BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.006B01F020311.3.1
(609 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV762405.1|CV762405 FGAS056794 Triticum aestivum FGAS: L... 246 2e-063
gb|CA744441.1|CA744441 wri1s.pk007.n9 wri1s Triticum aestiv... 238 4e-061
gb|CA745199.1|CA745199 wri1s.pk003.l22 wri1s Triticum aesti... 230 9e-059
gb|DR740099.1|DR740099 FGAS085027 Triticum aestivum FGAS: L... 226 1e-057
gb|BE405824.1|BE405824 WHE0437_C03_E05ZS Wheat etiolated se... 220 9e-056
gb|CD873378.1|CD873378 AZO3.001A10F010509 AZO3 Triticum aes... 218 3e-055
gb|CV777149.1|CV777149 FGAS071553 Triticum aestivum FGAS: L... 218 3e-055
gb|CA722149.1|CA722149 wds1c.pk003.f13.f wds1c Triticum mon... 216 1e-054
gb|BE352592.1|BE352592 WHE0425_E03_I05ZS Wheat etiolated se... 184 5e-045
gb|CK199914.1|CK199914 FGAS008421 Triticum aestivum FGAS: L... 174 5e-042
gb|CV766295.1|CV766295 FGAS060682 Triticum aestivum FGAS: L... 174 5e-042
gb|DR735423.1|DR735423 FGAS081093 Triticum aestivum FGAS: L... 165 4e-039
gb|BF201535.1|BF201535 WHE1771_G01_M01ZS Wheat pre-anthesis... 159 3e-037
gb|BG909063.1|BG909063 TaLr1173F03R TaLr1 Triticum aestivum... 131 6e-029
gb|CD906901.1|CD906901 G468.105K13F011012 G468 Triticum aes... 129 2e-028
gb|BE471138.1|BE471138 WHE0284_C04_E08ZS Wheat drought-stre... 107 9e-022
gb|CV774697.1|CV774697 FGAS069097 Triticum aestivum FGAS: L... 103 1e-020
gb|BJ211530.1|BJ211530 BJ211530 Y. Ogihara unpublished cDNA... 90 2e-016
gb|CD890807.1|CD890807 G118.115H22F010719 G118 Triticum aes... 90 2e-016
gb|CA722273.1|CA722273 wds1c.pk003.j22.f wds1c Triticum mon... 88 8e-016
gb|CA722327.1|CA722327 wds1c.pk003.n24.f wds1c Triticum mon... 88 8e-016
gb|CD906900.1|CD906900 G468.105K13F010810 G468 Triticum aes... 86 3e-015
gb|BJ244366.1|BJ244366 BJ244366 Y. Ogihara unpublished cDNA... 82 5e-014
gb|BQ238862.1|BQ238862 TaE05040C08R TaE05 Triticum aestivum... 82 5e-014
gb|BQ239279.1|BQ239279 TaE05035A05R TaE05 Triticum aestivum... 82 5e-014
gb|BQ239613.1|BQ239613 TaE05028G08R TaE05 Triticum aestivum... 82 5e-014
gb|BQ240278.1|BQ240278 TaE05019G01R TaE05 Triticum aestivum... 82 5e-014
gb|BQ241039.1|BQ241039 TaE05009H02R TaE05 Triticum aestivum... 82 5e-014
gb|BJ270298.1|BJ270298 BJ270298 Y. Ogihara unpublished cDNA... 70 2e-010
gb|BQ620546.1|BQ620546 TaLr1146D03R TaLr1 Triticum aestivum... 64 1e-008
gb|BG263791.1|BG263791 WHE2338_A11_A22ZS Wheat pre-anthesis... 62 5e-008
gb|BF473497.1|BF473497 WHE0929_A12_A23ZS Wheat 5-15 DAP spi... 54 1e-005
gb|CA655728.1|CA655728 wlm0.pk0018.b8 wlm0 Triticum aestivu... 50 2e-004
gb|CV764552.1|CV764552 FGAS058937 Triticum aestivum FGAS: L... 46 0.003
gb|BF293833.1|BF293833 WHE2153_E08_J15ZS Triticum turgidum ... 40 0.17
gb|BJ280727.1|BJ280727 BJ280727 Y. Ogihara unpublished cDNA... 40 0.17
gb|CK161610.1|CK161610 FGAS014181 Triticum aestivum FGAS: L... 40 0.17
gb|CV772446.1|CV772446 FGAS066839 Triticum aestivum FGAS: L... 40 0.17
>gb|CV762405.1|CV762405 FGAS056794 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 822
Score = 246 bits (124), Expect = 2e-063
Identities = 358/436 (82%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 286 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccagacacactgtttggg 345
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 346 atgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagt 405
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 406 aatagaggttttgaagctggtggactccatacgccatcaaatattgacccatggtctata 465
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
| || |||||| | ||| | | ||||| |||||||||| | ||||||||||||||||||
Sbjct: 466 atcggagacgacgcttccatatttgtggtgactgatcgtacatcatgtttcagtcgaaac 525
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
||| | ||||| ||||||||||| ||||| |||| ||||| || || || |||||||||
Sbjct: 526 atcatcgctcttaggatggaggttctctgtgatgaatgcccagccggtggcgttggcatt 585
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
||||||||||| |||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 586 tacaaccctgggttctggggcatgaacatagaagatggaaagtcctacaatctagttatg 645
Query: 502 tatgttaagtcgccaaaaaccacatgcttgacagtttcgctgacaagctctgatgggttg 561
|||||||| || || || | || ||||||||||| | |||||||||||||||||
Sbjct: 646 tatgttaaatcagcagaagctgcagatttgacagtttcattagcaagctctgatgggttg 705
Query: 562 cagaatctggcttcag 577
||||| || |||||||
Sbjct: 706 cagaagctcgcttcag 721
>gb|CA744441.1|CA744441 wri1s.pk007.n9 wri1s Triticum aestivum cDNA clone wri1s.pk007.n9 5'
end, mRNA sequence
Length = 515
Score = 238 bits (120), Expect = 4e-061
Identities = 303/364 (83%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | ||||
Sbjct: 46 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttgga 105
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
| || ||||||||||| ||| | |||||||||||| ||||||||||| || || ||
Sbjct: 106 atattttttgaggagatcaaccatgcaggagctggtggaatatgggcagagcttgttagt 165
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| ||||||||| |||||||||| || ||||| || ||| ||||
Sbjct: 166 aatagaggttttgaagctggaggcccccatactccatcaaatattgaaccatggtccatc 225
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| || ||||| ||| | | ||||| || || || ||||||||||||| ||||||
Sbjct: 226 attggagatgactcttccatatttgtgggaacagaccgcacgtcatgtttcaggcgaaac 285
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
| ||||||||||| |||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct: 286 aaggttgctctaagaatggaggttctctgtgataactgcccagttggcggtgttggcatt 345
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
||||||||||| |||||||||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 346 tacaaccctgggttctggggcatgaacatagaggatgggaagacctacaatctagttatg 405
Query: 502 tatg 505
||||
Sbjct: 406 tatg 409
>gb|CA745199.1|CA745199 wri1s.pk003.l22 wri1s Triticum aestivum cDNA clone wri1s.pk003.l22
5' end, mRNA sequence
Length = 502
Score = 230 bits (116), Expect = 9e-059
Identities = 299/360 (83%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | ||||
Sbjct: 48 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttgga 107
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
| || ||||||||||| ||| | |||||||||||| ||||||||||| || || ||
Sbjct: 108 atattttttgaggagatcaaccatgcaggagctggtggaatatgggcagagcttgttagt 167
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| ||||||||| |||||||||| || ||||| || ||| ||||
Sbjct: 168 aatagaggttttgaagctggaggcccccatactccatcaaatattgaaccatggtccatc 227
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| || ||||| ||| | | ||||| || || || ||||||||||||| ||||||
Sbjct: 228 attggagatgactcttccatatttgtgggaacagaccgcacgtcatgtttcaggcgaaac 287
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
| ||||||||||| |||||||| ||||| || ||||||| | ||||||||||||||||
Sbjct: 288 aaggttgctctaagaatggaggttctctgtgataactgcccagttggcggtgttggcatt 347
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
||||||||||| |||||||||||||||||||| ||||| ||||| || |||||||||||
Sbjct: 348 tacaaccctgggttctggggcatgaacatagaggatgggaagacctacaatctagttatg 407
>gb|DR740099.1|DR740099 FGAS085027 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1097
Score = 226 bits (114), Expect = 1e-057
Identities = 356/436 (81%), Gaps = 3/436 (0%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 197 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 256
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 257 atgttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttagt 316
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 317 aatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtctata 376
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| | ||||| ||| | | ||||| |||||| ||| | ||||||||||||||||||
Sbjct: 377 attggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaac 436
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
|| | ||||| ||||||||||| ||||| |||| ||||| || |||| ||||||||
Sbjct: 437 attatcgctcttaggatggaggttctctgtgatgaatgcccagccggcg---ttggcatt 493
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 494 tacaaccctgggttctggggcatgaacatagaagatggaaagacctacaatctagttatg 553
Query: 502 tatgttaagtcgccaaaaaccacatgcttgacagtttcgctgacaagctctgatgggttg 561
|||||||| || || || | || ||||||||||| | |||||||||||||||||
Sbjct: 554 tatgttaaatcagcagaagctgcagatttgacagtttcattagcaagctctgatgggttg 613
Query: 562 cagaatctggcttcag 577
||||| || |||||||
Sbjct: 614 cagaagctcgcttcag 629
>gb|BE405824.1|BE405824 WHE0437_C03_E05ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0437_C03_E05, mRNA
sequence
Length = 605
Score = 220 bits (111), Expect = 9e-056
Identities = 357/437 (81%), Gaps = 4/437 (0%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgc-tcgaaagatccccgatacattccttgg 200
||||||||||||||||||||| || ||||||| |||||||||||| || ||| | ||||
Sbjct: 70 accctcaaggttgatgcctcgtcacagcttgcctcgaaagatcccggacacactgtttgg 129
Query: 201 ggtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcag 260
| |||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 130 gatgttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttag 189
Query: 261 caacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcat 320
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 190 taatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtctat 249
Query: 321 cgttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaa 380
|||| | ||||| ||| | | ||||| |||||| ||| | |||||||||||||||||
Sbjct: 250 aattggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaa 309
Query: 381 catcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcat 440
||| | ||||| ||||||||||| ||||| |||| ||||| || |||| |||||||
Sbjct: 310 cattatcgctcttaggatggaggttctctgtgatgaatgcccagccggcg---ttggcat 366
Query: 441 ttacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttat 500
|||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 367 ttacaaccctgggttctggggcatgaacatagaagatggaaagacctacaatctagttat 426
Query: 501 gtatgttaagtcgccaaaaaccacatgcttgacagtttcgctgacaagctctgatgggtt 560
||||||||| || || || | || ||||||||||| | ||||||||||||||||
Sbjct: 427 gtatgttaaatcagcagaagctgcagatttgacagtttcattagcaagctctgatgggtt 486
Query: 561 gcagaatctggcttcag 577
|||||| || |||||||
Sbjct: 487 gcagaagctcgcttcag 503
>gb|CD873378.1|CD873378 AZO3.001A10F010509 AZO3 Triticum aestivum cDNA clone AZO3001A10,
mRNA sequence
Length = 557
Score = 218 bits (110), Expect = 3e-055
Identities = 284/342 (83%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 216 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccagacacactgtttggg 275
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 276 atgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagt 335
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 336 aatagaggttttgaagccgggggactccatacgccatcaaatattgacccatggtctata 395
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
| || |||||| | ||| | | ||||| |||||||||| | ||||||||||||||||||
Sbjct: 396 atcggagacgacgcttccatatttgtggcgactgatcgtacatcatgtttcagtcgaaac 455
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
||| | ||||| ||||||||||| ||||| |||| ||||| || || || |||||||||
Sbjct: 456 atcatcgctcttaggatggaggttctctgtgatgaatgcccagccggtggcgttggcatt 515
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaag 483
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 516 tacaaccctgggttctggggcatgaacatagaagatggaaag 557
>gb|CV777149.1|CV777149 FGAS071553 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 840
Score = 218 bits (110), Expect = 3e-055
Identities = 355/436 (81%), Gaps = 3/436 (0%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 294 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 353
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 354 atgttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttagt 413
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 414 aatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtctata 473
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| | ||||| ||| | | ||||| |||||| ||| | ||||||||||||||||||
Sbjct: 474 attggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaac 533
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
|| | ||||| ||||||||||| ||||| |||| ||||| || |||| ||||||||
Sbjct: 534 attatcgctcttaggatggaggttctctgtgatgaatgcccagccggcg---ttggcatt 590
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 591 tacaaccctgggttctggggcatgaacatagaagatggaaagacctacaatctagttatg 650
Query: 502 tatgttaagtcgccaaaaaccacatgcttgacagtttcgctgacaagctctgatgggttg 561
|||||||| || || | | || ||||||||||| | |||||||||||||||||
Sbjct: 651 tatgttaaatcagcagaggctgcagatttgacagtttcattagcaagctctgatgggttg 710
Query: 562 cagaatctggcttcag 577
||||| || |||||||
Sbjct: 711 cagaagctcgcttcag 726
>gb|CA722149.1|CA722149 wds1c.pk003.f13.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.f13.f 3' end, mRNA sequence
Length = 598
Score = 216 bits (109), Expect = 1e-054
Identities = 274/329 (83%)
Strand = Plus / Plus
Query: 173 ctcgaaagatccccgatacattccttggggtgttctttgaggagatgggccacggaggag 232
||||||||||||| ||||| || |||| | || ||||||||||| ||| | |||||
Sbjct: 193 ctcgaaagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggag 252
Query: 233 ctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaata 292
||||||| |||||||||||||| || || || |||||||| ||||| ||||||||| |||
Sbjct: 253 ctggtggaatatgggcagaacttgttagtaatagaggttttgaagctggaggcccccata 312
Query: 293 ctccatcgaacattgacccctggctcatcgttggggacgactcctccgtctatgtggaga 352
||||||| || ||||| || ||| |||| |||| || ||||| ||||| | ||||| |
Sbjct: 313 ctccatcaaatattgagccatggtccatcattggagatgactcttccgtatttgtgggaa 372
Query: 353 ctgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgca 412
| || ||| ||||||||||||| ||||||| ||||||||||| |||||||| |||||
Sbjct: 373 cagaccgtacgtcatgtttcaggcgaaacaaggttgctctaagaatggaggttctctgtg 432
Query: 413 atgactgcccggctggcggtgttggcatttacaaccctggattctggggcatgaacatag 472
|| ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 433 ataactgcccagttggcggtgttggcatttacaaccctgggttctggggcatgaacataa 492
Query: 473 aagatggaaagacatatcatctagttatg 501
| ||||| ||||| || |||||||||||
Sbjct: 493 aggatgggaagacctacaatctagttatg 521
>gb|BE352592.1|BE352592 WHE0425_E03_I05ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0425_E03_I05, mRNA
sequence
Length = 510
Score = 184 bits (93), Expect = 5e-045
Identities = 198/233 (84%)
Strand = Plus / Plus
Query: 345 tgtggagactgatcgttcgtcatgtttcagtcgaaacatcgttgctctaaggatggaggt 404
||||| |||||||||| | ||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 76 tgtggtgactgatcgtacatcatgtttcagtcgaaacatcatcgctcttaggatggaggt 135
Query: 405 cctctgcaatgactgcccggctggcggtgttggcatttacaaccctggattctggggcat 464
||||| |||| ||||| || || || |||||||||||||||||||| |||||||||||
Sbjct: 136 tctctgtgatgaatgcccagccggtggcgttggcatttacaaccctgggttctggggcat 195
Query: 465 gaacatagaagatggaaagacatatcatctagttatgtatgttaagtcgccaaaaaccac 524
||||||||||||||||||| | || ||||||||||||||||||| || || || | |
Sbjct: 196 gaacatagaagatggaaagtcctacaatctagttatgtatgttaaatcagcagaagctgc 255
Query: 525 atgcttgacagtttcgctgacaagctctgatgggttgcagaatctggcttcag 577
| ||||||||||| | |||||||||||||||||||||| || |||||||
Sbjct: 256 agatttgacagtttcattagcaagctctgatgggttgcagaagctcgcttcag 308
>gb|CK199914.1|CK199914 FGAS008421 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 174 bits (88), Expect = 5e-042
Identities = 300/370 (81%), Gaps = 3/370 (0%)
Strand = Plus / Plus
Query: 208 tttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagcaacaga 267
||||||||||| ||| | |||||| ||||| |||||||||||||| || || || |||
Sbjct: 114 tttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttagtaataga 173
Query: 268 ggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcgttggg 327
||||| ||||| || || | | |||| ||||| || |||||||| ||| || ||||
Sbjct: 174 ggttttgaagctgggggactccatacaccatcaaatattgacccatggtctataattgga 233
Query: 328 gacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaacatcgtt 387
| ||||| ||| | | ||||| |||||| ||| | |||||||||||||||||||| |
Sbjct: 234 aatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaacattatc 293
Query: 388 gctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatttacaac 447
||||| ||||||||||| ||||| |||| ||||| || ||| |||||||||||||||
Sbjct: 294 gctcttaggatggaggttctctgtgatgaatgcccagc---cggcgttggcatttacaac 350
Query: 448 cctggattctggggcatgaacatagaagatggaaagacatatcatctagttatgtatgtt 507
||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 351 cctgggttctggggcatgaacatagaagatggaaagacctacaatctagttatgtatgtt 410
Query: 508 aagtcgccaaaaaccacatgcttgacagtttcgctgacaagctctgatgggttgcagaat 567
|| || || || | || ||||||||||| | ||||||||||||||||||||||
Sbjct: 411 aaatcagcagaagctgcagatttgacagtttcattagcaagctctgatgggttgcagaag 470
Query: 568 ctggcttcag 577
|| |||||||
Sbjct: 471 ctcgcttcag 480
>gb|CV766295.1|CV766295 FGAS060682 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 842
Score = 174 bits (88), Expect = 5e-042
Identities = 298/368 (80%), Gaps = 3/368 (0%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 444 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 503
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | | |||| ||||| |||||||||||||| || ||
Sbjct: 504 atgttttttgaggagattaaccatgcangagccggtggcatatgggcagaacttgttagt 563
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 564 aatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtctata 623
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| | ||||| ||| | | ||||| |||||| ||| | ||||||||||||||||||
Sbjct: 624 attggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaac 683
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
|| | ||||| |||||||| | ||||| |||| ||||| || || ||| |||||
Sbjct: 684 attatcgctcttaggatgganggtctctgtgatgaatgcccagccgggcgtg---gcatt 740
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 741 tacaaccctggggtctggggcatgaacatagaagatggaaagacctacaatctagttatg 800
Query: 502 tatgttaa 509
||||||||
Sbjct: 801 tatgttaa 808
>gb|DR735423.1|DR735423 FGAS081093 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 1137
Score = 165 bits (83), Expect = 4e-039
Identities = 295/365 (80%), Gaps = 3/365 (0%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 362 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 421
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 422 atgttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttagt 481
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||| | ||| | || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 482 aatagaggtattgaatctgggggactccatacaccatcaaatattgacccatggtctata 541
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| | ||||| ||| | | ||||| |||||| ||| | ||||||||||||||||||
Sbjct: 542 attggaaatgactcttccatatgtgtggcgactgaccgtacatcatgtttcagtcgaaac 601
Query: 382 atcgttgctctaaggatggaggtcctctgcaatgactgcccggctggcggtgttggcatt 441
|| | ||||| ||||||||||| ||||| |||| ||||| || |||| | |||||
Sbjct: 602 attatcgctcttaggatggaggttctctgtgatgaatgcccagccggcg---tcggcatc 658
Query: 442 tacaaccctggattctggggcatgaacatagaagatggaaagacatatcatctagttatg 501
|||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 659 tacatacctgggttctggggcatgaacatagaagatggaaagacctacaatctagttatg 718
Query: 502 tatgt 506
|||||
Sbjct: 719 tatgt 723
Score = 42.1 bits (21), Expect = 0.044
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 545 caagctctgatgggttgcagaatctggcttcag 577
|||||||||||| ||||||||| || |||||||
Sbjct: 762 caagctctgatgcgttgcagaagctcgcttcag 794
>gb|BF201535.1|BF201535 WHE1771_G01_M01ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE1771_G01_M01, mRNA sequence
Length = 474
Score = 159 bits (80), Expect = 3e-037
Identities = 181/214 (84%), Gaps = 3/214 (1%)
Strand = Plus / Plus
Query: 364 tcatgtttcagtcgaaacatcgttgctctaaggatggaggtcctctgcaatgactgcccg 423
|||||||||||||||||||| | ||||| ||||||||||| ||||| |||| |||||
Sbjct: 55 tcatgtttcagtcgaaacattatcgctcttaggatggaggttctctgtgatgaatgccca 114
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaagatggaaag 483
|| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 115 gccggcg---ttggcatttacaaccctgggttctggggcatgaacatagaagatggaaag 171
Query: 484 acatatcatctagttatgtatgttaagtcgccaaaaaccacatgcttgacagtttcgctg 543
|| || ||||||||||||||||||| || || || | || ||||||||||| |
Sbjct: 172 acctacaatctagttatgtatgttaaatcagcagaagctgcagatttgacagtttcatta 231
Query: 544 acaagctctgatgggttgcagaatctggcttcag 577
|||||||||||||||||||||| || |||||||
Sbjct: 232 gcaagctctgatgggttgcagaagctcgcttcag 265
>gb|BG909063.1|BG909063 TaLr1173F03R TaLr1 Triticum aestivum cDNA clone TaLr1173F03 5',
mRNA sequence
Length = 619
Score = 131 bits (66), Expect = 6e-029
Identities = 218/269 (81%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 340 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccagacacactgtttggg 399
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 400 atgttttttgaggagatcaaccatgcaggagccggtggcatatgggcagaacttgttagt 459
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 460 aatagaggttttgaagctggtggactccatacgccatcaaatattgacccatggtctata 519
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
| || |||||| | ||| | | ||||| |||||||||| | |||||||||| |||||||
Sbjct: 520 atcggagacgacgcttccatatttgtggtgactgatcgtacatcatgtttcantcgaaac 579
Query: 382 atcgttgctctaaggatggaggtcctctg 410
||| | ||||| ||||||||||| |||||
Sbjct: 580 atcatcgctcttaggatggaggttctctg 608
>gb|CD906901.1|CD906901 G468.105K13F011012 G468 Triticum aestivum cDNA clone G468105K13,
mRNA sequence
Length = 714
Score = 129 bits (65), Expect = 2e-028
Identities = 218/269 (81%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 418 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 477
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 478 atgttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttagt 537
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| |||
Sbjct: 538 aatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtccata 597
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| | ||||| ||| | | ||||| |||||| ||| | ||||||||||||||||||
Sbjct: 598 attggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaac 657
Query: 382 atcgttgctctaaggatggaggtcctctg 410
|| | ||||| ||||||||||| |||||
Sbjct: 658 attatcgctcttaggatggaggttctctg 686
>gb|BE471138.1|BE471138 WHE0284_C04_E08ZS Wheat drought-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0284_C04_E08, mRNA
sequence
Length = 575
Score = 107 bits (54), Expect = 9e-022
Identities = 195/242 (80%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 324 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 383
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 384 atgttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttagt 443
Query: 262 aacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatc 321
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 444 aatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtctata 503
Query: 322 gttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaac 381
|||| | ||||| ||| | | ||||| |||||| ||| | ||||||||||||||||||
Sbjct: 504 attggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaac 563
Query: 382 at 383
||
Sbjct: 564 at 565
>gb|CV774697.1|CV774697 FGAS069097 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 827
Score = 103 bits (52), Expect = 1e-020
Identities = 276/346 (79%), Gaps = 6/346 (1%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 484 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 543
Query: 202 gtg-ttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcag 260
|| || ||||||||||| ||| | |||||| ||||| |||||||||||||| || ||
Sbjct: 544 atgtttttttgaggagattaaccatgcaggagccggtggcatatgggcagaacttgttag 603
Query: 261 caacagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcat 320
|| |||||||| ||||| || || | | |||| ||||| || |||||||| ||| ||
Sbjct: 604 taatagaggttttgaagctgggggactccatacaccatcaaatattgacccatggtctat 663
Query: 321 cgttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaa 380
|||| | ||||| ||| | | ||||| |||||| ||| | |||||||||||||||||
Sbjct: 664 aattggaaatgactcttccatatttgtggcgactgaccgtacatcatgtttcagtcgaaa 723
Query: 381 catcgttgctct--aaggatggaggtcctctgcaatgactgcccggctggcggtgttggc 438
||| | ||||| | |||||||||| ||||| |||| ||||| || | || |||||
Sbjct: 724 cattatcgctcttaagggatggaggttctctgtgatgaatgcccagccg--ggcgttggg 781
Query: 439 a-tttacaaccctggattctggggcatgaacatagaagatggaaag 483
| ||||||||||||| ||||||||||| || | ||||||||||||
Sbjct: 782 attttacaaccctggggtctggggcatggaccttgaagatggaaag 827
>gb|BJ211530.1|BJ211530 BJ211530 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh31d04 5', mRNA sequence
Length = 351
Score = 89.7 bits (45), Expect = 2e-016
Identities = 138/169 (81%)
Strand = Plus / Plus
Query: 173 ctcgaaagatccccgatacattccttggggtgttctttgaggagatgggccacggaggag 232
||||||||||||| ||||| || |||| | || ||||||||||| ||| | |||||
Sbjct: 166 ctcgaaagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggag 225
Query: 233 ctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaata 292
||||||| |||||||||||||| || || || |||||||| ||||| ||||||||| |||
Sbjct: 226 ctggtggaatatgggcagaacttgttagtaatagaggttttgaagctggaggcccccata 285
Query: 293 ctccatcgaacattgacccctggctcatcgttggggacgactcctccgt 341
||||||| || ||||| || ||| |||| |||| || ||||| |||||
Sbjct: 286 ctccatcaaatattgagccatggtccatcattggagatgactcttccgt 334
>gb|CD890807.1|CD890807 G118.115H22F010719 G118 Triticum aestivum cDNA clone G118115H22,
mRNA sequence
Length = 700
Score = 89.7 bits (45), Expect = 2e-016
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 471 gctggcggtgttggtatttacaacccaggattctggggcatgaacatagaaga 523
Score = 54.0 bits (27), Expect = 1e-005
Identities = 156/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 250 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 309
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 310 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 369
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 370 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 429
Query: 383 tcgttgctctaaggatgga 401
| |||||||||||||||||
Sbjct: 430 tggttgctctaaggatgga 448
>gb|CA722273.1|CA722273 wds1c.pk003.j22.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.j22.f 3' end, mRNA sequence
Length = 544
Score = 87.7 bits (44), Expect = 8e-016
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 173 ctcgaaagatccccgatacattccttggggtgttctttgaggagatgggccacggaggag 232
||||||||||||| ||||| || |||| | || ||||||||||| ||| | |||||
Sbjct: 209 ctcgaaagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggag 268
Query: 233 ctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaata 292
||||||| |||||||||||||| || || || |||||||| ||||| ||||||||| |||
Sbjct: 269 ctggtggaatatgggcagaacttgttagtaatagaggttttgaagctggaggcccccata 328
Query: 293 ctccatcgaacattga 308
||||||| || |||||
Sbjct: 329 ctccatcaaatattga 344
>gb|CA722327.1|CA722327 wds1c.pk003.n24.f wds1c Triticum monococcum cDNA clone
wds1c.pk003.n24.f 3' end, mRNA sequence
Length = 533
Score = 87.7 bits (44), Expect = 8e-016
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 173 ctcgaaagatccccgatacattccttggggtgttctttgaggagatgggccacggaggag 232
||||||||||||| ||||| || |||| | || ||||||||||| ||| | |||||
Sbjct: 210 ctcgaaagatccctgatacgttgtttggaatattttttgaggagatcaaccatgcaggag 269
Query: 233 ctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaata 292
||||||| |||||||||||||| || || || |||||||| ||||| ||||||||| |||
Sbjct: 270 ctggtggaatatgggcagaacttgttagtaatagaggttttgaagctggaggcccccata 329
Query: 293 ctccatcgaacattga 308
||||||| || |||||
Sbjct: 330 ctccatcaaatattga 345
>gb|CD906900.1|CD906900 G468.105K13F010810 G468 Triticum aestivum cDNA clone G468105K13,
mRNA sequence
Length = 588
Score = 85.7 bits (43), Expect = 3e-015
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccccgatacattccttggg 201
||||||||||||||||||||| || ||||||| ||||||||||| || ||| | |||||
Sbjct: 415 accctcaaggttgatgcctcgtcacagcttgcccgaaagatcccggacacactgtttggg 474
Query: 202 gtgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagc 261
|||| ||||||||||| ||| | |||||| || || |||||||||||||| || ||
Sbjct: 475 atgttttttgaggagattaaccatgcaggagccgggggcatatgggcagaactagttagt 534
Query: 262 aacagaggttt 272
|| ||||||||
Sbjct: 535 aatagaggttt 545
>gb|BJ244366.1|BJ244366 BJ244366 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf9h01 5', mRNA sequence
Length = 683
Score = 81.8 bits (41), Expect = 5e-014
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 473 gctggcggtgttggtatttacaacccgggattctggggcatgaacatcgaaga 525
Score = 61.9 bits (31), Expect = 5e-008
Identities = 157/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 252 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 311
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 312 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 371
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 372 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 431
Query: 383 tcgttgctctaaggatgga 401
|||||||||||||||||||
Sbjct: 432 tcgttgctctaaggatgga 450
>gb|BQ238862.1|BQ238862 TaE05040C08R TaE05 Triticum aestivum cDNA clone TaE05040C08R, mRNA
sequence
Length = 631
Score = 81.8 bits (41), Expect = 5e-014
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 407 gctggcggtgttggtatttacaacccgggattctggggcatgaacatcgaaga 459
Score = 61.9 bits (31), Expect = 5e-008
Identities = 157/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 186 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 245
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 246 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 305
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 306 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 365
Query: 383 tcgttgctctaaggatgga 401
|||||||||||||||||||
Sbjct: 366 tcgttgctctaaggatgga 384
>gb|BQ239279.1|BQ239279 TaE05035A05R TaE05 Triticum aestivum cDNA clone TaE05035A05R, mRNA
sequence
Length = 633
Score = 81.8 bits (41), Expect = 5e-014
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 487 gctggcggtgttggtatttacaacccgggattctggggcatgaacatcgaaga 539
Score = 54.0 bits (27), Expect = 1e-005
Identities = 156/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 266 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 325
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 326 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 385
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 386 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 445
Query: 383 tcgttgctctaaggatgga 401
||| |||||||||||||||
Sbjct: 446 tcgctgctctaaggatgga 464
>gb|BQ239613.1|BQ239613 TaE05028G08R TaE05 Triticum aestivum cDNA clone TaE05028G08R, mRNA
sequence
Length = 558
Score = 81.8 bits (41), Expect = 5e-014
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 488 gctggcggtgttggtatttacaacccgggattctggggcatgaacatcgaaga 540
Score = 61.9 bits (31), Expect = 5e-008
Identities = 157/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 267 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 326
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 327 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 386
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 387 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 446
Query: 383 tcgttgctctaaggatgga 401
|||||||||||||||||||
Sbjct: 447 tcgttgctctaaggatgga 465
>gb|BQ240278.1|BQ240278 TaE05019G01R TaE05 Triticum aestivum cDNA clone TaE05019G01R, mRNA
sequence
Length = 651
Score = 81.8 bits (41), Expect = 5e-014
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 489 gctggcggtgttggtatttacaacccgggattctggggcatgaacatcgaaga 541
Score = 61.9 bits (31), Expect = 5e-008
Identities = 157/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 268 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 327
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 328 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 387
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 388 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 447
Query: 383 tcgttgctctaaggatgga 401
|||||||||||||||||||
Sbjct: 448 tcgttgctctaaggatgga 466
>gb|BQ241039.1|BQ241039 TaE05009H02R TaE05 Triticum aestivum cDNA clone TaE05009H02R, mRNA
sequence
Length = 662
Score = 81.8 bits (41), Expect = 5e-014
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatgaacatagaaga 476
|||||||||||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 484 gctggcggtgttggtatttacaacccgggattctggggcatgaacatcgaaga 536
Score = 61.9 bits (31), Expect = 5e-008
Identities = 157/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 263 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 322
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 323 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 382
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 383 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 442
Query: 383 tcgttgctctaaggatgga 401
|||||||||||||||||||
Sbjct: 443 tcgttgctctaaggatgga 461
>gb|BJ270298.1|BJ270298 BJ270298 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh6p07 5', mRNA sequence
Length = 577
Score = 69.9 bits (35), Expect = 2e-010
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattctggggcatga 466
|||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 454 gctggcggtgttggtatttacaacccaggattctggggcatga 496
Score = 54.0 bits (27), Expect = 1e-005
Identities = 156/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 233 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 292
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 293 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 352
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 353 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 412
Query: 383 tcgttgctctaaggatgga 401
| |||||||||||||||||
Sbjct: 413 tggttgctctaaggatgga 431
>gb|BQ620546.1|BQ620546 TaLr1146D03R TaLr1 Triticum aestivum cDNA clone TaLr1146D03R, mRNA
sequence
Length = 433
Score = 63.9 bits (32), Expect = 1e-008
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttgctcgaaagatccc 185
||||||||||||||||||||| || ||||||| |||||||||||
Sbjct: 376 accctcaaggttgatgcctcgtcacagcttgcccgaaagatccc 419
>gb|BG263791.1|BG263791 WHE2338_A11_A22ZS Wheat pre-anthesis spike cDNA library Triticum
aestivum cDNA clone WHE2338_A11_A22, mRNA sequence
Length = 411
Score = 61.9 bits (31), Expect = 5e-008
Identities = 157/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 157 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 216
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 217 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 276
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 277 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 336
Query: 383 tcgttgctctaaggatgga 401
|||||||||||||||||||
Sbjct: 337 tcgttgctctaaggatgga 355
Score = 52.0 bits (26), Expect = 5e-005
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 424 gctggcggtgttggcatttacaaccctggattct 457
|||||||||||||| ||||||||||| |||||||
Sbjct: 378 gctggcggtgttggtatttacaacccgggattct 411
>gb|BF473497.1|BF473497 WHE0929_A12_A23ZS Wheat 5-15 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0929_A12_A23, mRNA sequence
Length = 444
Score = 54.0 bits (27), Expect = 1e-005
Identities = 156/199 (78%)
Strand = Plus / Plus
Query: 203 tgttctttgaggagatgggccacggaggagctggtgggatatgggcagaactggtcagca 262
||||||||||||| || ||||| ||||||||||| | ||||| || || ||||| |
Sbjct: 226 tgttctttgaggaaatcaaccacgctggagctggtggattgtgggcggagcttgtcagta 285
Query: 263 acagaggtttcgaagcaggaggccccaatactccatcgaacattgacccctggctcatcg 322
|||||||||| ||||| ||||| || | ||||| || || || || || ||| ||||
Sbjct: 286 acagaggttttgaagctggagggccttacactccttcaaatatagatccatggtccatca 345
Query: 323 ttggggacgactcctccgtctatgtggagactgatcgttcgtcatgtttcagtcgaaaca 382
|||| ||||| |||||| | || ||| ||||||| | | || ||||||||| |||| |
Sbjct: 346 ttggtgacgaatcctccatatacgtgaagactgaaagagcatcttgtttcagtagaaata 405
Query: 383 tcgttgctctaaggatgga 401
| |||||||||||||||||
Sbjct: 406 tggttgctctaaggatgga 424
>gb|CA655728.1|CA655728 wlm0.pk0018.b8 wlm0 Triticum aestivum cDNA clone wlm0.pk0018.b8 5'
end, mRNA sequence
Length = 619
Score = 50.1 bits (25), Expect = 2e-004
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcct-cgccaaagcttgctcgaaagatccc 185
||||||||||||||||||| || || ||||||| |||||||||||
Sbjct: 154 accctcaaggttgatgcctccgtcacagcttgcccgaaagatccc 198
>gb|CV764552.1|CV764552 FGAS058937 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 896
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 142 accctcaaggttgatgcctcgccaaagcttg 172
||||||||||||||||||||| || ||||||
Sbjct: 285 accctcaaggttgatgcctcgtcacagcttg 315
>gb|BF293833.1|BF293833 WHE2153_E08_J15ZS Triticum turgidum L. var. durum (durum wheat)
whole plant cDNA library Triticum turgidum cDNA clone
WHE2153_E08_J15, mRNA sequence
Length = 498
Score = 40.1 bits (20), Expect = 0.17
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
||||||||| | ||||| ||||| || | || |||||||| ||||| || || || |||
Sbjct: 122 gctggtgggttgtgggccgaacttgtaaataatagaggttttgaagctggtggtcctaat 181
Query: 292 actccatcgaacattgaccc 311
||||| || |||||||||||
Sbjct: 182 actccttcaaacattgaccc 201
>gb|BJ280727.1|BJ280727 BJ280727 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr9n08 5', mRNA sequence
Length = 570
Score = 40.1 bits (20), Expect = 0.17
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
||||||||| | ||||| ||||| || | || |||||||| ||||| || || || |||
Sbjct: 196 gctggtgggttgtgggccgaacttgtaaataatagaggttttgaagctggtggtcctaat 255
Query: 292 actccatcgaacattgaccc 311
||||| || |||||||||||
Sbjct: 256 actccttcaaacattgaccc 275
>gb|CK161610.1|CK161610 FGAS014181 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1083
Score = 40.1 bits (20), Expect = 0.17
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
||||||||| | ||||| ||||| || | || |||||||| ||||| || || || |||
Sbjct: 248 gctggtgggttgtgggccgaacttgtaaataatagaggttttgaagctggtggtcctaat 307
Query: 292 actccatcgaacattgaccc 311
||||| || |||||||||||
Sbjct: 308 actccttcaaacattgaccc 327
>gb|CV772446.1|CV772446 FGAS066839 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 40.1 bits (20), Expect = 0.17
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 232 gctggtgggatatgggcagaactggtcagcaacagaggtttcgaagcaggaggccccaat 291
||||||||| | ||||| ||||| || | || |||||||| ||||| || || || |||
Sbjct: 119 gctggtgggttgtgggccgaacttgtaaataatagaggttttgaagctggtggtcctaat 178
Query: 292 actccatcgaacattgaccc 311
||||| || |||||||||||
Sbjct: 179 actccttcaaacattgaccc 198
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 109,130
Number of Sequences: 636343
Number of extensions: 109130
Number of successful extensions: 28963
Number of sequences better than 0.5: 39
Number of HSP's better than 0.5 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28854
Number of HSP's gapped (non-prelim): 91
length of query: 609
length of database: 367,240,239
effective HSP length: 19
effective length of query: 590
effective length of database: 355,149,722
effective search space: 209538335980
effective search space used: 209538335980
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)