TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3922840.2.1
(683 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA650691.1|AA650691 30805 Lambda-PRL2 Arabidopsis thalia... 123 6e-027
gb|U11766.1|ATU11766 Arabidopsis thaliana clone YAP317 GAST... 123 6e-027
gb|AV536951.1|AV536951 AV536951 Arabidopsis thaliana liquid... 122 8e-027
gb|CK117628.1|CK117628 215b02.p1 AtM1 Arabidopsis thaliana ... 122 8e-027
gb|CB252972.1|CB252972 13-E010740-019-001-I14-T7R MPIZ-ADIS... 122 8e-027
gb|CB254056.1|CB254056 81-E010699-019-002-B22-T7R MPIZ-ADIS... 122 8e-027
gb|CB254602.1|CB254602 64-E012999-019-004-P15-T7R MPIZ-ADIS... 122 8e-027
gb|AF462801.1|AF462801 Arabidopsis thaliana At1g75750/F10A5... 122 8e-027
emb|AX449292.1| Sequence 11 from Patent WO0185946 122 8e-027
emb|AX449325.1| Sequence 44 from Patent WO0185946 122 8e-027
emb|BX815202.1|CNS0ACY0 Arabidopsis thaliana Full-length cD... 122 8e-027
ref|NM_106225.2| Arabidopsis thaliana GASA1 AT1G75750 (GASA... 122 8e-027
gb|AV832285.1|AV832285 AV832285 RAFL11 Arabidopsis thaliana... 122 1e-026
gb|AV537065.1|AV537065 AV537065 Arabidopsis thaliana liquid... 122 1e-026
gb|U11765.1|ATU11765 Arabidopsis thaliana clone PAP296 GAST... 122 1e-026
gb|AY136306.1| Arabidopsis thaliana expressed protein (At1g... 122 1e-026
gb|BT000399.1| Arabidopsis thaliana expressed protein (At1g... 122 1e-026
ref|NM_117029.2| Arabidopsis thaliana GASA2 AT4G09610 (GASA... 122 1e-026
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 122 2e-026
emb|CQ768526.1| Sequence 21 from Patent WO2004007712 122 2e-026
emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosom... 122 2e-026
emb|AL161831.1|ATT25P22 Arabidopsis thaliana DNA chromosome... 122 2e-026
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 122 2e-026
gb|AY088756.1| Arabidopsis thaliana clone 9435 mRNA, comple... 119 8e-026
gb|AV786912.1|AV786912 AV786912 RAFL6 Arabidopsis thaliana ... 118 1e-025
gb|BP561269.1|BP561269 BP561269 RAFL6 Arabidopsis thaliana ... 118 1e-025
gb|CB254637.1|CB254637 64-E012994-019-004-P15-SP6r MPIZ-ADI... 118 1e-025
gb|U11764.1|ATU11764 Arabidopsis thaliana clone PAP322 GAST... 118 1e-025
gb|AY052302.1| Arabidopsis thaliana AT4g09600/T25P22_40 mRN... 118 1e-025
emb|BX829024.1|CNS0A3DX Arabidopsis thaliana Full-length cD... 118 1e-025
ref|NM_117028.2| Arabidopsis thaliana GASA3 AT4G09600 (GASA... 118 1e-025
gb|CC457827.1|CC457827 SALK_112562.52.50.x Arabidopsis thal... 118 2e-025
gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D... 118 2e-025
emb|CQ768516.1| Sequence 11 from Patent WO2004007712 118 2e-025
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 118 2e-025
gb|CB253992.1|CB253992 81-E018360-019-007-A21-T7R MPIZ-ADIS... 117 4e-025
gb|AV787442.1|AV787442 AV787442 RAFL6 Arabidopsis thaliana ... 116 5e-025
emb|CQ768524.1| Sequence 19 from Patent WO2004007712 116 5e-025
emb|AJ835181.1| Arabidopsis thaliana T-DNA flanking sequenc... 116 5e-025
emb|AJ835182.1| Arabidopsis thaliana T-DNA flanking sequenc... 116 5e-025
gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis tha... 116 7e-025
emb|CQ768512.1| Sequence 7 from Patent WO2004007712 116 7e-025
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 116 7e-025
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 116 7e-025
gb|BP574334.1|BP574334 BP574334 RAFL14 Arabidopsis thaliana... 115 2e-024
gb|CB253863.1|CB253863 86-E015392-019-006-K22-T7R MPIZ-ADIS... 115 2e-024
gb|AV566951.1|AV566951 AV566951 Arabidopsis thaliana green ... 114 3e-024
gb|BP606720.1|BP606720 BP606720 RAFL16 Arabidopsis thaliana... 114 3e-024
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 114 3e-024
gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC ... 114 3e-024
emb|CQ768508.1| Sequence 3 from Patent WO2004007712 114 3e-024
gb|BP835942.1|BP835942 BP835942 RAFL19 Arabidopsis thaliana... 114 3e-024
emb|BX813832.1|CNS0ADT0 Arabidopsis thaliana Full-length cD... 113 7e-024
gb|AU239657.1|AU239657 AU239657 RAFL21 Arabidopsis thaliana... 112 1e-023
gb|BP665704.1|BP665704 BP665704 RAFL21 Arabidopsis thaliana... 112 1e-023
dbj|AK118784.1| Arabidopsis thaliana At1g22690 mRNA for put... 112 1e-023
ref|NM_102116.2| Arabidopsis thaliana unknown protein AT1G2... 112 1e-023
gb|AW004555.1|AW004555 701932277 A. thaliana, mixed source ... 110 4e-023
gb|BP586941.1|BP586941 BP586941 RAFL15 Arabidopsis thaliana... 75 8e-022
gb|BP827354.1|BP827354 BP827354 RAFL19 Arabidopsis thaliana... 90 8e-022
gb|BP868995.1|BP868995 BP868995 RAFL21 Arabidopsis thaliana... 106 8e-022
gb|BP840469.1|BP840469 BP840469 RAFL19 Arabidopsis thaliana... 105 1e-021
gb|AV536469.1|AV536469 AV536469 Arabidopsis thaliana liquid... 104 3e-021
emb|AL764200.1| Arabidopsis thaliana T-DNA flanking sequenc... 104 4e-021
gb|AC004218.3| Arabidopsis thaliana chromosome 2 clone F12L... 103 7e-021
emb|CQ768520.1| Sequence 15 from Patent WO2004007712 103 7e-021
gb|BP839701.1|BP839701 BP839701 RAFL19 Arabidopsis thaliana... 88 9e-021
>gb|AA650691.1|AA650691 30805 Lambda-PRL2 Arabidopsis thaliana cDNA clone 278F8T7, mRNA
sequence
Length = 593
Score = 123 bits (263), Expect = 6e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 136 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNXDKCQCY 315
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 316 ASLTTHGGRRKCP* 357
>gb|U11766.1|ATU11766 Arabidopsis thaliana clone YAP317 GAST1 protein homolog mRNA,
complete cds
Length = 590
Score = 123 bits (263), Expect = 6e-027
Identities = 43/74 (58%), Positives = 54/74 (72%)
Frame = -1 / +2
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E++ +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 113 ESSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 292
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 293 ASLTTHGGRRKCP* 334
>gb|AV536951.1|AV536951 AV536951 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0730R 5', mRNA
sequence
Length = 477
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +3
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 126 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 305
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 306 ASLTTHGGRRKCP* 347
>gb|CK117628.1|CK117628 215b02.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B02215
5-PRIME, mRNA sequence
Length = 500
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 133 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 312
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 313 ASLTTHGGRRKCP* 354
>gb|CB252972.1|CB252972 13-E010740-019-001-I14-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768I141Q 5-PRIME, mRNA sequence
Length = 394
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +3
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 165 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 344
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 345 ASLTTHGGRRKCP* 386
>gb|CB254056.1|CB254056 81-E010699-019-002-B22-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768B222Q 5-PRIME, mRNA sequence
Length = 624
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 134 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 313
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 314 ASLTTHGGRRKCP* 355
>gb|CB254602.1|CB254602 64-E012999-019-004-P15-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768P154Q 5-PRIME, mRNA sequence
Length = 606
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +3
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 135 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 314
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 315 ASLTTHGGRRKCP* 356
>gb|AF462801.1|AF462801 Arabidopsis thaliana At1g75750/F10A5_16 mRNA, complete cds
Length = 635
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 148 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 327
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 328 ASLTTHGGRRKCP* 369
>emb|AX449292.1| Sequence 11 from Patent WO0185946
Length = 643
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 137 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 316
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 317 ASLTTHGGRRKCP* 358
>emb|AX449325.1| Sequence 44 from Patent WO0185946
Length = 653
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +3
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 147 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 326
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 327 ASLTTHGGRRKCP* 368
>emb|BX815202.1|CNS0ACY0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS41ZC11 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 612
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 137 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 316
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 317 ASLTTHGGRRKCP* 358
>ref|NM_106225.2| Arabidopsis thaliana GASA1 AT1G75750 (GASA1) mRNA, complete cds
Length = 647
Score = 122 bits (262), Expect = 8e-027
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 154 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 333
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 334 ASLTTHGGRRKCP* 375
>gb|AV832285.1|AV832285 AV832285 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-10-B10 5',
mRNA sequence
Length = 477
Score = 122 bits (261), Expect = 1e-026
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = -1 / +3
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG+ C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 153 ENSQKKNGYAKKIDCGSGCVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 332
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 333 ASLTTHGGRRKCP* 374
>gb|AV537065.1|AV537065 AV537065 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0858R 5', mRNA
sequence
Length = 334
Score = 122 bits (261), Expect = 1e-026
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 115 ENSQKKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 294
Query: 320 ANMKTHDGQHKCP 282
A++ TH G+ KCP
Sbjct: 295 ASLTTHGGRRKCP 333
>gb|U11765.1|ATU11765 Arabidopsis thaliana clone PAP296 GAST1 protein homolog mRNA,
complete cds
Length = 510
Score = 122 bits (261), Expect = 1e-026
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = -1 / +2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 167 IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 346
Query: 284 P*S 276
P*+
Sbjct: 347 P*N 355
>gb|AY136306.1| Arabidopsis thaliana expressed protein (At1g75750) mRNA, complete
cds
Length = 626
Score = 122 bits (261), Expect = 1e-026
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = -1 / +2
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG+ C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 152 ENSQKKNGYAKKIDCGSGCVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 331
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 332 ASLTTHGGRRKCP* 373
>gb|BT000399.1| Arabidopsis thaliana expressed protein (At1g75750) mRNA, complete
cds
Length = 379
Score = 122 bits (261), Expect = 1e-026
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG+ C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 76 ENSQKKNGYAKKIDCGSGCVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 255
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 256 ASLTTHGGRRKCP* 297
>ref|NM_117029.2| Arabidopsis thaliana GASA2 AT4G09610 (GASA2) mRNA, complete cds
Length = 529
Score = 122 bits (261), Expect = 1e-026
Identities = 42/63 (66%), Positives = 49/63 (77%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 187 IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 366
Query: 284 P*S 276
P*+
Sbjct: 367 P*N 375
>emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long arm
Length = 14497843
Score = 122 bits (260), Expect = 2e-026
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 1987828 VDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 1987649
Query: 284 P*S 276
P*+
Sbjct: 1987648 P*N 1987640
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -3
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 1985912 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 1985733
Query: 281 *S 276
*+
Sbjct: 1985732 *T 1985727
>emb|CQ768526.1| Sequence 21 from Patent WO2004007712
Length = 1647
Score = 122 bits (260), Expect = 2e-026
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / +2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 962 VDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 1141
Query: 284 P*S 276
P*+
Sbjct: 1142 P*N 1150
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27
Length = 197394
Score = 122 bits (260), Expect = 2e-026
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 92729 VDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 92550
Query: 284 P*S 276
P*+
Sbjct: 92549 P*N 92541
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -1
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 90813 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 90634
Query: 281 *S 276
*+
Sbjct: 90633 *T 90628
>emb|AL161831.1|ATT25P22 Arabidopsis thaliana DNA chromosome 4, BAC clone T25P22 (ESSA project)
Length = 97876
Score = 122 bits (260), Expect = 2e-026
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 45571 VDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 45392
Query: 284 P*S 276
P*+
Sbjct: 45391 P*N 45383
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -3
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 43655 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 43476
Query: 281 *S 276
*+
Sbjct: 43475 *T 43470
>ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complete sequence
Length = 18585042
Score = 122 bits (260), Expect = 2e-026
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = -1 / -3
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DCG C RCSKS R K+CLRAC +CC RC CVPPGTSGN +CPCYA++ TH G+ KC
Sbjct: 6075109 VDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 6074930
Query: 284 P*S 276
P*+
Sbjct: 6074929 P*N 6074921
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 6073193 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 6073014
Query: 281 *S 276
*+
Sbjct: 6073013 *T 6073008
>gb|AY088756.1| Arabidopsis thaliana clone 9435 mRNA, complete sequence
Length = 631
Score = 119 bits (255), Expect = 8e-026
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDC ++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 154 ENSQKKNGYAKKIDCXSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 333
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 334 ASLTTHGGRRKCP* 375
>gb|AV786912.1|AV786912 AV786912 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-F10 3',
mRNA sequence
Length = 397
Score = 118 bits (253), Expect = 1e-025
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1 / -2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KC
Sbjct: 393 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 214
Query: 284 P*S 276
P*+
Sbjct: 213 P*T 205
>gb|BP561269.1|BP561269 BP561269 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-73-F10 5',
mRNA sequence
Length = 590
Score = 118 bits (253), Expect = 1e-025
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KC
Sbjct: 196 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 375
Query: 284 P*S 276
P*+
Sbjct: 376 P*T 384
>gb|CB254637.1|CB254637 64-E012994-019-004-P15-SP6r MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768P154Q 3-PRIME, mRNA sequence
Length = 581
Score = 118 bits (253), Expect = 1e-025
Identities = 42/74 (56%), Positives = 51/74 (68%)
Frame = -1 / -3
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ I CG++C RC S RP++C RACGTCC RC CVPPGT GN D C CY
Sbjct: 528 ENSQKKNGYAKKIHCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCY 349
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G KCP*
Sbjct: 348 ASLTTHGGPRKCP* 307
>gb|U11764.1|ATU11764 Arabidopsis thaliana clone PAP322 GAST1 protein homolog mRNA,
complete cds
Length = 542
Score = 118 bits (253), Expect = 1e-025
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KC
Sbjct: 148 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 327
Query: 284 P*S 276
P*+
Sbjct: 328 P*T 336
>gb|AY052302.1| Arabidopsis thaliana AT4g09600/T25P22_40 mRNA, complete cds
Length = 588
Score = 118 bits (253), Expect = 1e-025
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1 / +2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KC
Sbjct: 194 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 373
Query: 284 P*S 276
P*+
Sbjct: 374 P*T 382
>emb|BX829024.1|CNS0A3DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL60ZE07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 623
Score = 118 bits (253), Expect = 1e-025
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KC
Sbjct: 211 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 390
Query: 284 P*S 276
P*+
Sbjct: 391 P*T 399
>ref|NM_117028.2| Arabidopsis thaliana GASA3 AT4G09600 (GASA3) mRNA, complete cds
Length = 605
Score = 118 bits (253), Expect = 1e-025
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KC
Sbjct: 211 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 390
Query: 284 P*S 276
P*+
Sbjct: 391 P*T 399
>gb|CC457827.1|CC457827 SALK_112562.52.50.x Arabidopsis thaliana TDNA insertion lines
Arabidopsis thaliana genomic clone SALK_112562.52.50.x,
DNA sequence
Length = 448
Score = 118 bits (252), Expect = 2e-025
Identities = 40/66 (60%), Positives = 47/66 (71%)
Frame = -1 / +3
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DC + C RCS S RP +C RACGTCC RC CV PGTSGN D CPCY ++ TH G+ KC
Sbjct: 195 VDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKC 374
Query: 284 P*SIHR 267
P* + R
Sbjct: 375 P*KLCR 392
>gb|AC006439.4| Arabidopsis thaliana chromosome 2 clone T30D6 map mi39, complete
sequence
Length = 92861
Score = 118 bits (252), Expect = 2e-025
Identities = 40/66 (60%), Positives = 47/66 (71%)
Frame = -1 / -2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DC + C RCS S RP +C RACGTCC RC CV PGTSGN D CPCY ++ TH G+ KC
Sbjct: 21316 VDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKC 21137
Query: 284 P*SIHR 267
P* + R
Sbjct: 21136 P*KLCR 21119
>emb|CQ768516.1| Sequence 11 from Patent WO2004007712
Length = 1782
Score = 118 bits (252), Expect = 2e-025
Identities = 40/66 (60%), Positives = 47/66 (71%)
Frame = -1 / +3
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DC + C RCS S RP +C RACGTCC RC CV PGTSGN D CPCY ++ TH G+ KC
Sbjct: 789 VDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKC 968
Query: 284 P*SIHR 267
P* + R
Sbjct: 969 P*KLCR 986
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 118 bits (252), Expect = 2e-025
Identities = 40/66 (60%), Positives = 47/66 (71%)
Frame = -1 / +3
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
+DC + C RCS S RP +C RACGTCC RC CV PGTSGN D CPCY ++ TH G+ KC
Sbjct: 8001231 VDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKC 8001410
Query: 284 P*SIHR 267
P* + R
Sbjct: 8001411 P*KLCR 8001428
Score = 103 bits (219), Expect = 7e-021
Identities = 35/72 (48%), Positives = 45/72 (62%)
Frame = -1 / +1
Query: 470 EAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQH 291
E CG C+ RCSK+G+ + CL+ C CCQ+C CVP GT G++D CPCY +MK G
Sbjct: 16508128 ELAACGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGS 16508307
Query: 290 KCP*SIHRGSQH 255
KCP*+ H
Sbjct: 16508308 KCP*TFFEDPHH 16508343
>gb|CB253992.1|CB253992 81-E018360-019-007-A21-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768A217Q 5-PRIME, mRNA sequence
Length = 452
Score = 117 bits (250), Expect = 4e-025
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S RP++C R+CGTCC RC CVPPGT GN D C CY
Sbjct: 124 ENSQKKNGYAKNIDCGSACVARCMLSRRPRLCHRSCGTCCYRCNCVPPGTYGNYD*CQCY 303
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ CP*
Sbjct: 304 ASLTTHGGRRMCP* 345
>gb|AV787442.1|AV787442 AV787442 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-75-J21 3',
mRNA sequence
Length = 417
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -3
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 415 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 236
Query: 281 *S 276
*+
Sbjct: 235 *T 230
>emb|CQ768524.1| Sequence 19 from Patent WO2004007712
Length = 1500
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / +2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 821 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 1000
Query: 281 *S 276
*+
Sbjct: 1001 *T 1006
>emb|AJ835181.1| Arabidopsis thaliana T-DNA flanking sequence, right border, clone
100B04
Length = 369
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 308 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 129
Query: 281 *S 276
*+
Sbjct: 128 *T 123
>emb|AJ835182.1| Arabidopsis thaliana T-DNA flanking sequence, right border, clone
100D10
Length = 371
Score = 116 bits (249), Expect = 5e-025
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -3
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG C RCSKS RP +CLRAC +CC RC CVPPGT+GN +CPCYA++ T G+ KCP
Sbjct: 309 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 130
Query: 281 *S 276
*+
Sbjct: 129 *T 124
>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence
Length = 129547
Score = 116 bits (248), Expect = 7e-025
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CYA++ TH G+ KC
Sbjct: 17317 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKC 17496
Query: 284 P* 279
P*
Sbjct: 17497 P* 17502
>emb|CQ768512.1| Sequence 7 from Patent WO2004007712
Length = 1472
Score = 116 bits (248), Expect = 7e-025
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CYA++ TH G+ KC
Sbjct: 787 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKC 966
Query: 284 P* 279
P*
Sbjct: 967 P* 972
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 116 bits (248), Expect = 7e-025
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = -1 / -2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CYA++ TH G+ KC
Sbjct: 12683317 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKC 12683138
Query: 284 P* 279
P*
Sbjct: 12683137 P* 12683132
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 116 bits (248), Expect = 7e-025
Identities = 40/62 (64%), Positives = 47/62 (75%)
Frame = -1 / -2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CYA++ TH G+ KC
Sbjct: 28445659 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKC 28445480
Query: 284 P* 279
P*
Sbjct: 28445479 P* 28445474
Score = 114 bits (244), Expect = 3e-024
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = -1 / +2
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG +C+ RCSK+ R K+C RACG+CC +C CVPPGTSGN CPCYA+++TH + KC
Sbjct: 8027765 IDCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 8027944
Query: 284 P* 279
P*
Sbjct: 8027945 P* 8027950
>gb|BP574334.1|BP574334 BP574334 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-87-J23 3',
mRNA sequence
Length = 365
Score = 115 bits (245), Expect = 2e-024
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = -1 / -1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG++C RC S RP++C RACGTCC RC C+PPGT GN D C CYA++ TH G+ KC
Sbjct: 362 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCLPPGTYGNYDKCQCYASLTTHGGRRKC 183
Query: 284 P* 279
P*
Sbjct: 182 P* 177
>gb|CB253863.1|CB253863 86-E015392-019-006-K22-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768K226Q 5-PRIME, mRNA sequence
Length = 624
Score = 115 bits (245), Expect = 2e-024
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = -1 / +1
Query: 500 ETTTSPHGQAEAIDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCY 321
E + +G A+ IDCG++C RC S R ++C RACGTCC RC CVP GT GN D C CY
Sbjct: 130 ENSQKKNGYAKKIDCGSACVARCRLSRRARLCHRACGTCCYRCNCVPXGTYGNYDKCQCY 309
Query: 320 ANMKTHDGQHKCP* 279
A++ TH G+ KCP*
Sbjct: 310 ASLTTHGGRRKCP* 351
>gb|AV566951.1|AV566951 AV566951 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQL03g03F 3', mRNA sequence
Length = 456
Score = 114 bits (244), Expect = 3e-024
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = -1 / -2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CYA++ TH G+ KCP
Sbjct: 455 DCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 276
Query: 281 * 279
*
Sbjct: 275 * 273
>gb|BP606720.1|BP606720 BP606720 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-71-P13 3',
mRNA sequence
Length = 436
Score = 114 bits (244), Expect = 3e-024
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = -1 / -2
Query: 461 DCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKCP 282
DCG++C RC S RP++C RACGTCC RC CVPPGT GN D C CYA++ TH G+ KCP
Sbjct: 435 DCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 256
Query: 281 * 279
*
Sbjct: 255 * 253
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 114 bits (244), Expect = 3e-024
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = -1 / +1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG +C+ RCSK+ R K+C RACG+CC +C CVPPGTSGN CPCYA+++TH + KC
Sbjct: 8027530 IDCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 8027709
Query: 284 P* 279
P*
Sbjct: 8027710 P* 8027715
>gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC T22J18 sequence, complete
sequence
Length = 84162
Score = 114 bits (244), Expect = 3e-024
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = -1 / -1
Query: 464 IDCGASCSYRCSKSGRPKMCLRACGTCCQRCGCVPPGTSGNEDVCPCYANMKTHDGQHKC 285
IDCG +C+ RCSK+ R K+C RACG+CC +C CVPPGTSGN CPCYA+++TH + KC
Sbjct: 51516 IDCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 51337
Query: 284 P* 279
P*
Sbjct: 51336 P* 51331
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,151,200,074
Number of Sequences: 1013581
Number of extensions: 13754786
Number of successful extensions: 129098
Number of sequences better than 1.0e-020: 80
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 42524133620
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)