALDSDALXXXXXXXXXXXXXXFTSPEGVPGVPETNFNNRPNSFKVLSPPRT 529
CDLPGKY+VALDSDAL FTSPEG+PGVPETNFNNRPNSFK+LSPPRT
Sbjct: 192 CDLPGKYKVALDSDALMFGGHGRVAHDSDHFTSPEGIPGVPETNFNNRPNSFKILSPPRT 371
Query: 528 CVAYYRVDEAGAGRRLHAKAETGKTSP 448
CVAYYRV+E + A GKT+P
Sbjct: 372 CVAYYRVEEKAEKPKDGGAAFWGKTAP 452
Score = 248 bits (537), Expect = 8e-065
Identities = 105/121 (86%), Positives = 110/121 (90%)
Frame = +2 / -2
Query: 527 QVRGGERTLNEFGRLLKFVSGTPGTPSGDVK*STSWPTLPCPPKTRASESRATLYFPGKS 706
QVRGG++ LNE GRLLKFVSGTPG PSGDVK*S SW TLPCPP +ASESRATLYFPGKS
Sbjct: 373 QVRGGDKILNELGRLLKFVSGTPGIPSGDVK*SESWATLPCPPNIKASESRATLYFPGKS 194
Query: 707 HPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERKENLSSSAFIAWSNAF 886
HPTL*PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RKENLSSSAFIA SNAF
Sbjct: 193 HPTL*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRKENLSSSAFIA*SNAF 14
Query: 887 M 889
M
Sbjct: 13 M 11
Score = 166 bits (356), Expect = 8e-040
Identities = 74/132 (56%), Positives = 88/132 (66%)
Frame = -1 / +2
Query: 889 HECV*PSDECAR*EIFLPFVVKADRQRHER*GKGYCL*TWRFSFCFQFPSQENLRGLQSG 710
HE +* S+ECAR +IFLP ++KAD QRHE +GYC+*TWR F QFPSQ NL LQS
Sbjct: 11 HERI*SSNECARRQIFLPIIIKADCQRHE*GKEGYCI*TWRSGFRLQFPSQ*NL*WLQSR 190
Query: 709 MRFAWEIQSSPGL*CSGLRWTWKSWPRRGSLHVA*RGARGARNELQQPAELVQSPFSAPH 530
M AWE+Q S GL C + WTWKS P GSLH+ *R RN+LQQP L+Q+ S +
Sbjct: 191 M*LAWEVQGSSGLRCFDVWWTWKSGP*LGSLHIT*RNTGSTRNKLQQPP*LIQNLVSTSY 370
Query: 529 LCGLLPCRRSRG 494
LCGLL R G
Sbjct: 371 LCGLLSRRGKSG 406
Score = 146 bits (314), Expect = 5e-034
Identities = 71/132 (53%), Positives = 82/132 (62%)
Frame = +3 / -3
Query: 495 PLLRLHGNKPHRCGAEKGL*TSSAGC*SSFRAPLAPLQAT*SDPRRGQLFHVHRRPEHQS 674
PL +KPHR E * S GC*S FR LQ *SDP G LFHVH+ +H+S
Sbjct: 405 PLFPRRDSKPHRYEVETRF*MS*GGC*SLFRVLPVFLQVM*SDPSHGPLFHVHQTSKHRS 226
Query: 675 PGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGRKISH 854
P L C SQA+ I LC+ +F WDGN*++K +LHVQ Q*P SCR*+SAL GRKI
Sbjct: 225 PELPCTSQASHIRLCNHHRFYWDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGRKICR 46
Query: 855 RAHSSLGQTHSC 890
RAHS L Q SC
Sbjct: 45 RAHSLLDQMRSC 10
Score = 145 bits (312), Expect = 9e-034
Identities = 66/129 (51%), Positives = 88/129 (68%)
Frame = +1 / -1
Query: 502 FVYTVISHTGAGRRKDFXXXXXXXXXXFGHPWHPFRRREVIHVVANSSMSTEDQSIRVQG 681
F+ ++SHTG R+DF FG+ + FR EVI V+ +SSMST+ QSI VQ
Sbjct: 398 FLDAIVSHTGTRWRQDFE*VRAVVEVCFGYSRYSFR*CEVIRVMGHSSMSTKHQSIGVQS 219
Query: 682 YSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFLIVHVADDLL*RRKEGKSLIER 861
Y V PRQ+ S FV ++ F+GMEIE++N ISTFK NNL ++HVAD+LL* EGK ++ER
Sbjct: 218 YLVLPRQVTSDFVTIIGFIGMEIEDENQISTFKYNNLLFLIHVADNLL****EGKFVVER 39
Query: 862 IHRLVKRIH 888
IH L+K +H
Sbjct: 38 IHCLIKCVH 12
Score = 111 bits (238), Expect = 1e-023
Identities = 61/120 (50%), Positives = 68/120 (56%)
Frame = -3 / +1
Query: 878 LTKR*MRSMRDFPSFRRQSRSSAT*TMRKRLLSLNVEI*FLFSISIPRKLTRATKWDAIC 699
L K+*MRS +FPS+ QSR SAT* ++RLL LNVEI F SISIP K TK D C
Sbjct: 22 LIKQ*MRSTTNFPSYHHQSRLSAT*MRKRRLLYLNVEIWFSSSISIPIKPMMVTKSDVTC 201
Query: 698 LGNTE*PWTLMLWSSVDMEELATTWITSRRLKGCQGCPXXXXXXXXXXXXSFLRPAPVWL 519
LG+T * WT ML VDMEE T ITS LK + P S L PVWL
Sbjct: 202 LGSTR*LWTPML*CLVDMEEWPMTRITSHHLKEYREYPKQTSTTALTHSKSCLHLVPVWL 381
Score = 24.4 bits (47), Expect(2) = 1e-070
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / +3
Query: 438 IDVKASRASSKEDKEATAGGKK 373
IDV+A+ D EAT+G +K
Sbjct: 459 IDVEATGVKDATDGEATSGSEK 524
>gb|BU986318.1|BU986318 HF11G13r HF Hordeum vulgare subsp. vulgare cDNA clone HF11G13
5-PRIME, mRNA sequence
Length = 542
Score = 262 bits (566), Expect(2) = 6e-070
Identities = 109/146 (74%), Positives = 120/146 (82%)
Frame = -2 / +2
Query: 885 NAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVIVFERGDLVFVFNFHPKKTYEGYKVGC 706
NAFDQAMNALD++FSFLSSSKQIVSDMN+E+KVIVFERGDLVFVFNFHP KTY+GYKVGC
Sbjct: 11 NAFDQAMNALDDKFSFLSSSKQIVSDMNEEKKVIVFERGDLVFVFNFHPNKTYDGYKVGC 190
Query: 705 DLPGKYRVALDSDALXXXXXXXXXXXXXXFTSPEGVPGVPETNFNNRPNSFKVLSPPRTC 526
DLPGKY+VALDSDAL FTSPEG+PGVPETNFNNRPNSFK+LSPPRTC
Sbjct: 191 DLPGKYKVALDSDALMFGGHGRVAHDSDHFTSPEGIPGVPETNFNNRPNSFKILSPPRTC 370
Query: 525 VAYYRVDEAGAGRRLHAKAETGKTSP 448
VAYYRV+E + A GKT+P
Sbjct: 371 VAYYRVEEKAEKPKDGGAAFWGKTAP 448
Score = 247 bits (534), Expect = 2e-064
Identities = 104/121 (85%), Positives = 110/121 (90%)
Frame = +2 / -3
Query: 527 QVRGGERTLNEFGRLLKFVSGTPGTPSGDVK*STSWPTLPCPPKTRASESRATLYFPGKS 706
QVRGG++ LNE GRLLKFVSGTPG PSGDVK*S SW TLPCPP +ASESRATLYFPGKS
Sbjct: 369 QVRGGDKILNELGRLLKFVSGTPGIPSGDVK*SESWATLPCPPNIKASESRATLYFPGKS 190
Query: 707 HPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERKENLSSSAFIAWSNAF 886
HPTL*PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RKENLSSSAFIA SNAF
Sbjct: 189 HPTL*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRKENLSSSAFIA*SNAF 10
Query: 887 M 889
+
Sbjct: 9 L 7
Score = 162 bits (348), Expect = 1e-038
Identities = 73/131 (55%), Positives = 87/131 (66%)
Frame = -1 / +1
Query: 886 ECV*PSDECAR*EIFLPFVVKADRQRHER*GKGYCL*TWRFSFCFQFPSQENLRGLQSGM 707
E +* S+ECAR +IFLP ++KAD QRHE +GYC+*TWR F QFPSQ NL LQS M
Sbjct: 10 ERI*SSNECARRQIFLPIIIKADCQRHE*GKEGYCI*TWRSGFRLQFPSQ*NL*WLQSRM 189
Query: 706 RFAWEIQSSPGL*CSGLRWTWKSWPRRGSLHVA*RGARGARNELQQPAELVQSPFSAPHL 527
AWE+Q S GL C + WTWKS P GSLH+ *R RN+LQQP L+Q+ S +L
Sbjct: 190 *LAWEVQGSSGLRCFDVWWTWKSGP*LGSLHIT*RNTGSTRNKLQQPP*LIQNLVSTSYL 369
Query: 526 CGLLPCRRSRG 494
CGLL R G
Sbjct: 370 CGLLSRRGKSG 402
Score = 142 bits (305), Expect = 8e-033
Identities = 70/131 (53%), Positives = 81/131 (61%)
Frame = +3 / -1
Query: 495 PLLRLHGNKPHRCGAEKGL*TSSAGC*SSFRAPLAPLQAT*SDPRRGQLFHVHRRPEHQS 674
PL +KPHR E * S GC*S FR LQ *SDP G LFHVH+ +H+S
Sbjct: 401 PLFPRRDSKPHRYEVETRF*MS*GGC*SLFRVLPVFLQVM*SDPSHGPLFHVHQTSKHRS 222
Query: 675 PGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGRKISH 854
P L C SQA+ I LC+ +F WDGN*++K +LHVQ Q*P SCR*+SAL GRKI
Sbjct: 221 PELPCTSQASHIRLCNHHRFYWDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGRKICR 42
Query: 855 RAHSSLGQTHS 887
RAHS L Q S
Sbjct: 41 RAHSLLDQMRS 9
Score = 142 bits (304), Expect = 1e-032
Identities = 65/126 (51%), Positives = 86/126 (68%)
Frame = +1 / -2
Query: 502 FVYTVISHTGAGRRKDFXXXXXXXXXXFGHPWHPFRRREVIHVVANSSMSTEDQSIRVQG 681
F+ ++SHTG R+DF FG+ + FR EVI V+ +SSMST+ QSI VQ
Sbjct: 394 FLDAIVSHTGTRWRQDFE*VRAVVEVCFGYSRYSFR*CEVIRVMGHSSMSTKHQSIGVQS 215
Query: 682 YSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFLIVHVADDLL*RRKEGKSLIER 861
Y V PRQ+ S FV ++ F+GMEIE++N ISTFK NNL ++HVAD+LL* EGK ++ER
Sbjct: 214 YLVLPRQVTSDFVTIIGFIGMEIEDENQISTFKYNNLLFLIHVADNLL****EGKFVVER 35
Query: 862 IHRLVK 879
IH L+K
Sbjct: 34 IHCLIK 17
Score = 111 bits (238), Expect = 1e-023
Identities = 61/120 (50%), Positives = 68/120 (56%)
Frame = -3 / +3
Query: 878 LTKR*MRSMRDFPSFRRQSRSSAT*TMRKRLLSLNVEI*FLFSISIPRKLTRATKWDAIC 699
L K+*MRS +FPS+ QSR SAT* ++RLL LNVEI F SISIP K TK D C
Sbjct: 18 LIKQ*MRSTTNFPSYHHQSRLSAT*MRKRRLLYLNVEIWFSSSISIPIKPMMVTKSDVTC 197
Query: 698 LGNTE*PWTLMLWSSVDMEELATTWITSRRLKGCQGCPXXXXXXXXXXXXSFLRPAPVWL 519
LG+T * WT ML VDMEE T ITS LK + P S L PVWL
Sbjct: 198 LGSTR*LWTPML*CLVDMEEWPMTRITSHHLKEYREYPKQTSTTALTHSKSCLHLVPVWL 377
Score = 24.4 bits (47), Expect(2) = 6e-070
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / +2
Query: 438 IDVKASRASSKEDKEATAGGKK 373
IDV+A+ D EAT+G +K
Sbjct: 455 IDVEATGVKDATDGEATSGSEK 520
>gb|BF065047.1|BF065047 HV_CEb0022L05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022L05f, mRNA sequence
Length = 825
Score = 151 bits (324), Expect(2) = 6e-069
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 265 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVI 444
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
+FERGDLVFVFNFH ++ Y+VGC PGKY+VALDSD
Sbjct: 445 IFERGDLVFVFNFHWSNSFFDYRVGCSKPGKYKVALDSD 561
Score = 132 bits (282), Expect(2) = 6e-069
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = -2 / +1
Query: 1173 VGDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFG 994
VGDKTIAF LMDK+MY M+ +P++P IDRGIAL KMI +TM LGG+GYLNFMGNEFG
Sbjct: 22 VGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFG 201
Query: 993 HPEWIDFPR 967
HPEWIDFPR
Sbjct: 202 HPEWIDFPR 228
Score = 111 bits (236), Expect(2) = 6e-039
Identities = 61/117 (52%), Positives = 70/117 (59%)
Frame = +2 / -2
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT TKSP SK IT
Sbjct: 614 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SKKLLLQWKLKTNTKSPLSKMITL 435
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SSS T D SS IA SN+ + Y + S S R + R HLS*L L P
Sbjct: 434 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLLP 264
Score = 72.1 bits (151), Expect(2) = 6e-039
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +1 / -1
Query: 970 WKVNPFWVTKLISHKIQVAITSKGHCDEVNHLLECNPSINCR*SRLQV*HASVHFLVHQE 1149
WK+ PF + KLISH+I++A + H D+ +H + C +IN R R H +H L+HQ
Sbjct: 225 WKIYPFRMPKLISHEIKIAFAT*THGDKPDHFM*CYATINARG*RSIQSHEIIHILIHQP 46
Query: 1150 KCNSFVANN 1176
+CNS V N+
Sbjct: 45 ECNSLVTNS 19
>gb|BU967331.1|BU967331 HB03P08r BC Hordeum vulgare subsp. vulgare cDNA clone HB03P08
5-PRIME, mRNA sequence
Length = 537
Score = 261 bits (564), Expect = 2e-068
Identities = 100/164 (60%), Positives = 123/164 (75%)
Frame = -2 / +2
Query: 1758 SNNVTDGLNGYDVGQSTQESYFHAGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWLDEF 1579
S++ + L+G + T YFH G RG+H +WDSRLFNY +WEVLRFLLSN R+WL+E+
Sbjct: 29 SHSSNNTLDGLNGFDGTDTHYFHGGPRGHHWMWDSRLFNYGSWEVLRFLLSNARWWLEEY 208
Query: 1578 MFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDAVVYMMLANHLMHKLLPEATV 1399
FDGFRFDGVTSM+Y HHG+ + FTGNY EYF T VDAVVY+ML N L+H L P+A
Sbjct: 209 KFDGFRFDGVTSMMYTHHGLQMTFTGNYGEYFGFATDVDAVVYLMLVNDLIHGLYPDAVS 388
Query: 1398 VAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDS 1267
+ EDVSGMP C PV +GGVGFDYRL MA+ D+WI+ LK D+S
Sbjct: 389 IGEDVSGMPTFCIPVPDGGVGFDYRLHMAVADKWIELLKQSDES 520
Score = 149 bits (320), Expect = 7e-035
Identities = 73/123 (59%), Positives = 85/123 (69%)
Frame = +2 / -1
Query: 1268 ESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASI 1447
+SSL R SIHLS AI RR*S PTPPS TG Q G+P TSS ASG S I+ SI
Sbjct: 519 DSSLCLRSSIHLSATAICRR*SKPTPPSGTGMQNVGIPLTSSPMDTASG*SP*IRSLTSI 340
Query: 1448 M*TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNT 1627
*TTAST+V+ KYS *FPVN PW* Y ++VTPSNR PSN+ SS+ +L + +NLNT
Sbjct: 339 K*TTASTSVANPKYSP*FPVNVICNPW*VYIMEVTPSNRNPSNLYSSSHHLAFDSKNLNT 160
Query: 1628 SQL 1636
SQL
Sbjct: 159 SQL 151
Score = 75.8 bits (159), Expect(2) = 8e-021
Identities = 53/129 (41%), Positives = 65/129 (50%)
Frame = -3 / +3
Query: 1673 IINFGIVGCSTMLTGRY*GFFFLT*DIGWMNSCLMASDLMELHQCCIITMVSMWGLLETT 1494
II GI+ CSTM G+Y* + T D G N LM DLM CI+TM LL T
Sbjct: 114 IIGCGILVCSTMGVGKY*DSYCQTRDGGLKNISLMDFDLMG*LP*CILTMDYK*HLLGTM 293
Query: 1493 RNISVWTQLWMQLFT*CLQTI*CTNSCQKQLLLLKMFQACRSFAGQLMKVGLGLTIAWQW 1314
+I + M+ FT*C TI* + + L+KM C FA V L LTIA W
Sbjct: 294 ASILDSPLMLMRWFT*CWSTI*FMDFIRMLYPLVKMSAECLHFASLSQMVVLVLTIACIW 473
Query: 1313 LSLIDGLTT 1287
L I+GL +
Sbjct: 474 L*QINGLNS 500
Score = 46.4 bits (95), Expect(2) = 8e-021
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 1785 LMDVVHSHASNNVTDGLNGYD 1723
LMD+VHSH+SNN DGLNG+D
Sbjct: 11 LMDIVHSHSSNNTLDGLNGFD 73
>gb|BU968310.1|BU968310 HB07C02r BC Hordeum vulgare subsp. vulgare cDNA clone HB07C02
5-PRIME, mRNA sequence
Length = 421
Score = 259 bits (559), Expect = 8e-068
Identities = 105/129 (81%), Positives = 114/129 (88%)
Frame = -2 / +3
Query: 888 MNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVIVFERGDLVFVFNFHPKKTYEGYKVG 709
MNAFDQAMNALD++FSFLSSSKQIVSDMN+E+KVIVFERGDLVFVFNFHP KTY+GYKVG
Sbjct: 12 MNAFDQAMNALDDKFSFLSSSKQIVSDMNEEKKVIVFERGDLVFVFNFHPNKTYDGYKVG 191
Query: 708 CDLPGKYRVALDSDALXXXXXXXXXXXXXXFTSPEGVPGVPETNFNNRPNSFKVLSPPRT 529
CDLPGKY+VALDSDAL FTSPEG+PGVPETNFNNRPNSFK+LSPPRT
Sbjct: 192 CDLPGKYKVALDSDALMFGGHGRVAHDSDHFTSPEGIPGVPETNFNNRPNSFKILSPPRT 371
Query: 528 CVAYYRVDE 502
CVAYYRV+E
Sbjct: 372 CVAYYRVEE 398
Score = 248 bits (537), Expect = 8e-065
Identities = 105/121 (86%), Positives = 110/121 (90%)
Frame = +2 / -1
Query: 527 QVRGGERTLNEFGRLLKFVSGTPGTPSGDVK*STSWPTLPCPPKTRASESRATLYFPGKS 706
QVRGG++ LNE GRLLKFVSGTPG PSGDVK*S SW TLPCPP +ASESRATLYFPGKS
Sbjct: 373 QVRGGDKILNELGRLLKFVSGTPGIPSGDVK*SESWATLPCPPNIKASESRATLYFPGKS 194
Query: 707 HPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERKENLSSSAFIAWSNAF 886
HPTL*PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RKENLSSSAFIA SNAF
Sbjct: 193 HPTL*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRKENLSSSAFIA*SNAF 14
Query: 887 M 889
M
Sbjct: 13 M 11
Score = 166 bits (356), Expect = 8e-040
Identities = 74/132 (56%), Positives = 88/132 (66%)
Frame = -1 / +2
Query: 889 HECV*PSDECAR*EIFLPFVVKADRQRHER*GKGYCL*TWRFSFCFQFPSQENLRGLQSG 710
HE +* S+ECAR +IFLP ++KAD QRHE +GYC+*TWR F QFPSQ NL LQS
Sbjct: 11 HERI*SSNECARRQIFLPIIIKADCQRHE*GKEGYCI*TWRSGFRLQFPSQ*NL*WLQSR 190
Query: 709 MRFAWEIQSSPGL*CSGLRWTWKSWPRRGSLHVA*RGARGARNELQQPAELVQSPFSAPH 530
M AWE+Q S GL C + WTWKS P GSLH+ *R RN+LQQP L+Q+ S +
Sbjct: 191 M*LAWEVQGSSGLRCFDVWWTWKSGP*LGSLHIT*RNTGSTRNKLQQPP*LIQNLVSTSY 370
Query: 529 LCGLLPCRRSRG 494
LCGLL R G
Sbjct: 371 LCGLLSRRGKSG 406
Score = 146 bits (314), Expect = 5e-034
Identities = 71/132 (53%), Positives = 82/132 (62%)
Frame = +3 / -2
Query: 495 PLLRLHGNKPHRCGAEKGL*TSSAGC*SSFRAPLAPLQAT*SDPRRGQLFHVHRRPEHQS 674
PL +KPHR E * S GC*S FR LQ *SDP G LFHVH+ +H+S
Sbjct: 405 PLFPRRDSKPHRYEVETRF*MS*GGC*SLFRVLPVFLQVM*SDPSHGPLFHVHQTSKHRS 226
Query: 675 PGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGRKISH 854
P L C SQA+ I LC+ +F WDGN*++K +LHVQ Q*P SCR*+SAL GRKI
Sbjct: 225 PELPCTSQASHIRLCNHHRFYWDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGRKICR 46
Query: 855 RAHSSLGQTHSC 890
RAHS L Q SC
Sbjct: 45 RAHSLLDQMRSC 10
Score = 145 bits (312), Expect = 9e-034
Identities = 66/129 (51%), Positives = 88/129 (68%)
Frame = +1 / -3
Query: 502 FVYTVISHTGAGRRKDFXXXXXXXXXXFGHPWHPFRRREVIHVVANSSMSTEDQSIRVQG 681
F+ ++SHTG R+DF FG+ + FR EVI V+ +SSMST+ QSI VQ
Sbjct: 398 FLDAIVSHTGTRWRQDFE*VRAVVEVCFGYSRYSFR*CEVIRVMGHSSMSTKHQSIGVQS 219
Query: 682 YSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFLIVHVADDLL*RRKEGKSLIER 861
Y V PRQ+ S FV ++ F+GMEIE++N ISTFK NNL ++HVAD+LL* EGK ++ER
Sbjct: 218 YLVLPRQVTSDFVTIIGFIGMEIEDENQISTFKYNNLLFLIHVADNLL****EGKFVVER 39
Query: 862 IHRLVKRIH 888
IH L+K +H
Sbjct: 38 IHCLIKCVH 12
Score = 111 bits (238), Expect = 1e-023
Identities = 61/120 (50%), Positives = 68/120 (56%)
Frame = -3 / +1
Query: 878 LTKR*MRSMRDFPSFRRQSRSSAT*TMRKRLLSLNVEI*FLFSISIPRKLTRATKWDAIC 699
L K+*MRS +FPS+ QSR SAT* ++RLL LNVEI F SISIP K TK D C
Sbjct: 22 LIKQ*MRSTTNFPSYHHQSRLSAT*MRKRRLLYLNVEIWFSSSISIPIKPMMVTKSDVTC 201
Query: 698 LGNTE*PWTLMLWSSVDMEELATTWITSRRLKGCQGCPXXXXXXXXXXXXSFLRPAPVWL 519
LG+T * WT ML VDMEE T ITS LK + P S L PVWL
Sbjct: 202 LGSTR*LWTPML*CLVDMEEWPMTRITSHHLKEYREYPKQTSTTALTHSKSCLHLVPVWL 381
>gb|BU967173.1|BU967173 HB03H24r BC Hordeum vulgare subsp. vulgare cDNA clone HB03H24
5-PRIME, mRNA sequence
Length = 625
Score = 236 bits (510), Expect(2) = 4e-065
Identities = 89/135 (65%), Positives = 108/135 (80%)
Frame = -2 / +1
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRA 1948
PY+G+++DPP E+Y FKHP+P +P + RIYE HVGMS +P ++TY F D VLPRI+
Sbjct: 196 PYNGIYYDPPEEEKYVFKHPQPKRPKSLRIYETHVGMSSPEPKINTYANFRDEVLPRIKR 375
Query: 1947 NNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVH 1768
YN VQ+MA+ EHSYY SFGYHVTNFFA SSR G+PEDLK L+D+AH LGL VLMDVVH
Sbjct: 376 LGYNAVQIMAIQEHSYYGSFGYHVTNFFAPSSRFGSPEDLKSLIDRAHELGLLVLMDVVH 555
Query: 1767 SHASNNVTDGLNGYD 1723
SHAS+N DGLNG+D
Sbjct: 556 SHASSNTLDGLNGFD 600
Score = 125 bits (268), Expect = 1e-027
Identities = 69/126 (54%), Positives = 75/126 (59%)
Frame = +2 / -3
Query: 1730 PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRSSGVPDLLLTAKKFVTWYPKEA*YEC 1909
PFKPS LL A L TTSIRT KP ALS + +SSG P LL AKK VTWYPK *YEC
Sbjct: 593 PFKPSKVLLDA*L*TTSIRTSKPSS*ALSIKDFKSSGDPKRLLGAKKLVTWYPKLP*YEC 414
Query: 1910 SITAIN*TVL*LFARMRGNTLSANSLYVLTAGFSPLIPTWAS*IRGAAGFEGRGCLNVYL 2089
S AI *T L + G+T S YVL G L+PT S IR G G GCLN Y
Sbjct: 413 SWIAII*TALYPSLLILGSTSSLKFAYVLIFGSGLLMPTCVSYIRNDFGRLG*GCLNTYF 234
Query: 2090 SEAGGS 2107
S +GGS
Sbjct: 233 SSSGGS 216
Score = 34.1 bits (68), Expect(2) = 4e-065
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2 / +1
Query: 2262 DHVKGKPAIPHNSKVKFRFLHGGVWVDRIPALIRYA 2155
++ G P IPH S+VK R D IPA I+Y+
Sbjct: 67 NNADGSPPIPHGSRVKVRMDTPSGTKDSIPAWIKYS 174
>gb|BU986646.1|BU986646 HF12I02r HF Hordeum vulgare subsp. vulgare cDNA clone HF12I02
5-PRIME, mRNA sequence
Length = 623
Score = 235 bits (507), Expect(2) = 3e-062
Identities = 86/135 (63%), Positives = 110/135 (81%)
Frame = -2 / +1
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRA 1948
P++G+++DPP E+Y F+HP+P +P + RIYE+H+GMS +P +++Y F D VLPRI+
Sbjct: 103 PFNGIYYDPPEEEKYVFQHPQPKRPESLRIYESHIGMSSPEPKINSYANFRDEVLPRIKR 282
Query: 1947 NNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVH 1768
YN VQ+MA+ EHSYYASFGYHVTNFFA SSR GTPEDLK L+D+AH LGL VLMD+VH
Sbjct: 283 LGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVH 462
Query: 1767 SHASNNVTDGLNGYD 1723
SH+SNN DGLNG+D
Sbjct: 463 SHSSNNTLDGLNGFD 507
Score = 113 bits (241), Expect(2) = 1e-025
Identities = 63/126 (50%), Positives = 69/126 (54%)
Frame = +2 / -1
Query: 1730 PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRSSGVPDLLLTAKKFVTWYPKEA*YEC 1909
PFKPS L L T SIRT KP CALS + +SSGVP LL AKK VTWYPK A*YEC
Sbjct: 500 PFKPSRVLFDE*L*TISIRTSKPSSCALSIKDFKSSGVPKRLLGAKKLVTWYPKLA*YEC 321
Query: 1910 SITAIN*TVL*LFARMRGNTLSANSLYVLTAGFSPLIPTWAS*IRGAAGFEGRGCLNVYL 2089
S AI T L + G+T S Y G LIP S I +G G GC Y
Sbjct: 320 SWIAIICTALYPSLLILGSTSSLKLAYEFIFGSGLLIPMCDSYILSDSGRLG*GCWKTYF 141
Query: 2090 SEAGGS 2107
S +GGS
Sbjct: 140 SSSGGS 123
Score = 25.8 bits (50), Expect(2) = 3e-062
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 1673 IINFGIVGCSTMLTGRY*GFFFLT 1602
II GI+ CSTM G+Y* + T
Sbjct: 548 IIGCGILVCSTMGVGKY*DSYCQT 619
Score = 25.4 bits (49), Expect(2) = 1e-025
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1 / -3
Query: 1621 *YLPVSIVEQPTIPKFMITSISRMKIGLLGAL 1716
*Y P IVEQ IP M+ + + +++ + A+
Sbjct: 600 *YFPTPIVEQTRIPHPMMATWTTVEVMCISAI 505
>gb|BG366114.1|BG366114 HVSMEi0005M22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005M22f, mRNA sequence
Length = 933
Score = 235 bits (508), Expect(2) = 6e-062
Identities = 98/134 (73%), Positives = 108/134 (80%)
Frame = -2 / +1
Query: 849 RFSFLSSSKQIVSDMNDEEKVIVFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDS 670
+FSFLSSSKQIVSDMN+E+KVIVFERGDLVFVFNFHP KTY+GYKVGCDLPGKY+VALDS
Sbjct: 1 KFSFLSSSKQIVSDMNEEKKVIVFERGDLVFVFNFHPNKTYDGYKVGCDLPGKYKVALDS 180
Query: 669 DALXXXXXXXXXXXXXXFTSPEGVPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEAGAG 490
DAL FTSPEG+PGVPETNFNNRPNSFK+LSPPRTCVAYYRV+E
Sbjct: 181 DALMFGGHGRVAHDSDHFTSPEGIPGVPETNFNNRPNSFKILSPPRTCVAYYRVEEKAEK 360
Query: 489 RRLHAKAETGKTSP 448
+ A GKT+P
Sbjct: 361 PKDGGAAFWGKTAP 402
Score = 223 bits (482), Expect = 3e-057
Identities = 92/107 (85%), Positives = 97/107 (90%)
Frame = +2 / -2
Query: 527 QVRGGERTLNEFGRLLKFVSGTPGTPSGDVK*STSWPTLPCPPKTRASESRATLYFPGKS 706
QVRGG++ LNE GRLLKFVSGTPG PSGDVK*S SW TLPCPP +ASESRATLYFPGKS
Sbjct: 323 QVRGGDKILNELGRLLKFVSGTPGIPSGDVK*SESWATLPCPPNIKASESRATLYFPGKS 144
Query: 707 HPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTICFDDERKEN 847
HPTL*PS*V LGWKLKTKT+SPRS TITF SSFMSLTICFDD+RKEN
Sbjct: 143 HPTL*PS*VLLGWKLKTKTRSPRSNTITFFSSFMSLTICFDDDRKEN 3
Score = 154 bits (330), Expect = 3e-036
Identities = 68/118 (57%), Positives = 78/118 (66%)
Frame = -1 / +3
Query: 847 IFLPFVVKADRQRHER*GKGYCL*TWRFSFCFQFPSQENLRGLQSGMRFAWEIQSSPGL* 668
IFLP ++KAD QRHE +GYC+*TWR F QFPSQ NL LQS M AWE+Q S GL
Sbjct: 3 IFLPIIIKADCQRHE*GKEGYCI*TWRSGFRLQFPSQ*NL*WLQSRM*LAWEVQGSSGLR 182
Query: 667 CSGLRWTWKSWPRRGSLHVA*RGARGARNELQQPAELVQSPFSAPHLCGLLPCRRSRG 494
C + WTWKS P GSLHV *R RN+LQQP L+Q+ S +LCGLL CR G
Sbjct: 183 CFDVWWTWKSGP*LGSLHVT*RNTGSTRNKLQQPP*LIQNLVSTSYLCGLLSCRGKSG 356
Score = 135 bits (290), Expect = 1e-030
Identities = 65/118 (55%), Positives = 76/118 (64%)
Frame = +3 / -3
Query: 495 PLLRLHGNKPHRCGAEKGL*TSSAGC*SSFRAPLAPLQAT*SDPRRGQLFHVHRRPEHQS 674
PL H +KPHR E * S GC*S FR LQ T*SDP G LFHVH+ +H+S
Sbjct: 355 PLFPRHDSKPHRYEVETRF*MS*GGC*SLFRVLPVFLQVT*SDPSHGPLFHVHQTSKHRS 176
Query: 675 PGLLCISQANRIPLCSPRKFSWDGN*KQKLNLHVQRQ*PFPHRSCR*RSALTTKGRKI 848
P L C SQA+ I LC+ +F WDGN*++K +LHVQ Q*P SCR*+SAL GRKI
Sbjct: 175 PELPCTSQASHIRLCNHHRFYWDGN*RRKPDLHVQIQ*PSFPHSCR*QSALMMIGRKI 2
Score = 133 bits (284), Expect = 7e-030
Identities = 61/115 (53%), Positives = 79/115 (68%)
Frame = +1 / -1
Query: 502 FVYTVISHTGAGRRKDFXXXXXXXXXXFGHPWHPFRRREVIHVVANSSMSTEDQSIRVQG 681
F+ T++SHTG R+DF FG+ + FR REVI V+ +SSMST+ QSI VQ
Sbjct: 348 FLDTIVSHTGTRWRQDFE*VRAVVEVCFGYSRYSFR*REVIRVMGHSSMSTKHQSIGVQS 169
Query: 682 YSVFPRQIASHFVALVSFLGMEIENKN*ISTFKDNNLFLIVHVADDLL*RRKEGK 846
Y V PRQ+ S FV ++ F+GMEIE++N ISTFK NNL ++HVAD+LL* EGK
Sbjct: 168 YLVLPRQVTSDFVTIIGFIGMEIEDENQISTFKYNNLLFLIHVADNLL****EGK 4
Score = 105 bits (224), Expect = 1e-021
Identities = 58/117 (49%), Positives = 65/117 (55%)
Frame = -3 / +2
Query: 848 DFPSFRRQSRSSAT*TMRKRLLSLNVEI*FLFSISIPRKLTRATKWDAICLGNTE*PWTL 669
+FPS+ QSR SAT* ++RLL LNVEI F SISIP K TK D CLG+T * WT
Sbjct: 2 NFPSYHHQSRLSAT*MRKRRLLYLNVEIWFSSSISIPIKPMMVTKSDVTCLGSTR*LWTP 181
Query: 668 MLWSSVDMEELATTWITSRRLKGCQGCPXXXXXXXXXXXXSFLRPAPVWLITV*TKQ 498
ML VDMEE T ITSR LK + P S L PVWL V K+
Sbjct: 182 ML*CLVDMEEWPMTRITSRHLKEYREYPKQTSTTALTHSKSCLHLVPVWLTIVSRKK 352
Score = 24.4 bits (47), Expect(2) = 6e-062
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2 / +1
Query: 438 IDVKASRASSKEDKEATAGGKK 373
IDV+A+ D EAT+G +K
Sbjct: 409 IDVEATGVKDATDGEATSGSEK 474
>gb|AV914376.1|AV914376 AV914376 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5o11 5', mRNA sequence
Length = 471
Score = 169 bits (363), Expect(2) = 2e-056
Identities = 65/89 (73%), Positives = 76/89 (85%)
Frame = -2 / +3
Query: 1233 TNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIH 1054
TNRR+ EKC+ YAESHDQ++ GDKTIAF LMDK+MY M+ +P++P IDRGIAL KMI
Sbjct: 3 TNRRWLEKCVTYAESHDQALXGDKTIAFWLMDKDMYDFMALDRPSTPRIDRGIALHKMIR 182
Query: 1053 FITMALGGDGYLNFMGNEFGHPEWIDFPR 967
+TM LGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 183 LVTMGLGGEGYLNFMGNEFGHPEWIDFPR 269
Score = 72.5 bits (152), Expect(2) = 2e-056
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = -2 / +3
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVS 811
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS
Sbjct: 306 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVS 458
>gb|BU970967.1|BU970967 HB16D15r BC Hordeum vulgare subsp. vulgare cDNA clone HB16D15
5-PRIME, mRNA sequence
Length = 411
Score = 218 bits (471), Expect = 1e-055
Identities = 83/126 (65%), Positives = 99/126 (78%)
Frame = -2 / +3
Query: 1644 NYANWEVLRFLLSNLRYWLDEFMFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAV 1465
NY +WEVLRFLLSN R+WL+E+ FDGFRFDGVTSM+Y HHG+ + FTGNY EYF T V
Sbjct: 21 NYGSWEVLRFLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLQMTFTGNYGEYFGFATDV 200
Query: 1464 DAVVYMMLANHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYL 1285
DAVVY+ML N L+H L P+A + EDVSGMP C PV +GGVGFDYRL MA+ D+WI+ L
Sbjct: 201 DAVVYLMLVNDLIHGLYPDAVSIGEDVSGMPTFCIPVPDGGVGFDYRLHMAVADKWIELL 380
Query: 1284 KNKDDS 1267
K D+S
Sbjct: 381 KQSDES 398
Score = 149 bits (320), Expect = 7e-035
Identities = 73/123 (59%), Positives = 85/123 (69%)
Frame = +2 / -3
Query: 1268 ESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASGKSLCIKWFASI 1447
+SSL R SIHLS AI RR*S PTPPS TG Q G+P TSS ASG S I+ SI
Sbjct: 397 DSSLCLRSSIHLSATAICRR*SKPTPPSGTGMQNVGIPLTSSPMDTASG*SP*IRSLTSI 218
Query: 1448 M*TTASTAVSKLKYSW*FPVNPTLIPW**YSIDVTPSNRKPSNMNSSNQYLRLERRNLNT 1627
*TTAST+V+ KYS *FPVN PW* Y ++VTPSNR PSN+ SS+ +L + +NLNT
Sbjct: 217 K*TTASTSVANPKYSP*FPVNVICNPW*VYIMEVTPSNRNPSNLYSSSHHLAFDSKNLNT 38
Query: 1628 SQL 1636
SQL
Sbjct: 37 SQL 29
>gb|BU972445.1|BU972445 HB21K16r BC Hordeum vulgare subsp. vulgare cDNA clone HB21K16
5-PRIME, mRNA sequence
Length = 476
Score = 213 bits (459), Expect = 5e-054
Identities = 82/135 (60%), Positives = 100/135 (74%)
Frame = -2 / +2
Query: 1758 SNNVTDGLNGYDVGQSTQESYFHAGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWLDEF 1579
S++ + L+G + T YFH G RG+H +WDSRLFNY +WEVLRFLLSN R+WL+E+
Sbjct: 68 SHSSNNTLDGLNGFDGTDTHYFHGGPRGHHWMWDSRLFNYGSWEVLRFLLSNARWWLEEY 247
Query: 1578 MFDGFRFDGVTSMLYHHHGINVGFTGNYQEYFSLDTAVDAVVYMMLANHLMHKLLPEATV 1399
FDGFRFDGVTSM+Y HHG+ + FTGNY EYF T VDAVVY+ML N L+H L P+A
Sbjct: 248 KFDGFRFDGVTSMMYTHHGLQMTFTGNYGEYFGFATDVDAVVYLMLVNDLIHGLYPDAVS 427
Query: 1398 VAEDVSGMPVLCRPV 1354
+ EDVSGMP C PV
Sbjct: 428 IGEDVSGMPTFCIPV 472
Score = 108 bits (231), Expect(2) = 3e-028
Identities = 53/94 (56%), Positives = 64/94 (68%)
Frame = +2 / -3
Query: 1355 TGRQRTGMPETSSATTVASGKSLCIKWFASIM*TTASTAVSKLKYSW*FPVNPTLIPW** 1534
TG Q G+P TSS ASG S I+ SI *TTAST+V+ KYS *FPVN PW*
Sbjct: 471 TGMQNVGIPLTSSPMDTASG*SP*IRSLTSIK*TTASTSVANPKYSP*FPVNVICNPW*V 292
Query: 1535 YSIDVTPSNRKPSNMNSSNQYLRLERRNLNTSQL 1636
Y ++VTPSNR PSN+ SS+ +L + +NLNTSQL
Sbjct: 291 YIMEVTPSNRNPSNLYSSSHHLAFDSKNLNTSQL 190
Score = 72.1 bits (151), Expect(2) = 7e-026
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -2 / +2
Query: 1833 DLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYD 1723
DLK L+D+AH LGL VLMD+VHSH+SNN DGLNG+D
Sbjct: 2 DLKSLIDRAHELGLLVLMDIVHSHSSNNTLDGLNGFD 112
Score = 67.0 bits (140), Expect(2) = 7e-026
Identities = 38/97 (39%), Positives = 54/97 (55%)
Frame = -1 / +1
Query: 1663 LG*SAVQLC*LGGIKVSSF*PEILVG*IHV*WLPI*WSYINAVSSPWYQCGVYWKLPGIF 1484
+G S+VQL LG IK+ + E++ I V*W+ I*W + V SPW +YW+L +F
Sbjct: 163 VGFSSVQLWELGSIKILTVKREMVA*RI*V*WISI*WGDFHDVYSPWITNDIYWELWRVF 342
Query: 1483 QFGHSCGCSCLHDACKPFNAQTLARSNCCC*RCFRHA 1373
H C C L +A + N+ TL+ *RC R+A
Sbjct: 343 WIRH*C*CGGLLNAGQRSNSWTLSGCCIHW*RCQRNA 453
Score = 38.2 bits (77), Expect(2) = 3e-028
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2 / -3
Query: 1730 PFKPSVTLLLAWLWTTSIRTRKPKLCALSTRYLRS 1834
PFKPS L L T SIRT KP CALS + +S
Sbjct: 105 PFKPSRVLFDE*L*TISIRTSKPSSCALSIKDFKS 1
>gb|BU966891.1|BU966891 HB02K24r BC Hordeum vulgare subsp. vulgare cDNA clone HB02K24
5-PRIME, mRNA sequence
Length = 550
Score = 138 bits (297), Expect(3) = 6e-049
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = -2 / +3
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRA 1948
P++G+++DPP E+Y F+HP+P +P + RIYE+H+GMS +P +++Y F D VLPRI+
Sbjct: 297 PFNGIYYDPPEEEKYVFQHPQPKRPESLRIYESHIGMSSPEPKINSYANFRDEVLPRIKR 476
Query: 1947 NNYNTVQLMAVMEHSYYASFGYHV 1876
YN VQ+MA+ EHSYYASFGYHV
Sbjct: 477 LGYNAVQIMAIQEHSYYASFGYHV 548
Score = 67.0 bits (140), Expect(3) = 6e-049
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = -2 / +3
Query: 2415 KFGINTNEDGTVYREWAPAAQEAELIGDFNDWNGANHKMEKDKFGVWSI 2269
K G + G YREWAP A A L+GDFN+WN M +D +GVW I
Sbjct: 12 KLGFTRSAKGITYREWAPGAHSAALVGDFNNWNPNADTMTRDDYGVWEI 158
Score = 29.0 bits (57), Expect(3) = 6e-049
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 2262 DHVKGKPAIPHNSKVKFR 2209
++ G PAIPH S+VK R
Sbjct: 168 NNADGSPAIPHGSRVKIR 221
>gb|BE196055.1|BE196055 HVSMEh0091D22f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091D22f, mRNA sequence
Length = 832
Score = 105 bits (223), Expect(2) = 4e-046
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = -2 / +2
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q V+ ++E+KVI
Sbjct: 185 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVTRKHEEDKVI 364
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYR 685
+FERGD+ F NF + Y++ P K R
Sbjct: 365 IFERGDVEFSINFQWNNSIIDYQIRESKPEKTR 463
Score = 101 bits (216), Expect(2) = 4e-046
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2 / +2
Query: 1107 QPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
+P++P IDRGIAL KMI +TM LGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 8 RPSTPRIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPR 148
>gb|BE196057.2|BE196057 HVSMEh0091D24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0091D24f, mRNA sequence
Length = 918
Score = 101 bits (216), Expect(2) = 8e-045
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -2 / +1
Query: 1107 QPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNEFGHPEWIDFPR 967
+P++P IDRGIAL KMI +TM LGG+GYLNFMGNEFGHPEWIDFPR
Sbjct: 4 RPSTPRIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPR 144
Score = 100 bits (214), Expect(2) = 8e-045
Identities = 42/85 (49%), Positives = 56/85 (65%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D L+Y+ M F QAM L+E++ F++S Q V ++E+KVI
Sbjct: 181 GNNNSYDKCRRKFDLGDADFLKYRGMQEFYQAMQHLEEKYGFMTSEHQYVPRKHEEDKVI 360
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVG 709
+FERGD FV NFH Y+ G
Sbjct: 361 IFERGDSSFVVNFHWNNDLIDYREG 435
>gb|BI948738.1|BI948738 HVSMEl0010K17f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010K17f, mRNA sequence
Length = 820
Score = 102 bits (218), Expect(3) = 4e-043
Identities = 40/68 (58%), Positives = 51/68 (75%)
Frame = -2 / +1
Query: 1287 LKNKDDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDL 1108
L + W MG+I HTLTNRR+ EKC+ YAESHDQS+VGDKTIAF LMDK+M ++
Sbjct: 148 LLKQSGESWKMGDIVHTLTNRRWLEKCVTYAESHDQSLVGDKTIAFWLMDKDMSQSIALD 327
Query: 1107 QPASPTID 1084
+P++P ID
Sbjct: 328 KPSTPCID 351
Score = 87.7 bits (185), Expect(3) = 4e-043
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = -2 / +1
Query: 1437 NHLMHKLLPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKDDS 1267
N L+H L P+A + EDVSGMP C PV +GGVGFDYRL MA+ D+WI+ LK +S
Sbjct: 1 NDLIHGLYPDAVSIGEDVSGMPTFCIPVPDGGVGFDYRLHMAVADKWIELLKQSGES 171
Score = 67.0 bits (140), Expect(2) = 1e-023
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = +2 / -3
Query: 1085 SIVGEAGCKSDMPVYISLSIRRNAIVLSPTID*SWLSAYAMHFSVYLLLVKVCAISPI 1258
S+ G G M ISLSI +NAIVLSPT D*S LSA HFS +LL V+VC ISPI
Sbjct: 350 SMQGVEGLSRAMD*DISLSINQNAIVLSPTSD*S*LSA*VTHFSSHLLFVRVCTISPI 177
Score = 64.3 bits (134), Expect(2) = 1e-023
Identities = 30/49 (61%), Positives = 32/49 (65%)
Frame = +2 / -3
Query: 1268 ESSLFFR*SIHLSGIAIARR*SNPTPPSSTGRQRTGMPETSSATTVASG 1414
+S L R SIHLS AI RR*S PTPPS TG Q G+P TSS ASG
Sbjct: 170 DSPLCLRSSIHLSATAICRR*SKPTPPSGTGMQNVGIPLTSSPMDTASG 24
Score = 24.9 bits (48), Expect(3) = 4e-043
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 1083 RGIALQKMIHFITMA 1039
RGIA KMI +TMA
Sbjct: 353 RGIASHKMIRLVTMA 397
>gb|CV060106.1|CV060106 BNEL54e11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL54e11 5' similar to probable
1,4-alpha-glucan branching enzyme, mRNA sequence
Length = 612
Score = 151 bits (324), Expect(2) = 2e-042
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2 / +3
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 81 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVI 260
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
+FERGDLVFVFNFH ++ Y+VGC PGKY+VALDSD
Sbjct: 261 IFERGDLVFVFNFHWSNSFFDYRVGCSKPGKYKVALDSD 377
Score = 111 bits (236), Expect(2) = 2e-024
Identities = 61/117 (52%), Positives = 70/117 (59%)
Frame = +2 / -3
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT TKSP SK IT
Sbjct: 430 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SKKLLLQWKLKTNTKSPLSKMITL 251
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SSS T D SS IA SN+ + Y + S S R + R HLS*L L P
Sbjct: 250 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLLP 80
Score = 43.2 bits (88), Expect(2) = 2e-042
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / +3
Query: 1008 GNEFGHPEWIDFPR 967
GNEFGHPEWIDFPR
Sbjct: 3 GNEFGHPEWIDFPR 44
Score = 23.1 bits (44), Expect(2) = 2e-024
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 970 WKVNPFWVTKLIS 1008
WK+ PF + KLIS
Sbjct: 41 WKIYPFRMPKLIS 3
>gb|CA030569.1|CA030569 HX07H03r HX Hordeum vulgare subsp. vulgare cDNA clone HX07H03
5-PRIME, mRNA sequence
Length = 647
Score = 151 bits (324), Expect(2) = 6e-042
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2 / +3
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 81 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVI 260
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
+FERGDLVFVFNFH ++ Y+VGC PGKY+VALDSD
Sbjct: 261 IFERGDLVFVFNFHWSNSFFDYRVGCSKPGKYKVALDSD 377
Score = 113 bits (242), Expect(2) = 3e-025
Identities = 62/117 (52%), Positives = 71/117 (60%)
Frame = +2 / -2
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT TKSP SK IT
Sbjct: 430 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SKKLLLQWKLKTNTKSPLSKMITL 251
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SSS T D SS IA SN+ + Y + S S R + R HLS*L LFP
Sbjct: 250 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLFP 80
Score = 41.8 bits (85), Expect(2) = 6e-042
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = -2 / +1
Query: 1011 MGNEFGHPEWIDFP 970
+GNEFGHPEWIDFP
Sbjct: 1 LGNEFGHPEWIDFP 42
Score = 23.1 bits (44), Expect(2) = 3e-025
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 970 WKVNPFWVTKLIS 1008
WK+ PF + KLIS
Sbjct: 42 WKIYPFRMPKLIS 4
>gb|AV913706.1|AV913706 AV913706 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23a09 5', mRNA sequence
Length = 556
Score = 96.8 bits (205), Expect(3) = 2e-041
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = -2 / +1
Query: 2517 FKDHFRYRMKRFLEQKGSIEENEGSLESFSKGYLKFGINTNEDGTVYREWAPAAQEAELI 2338
F + YR + + +I+++EG LE FS+GY K G + G YREWAP A A L+
Sbjct: 4 FSEPLDYRYSEYKRIRAAIDQHEGGLEVFSRGYEKLGFTRSAKGITYREWAPGAHSAALV 183
Query: 2337 GDFNDWNGANHKMEKDKFGVWSI 2269
GDFN+WN M +D +GVW I
Sbjct: 184 GDFNNWNPNADTMTRDDYGVWEI 252
Score = 84.0 bits (177), Expect(3) = 2e-041
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -2 / +1
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMSGEKPAVSTYREFADNVL 1963
P++G+++DPP E+Y F+HP+P +P + RIYE+H+GMS +P +++Y F D VL
Sbjct: 391 PFNGIYYDPPEEEKYVFQHPQPKRPESLRIYESHIGMSSPEPKINSYANFRDEVL 555
Score = 29.0 bits (57), Expect(3) = 2e-041
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 2262 DHVKGKPAIPHNSKVKFR 2209
++ G PAIPH S+VK R
Sbjct: 262 NNADGSPAIPHGSRVKIR 315
>gb|CB881353.1|CB881353 HM09I19w HM Hordeum vulgare subsp. vulgare cDNA clone HM09I19
3-PRIME, mRNA sequence
Length = 639
Score = 147 bits (315), Expect(3) = 4e-041
Identities = 60/100 (60%), Positives = 75/100 (75%)
Frame = -2 / -1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D + LRY M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 579 GNNNSYDKCRRRFDLGDAEFLRYHGMQQFDQAMQHLEEKYGFMTSDHQYVSRKHEEDKVI 400
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDA 664
VFE+GDLVFVFNFH +Y Y+VGC PGKY+V LDSDA
Sbjct: 399 VFEKGDLVFVFNFHWSNSYFDYRVGCLKPGKYKVVLDSDA 280
Score = 107 bits (228), Expect = 3e-022
Identities = 58/116 (50%), Positives = 66/116 (56%)
Frame = +2 / +2
Query: 641 LPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTI 820
LP PPK+ ASES TLYFPG PT * *+ L WKL T TKSP S TIT SSS T
Sbjct: 257 LPNPPKSPASESNTTLYFPGFKQPTR*SK*LLLQWKLNTNTKSPFSNTITLSSSCFRDTY 436
Query: 821 CFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHS 988
+ D K SS IA SN + Y + S S R + R HLS*L LFP + + S
Sbjct: 437 WWSDVIKPYFSSRCCIA*SNCCIP*YLRNSASPRSNLRRHLS*LLLFPGMNLPVGS 604
Score = 35.0 bits (70), Expect(3) = 4e-041
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 573 NNRPNSFKVLSPPRTCVAY 517
+NRP+SF V +P RTCV Y
Sbjct: 213 DNRPHSFSVYTPSRTCVVY 157
Score = 26.3 bits (51), Expect(3) = 4e-041
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 990 PEWIDFPR 967
PEWIDFPR
Sbjct: 639 PEWIDFPR 616
>gb|BU995206.1|BU995206 HM09I19r HM Hordeum vulgare subsp. vulgare cDNA clone HM09I19
5-PRIME, mRNA sequence
Length = 610
Score = 147 bits (315), Expect(3) = 2e-040
Identities = 60/100 (60%), Positives = 75/100 (75%)
Frame = -2 / +3
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D + LRY M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 63 GNNNSYDKCRRRFDLGDAEFLRYHGMQQFDQAMQHLEEKYGFMTSDHQYVSRKHEEDKVI 242
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSDA 664
VFE+GDLVFVFNFH +Y Y+VGC PGKY+V LDSDA
Sbjct: 243 VFEKGDLVFVFNFHWSNSYFDYRVGCLKPGKYKVVLDSDA 362
Score = 107 bits (228), Expect = 3e-022
Identities = 58/116 (50%), Positives = 66/116 (56%)
Frame = +2 / -1
Query: 641 LPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITFSSSFMSLTI 820
LP PPK+ ASES TLYFPG PT * *+ L WKL T TKSP S TIT SSS T
Sbjct: 385 LPNPPKSPASESNTTLYFPGFKQPTR*SK*LLLQWKLNTNTKSPFSNTITLSSSCFRDTY 206
Query: 821 CFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFPSLGKSIHS 988
+ D K SS IA SN + Y + S S R + R HLS*L LFP + + S
Sbjct: 205 WWSDVIKPYFSSRCCIA*SNCCIP*YLRNSASPRSNLRRHLS*LLLFPGMNLPVGS 38
Score = 35.0 bits (70), Expect(3) = 2e-040
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 573 NNRPNSFKVLSPPRTCVAY 517
+NRP+SF V +P RTCV Y
Sbjct: 429 DNRPHSFSVYTPSRTCVVY 485
Score = 24.0 bits (46), Expect(3) = 2e-040
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 990 PEWIDFP 970
PEWIDFP
Sbjct: 4 PEWIDFP 24
>gb|CV059272.1|CV059272 BNEL46c8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL46c8 5' similar to starch branching enzyme
I, mRNA sequence
Length = 632
Score = 166 bits (356), Expect = 8e-040
Identities = 67/110 (60%), Positives = 78/110 (70%)
Frame = -2 / +3
Query: 2607 ATVQEDKTMATAKGDVDHLPIYDLDPKLEIFKDHFRYRMKRFLEQKGSIEENEGSLESFS 2428
A + + V HLPIYDLDPKL FK+HF YRM+R+L QK IE++EGSLE FS
Sbjct: 303 AETARENKTVATEDGVGHLPIYDLDPKLAEFKNHFNYRMRRYLYQKHLIEKHEGSLEEFS 482
Query: 2427 KGYLKFGINTNEDGTVYREWAPAAQEAELIGDFNDWNGANHKMEKDKFGV 2278
KGYLKFGINT TVYREWAPAA EA+L GDFN+W+G+ H M D GV
Sbjct: 483 KGYLKFGINTEPGATVYREWAPAAMEAQLXGDFNNWDGSEHMMTXDIXGV 632
Score = 124 bits (266), Expect = 2e-027
Identities = 61/110 (55%), Positives = 68/110 (61%)
Frame = +2 / -2
Query: 2279 TPNLSFSILWFAPFQSLKSPISSASCAAGAHSRYTVPSSFVLIPNFK*PLEKDSRLPSFS 2458
TP +S I+ P Q LKSP S AS AAGAHSRYTV VLIPNF+*PLE SRLPS
Sbjct: 631 TPXISXVIMCSEPSQLLKSPXSWASIAAGAHSRYTVAPGSVLIPNFR*PLENSSRLPSCF 452
Query: 2459 SIDPFCSRNLFIRYLKWSLNISSLGSRSYMGRWSTSPLAVAIVLSSCTVA 2608
SI F R L I LKW LN ++ GSRSYMGRW T ++ S A
Sbjct: 451 SIKCFW*RYLLIL*LKWFLNSANFGSRSYMGRWPTPSSVATVLFSRAVSA 302
>gb|BU996927.1|BU996927 HI06F01r HI Hordeum vulgare subsp. vulgare cDNA clone HI06F01
5-PRIME, mRNA sequence
Length = 517
Score = 97.7 bits (207), Expect(3) = 7e-037
Identities = 37/86 (43%), Positives = 51/86 (59%)
Frame = -2 / +3
Query: 2526 LEIFKDHFRYRMKRFLEQKGSIEENEGSLESFSKGYLKFGINTNEDGTVYREWAPAAQEA 2347
L+ F+ YR + + +I+++EG LE FS+GY K G + G YREWAP A A
Sbjct: 3 LKDFRSTLDYRYSEYKRIRAAIDQHEGGLEVFSRGYEKLGFTRSAKGITYREWAPGAHSA 182
Query: 2346 ELIGDFNDWNGANHKMEKDKFGVWSI 2269
L+GDFN+WN M +D +GVW I
Sbjct: 183 ALVGDFNNWNPNADTMTRDDYGVWEI 260
Score = 67.5 bits (141), Expect(3) = 7e-037
Identities = 20/38 (52%), Positives = 32/38 (84%)
Frame = -2 / +3
Query: 2127 PYDGVHWDPPASERYTFKHPRPSKPAAPRIYEAHVGMS 2014
P++G+++DPP E+Y F+HP+P +P + RIYE+H+GMS
Sbjct: 399 PFNGIYYDPPEEEKYVFQHPQPKRPESLRIYESHIGMS 512
Score = 29.0 bits (57), Expect(3) = 7e-037
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 2262 DHVKGKPAIPHNSKVKFR 2209
++ G PAIPH S+VK R
Sbjct: 270 NNADGSPAIPHGSRVKIR 323
>gb|BU994498.1|BU994498 HM07E08r HM Hordeum vulgare subsp. vulgare cDNA clone HM07E08
5-PRIME, mRNA sequence
Length = 630
Score = 131 bits (281), Expect(3) = 8e-036
Identities = 54/93 (58%), Positives = 68/93 (73%)
Frame = -2 / +2
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D + LRY M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 62 GNNNSYDKCRRRFDLGDAEFLRYHGMQQFDQAMQHLEEKYGFMTSDHQYVSRKHEEDKVI 241
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYR 685
VFE+GDLVFVFNFH +Y Y+VGC PGK R
Sbjct: 242 VFEKGDLVFVFNFHWSNSYFDYRVGCLKPGKTR 340
Score = 35.0 bits (70), Expect(3) = 8e-036
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 573 NNRPNSFKVLSPPRTCVAY 517
+NRP+SF V +P RTCV Y
Sbjct: 427 DNRPHSFSVYTPSRTCVVY 483
Score = 24.0 bits (46), Expect(3) = 8e-036
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 990 PEWIDFP 970
PEWIDFP
Sbjct: 4 PEWIDFP 24
>gb|BG366889.2|BG366889 HVSMEi0008N13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008N13f, mRNA sequence
Length = 506
Score = 149 bits (319), Expect(2) = 1e-035
Identities = 59/99 (59%), Positives = 75/99 (75%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 58 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVI 237
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
+FERGD VFVFNFH ++ Y+VGC PGKY+VALDSD
Sbjct: 238 IFERGDXVFVFNFHWSNSFFDYRVGCSKPGKYKVALDSD 354
Score = 108 bits (230), Expect = 2e-022
Identities = 60/117 (51%), Positives = 69/117 (58%)
Frame = +2 / -1
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT T SP SK IT
Sbjct: 407 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SKKLLLQWKLKTNTXSPLSKMITL 228
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SSS T D SS IA SN+ + Y + S S R + R HLS*L L P
Sbjct: 227 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLLP 57
Score = 23.1 bits (44), Expect(2) = 1e-035
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 987 EWIDFPR 967
EWIDFPR
Sbjct: 1 EWIDFPR 21
>gb|BQ755138.1|BQ755138 EBed02_SQ003_N09_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ003_N09 5', mRNA sequence
Length = 658
Score = 151 bits (324), Expect = 2e-035
Identities = 60/99 (60%), Positives = 76/99 (76%)
Frame = -2 / +1
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 22 GNNNSYDKCRRRFDLGDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVI 201
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
+FERGDLVFVFNFH ++ Y+VGC PGKY+VALDSD
Sbjct: 202 IFERGDLVFVFNFHWSNSFFDYRVGCSKPGKYKVALDSD 318
Score = 113 bits (242), Expect = 4e-024
Identities = 62/117 (52%), Positives = 71/117 (60%)
Frame = +2 / -3
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT TKSP SK IT
Sbjct: 371 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SKKLLLQWKLKTNTKSPLSKMITL 192
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*LQLFP 964
SSS T D SS IA SN+ + Y + S S R + R HLS*L LFP
Sbjct: 191 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASPRSNLRRHLS*LLLFP 21
>gb|CB880027.1|CB880027 HM05E08w HM Hordeum vulgare subsp. vulgare cDNA clone HM05E08
3-PRIME, mRNA sequence
Length = 625
Score = 124 bits (266), Expect(3) = 5e-035
Identities = 50/86 (58%), Positives = 64/86 (74%)
Frame = -2 / -2
Query: 963 GNNWSYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVI 784
GNN SYDKCRR++ L D + LRY M FDQAM L+E++ F++S Q VS ++E+KVI
Sbjct: 579 GNNNSYDKCRRRFDLGDAEFLRYHGMQQFDQAMQHLEEKYGFMTSDHQYVSRKHEEDKVI 400
Query: 783 VFERGDLVFVFNFHPKKTYEGYKVGC 706
VFE+GDLVFVFNFH +Y Y+VGC
Sbjct: 399 VFEKGDLVFVFNFHWSNSYFDYRVGC 322
Score = 35.0 bits (70), Expect(3) = 5e-035
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 573 NNRPNSFKVLSPPRTCVAY 517
+NRP+SF V +P RTCV Y
Sbjct: 212 DNRPHSFSVYTPSRTCVVY 156
Score = 28.1 bits (55), Expect(3) = 5e-035
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 699 PGKYRVALDSDA 664
PGKY+V LDSDA
Sbjct: 314 PGKYKVVLDSDA 279
>gb|AV921312.1|AV921312 AV921312 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23a09 3', mRNA sequence
Length = 692
Score = 145 bits (312), Expect = 9e-034
Identities = 57/95 (60%), Positives = 73/95 (76%)
Frame = -2 / -3
Query: 951 SYDKCRRQWSLVDTDHLRYKYMNAFDQAMNALDERFSFLSSSKQIVSDMNDEEKVIVFER 772
SYDKCRR++ L D D LRY+ M FDQAM L+E++ F++S Q VS ++E+KVI+FER
Sbjct: 690 SYDKCRRRFDLXDADFLRYRGMQEFDQAMQHLEEKYGFMTSEHQYVSRKHEEDKVIIFER 511
Query: 771 GDLVFVFNFHPKKTYEGYKVGCDLPGKYRVALDSD 667
GDLVFVFNFH ++ Y+VGC PGKY+VALDSD
Sbjct: 510 GDLVFVFNFHWSNSFFDYRVGCSKPGKYKVALDSD 406
Score = 107 bits (228), Expect = 3e-022
Identities = 59/113 (52%), Positives = 68/113 (60%)
Frame = +2 / +2
Query: 614 VK*STSWPTLPCPPKTRASESRATLYFPGKSHPTL*PS*VFLGWKLKTKTKSPRSKTITF 793
VK*STS +L PPK+ +SES+ATLYFPG HPT * + L WKLKT TKSP SK IT
Sbjct: 353 VK*STS*SSLLNPPKSASSESKATLYFPGLEHPTR*SKKLLLQWKLKTNTKSPLSKMITL 532
Query: 794 SSSFMSLTICFDDERKENLSSSAFIAWSNAFMYLYRK*SVSTRLHCRLHLS*L 952
SSS T D SS IA SN+ + Y + S S R + R HLS*L
Sbjct: 533 SSSCFRETYWCSDVINPYFSSRCCIA*SNSCIPRYLRKSASXRSNLRRHLS*L 691
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,417,296,805
Number of Sequences: 312970
Number of extensions: 24499178
Number of successful extensions: 142449
Number of sequences better than 1.0e-020: 75
length of database: 58,378,179
effective HSP length: 55
effective length of database: 41,164,829
effective search space used: 36266214349
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)