TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594342.2.1
(715 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV524052.1|AV524052 AV524052 Arabidopsis thaliana aboveg... 139 7e-032
gb|AY080756.1| Arabidopsis thaliana At5g64570 mRNA sequence 139 7e-032
gb|BE037990.1|BE037990 AA07D06 AA Arabidopsis thaliana cDNA... 138 1e-031
gb|AV792219.1|AV792219 AV792219 RAFL7 Arabidopsis thaliana ... 138 1e-031
gb|AV793356.1|AV793356 AV793356 RAFL8 Arabidopsis thaliana ... 138 1e-031
gb|AV802806.1|AV802806 AV802806 RAFL9 Arabidopsis thaliana ... 138 1e-031
gb|AV815385.1|AV815385 AV815385 RAFL9 Arabidopsis thaliana ... 138 1e-031
gb|AV816603.1|AV816603 AV816603 RAFL9 Arabidopsis thaliana ... 138 1e-031
gb|CB259970.1|CB259970 10-E9537-013-002-C04-T7R MPIZ-ADIS-0... 138 1e-031
gb|BP607362.1|BP607362 BP607362 RAFL16 Arabidopsis thaliana... 138 1e-031
gb|BP612193.1|BP612193 BP612193 RAFL16 Arabidopsis thaliana... 138 1e-031
gb|BP781731.1|BP781731 BP781731 RAFL7 Arabidopsis thaliana ... 138 1e-031
gb|BP788304.1|BP788304 BP788304 RAFL7 Arabidopsis thaliana ... 138 1e-031
gb|BP795120.1|BP795120 BP795120 RAFL7 Arabidopsis thaliana ... 138 1e-031
dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosom... 138 1e-031
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 138 1e-031
dbj|AK221967.1| Arabidopsis thaliana mRNA for beta-xylosida... 138 1e-031
ref|NM_125853.2| Arabidopsis thaliana XYL4; hydrolase, hydr... 138 1e-031
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 138 1e-031
emb|CQ805050.1| Sequence 1461 from Patent WO2004035798 138 2e-031
gb|BP600043.1|BP600043 BP600043 RAFL16 Arabidopsis thaliana... 137 3e-031
gb|BP605774.1|BP605774 BP605774 RAFL16 Arabidopsis thaliana... 137 3e-031
gb|BP788821.1|BP788821 BP788821 RAFL7 Arabidopsis thaliana ... 137 3e-031
gb|BP782220.1|BP782220 BP782220 RAFL7 Arabidopsis thaliana ... 137 5e-031
dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosom... 137 5e-031
emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome... 137 5e-031
ref|NM_121007.1| Arabidopsis thaliana hydrolase, hydrolyzin... 137 5e-031
gb|BP620432.1|BP620432 BP620432 RAFL16 Arabidopsis thaliana... 136 6e-031
gb|CW844506.1|CW844506 GT11068.Ds3.07.24.2002.jw47.591 Arab... 135 2e-030
gb|CW844507.1|CW844507 GT11068.Ds3.11.04.2002.jw57.588 Arab... 135 2e-030
gb|BP644813.1|BP644813 BP644813 RAFL19 Arabidopsis thaliana... 134 3e-030
gb|BP575635.1|BP575635 BP575635 RAFL14 Arabidopsis thaliana... 133 4e-030
gb|AV797904.1|AV797904 AV797904 RAFL9 Arabidopsis thaliana ... 133 8e-030
gb|CK121019.1|CK121019 205b06.p1 AtM1 Arabidopsis thaliana ... 133 8e-030
gb|AY053409.1| Arabidopsis thaliana AT5g09730/F17I14_80 mRN... 133 8e-030
dbj|AK221979.1| Arabidopsis thaliana mRNA for beta-xylosida... 133 8e-030
ref|NM_121010.2| Arabidopsis thaliana BXL3 (BETA-XYLOSIDASE... 133 8e-030
gb|AV564166.1|AV564166 AV564166 Arabidopsis thaliana green ... 132 2e-029
gb|AV795382.1|AV795382 AV795382 RAFL8 Arabidopsis thaliana ... 130 5e-029
gb|BP621395.1|BP621395 BP621395 RAFL16 Arabidopsis thaliana... 130 5e-029
gb|CW842043.1|CW842043 ET11895.Ds3.04.14.2003.jw95.571 Arab... 129 1e-028
gb|BP621418.1|BP621418 BP621418 RAFL16 Arabidopsis thaliana... 128 1e-028
gb|BP601062.1|BP601062 BP601062 RAFL16 Arabidopsis thaliana... 128 2e-028
gb|BP598892.1|BP598892 BP598892 RAFL16 Arabidopsis thaliana... 83 3e-028
gb|BP617500.1|BP617500 BP617500 RAFL16 Arabidopsis thaliana... 100 8e-028
gb|BP607602.1|BP607602 BP607602 RAFL16 Arabidopsis thaliana... 126 9e-028
gb|BP616696.1|BP616696 BP616696 RAFL16 Arabidopsis thaliana... 76 7e-027
gb|AI993943.1|AI993943 701494050 A. thaliana, Ohio State cl... 122 9e-027
gb|BP603244.1|BP603244 BP603244 RAFL16 Arabidopsis thaliana... 72 1e-026
gb|BP641248.1|BP641248 BP641248 RAFL19 Arabidopsis thaliana... 120 4e-026
gb|AV800718.1|AV800718 AV800718 RAFL9 Arabidopsis thaliana ... 78 7e-026
gb|BP645785.1|BP645785 BP645785 RAFL19 Arabidopsis thaliana... 93 2e-025
gb|BP603081.1|BP603081 BP603081 RAFL16 Arabidopsis thaliana... 84 6e-025
gb|BP594198.1|BP594198 BP594198 RAFL15 Arabidopsis thaliana... 113 7e-024
gb|BP657584.1|BP657584 BP657584 RAFL19 Arabidopsis thaliana... 82 1e-022
gb|BP617267.1|BP617267 BP617267 RAFL16 Arabidopsis thaliana... 106 8e-022
emb|BX830979.1|CNS0A0SC Arabidopsis thaliana Full-length cD... 106 8e-022
gb|BP666134.1|BP666134 BP666134 RAFL21 Arabidopsis thaliana... 88 1e-021
gb|N96324.1|N96324 21924 Lambda-PRL1 Arabidopsis thaliana c... 105 2e-021
gb|BP780196.1|BP780196 BP780196 RAFL7 Arabidopsis thaliana ... 88 5e-021
>gb|AV524052.1|AV524052 AV524052 Arabidopsis thaliana aboveground organs two to six-week
old Arabidopsis thaliana cDNA clone APZL50c08F 3', mRNA
sequence
Length = 582
Score = 139 bits (299), Expect = 7e-032
Identities = 57/98 (58%), Positives = 74/98 (75%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 296 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 117
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDELG RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 116 ICKDLSVVDELGKRKIGLGKHLLHVGDLKHSLSIRI*F 3
>gb|AY080756.1| Arabidopsis thaliana At5g64570 mRNA sequence
Length = 2488
Score = 139 bits (299), Expect = 7e-032
Identities = 56/98 (57%), Positives = 75/98 (76%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV+FKV+
Sbjct: 2089 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVSFKVE 2268
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 2269 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 2382
>gb|BE037990.1|BE037990 AA07D06 AA Arabidopsis thaliana cDNA 5' similar to
beta-glucosidase, mRNA sequence
Length = 701
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 456 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 277
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 276 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 163
>gb|AV792219.1|AV792219 AV792219 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-14-A07 3',
mRNA sequence
Length = 437
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 389 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 210
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 209 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 96
>gb|AV793356.1|AV793356 AV793356 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-08-C21 3',
mRNA sequence
Length = 440
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 401 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 222
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 221 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 108
>gb|AV802806.1|AV802806 AV802806 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-33-E16 3',
mRNA sequence
Length = 441
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 385 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 206
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 205 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 92
>gb|AV815385.1|AV815385 AV815385 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-86-I05 3',
mRNA sequence
Length = 408
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 385 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 206
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 205 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 92
>gb|AV816603.1|AV816603 AV816603 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-91-E10 3',
mRNA sequence
Length = 401
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 342 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 163
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 162 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 49
>gb|CB259970.1|CB259970 10-E9537-013-002-C04-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA
clone MPIZp770C042Q 5-PRIME, mRNA sequence
Length = 634
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / +3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 300 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 479
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 480 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 593
>gb|BP607362.1|BP607362 BP607362 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-74-I22 3',
mRNA sequence
Length = 412
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 385 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 206
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 205 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 92
>gb|BP612193.1|BP612193 BP612193 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-88-J07 3',
mRNA sequence
Length = 427
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 365 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 186
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 185 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 72
>gb|BP781731.1|BP781731 BP781731 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-79-E21 3',
mRNA sequence
Length = 395
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 385 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 206
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 205 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 92
>gb|BP788304.1|BP788304 BP788304 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-33-E06 3',
mRNA sequence
Length = 419
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 384 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 205
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 204 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 91
>gb|BP795120.1|BP795120 BP795120 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-63-J19 3',
mRNA sequence
Length = 399
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 385 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 206
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 205 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 92
>dbj|AB010076.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUB3
Length = 82188
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 29685 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 29506
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 29505 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 29392
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 22845830 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 22845651
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 22845650 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 22845537
Score = 137 bits (293), Expect = 5e-031
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = -2 / +2
Query: 708 ALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVA 529
A+ E F V L+VRN G R G TVFLF++PP V +P K LLGFEK+ L + VV
Sbjct: 2820014 AVGERSDFEVQLKVRNVGDREGTETVFLFTTPPEVHGSPRKQLLGFEKIRLGKKEETVVR 2820193
Query: 528 FKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
FKVDVCKDL VVDE+G RK+ALG H LHVG LKH+ N+ V*
Sbjct: 2820194 FKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNISV* 2820316
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 2808427 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 2808606
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 2808607 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 2808720
>dbj|AK221967.1| Arabidopsis thaliana mRNA for beta-xylosidase, partial cds, clone:
RAFL22-56-H01
Length = 1656
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 1282 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 1461
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 1462 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 1575
>ref|NM_125853.2| Arabidopsis thaliana XYL4; hydrolase, hydrolyzing O-glycosyl
compounds AT5G64570 (XYL4) mRNA, complete cds
Length = 2493
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / +3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 2091 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 2270
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 2271 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 2384
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 138 bits (297), Expect = 1e-031
Identities = 56/98 (57%), Positives = 74/98 (75%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 25827743 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 25827564
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 25827563 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 25827450
Score = 137 bits (293), Expect = 5e-031
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = -2 / -1
Query: 708 ALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVA 529
A+ E F V L+VRN G R G TVFLF++PP V +P K LLGFEK+ L + VV
Sbjct: 3004023 AVGERSDFEVQLKVRNVGDREGTETVFLFTTPPEVHGSPRKQLLGFEKIRLGKKEETVVR 3003844
Query: 528 FKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
FKVDVCKDL VVDE+G RK+ALG H LHVG LKH+ N+ V*
Sbjct: 3003843 FKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNISV* 3003721
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 3015610 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 3015431
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 3015430 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 3015317
>emb|CQ805050.1| Sequence 1461 from Patent WO2004035798
Length = 2355
Score = 138 bits (296), Expect = 2e-031
Identities = 56/97 (57%), Positives = 73/97 (75%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 2065 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 2244
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*
Sbjct: 2245 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI* 2355
>gb|BP600043.1|BP600043 BP600043 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-44-H06 3',
mRNA sequence
Length = 428
Score = 137 bits (294), Expect = 3e-031
Identities = 55/98 (56%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G T+FLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 389 GSAFEVHIKVRNGGDREGIHTLFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 210
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 209 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 96
>gb|BP605774.1|BP605774 BP605774 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-68-D19 3',
mRNA sequence
Length = 408
Score = 137 bits (294), Expect = 3e-031
Identities = 55/98 (56%), Positives = 74/98 (75%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FK++
Sbjct: 336 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKLE 157
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 156 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 43
>gb|BP788821.1|BP788821 BP788821 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-35-K15 3',
mRNA sequence
Length = 401
Score = 137 bits (294), Expect = 3e-031
Identities = 55/98 (56%), Positives = 74/98 (75%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 400 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 221
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G R++ LG H LHVGDLKH+L++ +*+
Sbjct: 220 ICKDLSVVDEIGKRRIGLGKHLLHVGDLKHSLSIRI*F 107
>gb|BP782220.1|BP782220 BP782220 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-81-G09 3',
mRNA sequence
Length = 386
Score = 137 bits (293), Expect = 5e-031
Identities = 55/96 (57%), Positives = 73/96 (76%)
Frame = -2 / -3
Query: 690 AFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVC 511
AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV++C
Sbjct: 384 AFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVEIC 205
Query: 510 KDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
KDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 204 KDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 97
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16
Length = 68098
Score = 137 bits (293), Expect = 5e-031
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = -2 / -2
Query: 708 ALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVA 529
A+ E F V L+VRN G R G TVFLF++PP V +P K LLGFEK+ L + VV
Sbjct: 24885 AVGERSDFEVQLKVRNVGDREGTETVFLFTTPPEVHGSPRKQLLGFEKIRLGKKEETVVR 24706
Query: 528 FKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
FKVDVCKDL VVDE+G RK+ALG H LHVG LKH+ N+ V*
Sbjct: 24705 FKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNISV* 24583
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / -1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 36472 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 36293
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 36292 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 36179
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project)
Length = 92491
Score = 137 bits (293), Expect = 5e-031
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = -2 / +2
Query: 708 ALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVA 529
A+ E F V L+VRN G R G TVFLF++PP V +P K LLGFEK+ L + VV
Sbjct: 44699 AVGERSDFEVQLKVRNVGDREGTETVFLFTTPPEVHGSPRKQLLGFEKIRLGKKEETVVR 44878
Query: 528 FKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
FKVDVCKDL VVDE+G RK+ALG H LHVG LKH+ N+ V*
Sbjct: 44879 FKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNISV* 45001
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 33112 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 33291
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 33292 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 33405
>ref|NM_121007.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds
AT5G09700 mRNA, complete cds
Length = 1236
Score = 137 bits (293), Expect = 5e-031
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = -2 / +1
Query: 708 ALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVA 529
A+ E F V L+VRN G R G TVFLF++PP V +P K LLGFEK+ L + VV
Sbjct: 934 AVGERSDFEVQLKVRNVGDREGTETVFLFTTPPEVHGSPRKQLLGFEKIRLGKKEETVVR 1113
Query: 528 FKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
FKVDVCKDL VVDE+G RK+ALG H LHVG LKH+ N+ V*
Sbjct: 1114 FKVDVCKDLGVVDEIGKRKLALGHHLLHVGSLKHSFNISV* 1236
>gb|BP620432.1|BP620432 BP620432 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-37-E11 3',
mRNA sequence
Length = 429
Score = 136 bits (292), Expect = 6e-031
Identities = 55/98 (56%), Positives = 74/98 (75%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + +V FKV+
Sbjct: 391 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEPLVRFKVE 212
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 211 ICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 98
>gb|CW844506.1|CW844506 GT11068.Ds3.07.24.2002.jw47.591 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT11068, DNA sequence
Length = 591
Score = 135 bits (289), Expect = 2e-030
Identities = 59/94 (62%), Positives = 69/94 (73%)
Frame = -2 / +3
Query: 687 FNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCK 508
F V L+VRN G R G TVFLF++PP V + K LLGFEK+ L + VV FKVDVCK
Sbjct: 114 FEV*LKVRNVGDREGTQTVFLFTTPPEVHGSQRKQLLGFEKIRLGKKEETVVRFKVDVCK 293
Query: 507 DLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
DLSVVDE+G RK+ALG H LHVG LKH+LN+ V*
Sbjct: 294 DLSVVDEIGKRKLALGHHLLHVGSLKHSLNISV* 395
>gb|CW844507.1|CW844507 GT11068.Ds3.11.04.2002.jw57.588 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
GT11068, DNA sequence
Length = 588
Score = 135 bits (289), Expect = 2e-030
Identities = 59/94 (62%), Positives = 69/94 (73%)
Frame = -2 / +2
Query: 687 FNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCK 508
F V L+VRN G R G TVFLF++PP V + K LLGFEK+ L + VV FKVDVCK
Sbjct: 116 FEV*LKVRNVGDREGTQTVFLFTTPPEVHGSQRKQLLGFEKIRLGKKEETVVRFKVDVCK 295
Query: 507 DLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV* 406
DLSVVDE+G RK+ALG H LHVG LKH+LN+ V*
Sbjct: 296 DLSVVDEIGKRKLALGHHLLHVGSLKHSLNISV* 397
>gb|BP644813.1|BP644813 BP644813 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-66-L10 3',
mRNA sequence
Length = 414
Score = 134 bits (287), Expect = 3e-030
Identities = 54/98 (55%), Positives = 73/98 (74%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PP + +P K L+GFEK+ L + +V FKV+
Sbjct: 365 GSAFEVHIKVRNGGDREGIHTVFLFTTPPPIHGSPRKHLVGFEKIRLGKREEPLVRFKVE 186
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDLSVVDE+G RK+ LG+H LHVGDLKH+L + +*+
Sbjct: 185 ICKDLSVVDEIGKRKIGLGNHLLHVGDLKHSLTIRI*F 72
>gb|BP575635.1|BP575635 BP575635 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-13-F13 3',
mRNA sequence
Length = 426
Score = 133 bits (286), Expect = 4e-030
Identities = 53/98 (54%), Positives = 73/98 (74%)
Frame = -2 / -3
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF +++RN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV+
Sbjct: 385 GSAFEFHIKLRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVE 206
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
+CKDL+VVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 205 ICKDLTVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 92
>gb|AV797904.1|AV797904 AV797904 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-14-E01 3',
mRNA sequence
Length = 391
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 351 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 172
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 171 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 58
>gb|CK121019.1|CK121019 205b06.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011B06205
5-PRIME, mRNA sequence
Length = 702
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / +2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 362 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 541
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 542 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 655
>gb|AY053409.1| Arabidopsis thaliana AT5g09730/F17I14_80 mRNA, complete cds
Length = 2418
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 2068 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 2247
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 2248 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 2361
>dbj|AK221979.1| Arabidopsis thaliana mRNA for beta-xylosidase - like protein,
partial cds, clone: RAFL22-58-K12
Length = 934
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 574 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 753
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 754 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 867
>ref|NM_121010.2| Arabidopsis thaliana BXL3 (BETA-XYLOSIDASE 3); hydrolase, hydrolyzing
O-glycosyl compounds AT5G09730 (BXL3) mRNA, complete cds
Length = 2430
Score = 133 bits (284), Expect = 8e-030
Identities = 57/98 (58%), Positives = 69/98 (70%)
Frame = -2 / +1
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+
Sbjct: 2068 GSDFEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVN 2247
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
VCKDLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 2248 VCKDLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 2361
>gb|AV564166.1|AV564166 AV564166 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ200a07F 3', mRNA sequence
Length = 361
Score = 132 bits (282), Expect = 2e-029
Identities = 56/95 (58%), Positives = 68/95 (71%)
Frame = -2 / -2
Query: 687 FNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCK 508
F V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+VCK
Sbjct: 354 FEVHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCK 175
Query: 507 DLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
DLSVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 174 DLSVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 70
>gb|AV795382.1|AV795382 AV795382 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-17-F20 3',
mRNA sequence
Length = 435
Score = 130 bits (278), Expect = 5e-029
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = -2 / -3
Query: 672 RVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDLSVV 493
+VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV++CKDLSVV
Sbjct: 304 QVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVV 125
Query: 492 DELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
DE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 124 DEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 35
>gb|BP621395.1|BP621395 BP621395 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-D20 3',
mRNA sequence
Length = 417
Score = 130 bits (278), Expect = 5e-029
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = -2 / -1
Query: 714 KGALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGV 535
K L G AF V ++V N G R G VFLF++PPA+ +P K L+GFEK+ L + V
Sbjct: 411 KPCLRGGSAF*VHIKVPNRGDREGIHPVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAV 232
Query: 534 VAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNL 415
V FKV++CKDLSVVDE+G RK+ LG H LHVGDLKH+L++
Sbjct: 231 VRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSI 112
>gb|CW842043.1|CW842043 ET11895.Ds3.04.14.2003.jw95.571 Arabidopsis thaliana Landsberg Ds
insertion lines Arabidopsis thaliana genomic clone
ET11895, DNA sequence
Length = 571
Score = 129 bits (276), Expect = 1e-028
Identities = 55/93 (59%), Positives = 67/93 (72%)
Frame = -2 / +1
Query: 681 VPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDL 502
V L V+N G R+G TVFLF++ P V +P K LLGFEK+ L + VV F V+VCKDL
Sbjct: 49 VHLNVKNTGDRAGSHTVFLFTTSPQVHGSPIKQLLGFEKIRLGKSEEAVVRFNVNVCKDL 228
Query: 501 SVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
SVVDE G RK+ALG H LHVG LKH+LN+ V*+
Sbjct: 229 SVVDETGKRKIALGHHLLHVGSLKHSLNISV*F 327
>gb|BP621418.1|BP621418 BP621418 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-G09 3',
mRNA sequence
Length = 424
Score = 128 bits (275), Expect = 1e-028
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = -2 / -2
Query: 672 RVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDLSVV 493
+VRN G R G TVFLF++PPA+ +P K LLGFEK+ L + VV FKV++CKDLSVV
Sbjct: 288 QVRNGGDREGIHTVFLFTTPPAIHGSPRKHLLGFEKIRLGKREEAVVRFKVEICKDLSVV 109
Query: 492 DELGNRKVALGSHTLHVGDLKHTL 421
DE+G RK+ LG H LHVGDLKH+L
Sbjct: 108 DEIGKRKIGLGKHLLHVGDLKHSL 37
>gb|BP601062.1|BP601062 BP601062 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-48-K08 3',
mRNA sequence
Length = 449
Score = 128 bits (274), Expect = 2e-028
Identities = 52/90 (57%), Positives = 68/90 (75%)
Frame = -2 / -1
Query: 672 RVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDLSVV 493
RVRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV++CKDLSVV
Sbjct: 365 RVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEPVVRFKVEICKDLSVV 186
Query: 492 DELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
DE+G K+ LG H LHVGDLKH+L++ +*+
Sbjct: 185 DEIGKSKIGLGKHLLHVGDLKHSLSIRI*F 96
>gb|BP598892.1|BP598892 BP598892 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-05-A22 3',
mRNA sequence
Length = 426
Score = 82.6 bits (174), Expect(2) = 3e-028
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = -2 / -3
Query: 549 GQAGVVAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
G+ VV FKV++CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 244 GKKAVVRFKVEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 98
Score = 64.8 bits (135), Expect(2) = 3e-028
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAG 538
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + G
Sbjct: 392 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEG 234
>gb|BP617500.1|BP617500 BP617500 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-24-D14 3',
mRNA sequence
Length = 439
Score = 100 bits (213), Expect(2) = 8e-028
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = -2 / -1
Query: 612 PAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDL 433
PA P K L+GFEK+ L + VV FKV++CKDLSVVDE+G RK+ LG+H LHVGDL
Sbjct: 307 PADSRIPEKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGKRKIGLGNHLLHVGDL 128
Query: 432 KHTLNLGV*W 403
KH+L++ +*+
Sbjct: 127 KHSLSIRI*F 98
Score = 45.5 bits (93), Expect(2) = 8e-028
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAP 592
G AF V ++VRN G R G TVFLF++PP + +P
Sbjct: 390 GSAFEVHIKVRNGGDREGIHTVFLFTTPPPIHGSP 286
>gb|BP607602.1|BP607602 BP607602 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-75-I02 3',
mRNA sequence
Length = 409
Score = 126 bits (269), Expect = 9e-028
Identities = 50/89 (56%), Positives = 66/89 (74%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVD 517
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV+FKV+
Sbjct: 390 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVSFKVE 211
Query: 516 VCKDLSVVDELGNRKVALGSHTLHVGDLK 430
+CKDLS+VDE+G RK+ LG H LHVG+ K
Sbjct: 210 ICKDLSLVDEIGKRKIGLGKHLLHVGEFK 124
>gb|BP616696.1|BP616696 BP616696 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-21-A02 3',
mRNA sequence
Length = 444
Score = 75.8 bits (159), Expect(2) = 7e-027
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = -2 / -1
Query: 534 VAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
V FKV++CK+LSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 228 VRFKVEICKNLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 97
Score = 67.0 bits (140), Expect(2) = 7e-027
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = -2 / -2
Query: 714 KGALCEGLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGV 535
K L G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + V
Sbjct: 407 KRCLRRGSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAV 228
Query: 534 VAFK 523
+ +
Sbjct: 227 LGLR 216
>gb|AI993943.1|AI993943 701494050 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701494050, mRNA sequence
Length = 318
Score = 122 bits (262), Expect = 9e-027
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = -2 / -3
Query: 657 GRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDELGN 478
G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FKV++CKDLSVVDE+G
Sbjct: 313 GDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFKVEICKDLSVVDEIGK 134
Query: 477 RKVALGSHTLHVGDLKHTLNLGV*W 403
RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 133 RKIGLGKHLLHVGDLKHSLSIRI*F 59
>gb|BP603244.1|BP603244 BP603244 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-58-A13 3',
mRNA sequence
Length = 428
Score = 71.6 bits (150), Expect(2) = 1e-026
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = -2 / -1
Query: 522 VDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLGV*W 403
V++CKDLSVVDE+G RK+ LG H LHVGDLKH+L++ +*+
Sbjct: 215 VEICKDLSVVDEIGKRKIGLGKHLLHVGDLKHSLSIRI*F 96
Score = 70.3 bits (147), Expect(2) = 1e-026
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -2 / -2
Query: 696 GLAFNVPLRVRNAGRRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFK 523
G AF V ++VRN G R G TVFLF++PPA+ +P K L+GFEK+ L + VV FK
Sbjct: 388 GSAFEVHIKVRNGGDREGIHTVFLFTTPPAIHGSPRKHLVGFEKIRLGKREEAVVRFK 215
>gb|BP641248.1|BP641248 BP641248 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-54-J12 3',
mRNA sequence
Length = 441
Score = 120 bits (257), Expect = 4e-026
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = -2 / -1
Query: 654 RRSGGPTVFLFSSPPAVPNAPAKPLLGFEKVSLEPGQAGVVAFKVDVCKDLSVVDELGNR 475
R+SG TVFLF++ P VP +P K LLGFEK+ L + V F ++VCKDLSVVDE G R
Sbjct: 315 RQSGTHTVFLFTTSPQVPGSPIKQLLGFEKIRLGKSEEAVFRFNLNVCKDLSVVDETGKR 136
Query: 474 KVALGSHTLHVGDLKHTLNLGV*W 403
K+ALG H LHVG LKH+LN+ V*+
Sbjct: 135 KIALGHHLLHVGSLKHSLNISV*F 64
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,277,761,346
Number of Sequences: 1013581
Number of extensions: 17539521
Number of successful extensions: 199472
Number of sequences better than 1.0e-020: 65
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 44565775474
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)