TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.3
(687 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA... 216 4e-055
gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-... 216 4e-055
gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana ... 216 4e-055
gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana... 216 4e-055
gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, compl... 216 4e-055
emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cD... 216 4e-055
ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G4... 216 4e-055
ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G4... 216 4e-055
ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G4... 216 4e-055
gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower... 215 2e-054
gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS... 215 2e-054
gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complet... 215 2e-054
gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, compl... 215 2e-054
ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G6... 215 2e-054
gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS... 211 2e-053
gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana... 207 3e-052
gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana... 205 1e-051
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 129 8e-050
gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana... 173 2e-049
gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana... 191 2e-047
gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana... 191 2e-047
gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana... 187 3e-046
gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana... 116 9e-043
gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana... 175 2e-042
gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana... 155 3e-042
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 93 6e-042
gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A... 93 7e-042
gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-... 170 5e-041
gb|BP665200.1|BP665200 BP665200 RAFL21 Arabidopsis thaliana... 95 4e-039
gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana ... 163 6e-039
gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana... 139 6e-038
gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucle... 139 6e-038
gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana... 139 6e-038
gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana... 159 1e-037
gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana... 158 2e-037
gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana... 155 1e-036
gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots ... 152 1e-035
gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana... 83 1e-035
gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana... 95 1e-034
gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana... 100 2e-034
gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana... 147 3e-034
gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana... 122 7e-033
gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana... 141 2e-032
gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana... 141 3e-032
gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana... 119 1e-031
gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana c... 135 2e-031
gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana... 109 1e-030
gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana... 115 5e-030
gb|BP867804.1|BP867804 BP867804 RAFL21 Arabidopsis thaliana... 133 6e-030
gb|BP844944.1|BP844944 BP844944 RAFL21 Arabidopsis thaliana... 113 7e-030
gb|BP850718.1|BP850718 BP850718 RAFL21 Arabidopsis thaliana... 130 4e-029
gb|BP848760.1|BP848760 BP848760 RAFL21 Arabidopsis thaliana... 71 6e-029
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 129 7e-029
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 129 7e-029
gb|BP597520.1|BP597520 BP597520 RAFL15 Arabidopsis thaliana... 123 4e-027
gb|BZ379263.1|BZ379263 SALK_113104.21.35.x Arabidopsis thal... 76 1e-024
gb|BP670363.1|BP670363 BP670363 RAFL21 Arabidopsis thaliana... 95 1e-021
gb|AV535104.1|AV535104 AV535104 Arabidopsis thaliana flower... 104 4e-021
>gb|F20137.1|F20137 ATTS6176 AC16H Arabidopsis thaliana cDNA clone TAP0004 similar to
Homo sapiens., mRNA sequence
Length = 574
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 143 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 322
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 323 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 430
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 417 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 238
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 237 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 142
>gb|AI998209.1|AI998209 701515770 A. thaliana, Columbia Col-0, rosette-2 Arabidopsis
thaliana cDNA clone 701515770, mRNA sequence
Length = 515
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / -1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 401 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 222
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 221 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 114
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 127 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 306
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 307 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 402
>gb|CK118493.1|CK118493 216o12.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011O12216
5-PRIME, mRNA sequence
Length = 582
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 155 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 334
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 335 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 442
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 429 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 250
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 249 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 154
>gb|BP562727.2|BP562727 BP562727 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 5',
mRNA sequence
Length = 491
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 149 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 328
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 329 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 436
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 423 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 244
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 243 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 148
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence
Length = 619
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 176 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 355
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 356 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 463
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 450 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 271
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 270 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 175
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 586
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 151 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 330
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 331 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 438
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 425 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 246
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 245 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 150
>ref|NM_130332.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.1 mRNA, complete cds
Length = 624
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 181 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 360
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 361 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 468
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 455 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 276
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 275 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 180
>ref|NM_180146.3| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.2 mRNA, complete cds
Length = 586
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 143 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 322
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 323 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 430
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 417 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 238
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 237 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 142
>ref|NM_201981.2| Arabidopsis thaliana unknown protein AT2G47640 transcript variant
AT2G47640.3 mRNA, complete cds
Length = 594
Score = 216 bits (467), Expect = 4e-055
Identities = 90/96 (93%), Positives = 93/96 (96%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 151 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 330
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 331 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 438
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 425 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 246
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 245 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 150
>gb|AV533116.1|AV533116 AV533116 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB056b01F 3', mRNA sequence
Length = 591
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = -1 / -2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 470 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 291
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 290 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 195
Score = 159 bits (342), Expect = 8e-038
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 196 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 375
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 376 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 471
Score = 107 bits (228), Expect = 4e-022
Identities = 47/106 (44%), Positives = 70/106 (66%)
Frame = +1 / +3
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
SLGVP+ D+D V+ +EHLADESI V+R+S L + + +L PH + ++HV V +KS N
Sbjct: 195 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 374
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLILVRH 609
AK+ VV AID++L V+LNTHH + + + L L L + ++ H
Sbjct: 375 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSLVGILFH 512
>gb|CB254025.1|CB254025 80-E015391-019-006-O19-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768O196Q 5-PRIME, mRNA sequence
Length = 535
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 130 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 309
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 310 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 405
Score = 159 bits (342), Expect = 8e-038
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 404 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 225
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 224 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 129
Score = 106 bits (227), Expect = 6e-022
Identities = 48/103 (46%), Positives = 68/103 (66%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
SLGVP+ D+D V+ +EHLADESI V+R+S L + + +L PH + ++HV V +KS N
Sbjct: 405 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 226
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLIL 600
AK+ VV AID++L V+LNTHH + + + L L L IL
Sbjct: 225 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSVGIL 97
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds
Length = 327
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 52 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 231
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 232 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 327
Score = 155 bits (334), Expect = 1e-036
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 326 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 147
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLL RQL++T VLFLTLII T+ GPVLN
Sbjct: 146 RPRSFLLFRQLIKT*VLFLTLIIRTESGPVLN 51
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence
Length = 646
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 175 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 354
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 355 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 450
Score = 159 bits (342), Expect = 8e-038
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 449 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 270
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 269 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 174
Score = 107 bits (228), Expect = 4e-022
Identities = 47/106 (44%), Positives = 70/106 (66%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
SLGVP+ D+D V+ +EHLADESI V+R+S L + + +L PH + ++HV V +KS N
Sbjct: 450 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 271
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLILVRH 609
AK+ VV AID++L V+LNTHH + + + L L L + ++ H
Sbjct: 270 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSLVGILFH 133
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds
Length = 1063
Score = 215 bits (463), Expect = 2e-054
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 172 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 351
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 352 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 447
Score = 159 bits (342), Expect = 8e-038
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 446 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 267
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 266 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 171
Score = 106 bits (227), Expect = 6e-022
Identities = 48/103 (46%), Positives = 68/103 (66%)
Frame = +1 / -2
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
SLGVP+ D+D V+ +EHLADESI V+R+S L + + +L PH + ++HV V +KS N
Sbjct: 447 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFSDIFKNHVAVPVKSPN 268
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLIL 600
AK+ VV AID++L V+LNTHH + + + L L L IL
Sbjct: 267 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSVGIL 139
>gb|CB264605.1|CB264605 49-E014658-035-002-A13-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA
clone MPIZp2000A132Q 5-PRIME, mRNA sequence
Length = 560
Score = 211 bits (455), Expect = 2e-053
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENV EMWTEVPKTGKG
Sbjct: 138 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVIEMWTEVPKTGKG 317
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 318 KKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 413
Score = 160 bits (343), Expect = 6e-038
Identities = 72/92 (78%), Positives = 75/92 (81%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 412 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISMTFSRTMLQCLSKALT 233
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
RP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 232 RPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 137
Score = 105 bits (225), Expect = 1e-021
Identities = 48/103 (46%), Positives = 68/103 (66%)
Frame = +1 / -1
Query: 292 SLGVPQHDDDRVAPEEHLADESILVHRQSLLFALASLGDLCPHLPHVLEHHVTVAIKSTN 471
SLGVP+ D+D V+ +EHLADESI V+R+S L + + +L PH + ++HV V +KS N
Sbjct: 413 SLGVPEDDND*VSTQEHLADESISVNRKSFLLSFSGFRNLSPHFYDIFKNHVAVPVKSPN 234
Query: 472 PAKQLLVVAAIDENLGVVLNTHH*Y*QRACAKFLFLFLPSLIL 600
AK+ VV AID++L V+LNTHH + + + L L L IL
Sbjct: 233 SAKEFPVVTAIDQHLSVILNTHHQNREWSSVELLLLSLSVGIL 105
>gb|AU226468.1|AU226468 AU226468 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-35-O15 3',
mRNA sequence
Length = 425
Score = 207 bits (446), Expect = 3e-052
Identities = 86/92 (93%), Positives = 89/92 (96%)
Frame = -1 / -2
Query: 555 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 376
PLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA
Sbjct: 424 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 245
Query: 375 LPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
LP+N+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 244 LPLNRDRFISKMFLRGDSVIIVLRNPK*EEER 149
Score = 145 bits (312), Expect = 1e-033
Identities = 66/88 (75%), Positives = 70/88 (79%)
Frame = +2 / +3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLF G AFFLP PVLGTSVHIS TFS TMLQ S A T
Sbjct: 162 HFGFLRTIMTESPRRNILLMNRSLFNGSAFFLPFPVLGTSVHISLTFSRTMLQCLSNALT 341
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRG 556
RP SFLL RQL++T VLFLTLII T+ G
Sbjct: 342 RPRSFLLFRQLIKT*VLFLTLIIRTESG 425
>gb|BP571612.1|BP571612 BP571612 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-76-O18 3',
mRNA sequence
Length = 451
Score = 205 bits (442), Expect = 1e-051
Identities = 85/92 (92%), Positives = 89/92 (96%)
Frame = -1 / -2
Query: 555 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 376
PLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVRE+WTEVPKTGKGKKKA
Sbjct: 429 PLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREIWTEVPKTGKGKKKA 250
Query: 375 LPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
LPVN+DRFI+KMFLRGDSVIIVLRNPK* R
Sbjct: 249 LPVNRDRFITKMFLRGDSVIIVLRNPK*EEER 154
Score = 141 bits (302), Expect = 3e-032
Identities = 64/88 (72%), Positives = 69/88 (78%)
Frame = +2 / +2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNIL+MN SLFTG AFFLP PV GTSV IS TFS TMLQ S A T
Sbjct: 167 HFGFLRTIMTESPRRNILVMNRSLFTGSAFFLPFPVFGTSVQISLTFSRTMLQCLSNALT 346
Query: 473 RPSSFLLLRQLMRTWVLFLTLIISTDRG 556
RP SFLL RQL++T VLFLTLII T+ G
Sbjct: 347 RPRSFLLFRQLIKT*VLFLTLIIRTESG 430
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
Length = 110257
Score = 129 bits (277), Expect(2) = 8e-050
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = -1 / -2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 89064 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 88903
Score = 90.0 bits (190), Expect(2) = 8e-050
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -1 / -3
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
VPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 88817 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 88701
Score = 89.5 bits (189), Expect(2) = 1e-033
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +2 / +2
Query: 407 TSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
TSVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 88904 TSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 89065
Score = 76.2 bits (160), Expect(2) = 1e-033
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRT 430
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GT RT
Sbjct: 88702 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGT*KKTQRT 88839
>gb|BP613407.1|BP613407 BP613407 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-93-A15 3',
mRNA sequence
Length = 514
Score = 173 bits (373), Expect(2) = 2e-049
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = -1 / -3
Query: 510 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLR 331
LINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLR
Sbjct: 410 LINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLR 231
Query: 330 GDSVIIVLRNPK* 292
GDSVIIVLRNPK*
Sbjct: 230 GDSVIIVLRNPK* 192
Score = 127 bits (273), Expect(2) = 1e-032
Identities = 57/72 (79%), Positives = 59/72 (81%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 193 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 372
Query: 473 RPSSFLLLRQLM 508
RP SFLLLRQL+
Sbjct: 373 RPRSFLLLRQLI 408
Score = 44.6 bits (91), Expect(2) = 2e-049
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = -1 / -2
Query: 567 FSTGPLSVLMMSVKNNTQVL 508
F+TGPLSVLMMSVKNNTQV+
Sbjct: 468 FNTGPLSVLMMSVKNNTQVV 409
Score = 34.5 bits (69), Expect(2) = 1e-032
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 512 TWVLFLTLIISTDRGPVLN 568
T VLFLTLII T+ GPVLN
Sbjct: 413 T*VLFLTLIIKTESGPVLN 469
>gb|AV819279.1|AV819279 AV819279 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-03-H06 3',
mRNA sequence
Length = 435
Score = 191 bits (412), Expect = 2e-047
Identities = 79/81 (97%), Positives = 81/81 (100%)
Frame = -1 / -2
Query: 534 SVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDR 355
SVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DR
Sbjct: 434 SVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDR 255
Query: 354 FISKMFLRGDSVIIVLRNPK* 292
FISKMFLRGDSVIIVLRNPK*
Sbjct: 254 FISKMFLRGDSVIIVLRNPK* 192
Score = 140 bits (301), Expect = 3e-032
Identities = 64/81 (79%), Positives = 66/81 (81%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 193 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 372
Query: 473 RPSSFLLLRQLMRTWVLFLTL 535
RP SFLLLRQL+ T VLFLTL
Sbjct: 373 RPRSFLLLRQLINT*VLFLTL 435
>gb|BP864880.1|BP864880 BP864880 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-72-C14 5',
mRNA sequence
Length = 390
Score = 191 bits (411), Expect = 2e-047
Identities = 77/81 (95%), Positives = 81/81 (100%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 147 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 326
Query: 387 KKKALPVNKDRFISKMFLRGD 325
K+KALPVN+DRFISKMFLRGD
Sbjct: 327 KEKALPVNRDRFISKMFLRGD 389
Score = 133 bits (286), Expect = 4e-030
Identities = 62/81 (76%), Positives = 64/81 (79%)
Frame = +2 / -3
Query: 326 SPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQL 505
SP RNILLMN SL TGRAF P PV GTSVHIS TFS TMLQ SKA TRP SFLLLRQL
Sbjct: 388 SPRRNILLMNRSLLTGRAFSFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQL 209
Query: 506 MRTWVLFLTLIISTDRGPVLN 568
+ T VLFLTLII T+ GPVLN
Sbjct: 208 INT*VLFLTLIIKTESGPVLN 146
>gb|BP866835.1|BP866835 BP866835 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-79-B01 5',
mRNA sequence
Length = 381
Score = 187 bits (403), Expect = 3e-046
Identities = 76/79 (96%), Positives = 79/79 (100%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 143 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 322
Query: 387 KKKALPVNKDRFISKMFLR 331
KKKALPVN+DRFISKMFLR
Sbjct: 323 KKKALPVNRDRFISKMFLR 379
Score = 135 bits (290), Expect = 1e-030
Identities = 62/80 (77%), Positives = 64/80 (80%)
Frame = +2 / -1
Query: 329 PLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLM 508
P RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA TRP SFLLLRQL+
Sbjct: 381 PRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLI 202
Query: 509 RTWVLFLTLIISTDRGPVLN 568
T VLFLTLII T+ GPVLN
Sbjct: 201 NT*VLFLTLIIKTESGPVLN 142
>gb|BP581041.1|BP581041 BP581041 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-30-D07 3',
mRNA sequence
Length = 467
Score = 116 bits (249), Expect(3) = 9e-043
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = -1 / -3
Query: 480 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD 325
L + AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRG+
Sbjct: 384 LAELGAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGE 229
Score = 83.5 bits (176), Expect(3) = 2e-025
Identities = 38/54 (70%), Positives = 38/54 (70%)
Frame = +2 / +2
Query: 326 SPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSF 487
SP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA F
Sbjct: 230 SPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKAPNSAKEF 391
Score = 72.5 bits (152), Expect(3) = 9e-043
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -1 / -2
Query: 555 PLSVLMMSVKNNTQVLINCRNNKKLLGRVRAF 460
PLS+LMMSVKNNTQVLINCRNN+KLLGRVR F
Sbjct: 460 PLSILMMSVKNNTQVLINCRNNRKLLGRVRGF 365
Score = 47.3 bits (97), Expect(3) = 2e-025
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +2 / +3
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIISTDRG 556
K TRP SFLLLRQL+ T VLFLTLII + G
Sbjct: 366 KPLTRPRSFLLLRQLINT*VLFLTLIIKIESG 461
Score = 24.9 bits (48), Expect(3) = 9e-043
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -3 / -3
Query: 334 QGRLGHHRAEEPQV 293
+G L H+R +EPQV
Sbjct: 237 RGELSHYRPQEPQV 196
Score = 24.9 bits (48), Expect(3) = 2e-025
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTE 325
HLGFL T+MTE
Sbjct: 196 HLGFLRTIMTE 228
>gb|BP821598.1|BP821598 BP821598 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-58-J16 5',
mRNA sequence
Length = 398
Score = 175 bits (376), Expect = 2e-042
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCR N+KLLGRVRAFDRHCNMVLENVREMWTEV K GK
Sbjct: 142 FNTGPLSVLMMSVKNNTQVLINCRKNRKLLGRVRAFDRHCNMVLENVREMWTEVRKLGKA 321
Query: 387 KKKALPVNKDRFISKMFLRGDSVII 313
++K +N+DRFISKMFLRGDSVII
Sbjct: 322 RRKHFRLNRDRFISKMFLRGDSVII 396
Score = 122 bits (261), Expect = 1e-026
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +2 / -1
Query: 314 MMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLL 493
+MTESP RNILLMN SLF+ + F L P TSVHIS TFS TMLQ S A TRP SFL
Sbjct: 395 IMTESPRRNILLMNRSLFSRKCFLLAFPSFRTSVHISLTFSRTMLQCLSNALTRPRSFLF 216
Query: 494 LRQLMRTWVLFLTLIISTDRGPVLN 568
RQL++T VLFLTLII T+ GPVLN
Sbjct: 215 FRQLIKT*VLFLTLIIRTESGPVLN 141
>gb|BP815339.1|BP815339 BP815339 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-38-I16 5',
mRNA sequence
Length = 391
Score = 155 bits (334), Expect(2) = 3e-042
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -1 / +3
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 144 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 323
Query: 387 KKKAL 373
KKKAL
Sbjct: 324 KKKAL 338
Score = 110 bits (234), Expect(2) = 5e-026
Identities = 50/65 (76%), Positives = 52/65 (80%)
Frame = +2 / -1
Query: 374 RAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIISTDR 553
RAFF P PV GTSVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII T+
Sbjct: 337 RAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTES 158
Query: 554 GPVLN 568
GPVLN
Sbjct: 157 GPVLN 143
Score = 38.6 bits (78), Expect(2) = 3e-042
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1 / +2
Query: 393 KGKKKALPVNKDRFISKMFLRGDSV 319
K K+++ VN+D FI KMFLRGDSV
Sbjct: 317 KRKEESSSVNRDGFIRKMFLRGDSV 391
Score = 29.9 bits (59), Expect(2) = 5e-026
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 320 TESPLRNILLMNLSLFT 370
TESP RNI LMN SL T
Sbjct: 390 TESPRRNIFLMNPSLLT 340
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete
sequence
Length = 98937
Score = 92.7 bits (196), Expect(3) = 6e-042
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -1 / -1
Query: 516 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
QVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 10515 QVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 10405
Score = 91.8 bits (194), Expect(3) = 6e-042
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = -1 / -2
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
VPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 10325 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 10197
Score = 75.3 bits (158), Expect(2) = 1e-024
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GT
Sbjct: 10210 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGT 10326
Score = 60.2 bits (125), Expect(2) = 1e-024
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +2 / +2
Query: 398 VLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
+L TSVHIS TFS TMLQ S A TRP SFLL RQL++T
Sbjct: 10397 ILATSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT 10513
Score = 44.1 bits (90), Expect(3) = 6e-042
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -1 / -3
Query: 567 FSTGPLSVLMMSVKNNTQV 511
F+TGPLSVLMMSVKNNTQV
Sbjct: 10756 FNTGPLSVLMMSVKNNTQV 10700
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
sequence
Length = 106355
Score = 92.7 bits (196), Expect(3) = 7e-042
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -1 / +2
Query: 516 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 406
QVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEV
Sbjct: 5561 QVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEV 5671
Score = 91.8 bits (194), Expect(3) = 7e-042
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = -1 / +3
Query: 408 VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
VPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK* R
Sbjct: 5751 VPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EEER 5879
Score = 75.3 bits (158), Expect(2) = 1e-024
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGT 409
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GT
Sbjct: 5866 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGT 5750
Score = 60.2 bits (125), Expect(2) = 1e-024
Identities = 27/39 (69%), Positives = 30/39 (76%)
Frame = +2 / -3
Query: 398 VLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRT 514
+L TSVHIS TFS TMLQ S A TRP SFLL RQL++T
Sbjct: 5679 ILATSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT 5563
Score = 44.1 bits (90), Expect(3) = 7e-042
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQV 511
F+TGPLSVLMMSVKNNTQV
Sbjct: 5320 FNTGPLSVLMMSVKNNTQV 5376
>gb|AI999102.1|AI999102 701554462 A. thaliana, Columbia Col-0, rosette-3 Arabidopsis
thaliana cDNA clone 701554462, mRNA sequence
Length = 379
Score = 170 bits (365), Expect = 5e-041
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = -1 / -1
Query: 504 NCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGD 325
NCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGD
Sbjct: 379 NCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGD 200
Query: 324 SVIIVLRNPK* 292
SVIIVLRNPK*
Sbjct: 199 SVIIVLRNPK* 167
Score = 125 bits (268), Expect = 1e-027
Identities = 56/70 (80%), Positives = 57/70 (81%)
Frame = +2 / +3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 168 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 347
Query: 473 RPSSFLLLRQ 502
RP SFLLLRQ
Sbjct: 348 RPRSFLLLRQ 377
>gb|BP665200.1|BP665200 BP665200 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-15-H11 3',
mRNA sequence
Length = 408
Score = 94.5 bits (200), Expect(4) = 4e-039
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = -1 / -1
Query: 489 KKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALP 370
+KLLGRVRAFDRH NMVLENVREMWTEVPKTGKGKKKALP
Sbjct: 288 QKLLGRVRAFDRHSNMVLENVREMWTEVPKTGKGKKKALP 169
Score = 64.3 bits (134), Expect(3) = 1e-021
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +2 / +2
Query: 371 GRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSF 487
G AFFLP PV GTSVHIS TFS TML+ S A TRP SF
Sbjct: 170 GSAFFLPFPVFGTSVHISLTFSRTMLECLSNALTRPRSF 286
Score = 60.2 bits (125), Expect(4) = 4e-039
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = -1 / -3
Query: 387 KKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SPNR 280
++++ VN+DRFISKMFLRGDSVII+LRNPK* R
Sbjct: 187 QEESTSVNRDRFISKMFLRGDSVIILLRNPK*EEER 80
Score = 47.8 bits (98), Expect(3) = 1e-021
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFT 370
H GFL +MTESP RNILLMN SLFT
Sbjct: 93 HFGFLRRIMTESPRRNILLMNRSLFT 170
Score = 40.9 bits (83), Expect(4) = 4e-039
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1 / -3
Query: 567 FSTGPLSVLMMSVKNNTQ 514
F+TGPLSVLMMS+KNNTQ
Sbjct: 364 FNTGPLSVLMMSLKNNTQ 311
Score = 30.9 bits (61), Expect(3) = 1e-021
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 518 VLFLTLIISTDRGPVLN 568
VLFL LII T+ GPVLN
Sbjct: 315 VLFLRLIIRTESGPVLN 365
Score = 24.0 bits (46), Expect(4) = 4e-039
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 513 VLINCRNNKKLLG 475
VLIN RNN+ LG
Sbjct: 311 VLINSRNNRNFLG 273
>gb|BP788381.1|BP788381 BP788381 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-33-J03 3',
mRNA sequence
Length = 403
Score = 163 bits (350), Expect = 6e-039
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = -1 / -3
Query: 498 RNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSV 319
RNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSV
Sbjct: 401 RNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSV 222
Query: 318 IIVLRNPK* 292
IIVLRNPK*
Sbjct: 221 IIVLRNPK* 195
Score = 123 bits (263), Expect = 6e-027
Identities = 55/69 (79%), Positives = 56/69 (81%)
Frame = +2 / +1
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA T
Sbjct: 196 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALT 375
Query: 473 RPSSFLLLR 499
RP SFLLLR
Sbjct: 376 RPRSFLLLR 402
>gb|AV832022.1|AV832022 AV832022 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 5',
mRNA sequence
Length = 547
Score = 139 bits (298), Expect(2) = 6e-038
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = -1 / +2
Query: 465 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 254 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 427
Score = 104 bits (222), Expect(2) = 1e-033
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +2 / -2
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKA 466
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA
Sbjct: 426 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 253
Score = 60.6 bits (126), Expect(2) = 1e-033
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / -1
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
K+ TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 259 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 152
Score = 40.5 bits (82), Expect(2) = 6e-038
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3 / +2
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF 461
H ++ +DEC*E H G QLP QQE WP F
Sbjct: 158 HWTTLCFDDEC*E*HSGVDQLP*QQETPWPS*AF 259
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein
(F26K9.270) mRNA, complete cds
Length = 541
Score = 139 bits (298), Expect(2) = 6e-038
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = -1 / +1
Query: 465 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 256 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 429
Score = 104 bits (222), Expect(2) = 1e-033
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKA 466
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA
Sbjct: 428 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 255
Score = 60.6 bits (126), Expect(2) = 1e-033
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / -2
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
K+ TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 261 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 154
Score = 40.5 bits (82), Expect(2) = 6e-038
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3 / +1
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF 461
H ++ +DEC*E H G QLP QQE WP F
Sbjct: 160 HWTTLCFDDEC*E*HSGVDQLP*QQETPWPS*AF 261
>gb|AV818857.1|AV818857 AV818857 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-01-A19 3',
mRNA sequence
Length = 412
Score = 139 bits (298), Expect(2) = 6e-038
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = -1 / -1
Query: 465 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 286 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 113
Score = 104 bits (222), Expect(2) = 1e-033
Identities = 46/58 (79%), Positives = 47/58 (81%)
Frame = +2 / +3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKA 466
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SKA
Sbjct: 114 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKA 287
Score = 60.6 bits (126), Expect(2) = 1e-033
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
K+ TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 281 KSLTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 388
Score = 40.5 bits (82), Expect(2) = 6e-038
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -3 / -1
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWPGSCF 461
H ++ +DEC*E H G QLP QQE WP F
Sbjct: 382 HWTTLCFDDEC*E*HSGVDQLP*QQETPWPS*AF 281
>gb|BP854615.1|BP854615 BP854615 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-23-N20 5',
mRNA sequence
Length = 371
Score = 159 bits (341), Expect = 1e-037
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 169 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 348
Query: 387 KKKALP 370
KKKALP
Sbjct: 349 KKKALP 366
Score = 112 bits (240), Expect = 9e-024
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = +2 / -1
Query: 371 GRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIISTD 550
GRAFF P PV GTSVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII T+
Sbjct: 365 GRAFFFPFPVFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTE 186
Query: 551 RGPVLN 568
GPVLN
Sbjct: 185 SGPVLN 168
>gb|BP621376.1|BP621376 BP621376 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-41-B20 3',
mRNA sequence
Length = 426
Score = 158 bits (339), Expect = 2e-037
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = -1 / -3
Query: 516 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 337
+VLIN NN+KLLGRVRAFDRH NMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMF
Sbjct: 415 RVLINSPNNRKLLGRVRAFDRHSNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMF 236
Query: 336 LRGDSVIIVLRNP 298
LRGDSVIIVLR P
Sbjct: 235 LRGDSVIIVLRTP 197
Score = 117 bits (250), Expect = 4e-025
Identities = 53/73 (72%), Positives = 57/73 (78%)
Frame = +2 / +3
Query: 296 LGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTR 475
LG L T+MTESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TML+ SKA TR
Sbjct: 195 LGVLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLECLSKALTR 374
Query: 476 PSSFLLLRQLMRT 514
P SFLLL +L+ T
Sbjct: 375 PRSFLLLGELINT 413
>gb|BP851888.1|BP851888 BP851888 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-N19 5',
mRNA sequence
Length = 388
Score = 155 bits (334), Expect = 1e-036
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG
Sbjct: 167 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 346
Query: 387 KKKAL 373
KKKAL
Sbjct: 347 KKKAL 361
Score = 105 bits (225), Expect = 1e-021
Identities = 48/64 (75%), Positives = 51/64 (79%)
Frame = +2 / -2
Query: 377 AFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRG 556
AFFLP PV GTSVHIS TFS TMLQ S A TRP SFLL RQL++T VLFLTLII T+ G
Sbjct: 357 AFFLPFPVFGTSVHISLTFSRTMLQCLSNALTRPRSFLLFRQLIKT*VLFLTLIIRTESG 178
Query: 557 PVLN 568
PVLN
Sbjct: 177 PVLN 166
>gb|AV549536.1|AV549536 AV549536 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09a07R 5', mRNA sequence
Length = 352
Score = 152 bits (326), Expect = 1e-035
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = -1 / +1
Query: 480 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRN 301
LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRN
Sbjct: 1 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRN 180
Query: 300 PK*SPNR 280
PK* R
Sbjct: 181 PK*EEER 201
Score = 109 bits (232), Expect = 1e-022
Identities = 48/62 (77%), Positives = 49/62 (79%)
Frame = +2 / -3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKART 472
H GFL T+MTESP RNILLMN SLFTG AFFLP PV GTSVHIS TFS TMLQ S A T
Sbjct: 188 HFGFLRTIMTESPRRNILLMNRSLFTGSAFFLPFPVFGTSVHISLTFSRTMLQCLSNALT 9
Query: 473 RP 478
RP
Sbjct: 8 RP 3
>gb|BP636278.1|BP636278 BP636278 RAFL18 Arabidopsis thaliana cDNA clone RAFL18-03-P22 3',
mRNA sequence
Length = 469
Score = 83.1 bits (175), Expect(3) = 1e-035
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = -1 / -3
Query: 402 KTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
+TGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 350 ETGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 240
Score = 65.2 bits (136), Expect(3) = 1e-035
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -1 / -1
Query: 480 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKK 379
L + AFDRHCNMVLENVREMWTEVPK K ++K
Sbjct: 427 LAELGAFDRHCNMVLENVREMWTEVPKPEKERRK 326
Score = 41.8 bits (85), Expect(3) = 1e-035
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 519 TQVLINCRNNKKLLGRVRAF 460
TQ LINCRNN KLLGRVR F
Sbjct: 467 TQWLINCRNNTKLLGRVRGF 408
>gb|BP650469.1|BP650469 BP650469 RAFL19 Arabidopsis thaliana cDNA clone RAFL19-84-H22 3',
mRNA sequence
Length = 410
Score = 95.0 bits (201), Expect(2) = 1e-034
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = -1 / -1
Query: 510 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKA 376
LINC NN+KLLGRVRAFDRHCNMVLENVREMWTEVPKT K ++ +
Sbjct: 410 LINCLNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTEKKEESS 276
Score = 73.9 bits (155), Expect(2) = 1e-034
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -1 / -2
Query: 393 KGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 292
K KKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 295 KRKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 194
>gb|BP858325.1|BP858325 BP858325 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-36-N11 5',
mRNA sequence
Length = 398
Score = 100 bits (212), Expect(2) = 2e-034
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = -1 / +1
Query: 480 LGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISK 343
L + FDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFIS+
Sbjct: 232 LAELGPFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISQ 369
Score = 68.9 bits (144), Expect(3) = 5e-021
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = +2 / -1
Query: 347 LMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSF 487
LMN SL TGRAFF P PV GTSVHIS TFS TMLQ SK F
Sbjct: 365 LMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSKGPNSAKEF 225
Score = 68.0 bits (142), Expect(2) = 2e-034
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1 / +3
Query: 546 VLMMSVKNNTQVLINCRNNKKLLGRVRAF 460
VLMMSVKNNTQVLINCRNN+KLLGRVRAF
Sbjct: 165 VLMMSVKNNTQVLINCRNNRKLLGRVRAF 251
Score = 49.2 bits (101), Expect(3) = 5e-021
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +2 / -2
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIIST 547
KA TRP SFLLLRQL+ T VLFLTLII T
Sbjct: 250 KALTRPRSFLLLRQLINT*VLFLTLIIKT 164
Score = 22.6 bits (43), Expect(3) = 5e-021
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 317 MTESPLRNIL 346
MTESP RNIL
Sbjct: 396 MTESPRRNIL 367
>gb|BP869127.1|BP869127 BP869127 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-86-N16 5',
mRNA sequence
Length = 361
Score = 147 bits (316), Expect = 3e-034
Identities = 63/72 (87%), Positives = 65/72 (90%)
Frame = -1 / +1
Query: 561 TGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKK 382
TGPLSV MMSVKNNTQVLIN RN +KLLGRVRA DRH MVLENVREMWTEVPKTGKGK
Sbjct: 145 TGPLSVWMMSVKNNTQVLINGRNKRKLLGRVRASDRHGKMVLENVREMWTEVPKTGKGKN 324
Query: 381 KALPVNKDRFIS 346
KALPVN+DRFIS
Sbjct: 325 KALPVNRDRFIS 360
Score = 111 bits (236), Expect = 3e-023
Identities = 51/74 (68%), Positives = 55/74 (74%)
Frame = +2 / -3
Query: 347 LMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLF 526
LMN SL TGRA F P PV GTSVHIS TFS T+L S+A TRP SFLLLR L+ T VLF
Sbjct: 359 LMNRSLLTGRALFFPFPVFGTSVHISLTFSRTILPCLSEALTRPRSFLLLRPLINT*VLF 180
Query: 527 LTLIISTDRGPVLN 568
LTLII T+ GPV N
Sbjct: 179 LTLIIQTESGPVFN 138
>gb|AV820625.1|AV820625 AV820625 RAFL11 Arabidopsis thaliana cDNA clone RAFL11-11-H04 3',
mRNA sequence
Length = 404
Score = 122 bits (262), Expect(2) = 7e-033
Identities = 55/75 (73%), Positives = 59/75 (78%)
Frame = -1 / -2
Query: 516 QVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMF 337
QVLINCRN+ KLLGRVR L+ + EVPKTGKGKKKALPVN+DRFISKMF
Sbjct: 337 QVLINCRNDTKLLGRVRLLTGTATWFLKMSEKCGAEVPKTGKGKKKALPVNRDRFISKMF 158
Query: 336 LRGDSVIIVLRNPK* 292
LRGDSVIIVLRNPK*
Sbjct: 157 LRGDSVIIVLRNPK* 113
Score = 77.1 bits (162), Expect(4) = 7e-024
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 293 HLGFLSTMMTESPLRNILLMNLSLFTGRAFFLPLPVLGTS 412
HLGFL T+MTESP RNILLMN SL TGRAFF P PV GTS
Sbjct: 114 HLGFLRTIMTESPRRNILLMNRSLLTGRAFFFPFPVFGTS 233
Score = 40.0 bits (81), Expect(2) = 7e-033
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1 / -1
Query: 567 FSTGPLSVLMMSVKNNT 517
F+TGPLSVLMMSVKNNT
Sbjct: 389 FNTGPLSVLMMSVKNNT 339
Score = 34.1 bits (68), Expect(4) = 7e-024
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +1
Query: 518 VLFLTLIISTDRGPVLN 568
VLFLTLII T+ GPVLN
Sbjct: 340 VLFLTLIIKTESGPVLN 390
Score = 29.0 bits (57), Expect(4) = 7e-024
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 413 VHISRTFSSTMLQWRSKA 466
+HIS TFS TMLQ SKA
Sbjct: 235 LHISLTFSRTMLQCLSKA 288
Score = 27.2 bits (53), Expect(4) = 7e-024
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 461 KARTRPSSFLLLRQLMRT 514
K+ TRP SF+ LRQL+ T
Sbjct: 282 KSLTRPRSFVSLRQLINT 335
>gb|BP831765.1|BP831765 BP831765 RAFL19 Arabidopsis thaliana cDNA clone RAFL22-90-C10 5',
mRNA sequence
Length = 364
Score = 141 bits (303), Expect = 2e-032
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKT K
Sbjct: 146 FNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTRKR 325
Query: 387 KKKA 376
K+++
Sbjct: 326 KEES 337
Score = 94.1 bits (199), Expect(2) = 8e-022
Identities = 44/57 (77%), Positives = 46/57 (80%)
Frame = +2 / -2
Query: 398 VLGTSVHISRTFSSTMLQWRSKARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
V GTSVHIS TFS TMLQ SKA TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 315 VFGTSVHISLTFSRTMLQCLSKALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 145
Score = 31.8 bits (63), Expect(2) = 8e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 350 MNLSLFTGRAFFLPLP 397
MN SL TGRAFF P P
Sbjct: 364 MNRSLLTGRAFFFPFP 317
>gb|BP623210.1|BP623210 BP623210 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-05-P16 3',
mRNA sequence
Length = 368
Score = 141 bits (302), Expect = 3e-032
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = -1 / -2
Query: 465 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*SP 286
AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSVIIVLRNPK*
Sbjct: 367 AFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*EE 188
Query: 285 NR 280
R
Sbjct: 187 ER 182
>gb|BP864529.1|BP864529 BP864529 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-70-I12 5',
mRNA sequence
Length = 390
Score = 119 bits (254), Expect(2) = 1e-031
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = -1 / +3
Query: 462 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSV 319
FDRHCNMVLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDSV
Sbjct: 246 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSV 389
Score = 85.4 bits (180), Expect(2) = 3e-028
Identities = 38/48 (79%), Positives = 38/48 (79%)
Frame = +2 / -3
Query: 320 TESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 463
TESP RNILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SK
Sbjct: 388 TESPRRNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSK 245
Score = 62.0 bits (129), Expect(2) = 3e-028
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2 / -2
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
KA TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 248 KALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 141
Score = 39.6 bits (80), Expect(2) = 1e-031
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -3 / +3
Query: 562 HRPSVSTNDEC*EQHPGSHQLPQQQEAAWP 473
H ++ +DEC*E H G QLP QQE WP
Sbjct: 147 HWTTLCFDDEC*E*HSGVDQLP*QQETPWP 236
>gb|H36625.1|H36625 14293 Lambda-PRL2 Arabidopsis thaliana cDNA clone 175N1T7, mRNA
sequence
Length = 450
Score = 135 bits (290), Expect(2) = 2e-031
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSV MMSVKNNTQVLINCRNN+KLLGRVRAF RHCNMVLEN R MWTEVPKTGKG
Sbjct: 161 FNTGPLSVXMMSVKNNTQVLINCRNNRKLLGRVRAFXRHCNMVLENXRXMWTEVPKTGKG 340
Query: 387 KKK 379
++
Sbjct: 341 XER 349
Score = 22.1 bits (42), Expect(2) = 2e-031
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1 / +2
Query: 387 KKKALPVNKDRFISK 343
++K N+DRFISK
Sbjct: 344 ERKXFLFNRDRFISK 388
>gb|BP851641.1|BP851641 BP851641 RAFL21 Arabidopsis thaliana cDNA clone RAFL25-17-B11 5',
mRNA sequence
Length = 396
Score = 109 bits (233), Expect(2) = 1e-030
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1 / +3
Query: 507 INCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAL 373
+NCRNN+KLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG KKAL
Sbjct: 228 LNCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGNKKAL 362
Score = 46.0 bits (94), Expect(2) = 1e-030
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -1 / +2
Query: 567 FSTGPLSVLMMSVKNNTQVL 508
F+TGPLSVLMMSVKNNTQVL
Sbjct: 167 FNTGPLSVLMMSVKNNTQVL 226
>gb|BP868432.1|BP868432 BP868432 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-84-F15 5',
mRNA sequence
Length = 396
Score = 115 bits (245), Expect(2) = 5e-030
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = -1 / +2
Query: 462 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVI 316
FDRHCNMVLENVREMWTEVPKTGKGKKKALPV +DRFISKMFL GDSVI
Sbjct: 248 FDRHCNMVLENVREMWTEVPKTGKGKKKALPVKRDRFISKMFLGGDSVI 394
Score = 86.3 bits (182), Expect(2) = 2e-028
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = +2 / -1
Query: 314 MMTESPLRNILLMNLSLFTGRAFFLPLPVLGTSVHISRTFSSTMLQWRSK 463
+MTESP +NILLMN SL TGRAFF P PV GTSVHIS TFS TMLQ SK
Sbjct: 396 IMTESPPKNILLMNRSLLTGRAFFFPFPVFGTSVHISLTFSRTMLQCLSK 247
Score = 62.0 bits (129), Expect(2) = 2e-028
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2 / -3
Query: 461 KARTRPSSFLLLRQLMRTWVLFLTLIISTDRGPVLN 568
KA TRP SFLLLRQL+ T VLFLTLII T+ GPVLN
Sbjct: 250 KALTRPRSFLLLRQLINT*VLFLTLIIKTESGPVLN 143
Score = 38.2 bits (77), Expect(2) = 5e-030
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / +2
Query: 541 NDEC*EQHPGSHQLPQQQEAAWP 473
+DEC*E H G QLP QQE WP
Sbjct: 170 DDEC*E*HSGVDQLP*QQETPWP 238
>gb|BP867804.1|BP867804 BP867804 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-82-E04 5',
mRNA sequence
Length = 377
Score = 133 bits (285), Expect = 6e-030
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = -1 / +1
Query: 567 FSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKG 388
F+TGPLSV+MMSVKNNT+VLINCR N+KLLGRVRA DRHC+MV E VREMWTEVPKTGKG
Sbjct: 163 FNTGPLSVIMMSVKNNTKVLINCRKNRKLLGRVRASDRHCHMVFETVREMWTEVPKTGKG 342
Query: 387 KKK 379
++K
Sbjct: 343 RRK 351
>gb|BP844944.1|BP844944 BP844944 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-92-A02 5',
mRNA sequence
Length = 383
Score = 113 bits (241), Expect(2) = 7e-030
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = -1 / +1
Query: 510 LINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKALPVNKDRF 352
LINCR N+KL GRVRAFDRHCNMVLENVREMW EV KTGKG KKAL VN+DRF
Sbjct: 223 LINCRKNRKLFGRVRAFDRHCNMVLENVREMWPEVRKTGKGTKKALAVNRDRF 381
Score = 39.6 bits (80), Expect(2) = 7e-030
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / +2
Query: 564 STGPLSVLMMSVKNNTQV 511
+TGPLSV MMSVKNNTQV
Sbjct: 170 NTGPLSVFMMSVKNNTQV 223
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,311,228,160
Number of Sequences: 1013581
Number of extensions: 17156040
Number of successful extensions: 127953
Number of sequences better than 1.0e-020: 64
length of database: 302,980,290
effective HSP length: 55
effective length of database: 247,233,335
effective search space used: 42771366955
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)