TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.448
(911 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA... 316 7e-085
gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana ... 316 7e-085
gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots ... 316 7e-085
gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots ... 316 7e-085
gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots ... 316 7e-085
gb|AY050966.1| Arabidopsis thaliana putative ribosomal prot... 316 7e-085
gb|AY096616.1| Arabidopsis thaliana putative ribosomal prot... 316 7e-085
gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complet... 316 7e-085
ref|NM_120988.2| Arabidopsis thaliana structural constituen... 316 7e-085
gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots ... 314 2e-084
gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana ... 309 9e-083
gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana ... 309 9e-083
gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf A... 309 9e-083
gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots ... 309 9e-083
gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots ... 309 9e-083
gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 309 9e-083
gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRN... 309 9e-083
emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cD... 309 9e-083
emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRN... 309 9e-083
ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROT... 309 9e-083
emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal pr... 308 2e-082
gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA... 307 3e-082
gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA... 307 3e-082
gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA... 307 3e-082
ref|NM_120987.2| Arabidopsis thaliana structural constituen... 303 5e-081
gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana... 302 1e-080
gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complet... 301 3e-080
gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots ... 299 7e-080
gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots ... 295 2e-078
ref|NM_123730.1| Arabidopsis thaliana structural constituen... 292 8e-078
gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, compl... 292 1e-077
ref|NM_120986.2| Arabidopsis thaliana structural constituen... 292 1e-077
ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL P... 194 2e-077
gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA... 273 2e-076
emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and... 195 5e-072
gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots ... 270 6e-071
emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5... 202 1e-070
gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid... 268 2e-070
gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsi... 195 7e-069
gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots ... 218 9e-068
gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green ... 253 4e-066
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 195 1e-064
gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana c... 249 1e-064
gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana... 246 7e-064
gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana... 246 7e-064
dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosom... 184 8e-064
gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State cl... 201 1e-062
gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower... 237 4e-061
gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana... 223 3e-060
gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana... 160 3e-060
gb|AA712740.1|AA712740 32299 Lambda-PRL2 Arabidopsis thalia... 210 6e-060
gb|BP584508.1|BP584508 BP584508 RAFL14 Arabidopsis thaliana... 228 2e-058
gb|T21856.1|T21856 3864 Lambda-PRL2 Arabidopsis thaliana cD... 227 4e-058
gb|BE038972.1|BE038972 AB07H11 AB Arabidopsis thaliana cDNA... 226 8e-058
gb|BP607962.1|BP607962 BP607962 RAFL16 Arabidopsis thaliana... 220 5e-056
gb|BP571507.1|BP571507 BP571507 RAFL14 Arabidopsis thaliana... 214 4e-054
gb|BP593823.1|BP593823 BP593823 RAFL15 Arabidopsis thaliana... 211 2e-053
gb|BP836703.1|BP836703 BP836703 RAFL19 Arabidopsis thaliana... 210 7e-053
gb|AV530843.1|AV530843 AV530843 Arabidopsis thaliana flower... 208 3e-052
gb|AA597749.1|AA597749 29333 Lambda-PRL2 Arabidopsis thalia... 207 4e-052
gb|BP855680.1|BP855680 BP855680 RAFL21 Arabidopsis thaliana... 207 5e-052
gb|BP646287.1|BP646287 BP646287 RAFL19 Arabidopsis thaliana... 147 2e-051
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 202 1e-050
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 202 1e-050
gb|BP854001.1|BP854001 BP854001 RAFL21 Arabidopsis thaliana... 202 2e-050
gb|BP570282.1|BP570282 BP570282 RAFL14 Arabidopsis thaliana... 193 2e-050
dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosom... 118 8e-050
gb|DQ056736.1| Arabidopsis thaliana putative 40S ribosomal ... 118 8e-050
ref|NM_125701.1| Arabidopsis thaliana structural constituen... 118 8e-050
gb|BP787497.1|BP787497 BP787497 RAFL7 Arabidopsis thaliana ... 197 4e-049
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 195 1e-048
gb|BP642003.1|BP642003 BP642003 RAFL19 Arabidopsis thaliana... 193 5e-048
gb|BP853164.1|BP853164 BP853164 RAFL21 Arabidopsis thaliana... 95 9e-048
gb|AA713022.1|AA713022 32584 Lambda-PRL2 Arabidopsis thalia... 191 2e-047
gb|BP853893.1|BP853893 BP853893 RAFL21 Arabidopsis thaliana... 191 2e-047
gb|BP563336.1|BP563336 BP563336 RAFL14 Arabidopsis thaliana... 191 3e-047
gb|BP597545.1|BP597545 BP597545 RAFL15 Arabidopsis thaliana... 190 6e-047
gb|BP595618.1|BP595618 BP595618 RAFL15 Arabidopsis thaliana... 189 1e-046
gb|BP789183.1|BP789183 BP789183 RAFL7 Arabidopsis thaliana ... 189 1e-046
gb|BZ292978.1|BZ292978 SALK_129050.48.35.x Arabidopsis thal... 106 2e-046
gb|BP844146.1|BP844146 BP844146 RAFL21 Arabidopsis thaliana... 188 3e-046
gb|AU226581.1|AU226581 AU226581 RAFL14 Arabidopsis thaliana... 126 4e-046
gb|R29788.1|R29788 12393 Lambda-PRL2 Arabidopsis thaliana c... 187 6e-046
gb|BP812124.1|BP812124 BP812124 RAFL19 Arabidopsis thaliana... 187 6e-046
gb|BP840222.1|BP840222 BP840222 RAFL19 Arabidopsis thaliana... 187 6e-046
emb|AJ553533.1|ATH553533 Arabidopsis thaliana T-DNA flankin... 186 8e-046
gb|BP640396.1|BP640396 BP640396 RAFL19 Arabidopsis thaliana... 112 1e-045
gb|BP799430.1|BP799430 BP799430 RAFL14 Arabidopsis thaliana... 170 1e-045
gb|BP583991.1|BP583991 BP583991 RAFL14 Arabidopsis thaliana... 184 3e-045
gb|BP638304.1|BP638304 BP638304 RAFL19 Arabidopsis thaliana... 184 3e-045
gb|AQ956828.1|AQ956828 LERAM31TF LERA Arabidopsis thaliana ... 183 7e-045
gb|BP865592.1|BP865592 BP865592 RAFL21 Arabidopsis thaliana... 183 7e-045
gb|BP566550.1|BP566550 BP566550 RAFL14 Arabidopsis thaliana... 182 1e-044
gb|BP827322.1|BP827322 BP827322 RAFL19 Arabidopsis thaliana... 119 5e-044
gb|BP849184.1|BP849184 BP849184 RAFL21 Arabidopsis thaliana... 177 6e-044
gb|N65110.1|N65110 20150 Lambda-PRL2 Arabidopsis thaliana c... 153 2e-043
gb|AQ956829.1|AQ956829 LERAM31TR LERA Arabidopsis thaliana ... 178 2e-043
gb|BP566825.1|BP566825 BP566825 RAFL14 Arabidopsis thaliana... 178 2e-043
gb|CB260534.1|CB260534 87-E9572-012-004-N21-T7R MPIZ-ADIS-0... 176 9e-043
gb|BP671919.1|BP671919 BP671919 RAFL21 Arabidopsis thaliana... 155 1e-042
gb|BP654930.1|BP654930 BP654930 RAFL19 Arabidopsis thaliana... 175 2e-042
gb|AV550232.1|AV550232 AV550232 Arabidopsis thaliana roots ... 174 3e-042
gb|BH251399.1|BH251399 SALK_011527 Arabidopsis thaliana TDN... 151 1e-041
gb|BP799546.1|BP799546 BP799546 RAFL14 Arabidopsis thaliana... 129 1e-041
gb|BP815278.1|BP815278 BP815278 RAFL19 Arabidopsis thaliana... 153 1e-041
gb|BP799355.1|BP799355 BP799355 RAFL14 Arabidopsis thaliana... 161 2e-041
gb|BP644772.1|BP644772 BP644772 RAFL19 Arabidopsis thaliana... 149 3e-041
gb|BP642920.1|BP642920 BP642920 RAFL19 Arabidopsis thaliana... 171 4e-041
gb|BP856362.1|BP856362 BP856362 RAFL21 Arabidopsis thaliana... 170 5e-041
gb|AV552702.1|AV552702 AV552702 Arabidopsis thaliana roots ... 169 1e-040
gb|BP861190.1|BP861190 BP861190 RAFL21 Arabidopsis thaliana... 168 3e-040
gb|BP815011.1|BP815011 BP815011 RAFL19 Arabidopsis thaliana... 120 3e-040
gb|BP590157.1|BP590157 BP590157 RAFL15 Arabidopsis thaliana... 98 2e-039
gb|BP663835.1|BP663835 BP663835 RAFL21 Arabidopsis thaliana... 165 2e-039
gb|AV551020.1|AV551020 AV551020 Arabidopsis thaliana roots ... 165 2e-039
gb|BP797747.1|BP797747 BP797747 RAFL14 Arabidopsis thaliana... 165 2e-039
gb|BP832293.1|BP832293 BP832293 RAFL19 Arabidopsis thaliana... 165 2e-039
gb|BP647548.1|BP647548 BP647548 RAFL19 Arabidopsis thaliana... 101 3e-039
gb|BP651032.1|BP651032 BP651032 RAFL19 Arabidopsis thaliana... 161 8e-039
gb|BP818160.1|BP818160 BP818160 RAFL19 Arabidopsis thaliana... 142 1e-038
gb|BP632732.1|BP632732 BP632732 RAFL17 Arabidopsis thaliana... 162 1e-038
gb|BP803741.1|BP803741 BP803741 RAFL14 Arabidopsis thaliana... 116 1e-038
gb|R30026.1|R30026 12631 Lambda-PRL2 Arabidopsis thaliana c... 143 2e-038
gb|BP650819.1|BP650819 BP650819 RAFL19 Arabidopsis thaliana... 161 2e-038
gb|BP644385.1|BP644385 BP644385 RAFL19 Arabidopsis thaliana... 133 3e-038
gb|AV535553.1|AV535553 AV535553 Arabidopsis thaliana flower... 160 6e-038
gb|BP592451.1|BP592451 BP592451 RAFL15 Arabidopsis thaliana... 160 6e-038
gb|BP822296.1|BP822296 BP822296 RAFL19 Arabidopsis thaliana... 159 1e-037
gb|BP855126.1|BP855126 BP855126 RAFL21 Arabidopsis thaliana... 112 2e-037
gb|BP564615.1|BP564615 BP564615 RAFL14 Arabidopsis thaliana... 158 3e-037
gb|BP644028.1|BP644028 BP644028 RAFL19 Arabidopsis thaliana... 158 3e-037
gb|BP638880.1|BP638880 BP638880 RAFL19 Arabidopsis thaliana... 157 4e-037
gb|BP844755.1|BP844755 BP844755 RAFL21 Arabidopsis thaliana... 156 7e-037
gb|AV536598.1|AV536598 AV536598 Arabidopsis thaliana liquid... 156 1e-036
gb|BP858904.1|BP858904 BP858904 RAFL21 Arabidopsis thaliana... 100 2e-036
gb|BP564344.1|BP564344 BP564344 RAFL14 Arabidopsis thaliana... 110 2e-036
gb|BP815140.1|BP815140 BP815140 RAFL19 Arabidopsis thaliana... 154 5e-036
gb|BP648711.1|BP648711 BP648711 RAFL19 Arabidopsis thaliana... 153 7e-036
gb|AV814593.1|AV814593 AV814593 RAFL9 Arabidopsis thaliana ... 153 9e-036
gb|BP805620.1|BP805620 BP805620 RAFL16 Arabidopsis thaliana... 77 1e-035
gb|AV790069.1|AV790069 AV790069 RAFL6 Arabidopsis thaliana ... 150 5e-035
gb|BP623778.1|BP623778 BP623778 RAFL17 Arabidopsis thaliana... 150 5e-035
gb|BP624306.1|BP624306 BP624306 RAFL17 Arabidopsis thaliana... 150 5e-035
gb|BP632135.1|BP632135 BP632135 RAFL17 Arabidopsis thaliana... 150 5e-035
gb|BP577470.1|BP577470 BP577470 RAFL14 Arabidopsis thaliana... 149 2e-034
gb|BP639587.1|BP639587 BP639587 RAFL19 Arabidopsis thaliana... 149 2e-034
gb|BP656135.1|BP656135 BP656135 RAFL19 Arabidopsis thaliana... 114 2e-034
gb|BP626011.1|BP626011 BP626011 RAFL17 Arabidopsis thaliana... 141 2e-034
gb|BP648892.1|BP648892 BP648892 RAFL19 Arabidopsis thaliana... 122 2e-034
gb|AV787809.1|AV787809 AV787809 RAFL6 Arabidopsis thaliana ... 145 2e-033
gb|BP630049.1|BP630049 BP630049 RAFL17 Arabidopsis thaliana... 145 2e-033
gb|BP869065.1|BP869065 BP869065 RAFL21 Arabidopsis thaliana... 144 3e-033
gb|BP657150.1|BP657150 BP657150 RAFL19 Arabidopsis thaliana... 114 4e-033
gb|BP797475.1|BP797475 BP797475 RAFL14 Arabidopsis thaliana... 105 4e-033
gb|N37263.1|N37263 18490 Lambda-PRL2 Arabidopsis thaliana c... 143 7e-033
gb|BP577273.1|BP577273 BP577273 RAFL14 Arabidopsis thaliana... 137 1e-032
gb|BP829369.1|BP829369 BP829369 RAFL19 Arabidopsis thaliana... 102 2e-032
gb|BP625067.1|BP625067 BP625067 RAFL17 Arabidopsis thaliana... 128 4e-032
gb|BP569334.1|BP569334 BP569334 RAFL14 Arabidopsis thaliana... 94 4e-032
gb|BP669875.1|BP669875 BP669875 RAFL21 Arabidopsis thaliana... 104 6e-032
gb|BP670504.1|BP670504 BP670504 RAFL21 Arabidopsis thaliana... 114 8e-032
gb|AV794154.1|AV794154 AV794154 RAFL8 Arabidopsis thaliana ... 84 2e-031
gb|BP592430.1|BP592430 BP592430 RAFL15 Arabidopsis thaliana... 55 6e-031
gb|BZ769940.1|BZ769940 SALK_142874.53.50.x Arabidopsis thal... 135 2e-030
gb|BP581489.1|BP581489 BP581489 RAFL14 Arabidopsis thaliana... 90 3e-030
gb|AV535648.1|AV535648 AV535648 Arabidopsis thaliana flower... 134 3e-030
gb|BP849172.1|BP849172 BP849172 RAFL21 Arabidopsis thaliana... 81 4e-030
gb|BP815658.1|BP815658 BP815658 RAFL19 Arabidopsis thaliana... 110 4e-030
gb|AV533902.1|AV533902 AV533902 Arabidopsis thaliana flower... 129 1e-028
gb|BP628741.1|BP628741 BP628741 RAFL17 Arabidopsis thaliana... 114 1e-028
gb|BP637705.1|BP637705 BP637705 RAFL19 Arabidopsis thaliana... 100 1e-027
gb|AV559935.1|AV559935 AV559935 Arabidopsis thaliana green ... 124 5e-027
gb|BP802394.1|BP802394 BP802394 RAFL14 Arabidopsis thaliana... 124 5e-027
gb|BP831675.1|BP831675 BP831675 RAFL19 Arabidopsis thaliana... 71 6e-027
gb|BP596175.1|BP596175 BP596175 RAFL15 Arabidopsis thaliana... 73 9e-027
emb|AL755805.1| Arabidopsis thaliana T-DNA flanking sequenc... 120 6e-026
gb|CB261315.1|CB261315 08-E9573-012-004-P02-T7R MPIZ-ADIS-0... 120 8e-026
gb|CB261515.1|CB261515 32-E020823-012-004-P02q-T7R MPIZ-ADI... 120 8e-026
gb|Z17791.1|Z17791 ATTS0365 Gif-SeedA+B Arabidopsis thalian... 120 8e-026
emb|AL755807.1| Arabidopsis thaliana T-DNA flanking sequenc... 119 1e-025
gb|BP831621.1|BP831621 BP831621 RAFL19 Arabidopsis thaliana... 92 4e-025
gb|T44160.1|T44160 7423 Lambda-PRL2 Arabidopsis thaliana cD... 117 5e-025
gb|BP826413.1|BP826413 BP826413 RAFL19 Arabidopsis thaliana... 101 8e-024
emb|CR360807.1| Arabidopsis thaliana T-DNA flanking sequenc... 111 2e-023
gb|BH214207.1|BH214207 SALK_010406 Arabidopsis thaliana TDN... 80 4e-023
ref|NM_103107.1| Arabidopsis thaliana structural constituen... 110 6e-023
gb|BZ761659.1|BZ761659 SALK_074986.53.30.x Arabidopsis thal... 89 7e-023
gb|BP802157.1|BP802157 BP802157 RAFL14 Arabidopsis thaliana... 106 9e-023
gb|CD531488.1|CD531488 10P20 Arabidopsis Leaf Senescence Li... 109 1e-022
gb|BP832815.1|BP832815 BP832815 RAFL19 Arabidopsis thaliana... 70 4e-022
emb|AL823727.1| Arabidopsis thaliana transposon insertion S... 92 6e-022
emb|CR360808.1| Arabidopsis thaliana T-DNA flanking sequenc... 105 2e-021
gb|BP585087.1|BP585087 BP585087 RAFL15 Arabidopsis thaliana... 56 2e-021
emb|AL083094.1|CNS00OE0 Arabidopsis thaliana genome survey ... 91 4e-021
>gb|BE039272.1|BE039272 AC01D03 AC Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 726
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 77 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 256
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 257 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 436
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 437 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 526
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 507 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 328
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 327 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 148
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 147 RRASRSTPLKANFLNVLF 94
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -3
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 511 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 332
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 331 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 152
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 151 VEKSIEIDSFEGEFLERSLL 92
Score = 128 bits (274), Expect(2) = 4e-029
Identities = 65/146 (44%), Positives = 88/146 (60%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 88 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 267
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 268 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 447
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL 346
A A C+PLL V+ S++ +L
Sbjct: 448 *AR*AWRWCYPLLQVHPSQVKTIQSL 525
Score = 22.6 bits (43), Expect(2) = 4e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 56 DVEPEVAAAGVPKK 97
>gb|AV826432.1|AV826432 AV826432 RAFL8 Arabidopsis thaliana cDNA clone RAFL08-15-A10 5',
mRNA sequence
Length = 630
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 108 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 287
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 288 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 467
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 468 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 557
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 538 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 359
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 358 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 179
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 178 RRASRSTPLKANFLNVLF 125
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 542 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 363
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 362 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 183
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 182 VEKSIEIDSFEGEFLERSLL 123
Score = 128 bits (274), Expect(2) = 4e-029
Identities = 65/146 (44%), Positives = 88/146 (60%)
Frame = -3 / +2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 119 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 298
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 299 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 478
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL 346
A A C+PLL V+ S++ +L
Sbjct: 479 *AR*AWRWCYPLLQVHPSQVKTIQSL 556
Score = 22.6 bits (43), Expect(2) = 4e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 87 DVEPEVAAAGVPKK 128
>gb|AV537607.1|AV537607 AV537607 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04F 3', mRNA sequence
Length = 602
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / -1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 590 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 411
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 410 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 231
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 230 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 141
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 160 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 339
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 340 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 519
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 520 RRASRSTPLKANFLNVLF 573
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / +3
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 156 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 335
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 336 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 515
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 516 VEKSIEIDSFEGEFLERSLL 575
Score = 129 bits (276), Expect = 1e-028
Identities = 68/159 (42%), Positives = 93/159 (58%)
Frame = -3 / -3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 579 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 400
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 399 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 220
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 219 *AR*AWRWCYPLLQVHPSQVKTIQSLCCALVLLDLIMQL 103
>gb|AV544220.1|AV544220 AV544220 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ36d04F 3', mRNA sequence
Length = 658
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / -3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 614 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 435
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 434 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 255
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 254 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 165
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 184 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 363
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 364 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 543
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 544 RRASRSTPLKANFLNVLF 597
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / +3
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 180 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 359
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 360 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 539
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 540 VEKSIEIDSFEGEFLERSLL 599
Score = 129 bits (276), Expect(2) = 2e-029
Identities = 68/159 (42%), Positives = 93/159 (58%)
Frame = -3 / -2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 603 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 424
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 423 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 244
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 243 *AR*AWRWCYPLLQVHPSQVKTIQSLCCALVLLDLIMQL 127
Score = 22.6 bits (43), Expect(2) = 2e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 635 DVEPEVAAAGVPKK 594
>gb|AV549585.1|AV549585 AV549585 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ09f04R 5', mRNA sequence
Length = 562
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 73 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 252
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 253 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 432
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 433 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 522
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 503 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 324
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 323 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 144
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 143 RRASRSTPLKANFLNVLF 90
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 507 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 328
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 327 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 148
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 147 VEKSIEIDSFEGEFLERSLL 88
Score = 129 bits (276), Expect(2) = 2e-029
Identities = 68/159 (42%), Positives = 93/159 (58%)
Frame = -3 / +3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 84 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 263
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 264 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 443
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 444 *AR*AWRWCYPLLQVHPSQVKTIQSLCCALVLLDLIMQL 560
Score = 22.6 bits (43), Expect(2) = 2e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 52 DVEPEVAAAGVPKK 93
>gb|AY050966.1| Arabidopsis thaliana putative ribosomal protein S15 (At5g09510)
mRNA, complete cds
Length = 1160
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 107 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 286
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 287 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 466
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 467 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 556
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 537 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 358
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 357 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 178
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 177 RRASRSTPLKANFLNVLF 124
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 541 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 362
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 361 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 182
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 181 VEKSIEIDSFEGEFLERSLL 122
Score = 129 bits (276), Expect(2) = 2e-029
Identities = 68/159 (42%), Positives = 93/159 (58%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 118 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 297
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 298 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 477
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 478 *AR*AWRWCYPLLQVHPSQVKTIQSLCCALVLLDLIMQL 594
Score = 22.6 bits (43), Expect(2) = 2e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 86 DVEPEVAAAGVPKK 127
>gb|AY096616.1| Arabidopsis thaliana putative ribosomal protein S15 (AT5g09510)
mRNA, complete cds
Length = 490
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 28 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 207
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 208 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 387
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 388 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 477
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 458 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 279
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 278 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 99
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 98 RRASRSTPLKANFLNVLF 45
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 462 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 283
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 282 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 103
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 102 VEKSIEIDSFEGEFLERSLL 43
Score = 128 bits (274), Expect(2) = 4e-029
Identities = 65/146 (44%), Positives = 88/146 (60%)
Frame = -3 / +3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 39 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 218
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 219 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 398
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL 346
A A C+PLL V+ S++ +L
Sbjct: 399 *AR*AWRWCYPLLQVHPSQVKTIQSL 476
Score = 22.6 bits (43), Expect(2) = 4e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 7 DVEPEVAAAGVPKK 48
>gb|AY085630.1| Arabidopsis thaliana clone 164 mRNA, complete sequence
Length = 753
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 147 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 326
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 327 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 506
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 507 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 596
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 577 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 398
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 397 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 218
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 217 RRASRSTPLKANFLNVLF 164
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 581 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 402
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 401 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 222
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 221 VEKSIEIDSFEGEFLERSLL 162
Score = 129 bits (276), Expect(2) = 2e-029
Identities = 68/159 (42%), Positives = 93/159 (58%)
Frame = -3 / +2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 158 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 337
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 338 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 517
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 518 *AR*AWRWCYPLLQVHPSQVKTIQSLCCALVLLDLIMQL 634
Score = 22.6 bits (43), Expect(2) = 2e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 126 DVEPEVAAAGVPKK 167
>ref|NM_120988.2| Arabidopsis thaliana structural constituent of ribosome AT5G09510
mRNA, complete cds
Length = 1163
Score = 316 bits (684), Expect = 7e-085
Identities = 129/150 (86%), Positives = 142/150 (94%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 147 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 326
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 327 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 506
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 507 YKPVKHGRPGVGATHSSRFIPLK*RPYRVC 596
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 577 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 398
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 397 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 218
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 217 RRASRSTPLKANFLNVLF 164
Score = 158 bits (340), Expect = 2e-037
Identities = 68/140 (48%), Positives = 94/140 (67%)
Frame = +3 / -1
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 581 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 402
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 401 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 222
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 221 VEKSIEIDSFEGEFLERSLL 162
Score = 129 bits (276), Expect(2) = 2e-029
Identities = 68/159 (42%), Positives = 93/159 (58%)
Frame = -3 / +2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 158 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 337
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 338 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 517
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 518 *AR*AWRWCYPLLQVHPSQVKTIQSLCCALVLLDLIMQL 634
Score = 22.6 bits (43), Expect(2) = 2e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 126 DVEPEVAAAGVPKK 167
>gb|AV553671.1|AV553671 AV553671 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ69c07R 5', mRNA sequence
Length = 544
Score = 314 bits (681), Expect = 2e-084
Identities = 128/150 (85%), Positives = 142/150 (94%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 89 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 268
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 269 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 448
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHGRPG+GATHSS+FIPLK* R+C
Sbjct: 449 YKPVKHGRPGVGATHSSKFIPLK*RPYRVC 538
Score = 204 bits (440), Expect = 3e-051
Identities = 94/138 (68%), Positives = 98/138 (71%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 519 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 340
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 339 TMIMFLKWVLTGSGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMS 160
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 159 RRASRSTPLKANFLNVLF 106
Score = 154 bits (330), Expect = 5e-036
Identities = 67/140 (47%), Positives = 93/140 (66%)
Frame = +3 / -1
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++ GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 523 SSLERDELGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 344
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 343 RHNDHVPQVGSHWFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 164
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 163 VEKSIEIDSFEGEFLERSLL 104
Score = 128 bits (274), Expect(2) = 4e-029
Identities = 65/146 (44%), Positives = 88/146 (60%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 100 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 279
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 280 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKDFQPSGDQA*DDWTLPCRVLHLVQAS 459
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL 346
A A C+PLL V+ S++ +L
Sbjct: 460 *AR*AWRWCYPLLQVHPSQVKTIQSL 537
Score = 22.6 bits (43), Expect(2) = 4e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 68 DVEPEVAAAGVPKK 109
>gb|AV784120.1|AV784120 AV784120 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 3',
mRNA sequence
Length = 683
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / -1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 611 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 432
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 431 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 252
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 251 YKPVKHGRPGVGATHSSRFIPLK* 180
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 181 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 360
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 361 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 540
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 541 RRASRSTPLKANFLNVLFL 597
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / +3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 180 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 359
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 360 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 539
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 540 EKSIEINSFEGKLLKRPLLGNSSSS 614
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -3
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 471 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 292
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 291 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 190
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 600 SQEEDV*EVCLQRS*SRCSSRYVY 529
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -1
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 632 DVEPEVAAAGVPKK 591
>gb|AV823191.1|AV823191 AV823191 RAFL5 Arabidopsis thaliana cDNA clone RAFL05-16-H14 5',
mRNA sequence
Length = 649
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 120 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 299
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 300 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 479
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 480 YKPVKHGRPGVGATHSSRFIPLK* 551
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 550 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 371
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 370 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 191
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 190 RRASRSTPLKANFLNVLFL 134
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 551 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 372
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 371 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 192
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 191 EKSIEINSFEGKLLKRPLLGNSSSS 117
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +2
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 260 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 439
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 440 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 541
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 131 SQEEDV*EVCLQRS*SRCSSRYVY 202
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 99 DVEPEVAAAGVPKK 140
>gb|CA781266.1|CA781266 014B04AF Infected Arabidopsis Leaf Arabidopsis thaliana cDNA, mRNA
sequence
Length = 665
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 68 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 247
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 248 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 427
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 428 YKPVKHGRPGVGATHSSRFIPLK* 499
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 498 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 319
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 318 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 139
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 138 RRASRSTPLKANFLNVLFL 82
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -2
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 499 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 320
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 319 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 140
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 139 EKSIEINSFEGKLLKRPLLGNSSSS 65
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 208 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 387
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 388 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 489
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 79 SQEEDV*EVCLQRS*SRCSSRYVY 150
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 47 DVEPEVAAAGVPKK 88
>gb|AV544758.1|AV544758 AV544758 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02F 3', mRNA sequence
Length = 651
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / -2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 608 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 429
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 428 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 249
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 248 YKPVKHGRPGVGATHSSRFIPLK* 177
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 178 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 357
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 358 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 537
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 538 RRASRSTPLKANFLNVLFL 594
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / +3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 177 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 356
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 357 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 536
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 537 EKSIEINSFEGKLLKRPLLGNSSSS 611
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 468 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 289
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 288 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 187
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / -1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 597 SQEEDV*EVCLQRS*SRCSSRYVY 526
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 629 DVEPEVAAAGVPKK 588
>gb|AV553255.1|AV553255 AV553255 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ58c02R 5', mRNA sequence
Length = 575
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 88 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 267
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 268 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 447
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 448 YKPVKHGRPGVGATHSSRFIPLK* 519
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 518 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 339
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 338 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 159
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 158 RRASRSTPLKANFLNVLFL 102
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 519 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 340
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 339 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 160
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 159 EKSIEINSFEGKLLKRPLLGNSSSS 85
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +3
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 228 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 407
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 408 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 509
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 99 SQEEDV*EVCLQRS*SRCSSRYVY 170
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 67 DVEPEVAAAGVPKK 108
>gb|AY048221.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 729
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 299 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 478
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 479 YKPVKHGRPGVGATHSSRFIPLK* 550
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 549 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 370
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 369 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 190
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 189 RRASRSTPLKANFLNVLFL 133
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 550 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 371
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 370 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 191
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 190 EKSIEINSFEGKLLKRPLLGNSSSS 116
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 259 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 438
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 439 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 540
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 130 SQEEDV*EVCLQRS*SRCSSRYVY 201
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>gb|AY091703.1| Arabidopsis thaliana At1g04270/F19P19_29 mRNA, complete cds
Length = 459
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 28 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 207
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 208 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 387
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 388 YKPVKHGRPGVGATHSSRFIPLK* 459
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 458 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 279
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 278 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 99
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 98 RRASRSTPLKANFLNVLFL 42
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 459 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 280
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 279 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 100
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 99 EKSIEINSFEGKLLKRPLLGNSSSS 25
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +3
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 168 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 347
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 348 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 449
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 39 SQEEDV*EVCLQRS*SRCSSRYVY 110
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 7 DVEPEVAAAGVPKK 48
>emb|BX817406.1|CNS0ACK0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL20ZD06 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 695
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 443 YKPVKHGRPGVGATHSSRFIPLK* 514
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 513 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 334
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 333 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 154
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 153 RRASRSTPLKANFLNVLFL 97
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -2
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 514 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 335
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 334 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 155
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 154 EKSIEINSFEGKLLKRPLLGNSSSS 80
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 223 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 402
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 403 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 504
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 94 SQEEDV*EVCLQRS*SRCSSRYVY 165
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>emb|Z23161.1|ATRBPS15A A.thaliana ribosomal protein S15 mRNA, complete CDS
Length = 668
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 57 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 236
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 237 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 416
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 417 YKPVKHGRPGVGATHSSRFIPLK* 488
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 487 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 308
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 307 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 128
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 127 RRASRSTPLKANFLNVLFL 71
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 488 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 309
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 308 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 129
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 128 EKSIEINSFEGKLLKRPLLGNSSSS 54
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +2
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 197 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 376
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 377 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 478
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 68 SQEEDV*EVCLQRS*SRCSSRYVY 139
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 36 DVEPEVAAAGVPKK 77
>ref|NM_100308.2| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.1 mRNA, complete cds
Length = 798
Score = 309 bits (669), Expect = 9e-083
Identities = 126/144 (87%), Positives = 138/144 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 299 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 478
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 479 YKPVKHGRPGVGATHSSRFIPLK* 550
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 549 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 370
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 369 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 190
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 189 RRASRSTPLKANFLNVLFL 133
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 550 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 371
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 370 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 191
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 190 EKSIEINSFEGKLLKRPLLGNSSSS 116
Score = 108 bits (231), Expect(3) = 5e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 259 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 438
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 439 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 540
Score = 26.7 bits (52), Expect(3) = 5e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 130 SQEEDV*EVCLQRS*SRCSSRYVY 201
Score = 22.6 bits (43), Expect(3) = 5e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>emb|X91962.1|AT40SRS15 A.thaliana mRNA for 40S ribosomal protein S15
Length = 694
Score = 308 bits (666), Expect = 2e-082
Identities = 125/144 (86%), Positives = 138/144 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 89 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 268
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMII+PEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 269 AKREAPQGEKPEPVRTHLRNMIILPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 448
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 449 YKPVKHGRPGVGATHSSRFIPLK* 520
Score = 196 bits (423), Expect = 7e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL*TP MLPIISG
Sbjct: 519 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPL*TPMMLPIISG 340
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
MIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 339 RMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 160
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 159 RRASRSTPLKANFLNVLFL 103
Score = 164 bits (353), Expect = 3e-039
Identities = 70/142 (49%), Positives = 98/142 (69%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV+ N+A+NH R
Sbjct: 520 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVNTNDAANHFR 341
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
++DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 340 EDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSSNTRREELDKIISRHI 161
Query: 723 EKRI*VDAAVAVLAERPLLGSA 788
EK I +++ L +RPLLG++
Sbjct: 160 EKSIEINSFEGKLLKRPLLGNS 95
Score = 124 bits (266), Expect(2) = 4e-028
Identities = 67/137 (48%), Positives = 89/137 (64%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
SQEEDV +V L RC+SR+V+ AL + +KV ++EA+G+ EA + EKG
Sbjct: 100 SQEEDV*EVCLQRS*SRCSSRYVY**SCQALLFSYSKKVL*RFDKEANGSD*EAEESEKG 279
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ *E R S++ HDH P*+DW+H W LQR+D QPG*DQA*DD LP *VL+L+ AG
Sbjct: 280 GTTR*EARTSENPLEEHDHPP*NDWQHHWCLQRKDFQPG*DQA*DDWSLPG*VLYLIQAG 459
Query: 423 QAWQARYRCHPLLAVYS 373
QA A C+PL ++S
Sbjct: 460 QAR*AWCWCYPLFQIHS 510
Score = 22.6 bits (43), Expect(2) = 4e-028
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 68 DVEPEVAAAGVPKK 109
>gb|BE037545.1|BE037545 AA01A06 AA Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 758
Score = 307 bits (665), Expect = 3e-082
Identities = 125/144 (86%), Positives = 137/144 (95%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 123 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 302
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 303 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 482
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHS RFIPLK*
Sbjct: 483 YKPVKHGRPGVGATHSXRFIPLK* 554
Score = 194 bits (418), Expect = 4e-048
Identities = 90/139 (64%), Positives = 96/139 (69%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 553 HLRGMNLXEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 374
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 373 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 194
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 193 RRASRSTPLKANFLNVLFL 137
Score = 167 bits (360), Expect = 4e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 554 SLKGNESXRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 375
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 374 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 195
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 194 EKSIEINSFEGKLLKRPLLGNSSSS 120
Score = 108 bits (230), Expect(3) = 7e-026
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +2
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 263 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 442
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 443 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLXQIHS 544
Score = 26.7 bits (52), Expect(3) = 7e-026
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +2
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 134 SQEEDV*EVCLQRS*SRCSSRYVY 205
Score = 22.6 bits (43), Expect(3) = 7e-026
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 102 DVEPEVAAAGVPKK 143
>gb|BE038613.1|BE038613 AB01H05 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 709
Score = 307 bits (665), Expect = 3e-082
Identities = 126/144 (87%), Positives = 137/144 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K +++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKLAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 443 YKPVKHGRPGVGATHSSRFIPLK* 514
Score = 197 bits (424), Expect = 5e-049
Identities = 91/139 (65%), Positives = 97/139 (69%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 513 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 334
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 333 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 154
Query: 724 XXXXXXTPR*LYLRNVLFL 780
TP NVLFL
Sbjct: 153 RRASRSTPLKASFLNVLFL 97
Score = 167 bits (359), Expect = 5e-040
Identities = 72/145 (49%), Positives = 98/145 (67%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 514 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 335
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 334 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 155
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EK I +++ L +RPLLG++ +
Sbjct: 154 EKSIEINSFEGKLLKRPLLGNSSSS 80
Score = 108 bits (231), Expect(3) = 2e-025
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / +1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 223 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 402
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 403 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 504
Score = 24.9 bits (48), Expect(3) = 2e-025
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV + L RC+SR+V+
Sbjct: 94 SQEEDV*EACLQRS*SRCSSRYVY 165
Score = 22.6 bits (43), Expect(3) = 2e-025
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>gb|BE038861.1|BE038861 AB05B09 AB Arabidopsis thaliana cDNA 5' similar to ribosomal
protein s15, mRNA sequence
Length = 725
Score = 307 bits (665), Expect = 3e-082
Identities = 125/150 (83%), Positives = 139/150 (92%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 97 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 276
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++APAGEKP+P +THLRNMIIVPEMIGSI+GVYNGKT NQVEIKPEMIGHYLAEFSIS
Sbjct: 277 AKREAPAGEKPDPARTHLRNMIIVPEMIGSIIGVYNGKTLNQVEIKPEMIGHYLAEFSIS 456
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
YKPVKHG PG+GATHSSRFIPLK* R+C
Sbjct: 457 YKPVKHGTPGVGATHSSRFIPLK*RPYRVC 546
Score = 199 bits (429), Expect = 1e-049
Identities = 93/149 (62%), Positives = 100/149 (67%)
Frame = +1 / -1
Query: 331 TLGRLQSRVTAHFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL 510
T Q+ H RG+N EEWVAP PG+PCLTGL EMENSAR* PIISGLISTWL+V PL
Sbjct: 560 TKSSTQTLYGLHLRGMNLEEWVAPTPGVPCLTGLYEMENSAR*CPIISGLISTWLRVFPL 381
Query: 511 *TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAG 690
TP MLPIISGTMIM + VL GSGFSPAGAS FALRSFL+ A+GFL PL NLL R
Sbjct: 380 YTPMMLPIISGTMIMFLKWVLAGSGFSPAGASLFALRSFLIRAIGFLVNPLENLLRIREE 201
Query: 691 KSWTXXXXXXXXXXXXXTPR*LYLRNVLF 777
KS T TP NVLF
Sbjct: 200 KSLTRSSVDMSRRASRSTPLKANFLNVLF 114
Score = 155 bits (332), Expect = 3e-036
Identities = 67/140 (47%), Positives = 94/140 (67%)
Frame = +3 / -3
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 531 SSLERDEPGGVGSTNARRTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 352
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W+W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 351 RHNDHVPQVGSRWIWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 172
Query: 720 VEKRI*VDAAVAVLAERPLL 779
VEK I +D+ ER LL
Sbjct: 171 VEKSIEIDSFEGEFLERSLL 112
Score = 131 bits (280), Expect(2) = 5e-030
Identities = 68/159 (42%), Positives = 95/159 (59%)
Frame = -3 / +3
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G+ E QGEK
Sbjct: 108 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGSD*ETPQGEKR 287
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AG 424
+ W*E R+S++ HDHC *+DWKH W +Q +D QP DQA*DD LPC VLHL+ A
Sbjct: 288 GTSW*EARSSENPLEEHDHCA*NDWKHHWCVQWKDSQPSGDQA*DDWTLPCRVLHLVQAS 467
Query: 423 QAWQARYRCHPLLAVYSSEMSCYPAL*SPKSQLAMFVQL 307
A A C+PLL V+ S++ +L L + +QL
Sbjct: 468 *ARYAWRWCYPLLQVHPSQVKTIQSLC*ALGLLDLIMQL 584
Score = 22.6 bits (43), Expect(2) = 5e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +1
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 76 DVEPEVAAAGVPKK 117
>ref|NM_120987.2| Arabidopsis thaliana structural constituent of ribosome AT5G09500
mRNA, complete cds
Length = 652
Score = 303 bits (656), Expect = 5e-081
Identities = 127/151 (84%), Positives = 139/151 (92%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 90 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 269
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 270 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 449
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRLCS 342
YKPVKHGRPG+GAT+SSRFIPLK* + L S
Sbjct: 450 YKPVKHGRPGVGATNSSRFIPLK*IIKLLWS 542
Score = 196 bits (423), Expect = 7e-049
Identities = 92/149 (61%), Positives = 101/149 (67%)
Frame = +1 / -1
Query: 331 TLGRLQSRVTAHFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL 510
++ +L + H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL
Sbjct: 553 SITKLHKSLIIHLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL 374
Query: 511 *TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAG 690
*TP LPIISGTMIM R VLT +GFSPAGAS FA RSFL+ A+GFL PL NLL R G
Sbjct: 373 *TPMTLPIISGTMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREG 194
Query: 691 KSWTXXXXXXXXXXXXXTPR*LYLRNVLF 777
KS T TP NVLF
Sbjct: 193 KSLTRSSVDMSRRASRSTPLKENFLNVLF 107
Score = 137 bits (294), Expect = 5e-031
Identities = 63/146 (43%), Positives = 94/146 (64%)
Frame = +3 / -3
Query: 339 ETTEPGNSSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDP 518
+T + + S +R+K G+G T+T P ML+RLI D +LS+V+++HL DL+LV+ L++V+
Sbjct: 545 KTPQELDYSLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNT 366
Query: 519 NNASNHLRDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEEL 698
++ASNH R NDHV + W L+S FR Q LD+ H LP Q+ EPS E+L
Sbjct: 365 DDASNHFRHNDHVP*VGSHCCWLLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKL 186
Query: 699 DEVVRGHVEKRI*VDAAVAVLAERPL 776
D+++ HVEK I +D++ L ER L
Sbjct: 185 DKIISRHVEKSIKIDSSEGKLFERSL 108
>gb|AU235816.1|AU235816 AU235816 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-46-M02 5',
mRNA sequence
Length = 597
Score = 302 bits (654), Expect = 1e-080
Identities = 126/149 (84%), Positives = 138/149 (92%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 91 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 270
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 271 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 450
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*AVTRL 348
YKPVKHGRPG+GAT+SSRFIPLK* + L
Sbjct: 451 YKPVKHGRPGVGATNSSRFIPLK*IIKLL 537
Score = 194 bits (419), Expect = 3e-048
Identities = 92/145 (63%), Positives = 98/145 (67%)
Frame = +1 / -2
Query: 343 LQSRVTAHFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPT 522
L + H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP
Sbjct: 542 LXKSLIIHLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPM 363
Query: 523 MLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 702
LPIISGTMIM R VLT +GFSPAGAS FA RSFL+ A+GFL PL NLL R GKS T
Sbjct: 362 TLPIISGTMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLT 183
Query: 703 XXXXXXXXXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 182 RSSVDMSRRASRSTPLKENFLNVLF 108
Score = 137 bits (293), Expect = 6e-031
Identities = 62/138 (44%), Positives = 90/138 (65%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S +R+K G+G T+T P ML+RLI D +LS+V+++HL DL+LV+ L++V+ ++ASNH R
Sbjct: 522 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 343
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
NDHV + W L+S FR Q LD+ H LP Q+ EPS E+LD+++ HV
Sbjct: 342 HNDHVP*VGSHCCWLLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHV 163
Query: 723 EKRI*VDAAVAVLAERPL 776
EK I +D++ L ER L
Sbjct: 162 EKSIKIDSSEGKLFERSL 109
>gb|BT010135.1| Arabidopsis thaliana At5g09500 gene, complete cds
Length = 453
Score = 301 bits (651), Expect = 3e-080
Identities = 125/144 (86%), Positives = 136/144 (94%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRRF RGL RKPMALIKKLRK
Sbjct: 22 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRK 201
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 202 AKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 381
Query: 434 YKPVKHGRPGIGATHSSRFIPLK* 363
YKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 382 YKPVKHGRPGVGATNSSRFIPLK* 453
Score = 194 bits (418), Expect = 4e-048
Identities = 91/138 (65%), Positives = 96/138 (69%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL*TP LPIISG
Sbjct: 452 HLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL*TPMTLPIISG 273
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM R VLT +GFSPAGAS FA RSFL+ A+GFL PL NLL R GKS T
Sbjct: 272 TMIMFLRWVLTAAGFSPAGASIFAFRSFLIKAIGFLVNPLENLLRIREGKSLTRSSVDMS 93
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 92 RRASRSTPLKENFLNVLF 39
Score = 137 bits (293), Expect = 6e-031
Identities = 62/138 (44%), Positives = 90/138 (65%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S +R+K G+G T+T P ML+RLI D +LS+V+++HL DL+LV+ L++V+ ++ASNH R
Sbjct: 453 SLERDKSGGIGSTNTRPTMLNRLI*D*KLSQVMSNHLWFDLDLVKSLSIVNTDDASNHFR 274
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
NDHV + W L+S FR Q LD+ H LP Q+ EPS E+LD+++ HV
Sbjct: 273 HNDHVP*VGSHCCWLLSSWCFNFRFPQFLDQSHRLPRQSSREPSTDTGREKLDKIISRHV 94
Query: 723 EKRI*VDAAVAVLAERPL 776
EK I +D++ L ER L
Sbjct: 93 EKSIKIDSSEGKLFERSL 40
>gb|AV538711.1|AV538711 AV538711 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ120a09F 3', mRNA sequence
Length = 597
Score = 299 bits (648), Expect = 7e-080
Identities = 122/139 (87%), Positives = 134/139 (96%)
Frame = -1 / -1
Query: 779 KKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDA 600
KKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++A
Sbjct: 597 KKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREA 418
Query: 599 PAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK 420
P GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK
Sbjct: 417 PQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVK 238
Query: 419 HGRPGIGATHSSRFIPLK* 363
HGRPG+GATHSSRFIPLK*
Sbjct: 237 HGRPGVGATHSSRFIPLK* 181
Score = 195 bits (420), Expect = 2e-048
Identities = 90/138 (65%), Positives = 96/138 (69%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 182 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 361
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 362 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDIS 541
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 542 RRASRSTPLKANFLNVLF 595
Score = 163 bits (350), Expect = 9e-039
Identities = 71/139 (51%), Positives = 94/139 (67%)
Frame = +3 / +1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 181 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 360
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 361 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 540
Query: 723 EKRI*VDAAVAVLAERPLL 779
EK I +++ L +RPLL
Sbjct: 541 EKSIEINSFEGKLLKRPLL 597
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -3
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 472 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 293
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 292 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 191
Score = 22.6 bits (43), Expect(2) = 3e-023
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 777 EEDVPQVQLXXXXXRCASRHVH 712
EEDV +V L RC+SR+V+
Sbjct: 595 EEDV*EVCLQRS*SRCSSRYVY 530
>gb|AV538084.1|AV538084 AV538084 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ11b11F 3', mRNA sequence
Length = 620
Score = 295 bits (638), Expect = 2e-078
Identities = 119/138 (86%), Positives = 132/138 (95%)
Frame = -1 / -2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 613 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 434
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 433 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 254
Query: 434 YKPVKHGRPGIGATHSSR 381
YKPVKHGRPG+GATHSS+
Sbjct: 253 YKPVKHGRPGVGATHSSQ 200
Score = 186 bits (400), Expect = 1e-045
Identities = 87/132 (65%), Positives = 92/132 (69%)
Frame = +1 / +3
Query: 385 EEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRR 564
EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISGTMIM +
Sbjct: 204 EEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISGTMIMFLK 383
Query: 565 CVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXXT 744
VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T T
Sbjct: 384 WVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRST 563
Query: 745 PR*LYLRNVLFL 780
P NVLFL
Sbjct: 564 PLKANFLNVLFL 599
Score = 167 bits (360), Expect = 4e-040
Identities = 72/142 (50%), Positives = 97/142 (68%)
Frame = +3 / +2
Query: 372 RNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLRDND 551
R+ R VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH RD+D
Sbjct: 191 RSSLRRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDD 370
Query: 552 HVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHVEKR 731
HV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+EK
Sbjct: 371 HVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKS 550
Query: 732 I*VDAAVAVLAERPLLGSAGGN 797
I +++ L +RPLLG++ +
Sbjct: 551 IEINSFEGKLLKRPLLGNSSSS 616
Score = 105 bits (224), Expect(2) = 1e-023
Identities = 49/91 (53%), Positives = 64/91 (70%)
Frame = -3 / -1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 473 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 294
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLA 382
*DD LP *VL+L+ AGQA A C+PL +
Sbjct: 293 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFS 201
Score = 104 bits (221), Expect = 5e-021
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1 / -3
Query: 494 NQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
N VEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 189 NLVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 58
Score = 26.7 bits (52), Expect(2) = 1e-023
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / -1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 602 SQEEDV*EVCLQRS*SRCSSRYVY 531
>ref|NM_123730.1| Arabidopsis thaliana structural constituent of ribosome AT5G43640
mRNA, complete cds
Length = 450
Score = 292 bits (633), Expect = 8e-078
Identities = 123/145 (84%), Positives = 134/145 (92%)
Frame = -1 / +1
Query: 797 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLR 618
VAAG KKRTF+K+S+RGVDLDALLDMS +DLV+ F +R RRRF RGL RKPMALIKKLR
Sbjct: 16 VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLR 195
Query: 617 KAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSI 438
KAK +APAGEKP V+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSI
Sbjct: 196 KAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSI 375
Query: 437 SYKPVKHGRPGIGATHSSRFIPLK* 363
SYKPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 376 SYKPVKHGRPGVGATNSSRFIPLK* 450
Score = 187 bits (403), Expect = 4e-046
Identities = 87/138 (63%), Positives = 94/138 (68%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RGIN EE VAP PGLPC TGL E+ENSA+* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 449 HLRGINLEELVAPTPGLPCFTGLYEIENSAK*CPIISGLISTWLKVFPLYTPMMLPIISG 270
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
TMIM +CVLT +GFSPAGAS FALR+FL+ A+GFL PL NLL R K T
Sbjct: 269 TMIMFLKCVLTDAGFSPAGASIFALRNFLIKAIGFLVNPLENLLRIRELKCLTRSSMDMS 90
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP VLF
Sbjct: 89 RSASRSTPLKENFLKVLF 36
Score = 145 bits (311), Expect = 2e-033
Identities = 65/145 (44%), Positives = 93/145 (64%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S +R+KP G+G T+T P +L R + D ELS+V+++HLRLDL+LV+ L+VV N+ASNH R
Sbjct: 450 SLERDKPGGIGSTNTRPTVLYRFV*D*ELSQVMSNHLRLDLDLVKSLSVVHTNDASNHFR 271
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
NDHV ++C W LTS + FR AQ L++ H Q+ +PS E D++ GHV
Sbjct: 270 HNDHVPQVCSH*CWLLTSWCLHFRFAQFLNQSHRFSGQSSRKPSANTGTEMFDKIFDGHV 91
Query: 723 EKRI*VDAAVAVLAERPLLGSAGGN 797
EKRI +D++ L E L ++ N
Sbjct: 90 EKRIEIDSSERKLFEGSLFHNSSRN 16
Score = 107 bits (229), Expect = 4e-022
Identities = 56/139 (40%), Positives = 78/139 (56%)
Frame = -3 / +3
Query: 780 QEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKGC 601
++E++ +V RCASRHVH R +KV +++ +G E AQ E G
Sbjct: 33 EKENLQKVFFQRSRSRCASRHVHRRSCQTFQFPYSQKVF*RIDQKTYGFD*EIAQSENGG 212
Query: 600 SCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AGQ 421
+ W*E S++T HDHC *+DWKH W +QR+D P DQA DD L *VL+L+ G+
Sbjct: 213 TSW*EASISENTLEEHDHCA*NDWKHHWCVQRKDF*PSRDQAGDDWTLLG*VLNLIQTGK 392
Query: 420 AWQARYRCHPLLAVYSSEM 364
A A C+ L VY S++
Sbjct: 393 AR*AWCWCYQFLQVYPSQV 449
>gb|AY086958.1| Arabidopsis thaliana clone 29963 mRNA, complete sequence
Length = 682
Score = 292 bits (632), Expect = 1e-077
Identities = 119/145 (82%), Positives = 134/145 (92%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRR RGL RKPMALIKKLRK
Sbjct: 90 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRK 269
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK DAPAGEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+
Sbjct: 270 AKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSIT 449
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*A 360
YKPV+HG+PG GATHSSRFIPLK*+
Sbjct: 450 YKPVRHGKPGHGATHSSRFIPLK*S 524
Score = 184 bits (396), Expect = 4e-045
Identities = 90/138 (65%), Positives = 94/138 (68%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 520 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPIMLPIISG 341
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
+ M R VLT SGFSPAGAS FALR+FLM A+GFL PL LLL R GKS T
Sbjct: 340 IITMFLRWVLTTSGFSPAGASSFALRNFLMRAIGFLVNPLLILLLIREGKSSTRSSVGMS 161
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 160 RRASRSTPLKENFLNVLF 107
Score = 137 bits (293), Expect = 6e-031
Identities = 66/140 (47%), Positives = 87/140 (62%)
Frame = +3 / -3
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
+S +R+KPRGV T TG A+ + + D E KV+++HLR DL+LV+ L++V NNASNH
Sbjct: 524 ASLERDKPRGVCSTMTGLAVPNGFVSD*EFRKVMSNHLRFDLDLVKSLSIVHTNNASNHF 345
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R N HV M + LTS I FR AQ LDE H LP + PS EELD+++ GH
Sbjct: 344 RHNHHVP*MGSHYFGLLTSWCI*FRFAQFLDESHRLPR*SSTHPSSYTGREELDKIISGH 165
Query: 720 VEKRI*VDAAVAVLAERPLL 779
V+K I +D+ L ER LL
Sbjct: 164 VKKSIEIDSFEGKLFERSLL 105
Score = 114 bits (243), Expect = 5e-024
Identities = 60/139 (43%), Positives = 80/139 (57%)
Frame = -3 / +2
Query: 780 QEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKGC 601
+EE+V +V L RC+S H H ALP ++K EEA+G+HQE AQ E C
Sbjct: 104 EEENVQKVFLQRSRSRCSS*HAH**SCRALPFPYKKKDE*RINEEAYGSHQEIAQSETRC 283
Query: 600 SCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AGQ 421
+ W*E R+S++ S H *+DWKH W +Q +D P DQ DD LPC +L+ L
Sbjct: 284 TSW*EARSSENPSKEHGDYA*NDWKHYWCVQWKDF*PNRDQTGDDWTLPCGILNHLQTR* 463
Query: 420 AWQARYRCHPLLAVYSSEM 364
A QAR C+ LL VY S++
Sbjct: 464 ARQARSWCYTLL*VYPSQV 520
>ref|NM_120986.2| Arabidopsis thaliana structural constituent of ribosome AT5G09490
mRNA, complete cds
Length = 681
Score = 292 bits (632), Expect = 1e-077
Identities = 119/145 (82%), Positives = 134/145 (92%)
Frame = -1 / +3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRR RGL RKPMALIKKLRK
Sbjct: 90 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRK 269
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK DAPAGEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+
Sbjct: 270 AKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSIT 449
Query: 434 YKPVKHGRPGIGATHSSRFIPLK*A 360
YKPV+HG+PG GATHSSRFIPLK*+
Sbjct: 450 YKPVRHGKPGHGATHSSRFIPLK*S 524
Score = 184 bits (396), Expect = 4e-045
Identities = 90/138 (65%), Positives = 94/138 (68%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 520 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPMMLPIISG 341
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXX 723
+ M R VLT SGFSPAGAS FALR+FLM A+GFL PL LLL R GKS T
Sbjct: 340 IITMFLRWVLTTSGFSPAGASSFALRNFLMRAIGFLVNPLLILLLIREGKSSTRSSVGMS 161
Query: 724 XXXXXXTPR*LYLRNVLF 777
TP NVLF
Sbjct: 160 RRASRSTPLKENFLNVLF 107
Score = 134 bits (288), Expect = 3e-030
Identities = 65/140 (46%), Positives = 87/140 (62%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
+S +R+KPRGV T TG A+ + + D E KV+++HLR DL+LV+ L++V N+ASNH
Sbjct: 524 ASLERDKPRGVCSTMTGLAVPNGFVSD*EFRKVMSNHLRFDLDLVKSLSIVHTNDASNHF 345
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R N HV M + LTS I FR AQ LDE H LP + PS EELD+++ GH
Sbjct: 344 RHNHHVP*MGSHYFGLLTSWCI*FRFAQFLDESHRLPR*SSTHPSSYTGREELDKIISGH 165
Query: 720 VEKRI*VDAAVAVLAERPLL 779
V+K I +D+ L ER LL
Sbjct: 164 VKKSIEIDSFEGKLFERSLL 105
Score = 113 bits (242), Expect = 7e-024
Identities = 60/139 (43%), Positives = 80/139 (57%)
Frame = -3 / +2
Query: 780 QEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKGC 601
+EE+V +V L RC+S H H ALP ++K EEA+G+HQE AQ E C
Sbjct: 104 EEENVQKVFLQRSRSRCSS*HAH**SCRALPFPYKKKDE*RINEEAYGSHQEIAQSETRC 283
Query: 600 SCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AGQ 421
+ W*E R+S++ S H *+DWKH W +Q +D P DQ DD LPC +L+ L
Sbjct: 284 TSW*EARSSENPSKEHGDYA*NDWKHHWCVQWKDF*PNRDQTGDDWTLPCGILNHLQTR* 463
Query: 420 AWQARYRCHPLLAVYSSEM 364
A QAR C+ LL VY S++
Sbjct: 464 ARQARSWCYTLL*VYPSQV 520
>ref|NM_001035879.1| Arabidopsis thaliana RPS15 (RIBOSOMAL PROTEIN S15); structural
constituent of ribosome AT1G04270 (RPS15) transcript
variant AT1G04270.2 mRNA, complete cds
Length = 795
Score = 194 bits (418), Expect(2) = 2e-077
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = -1 / +2
Query: 626 KLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAE 447
K + K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAE
Sbjct: 284 KKLRKKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAE 463
Query: 446 FSISYKPVKHGRPGIGATHSSRFIPLK* 363
FSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 464 FSISYKPVKHGRPGVGATHSSRFIPLK* 547
Score = 157 bits (337), Expect(2) = 6e-050
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 546 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 367
Query: 544 TMIMLRRCVLTGSGFSPAGASFFAL 618
TMIM + VLTGSGFSP GAS F L
Sbjct: 366 TMIMFLKWVLTGSGFSPCGASLFFL 292
Score = 117 bits (251), Expect(2) = 2e-077
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 119 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 298
Query: 614 AKK 606
++
Sbjct: 299 KRE 307
Score = 105 bits (224), Expect(2) = 2e-028
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 547 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 368
Query: 543 DNDHVTEMCLDWLWFLT 593
D+DHV ++ W W LT
Sbjct: 367 DDDHVPQVGSHWFWLLT 317
Score = 97.3 bits (206), Expect(3) = 1e-022
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = -3 / +1
Query: 621 AQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VL 442
A+ +KG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA*DD LP *VL
Sbjct: 289 AEEKKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VL 468
Query: 441 HLL*AGQAWQARYRCHPLLAVYS 373
+L+ AGQA A C+PL ++S
Sbjct: 469 YLIQAGQAR*AWCWCYPLFQIHS 537
Score = 63.4 bits (132), Expect(2) = 6e-050
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3 / -3
Query: 621 QLLDECHGLPLQTPLEPSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
QLL++ H LP QT EPS R EELD+++ H+EK I +++ L +RPLLG++ +
Sbjct: 292 QLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 116
Score = 42.8 bits (87), Expect(2) = 2e-028
Identities = 23/53 (43%), Positives = 26/53 (49%)
Frame = +1 / -1
Query: 622 SFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXXTPR*LYLRNVLFL 780
SFL+ A+GFL +PL NLL R KS T TP NVLFL
Sbjct: 291 SFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLFL 133
Score = 26.7 bits (52), Expect(3) = 1e-022
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 130 SQEEDV*EVCLQRS*SRCSSRYVY 201
Score = 22.6 bits (43), Expect(3) = 1e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 98 DVEPEVAAAGVPKK 139
>gb|BE038827.1|BE038827 AB04G03 AB Arabidopsis thaliana cDNA 5' similar to 40s ribosomal
protein s15, mRNA sequence
Length = 729
Score = 273 bits (590), Expect(2) = 2e-076
Identities = 113/125 (90%), Positives = 120/125 (96%)
Frame = -1 / -1
Query: 737 LDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLR 558
LDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLR
Sbjct: 624 LDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLR 445
Query: 557 NMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRF 378
NMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRF
Sbjct: 444 NMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRF 265
Query: 377 IPLK* 363
IPLK*
Sbjct: 264 IPLK* 250
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 251 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 430
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 702
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 431 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 589
Score = 154 bits (331), Expect = 4e-036
Identities = 66/124 (53%), Positives = 85/124 (68%)
Frame = +3 / +1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 250 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 429
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHV 722
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++ H+
Sbjct: 430 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHI 609
Query: 723 EKRI 734
EK I
Sbjct: 610 EKSI 621
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -3
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 541 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 362
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 361 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 260
Score = 36.3 bits (73), Expect(2) = 2e-076
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -1 / -2
Query: 794 AAGAPKKRTFRKYSYRGV 741
AAG PKKRTF+K++++GV
Sbjct: 680 AAGVPKKRTFKKFAFKGV 627
Score = 22.6 bits (43), Expect(2) = 3e-023
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 701 DVEPEVAAAGVPKK 660
>emb|Z23162.1|ATRBPS15B A.thaliana H1flk-3 gene, 3' end, and ribosomal protein S15 gene,
complete CDS
Length = 2780
Score = 195 bits (421), Expect(3) = 5e-072
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = -1 / +3
Query: 623 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 444
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 1968 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 2147
Query: 443 SISYKPVKHGRPGIGATHSSRFIPLK* 363
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 2148 SISYKPVKHGRPGVGATHSSRFIPLK* 2228
Score = 158 bits (339), Expect(3) = 4e-045
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = +1 / -2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 2227 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 2048
Query: 544 TMIMLRRCVLTGSGFSPAGASFFAL 618
TMIM + VLTGSGFSP GAS F L
Sbjct: 2047 TMIMFLKWVLTGSGFSPCGASLFCL 1973
Score = 105 bits (224), Expect = 2e-021
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 2228 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 2049
Query: 543 DNDHVTEMCLDWLWFLT 593
D+DHV ++ W W LT
Sbjct: 2048 DDDHVPQVGSHWFWLLT 1998
Score = 82.6 bits (174), Expect(3) = 5e-072
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 666
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 1235 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 1363
Score = 43.7 bits (89), Expect(3) = 4e-045
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3 / -2
Query: 669 PSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
PS R EELD+++ H+EK I +++ L +RPLLG++ +
Sbjct: 1360 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 1232
Score = 42.8 bits (87), Expect(3) = 5e-072
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / +2
Query: 671 RFQRGLKRKPMALIKKLRKA 612
RF RGL RKPMALIKKLRKA
Sbjct: 1445 RFSRGLTRKPMALIKKLRKA 1504
Score = 28.6 bits (56), Expect(3) = 4e-045
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / -3
Query: 613 ALRSFLMSAMGFLFRPLWNL 672
A SFL+ A+GFL +PL NL
Sbjct: 1503 AFLSFLIRAIGFLVKPLENL 1444
>gb|AV545466.1|AV545466 AV545466 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ84a04F 3', mRNA sequence
Length = 561
Score = 270 bits (583), Expect = 6e-071
Identities = 112/130 (86%), Positives = 121/130 (93%)
Frame = -1 / -1
Query: 734 DALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRN 555
DALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRKAK++APAGEKPE V++HLRN
Sbjct: 561 DALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEAVRSHLRN 382
Query: 554 MIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFI 375
MIIVPEMIGSI+GVYNGKTF QVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFI
Sbjct: 381 MIIVPEMIGSIIGVYNGKTFKQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFI 202
Query: 374 PLK*AVTRLC 345
PLK* R+C
Sbjct: 201 PLK*RPYRVC 172
Score = 188 bits (404), Expect = 3e-046
Identities = 85/113 (75%), Positives = 90/113 (79%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLIST LKV PL TP MLPIISG
Sbjct: 191 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTCLKVFPLYTPMMLPIISG 370
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 702
TMIM + +LT SGFSPAGAS FALRSFL+ A+GFL PL NLL R KS T
Sbjct: 371 TMIMFLKWLLTASGFSPAGASLFALRSFLIKAIGFLVNPLENLLRIREEKSLT 529
Score = 145 bits (311), Expect = 2e-033
Identities = 61/125 (48%), Positives = 86/125 (68%)
Frame = +3 / +1
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+L+E L++V N+ASNH
Sbjct: 187 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLLESLSIVHTNDASNHF 366
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGH 719
R NDHV ++ W LTS + FRLA+ L++ H L Q+ EPS EELD+++ H
Sbjct: 367 RHNDHVPQVASHCFWLLTSWCLSFRLAEFLNQSHRLSRQSSREPSANTGREELDKIIGRH 546
Query: 720 VEKRI 734
VEK I
Sbjct: 547 VEKSI 561
Score = 112 bits (240), Expect = 1e-023
Identities = 58/129 (44%), Positives = 76/129 (58%)
Frame = -3 / -3
Query: 732 CASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*H 553
C+SRHV+ AL +KV +E+A+G E QGEK + W*E R+S+ H
Sbjct: 559 CSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKRGTSW*EARSSEKPLEEH 380
Query: 552 DHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
DHC *+DWKH W +Q +D Q DQA*DD LPC VLHL+ A A A C+PLL V+
Sbjct: 379 DHCA*NDWKHHWCVQWKDFQASGDQA*DDWTLPCRVLHLVQAS*AR*AWRWCYPLLQVHP 200
Query: 372 SEMSCYPAL 346
S++ +L
Sbjct: 199 SQVKTIQSL 173
>emb|AL391712.1|ATT5E8 Arabidopsis thaliana DNA chromosome 5, BAC clone T5E8 (ESSA project)
Length = 103534
Score = 202 bits (436), Expect(3) = 1e-070
Identities = 81/93 (87%), Positives = 88/93 (94%)
Frame = -1 / -3
Query: 623 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 444
+R K++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 96743 MRDQKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 96564
Query: 443 SISYKPVKHGRPGIGATHSSRFIPLK*AVTRLC 345
SISYKPVKHGRPG+GATHSSRFIPLK* R+C
Sbjct: 96563 SISYKPVKHGRPGVGATHSSRFIPLK*RPYRVC 96465
Score = 186 bits (401), Expect(2) = 3e-063
Identities = 77/94 (81%), Positives = 85/94 (90%)
Frame = -1 / -1
Query: 623 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 444
L + K +APAGEKP V+THLRNMIIVPEMIGS++GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 95089 LYEQKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEF 94910
Query: 443 SISYKPVKHGRPGIGATHSSRFIPLK*AVTRLCS 342
SISYKPVKHGRPG+GAT+SSRFIPLK* + L S
Sbjct: 94909 SISYKPVKHGRPGVGATNSSRFIPLK*IIKLLWS 94808
Score = 182 bits (393), Expect(3) = 5e-064
Identities = 72/84 (85%), Positives = 81/84 (96%)
Frame = -1 / -2
Query: 611 KKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISY 432
K DAPAGEKPE V+THLRNM+I+PEMIGSI+GVYNGKTFNQ+EIKPEMIGHYLAEFSI+Y
Sbjct: 93411 KLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITY 93232
Query: 431 KPVKHGRPGIGATHSSRFIPLK*A 360
KPV+HG+PG GATHSSRFIPLK*+
Sbjct: 93231 KPVRHGKPGHGATHSSRFIPLK*S 93160
Score = 160 bits (345), Expect(3) = 1e-041
Identities = 69/83 (83%), Positives = 71/83 (85%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL EMENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 96484 HLRGMNLEEWVAPTPGLPCLTGLYEMENSAR*CPIISGLISTWLKVFPLYTPMMLPIISG 96663
Query: 544 TMIMLRRCVLTGSGFSPAGASFF 612
TMIM + VLTGSGFSPAGAS F
Sbjct: 96664 TMIMFLKWVLTGSGFSPAGASLF 96732
Score = 152 bits (326), Expect(2) = 5e-036
Identities = 67/94 (71%), Positives = 74/94 (78%)
Frame = +1 / +3
Query: 331 TLGRLQSRVTAHFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL 510
++ +L + H RGIN EE VAP PGLPCLTGL E+ENSA+* PIISGLISTWLKV PL
Sbjct: 94797 SITKLHKSLIIHLRGINLEELVAPTPGLPCLTGLYEIENSAK*CPIISGLISTWLKVFPL 94976
Query: 511 *TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFF 612
*TP LPIISGTMIM R VLT +GFSPAGAS F
Sbjct: 94977 *TPMTLPIISGTMIMFLRWVLTAAGFSPAGASIF 95078
Score = 139 bits (298), Expect(3) = 3e-036
Identities = 64/83 (77%), Positives = 66/83 (79%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RGIN EE VAP PGLPCLTGL* +ENSAR* PIISGLIS WLKV PL TP MLPIISG
Sbjct: 93164 HLRGINLEECVAP*PGLPCLTGL*VIENSAR*CPIISGLISIWLKVFPLYTPMMLPIISG 93343
Query: 544 TMIMLRRCVLTGSGFSPAGASFF 612
+ M R VLT SGFSPAGAS F
Sbjct: 93344 IITMFLRWVLTTSGFSPAGASSF 93412
Score = 110 bits (234), Expect = 9e-023
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +3 / +3
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R++P GVG T+ P +L+ L+ DGEL KV+++HLRLDL+LVE L++V N+ASNH
Sbjct: 96480 SSLERDEPGGVGSTNARPTVLNWLVRDGELCKVMSNHLRLDLHLVESLSIVHTNDASNHF 96659
Query: 540 RDNDHVTEMCLDWLWFLTSRSILF 611
R NDHV ++ W W LTS + F
Sbjct: 96660 RHNDHVPQVGSHWFWLLTSWCLSF 96731
Score = 88.1 bits (186), Expect(2) = 3e-063
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = -1 / -3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKK 624
AAG KKRTF+K+S+RGVDLDALLDMSTDDLV+LFP+R RRR + L ++ ++ ++
Sbjct: 95519 AAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRLEDSLNQRALSQFRR 95349
Score = 81.3 bits (171), Expect(3) = 1e-070
Identities = 32/42 (76%), Positives = 39/42 (92%)
Frame = -1 / -1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 669
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR
Sbjct: 97213 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRR 97088
Score = 80.3 bits (169), Expect(3) = 5e-064
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = -1 / -1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 666
AA KKRTF+K+S++GVDLDALLDM TDDLV+LFP+R RRRF
Sbjct: 93844 AAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRF 93716
Score = 42.8 bits (87), Expect(3) = 1e-070
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / -2
Query: 671 RFQRGLKRKPMALIKKLRKA 612
RF RGL RKPMALIKKLRKA
Sbjct: 97005 RFSRGLTRKPMALIKKLRKA 96946
Score = 41.4 bits (84), Expect(3) = 5e-064
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / -1
Query: 671 RFQRGLKRKPMALIKKLRKAKK 606
R RGL RKPMALIKKLRKA K
Sbjct: 93634 RMSRGLTRKPMALIKKLRKAVK 93569
Score = 37.7 bits (76), Expect(3) = 3e-036
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3 / +2
Query: 666 EPSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLL 779
+PS EELD+++ GHV+K I +D+ L ER LL
Sbjct: 93716 KPSSYTGREELDKIISGHVKKSIEIDSFEGKLFERSLL 93829
Score = 35.0 bits (70), Expect(3) = 1e-041
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3 / +2
Query: 669 PSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLL 779
PS EELD+++ HVEK I +D+ ER LL
Sbjct: 97088 PSANTGREELDKIIGRHVEKSIEIDSFEGEFLERSLL 97198
Score = 33.6 bits (67), Expect(3) = 3e-036
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +3
Query: 604 SFFALRSFLMSAMGFLFRPL 663
SF ALR+FLM A+GFL PL
Sbjct: 93567 SFTALRNFLMRAIGFLVNPL 93626
Score = 33.1 bits (66), Expect(3) = 1e-041
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 613 ALRSFLMSAMGFLFRPLWNL 672
ALRSFL+ A+GFL PL NL
Sbjct: 96947 ALRSFLIKAIGFLVNPLENL 97006
Score = 31.3 bits (62), Expect(2) = 5e-036
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 613 ALRSFLMSAMGFLFRPLWNL 672
A RSFL+ A+GFL PL NL
Sbjct: 95248 AFRSFLIKAIGFLVNPLENL 95307
>gb|AV536604.1|AV536604 AV536604 Arabidopsis thaliana liquid-cultured seedlings Columbia
Arabidopsis thaliana cDNA clone pAZNII0335R 5', mRNA
sequence
Length = 461
Score = 268 bits (579), Expect = 2e-070
Identities = 109/126 (86%), Positives = 120/126 (95%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 83 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 262
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSIS 435
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSIS
Sbjct: 263 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSIS 442
Query: 434 YKPVKH 417
YKPVKH
Sbjct: 443 YKPVKH 460
Score = 159 bits (341), Expect = 2e-037
Identities = 77/121 (63%), Positives = 82/121 (67%)
Frame = +1 / -3
Query: 418 CLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPA 597
CLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISGTMIM + VLTGSGFSP
Sbjct: 459 CLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPC 280
Query: 598 GASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXXTPR*LYLRNVLF 777
GAS FA SFL+ A+GFL +PL NLL R KS T TP NVLF
Sbjct: 279 GASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLF 100
Query: 778 L 780
L
Sbjct: 99 L 97
Score = 153 bits (328), Expect = 9e-036
Identities = 65/127 (51%), Positives = 88/127 (69%)
Frame = +3 / -2
Query: 417 MLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLRDNDHVTEMCLDWLWFLTS 596
+LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH RD+DHV ++ W W LT
Sbjct: 460 VLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTL 281
Query: 597 RSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPL 776
+ FR QLL++ H LP QT EPS R EELD+++ H+EK I +++ L +RPL
Sbjct: 280 WCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPL 101
Query: 777 LGSAGGN 797
LG++ +
Sbjct: 100 LGNSSSS 80
Score = 100 bits (212), Expect(3) = 2e-023
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = -3 / +1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 223 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 402
Query: 474 *DDRPLPC*VLHLL*AGQA 418
*DD LP *VL+L+ AGQA
Sbjct: 403 *DDWSLPG*VLYLIQAGQA 459
Score = 26.7 bits (52), Expect(3) = 2e-023
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVH 712
SQEEDV +V L RC+SR+V+
Sbjct: 94 SQEEDV*EVCLQRS*SRCSSRYVY 165
Score = 22.6 bits (43), Expect(3) = 2e-023
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +2
Query: 812 DVEPEVAAGAPKKR 771
DVEPEVAA K+
Sbjct: 62 DVEPEVAAAGVPKK 103
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete
sequence
Length = 107527
Score = 195 bits (421), Expect(3) = 7e-069
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = -1 / +3
Query: 623 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 444
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 91092 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 91271
Query: 443 SISYKPVKHGRPGIGATHSSRFIPLK* 363
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 91272 SISYKPVKHGRPGVGATHSSRFIPLK* 91352
Score = 158 bits (339), Expect(3) = 6e-042
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = +1 / -1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 91351 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 91172
Query: 544 TMIMLRRCVLTGSGFSPAGASFFAL 618
TMIM + VLTGSGFSP GAS F L
Sbjct: 91171 TMIMFLKWVLTGSGFSPCGASLFCL 91097
Score = 105 bits (224), Expect = 2e-021
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = +3 / -3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 91352 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 91173
Query: 543 DNDHVTEMCLDWLWFLT 593
D+DHV ++ W W LT
Sbjct: 91172 DDDHVPQVGSHWFWLLT 91122
Score = 82.6 bits (174), Expect(3) = 7e-069
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 666
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 90359 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 90487
Score = 43.7 bits (89), Expect(3) = 6e-042
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3 / -1
Query: 669 PSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
PS R EELD+++ H+EK I +++ L +RPLLG++ +
Sbjct: 90484 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 90356
Score = 42.8 bits (87), Expect(3) = 7e-069
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / +2
Query: 671 RFQRGLKRKPMALIKKLRKA 612
RF RGL RKPMALIKKLRKA
Sbjct: 90569 RFSRGLTRKPMALIKKLRKA 90628
Score = 28.6 bits (56), Expect(3) = 6e-042
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1 / -2
Query: 613 ALRSFLMSAMGFLFRPLWNL 672
A SFL+ A+GFL +PL NL
Sbjct: 90627 AFLSFLIRAIGFLVKPLENL 90568
>gb|AV553829.1|AV553829 AV553829 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ73e06R 5', mRNA sequence
Length = 477
Score = 218 bits (470), Expect(2) = 9e-068
Identities = 89/106 (83%), Positives = 100/106 (94%)
Frame = -1 / +1
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 85 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 264
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIK 477
AK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIK
Sbjct: 265 AKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 402
Score = 124 bits (266), Expect(2) = 5e-035
Identities = 52/108 (48%), Positives = 72/108 (66%)
Frame = +3 / -1
Query: 474 RLDLNLVEGLAVVDPNNASNHLRDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPL 653
+LDLNLVE L+VV N+ASNH RD+DHV ++ W W LT + FR QLL++ H LP
Sbjct: 405 QLDLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPC 226
Query: 654 QTPLEPSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
QT EPS R EELD+++ H+EK I +++ L +RPLLG++ +
Sbjct: 225 QTSREPSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 82
Score = 124 bits (265), Expect(2) = 7e-032
Identities = 60/101 (59%), Positives = 64/101 (63%)
Frame = +1 / -2
Query: 478 LISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFR 657
LISTWLKV PL TP MLPIISGTMIM + VLTGSGFSP GAS FA SFL+ A+GFL +
Sbjct: 401 LISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVK 222
Query: 658 PLWNLLLARAGKSWTXXXXXXXXXXXXXTPR*LYLRNVLFL 780
PL NLL R KS T TP NVLFL
Sbjct: 221 PLENLLRIREEKSLTRSSVDISRRASRSTPLKANFLNVLFL 99
Score = 62.0 bits (129), Expect(2) = 9e-068
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -1 / +3
Query: 473 EMIGHYLAEFSISYKPVKHGRPGI 402
EMIGHYLAEFSISYKPVKHGRPG+
Sbjct: 405 EMIGHYLAEFSISYKPVKHGRPGV 476
Score = 46.0 bits (94), Expect(2) = 5e-035
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +1 / -3
Query: 406 PGLPCLTGL*EMENSAR*WPIIS 474
PGLPCLTGL E+ENSAR* PIIS
Sbjct: 472 PGLPCLTGLYEIENSAR**PIIS 404
Score = 35.9 bits (72), Expect(2) = 7e-032
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3 / -2
Query: 402 DTGPAMLDRLIGDGELSKVVADHLRL 479
+T P +LDRL+ D ELS+VV +HL L
Sbjct: 476 NTRPTVLDRLV*DRELSQVVTNHLSL 399
>gb|AV565619.1|AV565619 AV565619 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ227f09F 3', mRNA sequence
Length = 596
Score = 253 bits (548), Expect = 4e-066
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = -1 / -1
Query: 710 DDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMI 531
DDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMI
Sbjct: 596 DDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMI 417
Query: 530 GSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
GSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 416 GSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 249
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 250 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 429
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 702
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 430 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 588
Score = 144 bits (310), Expect = 3e-033
Identities = 62/116 (53%), Positives = 80/116 (68%)
Frame = +3 / +3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 249 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 428
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELDEVV 710
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD+++
Sbjct: 429 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELDKII 596
Score = 108 bits (231), Expect = 2e-022
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -3
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 540 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 361
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 360 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 259
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 195 bits (421), Expect(3) = 1e-064
Identities = 79/87 (90%), Positives = 84/87 (96%)
Frame = -1 / -1
Query: 623 LRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEF 444
L K K++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEF
Sbjct: 1142187 LIKQKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEF 1142008
Query: 443 SISYKPVKHGRPGIGATHSSRFIPLK* 363
SISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 1142007 SISYKPVKHGRPGVGATHSSRFIPLK* 1141927
Score = 158 bits (339), Expect(2) = 2e-039
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 1141928 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 1142107
Query: 544 TMIMLRRCVLTGSGFSPAGASFFAL 618
TMIM + VLTGSGFSP GAS F L
Sbjct: 1142108 TMIMFLKWVLTGSGFSPCGASLFCL 1142182
Score = 105 bits (224), Expect(3) = 1e-021
Identities = 44/77 (57%), Positives = 56/77 (72%)
Frame = +3 / +1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 1141927 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 1142106
Query: 543 DNDHVTEMCLDWLWFLT 593
D+DHV ++ W W LT
Sbjct: 1142107 DDDHVPQVGSHWFWLLT 1142157
Score = 97.3 bits (206), Expect(3) = 5e-033
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = -3 / -3
Query: 612 EKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHLL 433
EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA*DD LP *VL+L+
Sbjct: 1142176 EKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA*DDWSLPG*VLYLI 1141997
Query: 432 *AGQAWQARYRCHPLLAVYS 373
AGQA A C+PL ++S
Sbjct: 1141996 QAGQAR*AWCWCYPLFQIHS 1141937
Score = 82.6 bits (174), Expect(3) = 1e-064
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = -1 / -3
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRF 666
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRR+
Sbjct: 1142920 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRY 1142792
Score = 73.5 bits (154), Expect(3) = 5e-033
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1 / -3
Query: 797 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 669
VAAG KKR F+K+S+RGVDLDALLDMST+DLV+ F +R RRR
Sbjct: 12296971 VAAGIVKKRIFKKFSFRGVDLDALLDMSTEDLVKHFSSRIRRR 12296843
Score = 43.7 bits (89), Expect(2) = 2e-039
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3 / +2
Query: 669 PSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
PS R EELD+++ H+EK I +++ L +RPLLG++ +
Sbjct: 1142795 PSTNTRREELDKIISRHIEKSIEINSFEGKLLKRPLLGNSSSS 1142923
Score = 43.2 bits (88), Expect(3) = 5e-033
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 674 RRFQRGLKRKPMALIKKLRKAKK 606
+RF RG RKPMALIKKLRKA K
Sbjct: 12296763 KRFSRGFTRKPMALIKKLRKAVK 12296695
Score = 42.8 bits (87), Expect(3) = 1e-064
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / -3
Query: 671 RFQRGLKRKPMALIKKLRKA 612
RF RGL RKPMALIKKLRKA
Sbjct: 1142710 RFSRGLTRKPMALIKKLRKA 1142651
Score = 35.4 bits (71), Expect(3) = 1e-021
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 607 FFALRSFLMSAMGFLFRPLWNLL 675
F ALR+FL+ A+GFL PL NLL
Sbjct: 12296696 FTALRNFLIKAIGFLVNPLENLL 12296764
Score = 34.1 bits (68), Expect(3) = 1e-021
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3 / +2
Query: 669 PSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
PS E D++ GHVEKRI +D++ L E L ++ N
Sbjct: 12296843 PSANTGTEMFDKIFGGHVEKRIEIDSSERKLLEDSLFHNSSRN 12296971
>gb|N37540.1|N37540 18767 Lambda-PRL2 Arabidopsis thaliana cDNA clone 205M16T7, mRNA
sequence
Length = 528
Score = 249 bits (538), Expect = 1e-064
Identities = 101/119 (84%), Positives = 113/119 (94%)
Frame = -1 / +2
Query: 794 AAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRK 615
AAG PKKRTF+K++++GVDLDALLDMSTDDLV+LF +R RRRF RGL RKPMALIKKLRK
Sbjct: 20 AAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRK 199
Query: 614 AKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSI 438
AK++APAGEKPEPV+THLRNMIIVPEMIGSI+GVYNGK FNQVE+KPEMIGHYLAEFSI
Sbjct: 200 AKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKAFNQVEVKPEMIGHYLAEFSI 376
Score = 149 bits (320), Expect = 1e-034
Identities = 72/114 (63%), Positives = 76/114 (66%)
Frame = +1 / -1
Query: 436 EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFA 615
+MENSAR* PIISGL STWLK PL TP MLPIISGTMIM + VLTGSGFSPAGAS FA
Sbjct: 378 KMENSAR*CPIISGLTSTWLKAFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPAGASLFA 199
Query: 616 LRSFLMSAMGFLFRPLWNLLLARAGKSWTXXXXXXXXXXXXXTPR*LYLRNVLF 777
LRSFL+ A+GFL PL NLL R KS T TP NVLF
Sbjct: 198 LRSFLIKAIGFLVNPLENLLRIREEKSLTRSSVDMSRRASRSTPLKANFLNVLF 37
Score = 130 bits (279), Expect = 5e-029
Identities = 56/114 (49%), Positives = 76/114 (66%)
Frame = +3 / -3
Query: 438 DGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLRDNDHVTEMCLDWLWFLTSRSILFRL 617
DG+L KV+++HLRLDL+LVE L++V N+ASNH R NDHV ++ W W LTS + FRL
Sbjct: 376 DGKLCKVMSNHLRLDLHLVESLSIVHTNDASNHFRHNDHVPQVGSHWFWLLTSWCLSFRL 197
Query: 618 AQLLDECHGLPLQTPLEPSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLL 779
A+ L++ H L Q+ EPS EELD+++ HVEK I +D+ ER LL
Sbjct: 196 AEFLNQSHRLSRQSSREPSANTGREELDKIIGRHVEKSIEIDSFEGEFLERSLL 35
Score = 106 bits (227), Expect = 8e-022
Identities = 52/116 (44%), Positives = 69/116 (59%)
Frame = -3 / +1
Query: 783 SQEEDVPQVQLXXXXXRCASRHVHGRPRPALPRARQEKVPEGSEEEAHGTHQEAAQGEKG 604
S+EE+V +++L RC+SRHV+ AL +KV +E+A+G E QGEK
Sbjct: 31 SKEENVQEIRLQRSRSRCSSRHVYR*SCQALLFPYSQKVL*RIDEKAYGFD*ETPQGEKR 210
Query: 603 CSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA*DDRPLPC*VLHL 436
+ W*E R S++ HDHC *+DWKH W +Q + QP QA*DD LPC V HL
Sbjct: 211 GTSW*EARTSENPLEEHDHCA*NDWKHHWCVQWKGFQPSGGQA*DDWTLPCRVFHL 378
>gb|BP582590.1|BP582590 BP582590 RAFL14 Arabidopsis thaliana cDNA clone RAFL14-36-N16 3',
mRNA sequence
Length = 455
Score = 246 bits (532), Expect = 7e-064
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = -1 / -2
Query: 701 VQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSI 522
V+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI
Sbjct: 454 VKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSI 275
Query: 521 VGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 274 IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 116
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = +1 / +3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 117 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 296
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 702
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 297 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 455
Score = 141 bits (303), Expect = 3e-032
Identities = 62/113 (54%), Positives = 77/113 (68%)
Frame = +3 / +2
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 116 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 295
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELD 701
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD
Sbjct: 296 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELD 454
Score = 108 bits (231), Expect = 2e-022
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 407 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 228
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 227 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 126
>gb|BP619574.1|BP619574 BP619574 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-33-M09 3',
mRNA sequence
Length = 451
Score = 246 bits (532), Expect = 7e-064
Identities = 101/113 (89%), Positives = 108/113 (95%)
Frame = -1 / -2
Query: 701 VQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSI 522
V+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI
Sbjct: 450 VKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSI 271
Query: 521 VGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 270 IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 112
Score = 188 bits (406), Expect = 2e-046
Identities = 84/113 (74%), Positives = 90/113 (79%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 113 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 292
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLARAGKSWT 702
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R KS T
Sbjct: 293 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIREEKSLT 451
Score = 141 bits (303), Expect = 3e-032
Identities = 62/113 (54%), Positives = 77/113 (68%)
Frame = +3 / +1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 112 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 291
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGARGEELD 701
D+DHV ++ W W LT + FR QLL++ H LP QT EPS R EELD
Sbjct: 292 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTSREPSTNTRREELD 450
Score = 108 bits (231), Expect = 2e-022
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 403 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 224
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 223 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 122
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7
Length = 60476
Score = 184 bits (397), Expect(3) = 8e-064
Identities = 75/83 (90%), Positives = 80/83 (96%)
Frame = -1 / +2
Query: 611 KKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISY 432
K +APAGEKP V+THLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISY
Sbjct: 56030 KMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISY 56209
Query: 431 KPVKHGRPGIGATHSSRFIPLK* 363
KPVKHGRPG+GAT+SSRFIPLK*
Sbjct: 56210 KPVKHGRPGVGATNSSRFIPLK* 56278
Score = 152 bits (326), Expect(3) = 3e-039
Identities = 65/87 (74%), Positives = 71/87 (81%)
Frame = +1 / -3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RGIN EE VAP PGLPC TGL E+ENSA+* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 56277 HLRGINLEELVAPTPGLPCFTGLYEIENSAK*CPIISGLISTWLKVFPLYTPMMLPIISG 56098
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRS 624
TMIM +CVLT +GFSPAGAS F ++
Sbjct: 56097 TMIMFLKCVLTDAGFSPAGASIFCSKT 56017
Score = 105 bits (225), Expect = 2e-021
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = +3 / -2
Query: 360 SSFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHL 539
SS +R+KP G+G T+T P +L R + D ELS+V+++HLRLDL+LV+ L+VV N+ASNH
Sbjct: 56281 SSLERDKPGGIGSTNTRPTVLYRFV*D*ELSQVMSNHLRLDLDLVKSLSVVHTNDASNHF 56102
Query: 540 RDNDHVTEMCLDWLWFLTSRSILFRL 617
R NDHV ++C W LTS + F L
Sbjct: 56101 RHNDHVPQVCSH*CWLLTSWCLHFLL 56024
Score = 73.5 bits (154), Expect(3) = 8e-064
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = -1 / +1
Query: 797 VAAGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRR 669
VAAG KKRTF+K+S+RGVDLDALLDMS +DLV+ F +R RRR
Sbjct: 55225 VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRR 55353
Score = 44.1 bits (90), Expect(3) = 8e-064
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 671 RFQRGLKRKPMALIKKLRKAKK 606
RF RGL RKPMALIKKLRKA K
Sbjct: 55434 RFSRGLTRKPMALIKKLRKAVK 55499
Score = 33.6 bits (67), Expect(3) = 3e-039
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3 / -3
Query: 669 PSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSAGGN 797
PS E D++ GHVEKRI +D++ L E L ++ N
Sbjct: 55353 PSANTGTEMFDKIFDGHVEKRIEIDSSERKLFEGSLFHNSSRN 55225
Score = 33.6 bits (67), Expect(3) = 3e-039
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1 / -2
Query: 607 FFALRSFLMSAMGFLFRPLWNL 672
F ALR+FL+ A+GFL PL NL
Sbjct: 55498 FTALRNFLIKAIGFLVNPLENL 55433
>gb|AW004145.1|AW004145 701500185 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701500185, mRNA sequence
Length = 631
Score = 201 bits (433), Expect(2) = 1e-062
Identities = 83/113 (73%), Positives = 97/113 (85%)
Frame = -1 / -2
Query: 791 AGAPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKA 612
AG PKKRT +K++++GV LDALLDMST+DLV+LF +R RRRF RGL KPMALI LRKA
Sbjct: 591 AGVPKKRTSKKFAFKGVHLDALLDMSTNDLVKLFSSRIRRRFSRGLTCKPMALIHTLRKA 412
Query: 611 KKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYL 453
+DAP GEKPEPV+THLRNMII PEMIGSI+GVYNG+T +QVEIKPEMI Y+
Sbjct: 411 HRDAPQGEKPEPVRTHLRNMIIFPEMIGSIIGVYNGETLDQVEIKPEMIAQYV 253
Score = 116 bits (248), Expect(2) = 6e-034
Identities = 51/111 (45%), Positives = 72/111 (64%)
Frame = +3 / +1
Query: 456 VVADHLRLDLNLVEGLAVVDPNNASNHLRDNDHVTEMCLDWLWFLTSRSILFRLAQLLDE 635
V+++HLRLDLNLVE L+VV N+ASNH R++DHV ++ W W LT I R Q +++
Sbjct: 256 VLSNHLRLDLNLVESLSVVHSNDASNHFREDDHVPQVGSHWFWLLTLWCIPVRFPQRVNQ 435
Query: 636 CHGLPLQTPLEPSPGARGEELDEVVRGHVEKRI*VDAAVAVLAERPLLGSA 788
H L QT EPS R EELD+++ H+E I +++ L RPLLG++
Sbjct: 436 SHWLTCQTSREPSTNTR*EELDKIISRHIE*SIEMNSFEGKLLRRPLLGNS 588
Score = 103 bits (220), Expect(2) = 4e-022
Identities = 55/105 (52%), Positives = 61/105 (58%)
Frame = +1 / +2
Query: 466 IISGLISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMG 645
IISGLISTW +V PL TP MLPIISG MIM + VLTGSGFSP GAS A S + A+G
Sbjct: 266 IISGLISTWSRVSPLYTPMMLPIISGKMIMFLKWVLTGSGFSPCGASLCAFLSV*IRAIG 445
Query: 646 FLFRPLWNLLLARAGKSWTXXXXXXXXXXXXXTPR*LYLRNVLFL 780
+PL NLL R KS T TP +VLFL
Sbjct: 446 LHVKPLENLLRIRDEKSLTRSLVDISSRASR*TPLKANFLDVLFL 580
Score = 62.0 bits (129), Expect(2) = 1e-062
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -1 / -3
Query: 452 AEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
AEFSISYKPVKH PG+GAT SSRFIPLK*
Sbjct: 251 AEFSISYKPVKHCMPGVGATDSSRFIPLK* 162
Score = 50.6 bits (104), Expect(2) = 6e-034
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSA 453
H RG+N EE VAP PG+ C TGL E+ENSA
Sbjct: 163 HLRGMNLEESVAPTPGIQCFTGLYEIENSA 252
Score = 23.5 bits (45), Expect(2) = 4e-022
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 390 VGGTDTGPAMLDRLIGDGELS 452
VG T+T +L RLI D ELS
Sbjct: 189 VGSTNTRHTVLYRLI*DRELS 251
>gb|AV532062.1|AV532062 AV532062 Arabidopsis thaliana flower buds Columbia Arabidopsis
thaliana cDNA clone FB035a04F 3', mRNA sequence
Length = 508
Score = 237 bits (512), Expect = 4e-061
Identities = 96/108 (88%), Positives = 104/108 (96%)
Frame = -1 / -2
Query: 686 ARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYN 507
+R R+RF +GL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYN
Sbjct: 504 SRIRKRFSKGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYN 325
Query: 506 GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 324 GKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 181
Score = 184 bits (397), Expect = 3e-045
Identities = 81/107 (75%), Positives = 87/107 (81%)
Frame = +1 / +2
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 182 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 361
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRPLWNLLLAR 684
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +PL NLL R
Sbjct: 362 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKPLENLLRIR 502
Score = 129 bits (276), Expect = 1e-028
Identities = 57/108 (52%), Positives = 72/108 (66%)
Frame = +3 / +1
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 181 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 360
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQTPLEPSPGAR 686
D+DHV ++ W W LT + FR QLL++ H LP QT EP R
Sbjct: 361 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQTFREPFTNTR 504
Score = 108 bits (231), Expect = 2e-022
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -3 / -1
Query: 654 EEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*DQA 475
++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*DQA
Sbjct: 472 DKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*DQA 293
Query: 474 *DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 292 *DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 191
>gb|BP594448.1|BP594448 BP594448 RAFL15 Arabidopsis thaliana cDNA clone RAFL15-25-O18 3',
mRNA sequence
Length = 459
Score = 223 bits (482), Expect(2) = 3e-060
Identities = 91/99 (91%), Positives = 96/99 (96%)
Frame = -1 / -3
Query: 659 GLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMIGSIVGVYNGKTFNQVEI 480
GL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMIGSI+GVYNGKTFNQVEI
Sbjct: 406 GLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 227
Query: 479 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
KPEMIGHYLAEFS SYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 226 KPEMIGHYLAEFSTSYKPVKHGRPGVGATHSSRFIPLK* 110
Score = 177 bits (380), Expect = 6e-043
Identities = 76/99 (76%), Positives = 82/99 (82%)
Frame = +1 / +3
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISGLISTWLKVLPL*TPTMLPIISG 543
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISGLISTWLKV PL TP MLPIISG
Sbjct: 111 HLRGMNLEEWVAPTPGLPCLTGLYEVENSAR**PIISGLISTWLKVFPLYTPMMLPIISG 290
Query: 544 TMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFRP 660
TMIM + VLTGSGFSP GAS FA SFL+ A+GFL +P
Sbjct: 291 TMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVKP 407
Score = 122 bits (261), Expect = 2e-026
Identities = 53/99 (53%), Positives = 68/99 (68%)
Frame = +3 / +2
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRLDLNLVEGLAVVDPNNASNHLR 542
S + N+ VG T+T P +LDRL+ ELS+VV +HLRLDLNLVE L+VV N+ASNH R
Sbjct: 110 SLKGNESGRVGSTNTRPTVLDRLV*GRELSQVVTNHLRLDLNLVESLSVVHSNDASNHFR 289
Query: 543 DNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQT 659
D+DHV ++ W W LT + FR QLL++ H LP QT
Sbjct: 290 DDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQT 406
Score = 110 bits (235), Expect = 6e-023
Identities = 51/96 (53%), Positives = 67/96 (69%)
Frame = -3 / -2
Query: 660 GSEEEAHGTHQEAAQGEKGCSCW*ETRASQDTSP*HDHCP*DDWKHCWGLQRQDLQPG*D 481
G ++EA+G+ EA + EKG + *E R S++ HDH P*+DWKH W +QR+D QPG*D
Sbjct: 407 GFDKEANGSD*EAEESEKGGTTR*EARTSENPLEEHDHRP*NDWKHHWSVQRKDFQPG*D 228
Query: 480 QA*DDRPLPC*VLHLL*AGQAWQARYRCHPLLAVYS 373
QA*DD LP *VL+L+ AGQA A C+PL ++S
Sbjct: 227 QA*DDWSLPG*VLYLIQAGQAR*AWCWCYPLFQIHS 120
Score = 31.3 bits (62), Expect(2) = 3e-060
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 710 DDLVQLFPARARRRFQRGLKRK 645
DDLV+LF +R RRF RG ++
Sbjct: 458 DDLVKLFSSRIPRRFSRGFDKE 393
>gb|BP618355.1|BP618355 BP618355 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-27-P19 3',
mRNA sequence
Length = 453
Score = 160 bits (344), Expect(2) = 3e-060
Identities = 66/77 (85%), Positives = 72/77 (93%)
Frame = -1 / -3
Query: 710 DDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVKTHLRNMIIVPEMI 531
DDLV+LF +R RRRF RGL RKPMALIKKLRKAK++AP GEKPEPV+THLRNMIIVPEMI
Sbjct: 451 DDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMI 272
Query: 530 GSIVGVYNGKTFNQVEI 480
GSI+GVYNGKTFNQVEI
Sbjct: 271 GSIIGVYNGKTFNQVEI 221
Score = 116 bits (247), Expect(2) = 2e-041
Identities = 53/75 (70%), Positives = 57/75 (76%)
Frame = +1 / +3
Query: 478 LISTWLKVLPL*TPTMLPIISGTMIMLRRCVLTGSGFSPAGASFFALRSFLMSAMGFLFR 657
LISTWLKV PL TP MLPIISGTMIM + VLTGSGFSP GAS FA SFL+ A+GFL +
Sbjct: 219 LISTWLKVFPLYTPMMLPIISGTMIMFLKWVLTGSGFSPCGASLFAFLSFLIRAIGFLVK 398
Query: 658 PLWNLLLARAGKSWT 702
PL NLL R KS T
Sbjct: 399 PLENLLRIREEKSLT 443
Score = 100 bits (212), Expect(2) = 3e-028
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3 / +2
Query: 480 DLNLVEGLAVVDPNNASNHLRDNDHVTEMCLDWLWFLTSRSILFRLAQLLDECHGLPLQT 659
DLNLVE L+VV N+ASNH RD+DHV ++ W W LT + FR QLL++ H LP QT
Sbjct: 221 DLNLVESLSVVHSNDASNHFRDDDHVPQVGSHWFWLLTLWCLPFRFPQLLNQSHWLPCQT 400
Query: 660 PLEPSPGARGEELDEVV 710
EPS R EELD+++
Sbjct: 401 SREPSTNTRREELDKII 451
Score = 94.5 bits (200), Expect(2) = 3e-060
Identities = 37/39 (94%), Positives = 39/39 (100%)
Frame = -1 / -2
Query: 479 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 363
+PEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK*
Sbjct: 221 QPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK* 105
Score = 75.8 bits (159), Expect(2) = 2e-041
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1 / +1
Query: 364 HFRGINREEWVAPIPGLPCLTGL*EMENSAR*WPIISG 477
H RG+N EEWVAP PGLPCLTGL E+ENSAR* PIISG
Sbjct: 106 HLRGMNLEEWVAPTPGLPCLTGLYEIENSAR**PIISG 219
Score = 47.8 bits (98), Expect(2) = 3e-028
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 363 SFQRNKPRGVGGTDTGPAMLDRLIGDGELSKVVADHLRL 479
S + N+ VG T+T P +LDRL+ D ELS+VV +HLRL
Sbjct: 105 SLKGNESGRVGSTNTRPTVLDRLV*DRELSQVVTNHLRL 221
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,604,161,586
Number of Sequences: 1013581
Number of extensions: 20743072
Number of successful extensions: 128662
Number of sequences better than 1.0e-020: 217
length of database: 302,980,290
effective HSP length: 56
effective length of database: 246,219,754
effective search space used: 60816279238
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)