BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AB021175.2.1
(1225 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: L... 305 4e-081
gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated se... 301 6e-080
gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed r... 274 1e-071
gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stresse... 274 1e-071
gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDN... 234 1e-059
gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aes... 220 2e-055
gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring whe... 194 1e-047
gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated... 123 3e-026
gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated se... 117 2e-024
gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed r... 100 4e-019
gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aest... 86 7e-015
gb|CK204531.1|CK204531 FGAS013067 Triticum aestivum FGAS: L... 86 7e-015
gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized c... 80 4e-013
gb|CA603765.1|CA603765 wr1.pk0032.h2 wr1 Triticum aestivum ... 78 2e-012
gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stresse... 74 3e-011
gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: L... 74 3e-011
gb|CA604179.1|CA604179 wr1.pk0044.c3 wr1 Triticum aestivum ... 72 1e-010
gb|CA614732.1|CA614732 wr1.pk175.f12 wr1 Triticum aestivum ... 72 1e-010
gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aes... 66 6e-009
gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed r... 62 1e-007
gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: L... 62 1e-007
gb|BQ162389.1|BQ162389 WHE0448_d06_h12zT Wheat etiolated se... 60 4e-007
gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated se... 58 2e-006
gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aesti... 58 2e-006
gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated... 58 2e-006
gb|CK194867.1|CK194867 FGAS003300 Triticum aestivum FGAS: L... 58 2e-006
gb|CA652901.1|CA652901 wre1n.pk172.g1 wre1n Triticum aestiv... 50 4e-004
gb|BE423611.1|BE423611 WHE0072_G07_M14ZS Wheat endosperm cD... 44 0.023
gb|BG908842.1|BG908842 TaLr1171F08R TaLr1 Triticum aestivum... 44 0.023
gb|BJ226730.1|BJ226730 BJ226730 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ271642.1|BJ271642 BJ271642 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ277912.1|BJ277912 BJ277912 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ280200.1|BJ280200 BJ280200 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ302755.1|BJ302755 BJ302755 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ315906.1|BJ315906 BJ315906 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ212098.1|BJ212098 BJ212098 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ223138.1|BJ223138 BJ223138 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ232807.1|BJ232807 BJ232807 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ292960.1|BJ292960 BJ292960 Y. Ogihara unpublished cDNA... 44 0.023
gb|BJ317137.1|BJ317137 BJ317137 Y. Ogihara unpublished cDNA... 44 0.023
gb|CA598735.1|CA598735 wyr1c.pk002.j5 wyr1c Triticum aestiv... 44 0.023
gb|CA628889.1|CA628889 wle1n.pk0009.a2 wle1n Triticum aesti... 44 0.023
gb|CA629571.1|CA629571 wle1n.pk0019.a4 wle1n Triticum aesti... 44 0.023
gb|CA664764.1|CA664764 wlk1.pk0007.c8 wlk1 Triticum aestivu... 44 0.023
gb|CA704255.1|CA704255 wdk1c.pk012.j4 wdk1c Triticum aestiv... 44 0.023
gb|CA716558.1|CA716558 wdk3c.pk026.d10 wdk3c Triticum aesti... 44 0.023
gb|CA729083.1|CA729083 wdi1c.pk007.o21 wdi1c Triticum aesti... 44 0.023
gb|CA741022.1|CA741022 wem1c.pk001.f11 wem1c Triticum aesti... 44 0.023
gb|CK197903.1|CK197903 FGAS006383 Triticum aestivum FGAS: L... 44 0.023
gb|CK198036.1|CK198036 FGAS006517 Triticum aestivum FGAS: L... 44 0.023
gb|CK204744.1|CK204744 FGAS013280 Triticum aestivum FGAS: L... 44 0.023
gb|CK205097.1|CK205097 FGAS013634 Triticum aestivum FGAS: L... 44 0.023
gb|BJ245281.1|BJ245281 BJ245281 Y. Ogihara unpublished cDNA... 42 0.089
gb|BU100960.1|BU100960 WHE3359_H08_O15ZS Chinese Spring alu... 42 0.089
gb|CA660903.1|CA660903 wlm1.pk0025.a10 wlm1 Triticum aestiv... 42 0.089
gb|CK200217.1|CK200217 FGAS008726 Triticum aestivum FGAS: L... 42 0.089
gb|CK206636.1|CK206636 FGAS018238 Triticum aestivum FGAS: L... 42 0.089
gb|CV768951.1|CV768951 FGAS063342 Triticum aestivum FGAS: L... 42 0.089
gb|BE426270.1|BE426270 WHE0330_G03_M06ZS Wheat unstressed s... 40 0.35
gb|BE497179.1|BE497179 WHE0765_C01_F01ZS Wheat heat-stresse... 40 0.35
gb|BF202803.1|BF202803 WHE1784_G07_M14ZS Wheat pre-anthesis... 40 0.35
gb|BF473415.1|BF473415 WHE0924_B09_D18ZS Wheat 5-15 DAP spi... 40 0.35
gb|BF474938.1|BF474938 WHE2101_H04_O07ZS Wheat salt-stresse... 40 0.35
gb|BG905679.1|BG905679 TaLr1141F04R TaLr1 Triticum aestivum... 40 0.35
gb|BJ211131.1|BJ211131 BJ211131 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ225041.1|BJ225041 BJ225041 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ247493.1|BJ247493 BJ247493 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ278367.1|BJ278367 BJ278367 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ313194.1|BJ313194 BJ313194 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ315924.1|BJ315924 BJ315924 Y. Ogihara unpublished cDNA... 40 0.35
gb|BQ483350.1|BQ483350 WHE3507_E10_J19ZS Wheat unstressed r... 40 0.35
gb|BQ753151.1|BQ753151 WHE4123_F05_L09ZS Wheat salt-stresse... 40 0.35
gb|BJ208188.1|BJ208188 BJ208188 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ212170.1|BJ212170 BJ212170 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ212430.1|BJ212430 BJ212430 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ212529.1|BJ212529 BJ212529 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ225224.1|BJ225224 BJ225224 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ226494.1|BJ226494 BJ226494 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ288004.1|BJ288004 BJ288004 Y. Ogihara unpublished cDNA... 40 0.35
gb|BJ312236.1|BJ312236 BJ312236 Y. Ogihara unpublished cDNA... 40 0.35
gb|CA595440.1|CA595440 wpa1c.pk009.l6 wpa1c Triticum aestiv... 40 0.35
gb|CA628809.1|CA628809 wle1n.pk0008.f6 wle1n Triticum aesti... 40 0.35
gb|CA631518.1|CA631518 wle1n.pk0048.b7 wle1n Triticum aesti... 40 0.35
gb|CA653991.1|CA653991 wre1n.pk189.f9 wre1n Triticum aestiv... 40 0.35
gb|CA656453.1|CA656453 wlm0.pk0036.e4 wlm0 Triticum aestivu... 40 0.35
gb|CA687479.1|CA687479 wlm96.pk036.b20 wlm96 Triticum aesti... 40 0.35
gb|CA706903.1|CA706903 wdk2c.pk0002.f6 wdk2c Triticum aesti... 40 0.35
gb|CA709330.1|CA709330 wdk2c.pk012.l22 wdk2c Triticum aesti... 40 0.35
gb|CA709461.1|CA709461 wdk2c.pk012.c8 wdk2c Triticum aestiv... 40 0.35
gb|CA726763.1|CA726763 wde1f.pk001.p17 wde1f Triticum aesti... 40 0.35
gb|CD864796.1|CD864796 AZO2.001L03F000630 AZO2 Triticum aes... 40 0.35
gb|CD931884.1|CD931884 GR45.115O15F010420 GR45 Triticum aes... 40 0.35
gb|CD938639.1|CD938639 OV.110I18F010312 OV Triticum aestivu... 40 0.35
gb|CK211714.1|CK211714 FGAS023568 Triticum aestivum FGAS: L... 40 0.35
>gb|CK195199.1|CK195199 FGAS003638 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 835
Score = 305 bits (154), Expect = 4e-081
Identities = 214/234 (91%)
Strand = Plus / Plus
Query: 276 gtgcccaagctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcga 335
||||||| |||||||||||| |||| | ||||||||||| ||||||||||||||||| ||
Sbjct: 430 gtgcccaggctgcaagacatactgcatctgcgacttctaccccggcgtgtcctgcgggga 489
Query: 336 cccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccggga 395
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 490 cccgcgcttcacgggcgccgacggcaacaacttctacttccacggcaaaaaggaccagag 549
Query: 396 cttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaa 455
|||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 550 cttctgtgtggtctccgacgccgatctccacatcaacgcccacttcatcggcaagcgcaa 609
Query: 456 cccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttcgc 509
||| |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 610 ccccgccatgagccgcgacttcacctggatccaggccctcggcatccgcttcgc 663
>gb|BE444358.1|BE444358 WHE1118_C01_E02ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 646
Score = 301 bits (152), Expect = 6e-080
Identities = 235/263 (89%)
Strand = Plus / Plus
Query: 276 gtgcccaagctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcga 335
||||||| |||||||||| | |||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 314 gtgcccaggctgcaagacctactgcatgtgcgacttctaccccggcgtgtcctgcggtga 373
Query: 336 cccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccggga 395
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 374 cccgcgcttcaccggcgccgacggcaacaacttctacttccacggcaagaaggaccagag 433
Query: 396 cttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaa 455
||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||
Sbjct: 434 cttctgcgtcgtctccgacgccgacctccacatcaacgcccacttcatcggcaagcgtaa 493
Query: 456 cccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttcgcgcacca 515
||| |||||||||| |||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 494 ccccaccatgagccgagacttcacctggatccaggccctcggcatccgctttgccgacca 553
Query: 516 ccacctctacgtcgccgcccaga 538
|| || ||| | ||||||||||
Sbjct: 554 ccgnctttacatggccgcccaga 576
>gb|BQ295218.1|BQ295218 WHE2867_E05_I09ZS Wheat unstressed root tip cDNA library Triticum
aestivum cDNA clone WHE2867_E05_I09, mRNA sequence
Length = 597
Score = 274 bits (138), Expect = 1e-071
Identities = 222/250 (88%)
Strand = Plus / Plus
Query: 276 gtgcccaagctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcga 335
||||||| |||||||||| | ||||||||| |||||||| || || || |||||||| ||
Sbjct: 131 gtgcccaggctgcaagacctactgcttgtgtgacttctaccctggtgtatcctgcggtga 190
Query: 336 cccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccggga 395
||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 191 cccccgcttcacgggggccgacggcaacaacttctacttccatggcaagaaggaccagga 250
Query: 396 cttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaa 455
|||||| || ||||||| || | ||||||||||||||| ||||||||||||||||||||
Sbjct: 251 cttctgtgtcctctccgatgctgacctccacatcaacgctcacttcatcggcaagcgcaa 310
Query: 456 cccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttcgcgcacca 515
||| |||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 311 ccccaccatgagccgtgacttcacatggatccaggctctgggcatccgcttcgctgacca 370
Query: 516 ccacctctac 525
|| |||||||
Sbjct: 371 ccgcctctac 380
>gb|BQ753058.1|BQ753058 WHE4122_E06_I12ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4122_E06_I12, mRNA sequence
Length = 695
Score = 274 bits (138), Expect = 1e-071
Identities = 222/250 (88%)
Strand = Plus / Plus
Query: 276 gtgcccaagctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcga 335
||||||| |||||||||| | ||||||||| |||||||| || || || |||||||| ||
Sbjct: 308 gtgcccaggctgcaagacctactgcttgtgtgacttctaccctggtgtatcctgcggtga 367
Query: 336 cccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccggga 395
||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 368 cccccgcttcacgggggccgacggcaacaacttctacttccatggcaagaaggaccagga 427
Query: 396 cttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaa 455
|||||| || ||||||| || | ||||||||||||||| ||||||||||||||||||||
Sbjct: 428 cttctgtgtcctctccgatgctgacctccacatcaacgctcacttcatcggcaagcgcaa 487
Query: 456 cccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttcgcgcacca 515
||| |||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||
Sbjct: 488 ccccaccatgagccgtgacttcacatggatccaggctctgggcatccgcttcgctgacca 547
Query: 516 ccacctctac 525
|| |||||||
Sbjct: 548 ccgcctctac 557
>gb|AL825643.1|AL825643 AL825643 p:234 Triticum aestivum cDNA clone A09_p234_plate_14, mRNA
sequence
Length = 526
Score = 234 bits (118), Expect = 1e-059
Identities = 205/234 (87%)
Strand = Plus / Plus
Query: 276 gtgcccaagctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcga 335
||||||| ||||||| || | |||| ||||||||||||| || || || |||||||| ||
Sbjct: 244 gtgcccaggctgcaaaacctactgcatgtgcgacttctacccgggagtatcctgcgggga 303
Query: 336 cccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccggga 395
||| |||||||||||||| || |||||||||||||||||||||||||| ||||||| |
Sbjct: 304 cccgcgcttcacgggcgctgatggcaacaacttctacttccacggcaaaaaggaccagag 363
Query: 396 cttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaa 455
||| || | ||||||||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 364 cttttgtgtggtctccgacgccgatctccagatcaacgcccacttcatcgggaagcgcaa 423
Query: 456 cccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttcgc 509
||| |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 424 ccccgccatgagccgcgacttcacctggatccaggccctcggcatccgcttcgc 477
>gb|CD872355.1|CD872355 AZO2.120H03F010209 AZO2 Triticum aestivum cDNA clone AZO2120H03,
mRNA sequence
Length = 704
Score = 220 bits (111), Expect = 2e-055
Identities = 183/207 (88%)
Strand = Plus / Plus
Query: 285 ctgcaagacattctgcttgtgcgacttctatcccggcgtgtcctgcggcgacccacgctt 344
||||| ||| |||||| |||| |||||||| | || | ||| ||||||||||| |||||
Sbjct: 344 ctgcatgaccttctgcctgtgtgacttctacgcgggggcgtcgtgcggcgacccgcgctt 403
Query: 345 cacgggcgccgacggcaacaacttctacttccacggcaagaaggaccgggacttctgcat 404
||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 404 caccggcggcgacggcaacaacttctacttccacggcaagaagaaccaggacttctgcat 463
Query: 405 cgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcgcaacccggccat 464
| ||||||||| || ||||||||||||||| |||||||||||||| | |||||| || |
Sbjct: 464 cctctccgacgacgacctccacatcaacgcccacttcatcggcaaccacaaccccgcgac 523
Query: 465 gagccgcgacttcacctggatccaggc 491
|||||||||||||||||||||||||||
Sbjct: 524 gagccgcgacttcacctggatccaggc 550
>gb|BU099866.1|BU099866 WHE3312_D05_H10ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3312_D05_H10,
mRNA sequence
Length = 633
Score = 194 bits (98), Expect = 1e-047
Identities = 176/202 (87%)
Strand = Plus / Plus
Query: 328 tgcggcgacccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaag 387
||||| ||||| |||||||| |||| |||||||||| ||||||||||||||||||||||
Sbjct: 374 tgcggagaccctcgcttcaccggcggggacggcaacaccttctacttccacggcaagaag 433
Query: 388 gaccgggacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggc 447
|||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 434 gaccaggacttctgcatcgtctccgacgaggccctccacatcaacgcccacttcatcggc 493
Query: 448 aagcgcaacccggccatgagccgcgacttcacctggatccaggcgctgggcatccgcttc 507
|| | |||||| ||||| || ||| ||||||| ||||||||||| | ||| || |||||
Sbjct: 494 aaccacaaccctgccataaggcgcaacttcacgtggatccaggccatcggcgtcagcttc 553
Query: 508 gcgcaccaccacctctacgtcg 529
| || |||| |||||||||||
Sbjct: 554 ggccagcaccgcctctacgtcg 575
>gb|CD452671.1|CD452671 WHE1118_C01_E02ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1118_C01_E02,
mRNA sequence
Length = 743
Score = 123 bits (62), Expect = 3e-026
Identities = 198/241 (82%), Gaps = 8/241 (3%)
Strand = Plus / Minus
Query: 742 gtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggc 801
||||||||||||| ||||||| || ||||||||||||||||| | |||||| ||| ||
Sbjct: 501 gtgcccatcaccgagaaggactcccgcatccacaactacggcgtgacggaggaagacagc 442
Query: 802 gacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcac 861
||||||||| ||||| | || ||||||||| ||| | |||| || || || |||
Sbjct: 441 ------ctcgcgcacttcgacattgggttcaagttccacgccttcacagatgatgtccac 388
Query: 862 ggcgtgctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaac 921
|| ||||| |||||||| |||||| ||||||||||||||| |||| ||| || |||||
Sbjct: 387 ggagtgctcggccagacgtaccgcacggactacgtcaacaagctcagcgtgaccgccaac 328
Query: 922 atgcccgtcatgggaggcg-cgccggactacctctcctccgacctcttctccaccgactg 980
|||||| ||||||| |||| |||| | |||| ||||||||||| ||||||||||||||||
Sbjct: 327 atgcccatcatgggcggcgccgccag-ctacgtctcctccgacatcttctccaccgactg 269
Query: 981 c 981
|
Sbjct: 268 c 268
>gb|BE407052.1|BE407052 WHE0448_d06_h12zS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0448_d06_h12, mRNA
sequence
Length = 474
Score = 117 bits (59), Expect = 2e-024
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 436 cacttcatcggcaagcgcaacccggccatgagccgcgacttcacctggatccaggcgctg 495
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 4 cacttcatcggcaagcgtaaccccaccatgagccgcgacttcacctggatccaggccctc 63
Query: 496 ggcatccgcttcgcgcaccaccacctctacgtcgccgcccaga 538
|||||||||||||| |||||| ||| ||| | ||||||||||
Sbjct: 64 ggcatccgcttcgccgaccaccgcctttacatggccgcccaga 106
Score = 89.7 bits (45), Expect = 4e-016
Identities = 131/160 (81%), Gaps = 6/160 (3%)
Strand = Plus / Plus
Query: 742 gtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggaggacgacggc 801
||||||||||||| |||||||||| ||||||||||| ||||| | |||||| ||| ||
Sbjct: 298 gtgcccatcaccgagaaggactcgcgcatccacaactatggcgtgacggaggaagacagc 357
Query: 802 gacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcac 861
||||||||| ||||| | || ||||||||| ||| | |||| || || || |||
Sbjct: 358 ------ctcgcgcacttcgacattgggttcaagttccacgccttcactgatgatgtccac 411
Query: 862 ggcgtgctgggccagacctaccgcccggactacgtcaaca 901
|| ||||| ||||||||||||||| |||||||||||||||
Sbjct: 412 ggagtgctcggccagacctaccgcacggactacgtcaaca 451
>gb|BQ483971.1|BQ483971 WHE3514_H12_O24ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H12_O24, mRNA sequence
Length = 775
Score = 99.6 bits (50), Expect = 4e-019
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 801 cgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgca 860
||||| ||||||||||||| || ||| ||||||||| || | ||| || |||||||||
Sbjct: 185 cgacagcctcgcgcacctcaacgtcgcattcaagttcaactccatcagcgccgacgtgca 244
Query: 861 cggcgtgctgggccagacctaccgcccggactacgtca 898
||||||||| ||||||||||||||||||||||||||||
Sbjct: 245 cggcgtgctcggccagacctaccgcccggactacgtca 282
>gb|CA643823.1|CA643823 wre1n.pk0080.h10 wre1n Triticum aestivum cDNA clone
wre1n.pk0080.h10 5' end, mRNA sequence
Length = 488
Score = 85.7 bits (43), Expect = 7e-015
Identities = 144/178 (80%), Gaps = 6/178 (3%)
Strand = Plus / Plus
Query: 721 ttccgcatcgtcgccagcgtagtgcccatcaccgccgaggactcgcggatccacaactac 780
|||||||||||||||| || ||||| | |||| ||||||||| |||||||| |||||
Sbjct: 56 ttccgcatcgtcgccaacgcggtgccggtgaccgaggaggactcgaggatccacgactac 115
Query: 781 ggcgtcagggaggacgacggcgacaccctcgcgcacctcgacctcggcttcaagttctac 840
||| ||| || || ||||| ||||||||||||| || ||| ||||||||| ||
Sbjct: 116 ggcctcac------cgccgacgacagcctcgcgcacctcaacgtcgcgttcaagttccac 169
Query: 841 gacctcaccgacgacgtgcacggcgtgctgggccagacctaccgcccggactacgtca 898
| ||| || |||||||||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 170 tccatcagcgccgacgtgcacggcgtgctcggccagacctaccgctccgactacgtca 227
>gb|CK204531.1|CK204531 FGAS013067 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 815
Score = 85.7 bits (43), Expect = 7e-015
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 333 cgacccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccg 392
|||||| |||||| ||||| |||||||||||| ||| |||||||||| | ||||
Sbjct: 488 cgacccgcgcttcgtgggcggcgacggcaacaagttcctcttccacggccgcagggacgc 547
Query: 393 ggacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcg 452
||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 548 cgacttctgcctgctctccgacgccnacctgcacatcaacgcgcacttcatcggcaagcg 607
Query: 453 ca 454
||
Sbjct: 608 ca 609
>gb|BE518372.1|BE518372 WHE0815_H07_P13ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0815_H07_P13, mRNA sequence
Length = 519
Score = 79.8 bits (40), Expect = 4e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 333 cgacccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaaggaccg 392
|||||| |||||| ||||| |||||||||||| ||| |||||||||| | ||||
Sbjct: 110 cgacccgcgcttcgtgggcggcgacggcaacaagttcctcttccacggccgcagggacgc 169
Query: 393 ggacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaagcg 452
||||||||| | |||||||| || ||| |||||||||||||||||||||||||||||
Sbjct: 170 cgacttctgcctgctctccgacaccaacctgcacatcaacgcgcacttcatcggcaagcg 229
Query: 453 caac 456
||||
Sbjct: 230 caac 233
Score = 42.1 bits (21), Expect = 0.089
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 472 gacttcacctggatccaggcgctgggcatccgcttcg 508
|||||||| ||| | |||||||| |||||||||||||
Sbjct: 249 gacttcacatgggtgcaggcgctcggcatccgcttcg 285
>gb|CA603765.1|CA603765 wr1.pk0032.h2 wr1 Triticum aestivum cDNA clone wr1.pk0032.h2 5'
end, mRNA sequence
Length = 224
Score = 77.8 bits (39), Expect = 2e-012
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 354 cgacggcaacaacttctacttccacggcaagaaggaccgggacttctgcatcgtctccga 413
||||||||||| |||||| ||||| || |||||||||| ||||||||| |||||| | ||
Sbjct: 90 cgacggcaacaccttctatttccanggnaagaaggaccaggacttctgtatcgtcnctga 149
Query: 414 cgccgccctccacatcaacgcgcacttcatcggcaa 449
| | || ||||||||||| ||||||| ||||||
Sbjct: 150 caaggnccnccacatcaacgnacacttcancggcaa 185
>gb|BQ743190.1|BQ743190 WHE4101_A11_A21ZS Wheat salt-stressed root cDNA library Triticum
aestivum cDNA clone WHE4101_A11_A21, mRNA sequence
Length = 587
Score = 73.8 bits (37), Expect = 3e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 394 gacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaag 450
||||||||| ||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 389 gacttctgcgtcgtctccgaccgcgaccttcacatcaacgcgcacttcatcggcaag 445
>gb|CK194135.1|CK194135 FGAS002554 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 808
Score = 73.8 bits (37), Expect = 3e-011
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 394 gacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaag 450
||||||||| ||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 512 gacttctgcgtcgtctccgaccgcgaccttcacatcaacgcgcacttcatcggcaag 568
>gb|CA604179.1|CA604179 wr1.pk0044.c3 wr1 Triticum aestivum cDNA clone wr1.pk0044.c3 5'
end, mRNA sequence
Length = 571
Score = 71.9 bits (36), Expect = 1e-010
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 800 gcgacaccctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgc 859
|||||| ||||| ||||||||||||||||||||||||| | ||||||| | ||||
Sbjct: 31 gcgacagcctcgtgcacctcgacctcggcttcaagttccattccctcaccaagaacgtcg 90
Query: 860 acggcgtgctgggccagacctacc 883
|||||||||| |||||||||||||
Sbjct: 91 acggcgtgctcggccagacctacc 114
>gb|CA614732.1|CA614732 wr1.pk175.f12 wr1 Triticum aestivum cDNA clone wr1.pk175.f12 5'
end, mRNA sequence
Length = 572
Score = 71.9 bits (36), Expect = 1e-010
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 852 cgacgtgcacggcgtgctgggccagacctaccgccc-ggactacgtca 898
|||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 49 cgacgtgcacggcgtgctcggccagacctaccgcccgggactacgtca 96
>gb|CD877614.1|CD877614 AZO4.100L12F010925 AZO4 Triticum aestivum cDNA clone AZO4100L12,
mRNA sequence
Length = 507
Score = 65.9 bits (33), Expect = 6e-009
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 394 gacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaag 450
||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 100 gacttctgcgtcgtctccgaccgggaccttcacatcaacgcgcacttcatcggcaag 156
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 472 gacttcacctggatccaggc 491
||||||||||||||||||||
Sbjct: 181 gacttcacctggatccaggc 200
>gb|BQ483963.1|BQ483963 WHE3514_H03_O06ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3514_H03_O06, mRNA sequence
Length = 684
Score = 61.9 bits (31), Expect = 1e-007
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 328 tgcggcgacccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaag 387
||||||||||| || |||| |||| ||||||||| ||||||||||||||| | |
Sbjct: 356 tgcggcgacccgcggttcataggcggtgacggcaacgccttctacttccacggacgcagg 415
Query: 388 gaccgggacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggc 447
||| ||||||||| ||||||||||| | ||| ||||||||||| ||||||||||||
Sbjct: 416 gacgccgacttctgcgtcgtctccgaccgtgaccttcacatcaacgcacacttcatcggc 475
Query: 448 aag 450
|||
Sbjct: 476 aag 478
>gb|CK200504.1|CK200504 FGAS009019 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 820
Score = 61.9 bits (31), Expect = 1e-007
Identities = 100/123 (81%)
Strand = Plus / Plus
Query: 328 tgcggcgacccacgcttcacgggcgccgacggcaacaacttctacttccacggcaagaag 387
||||||||||| || |||| |||| ||||||||| ||||||||||||||| | |
Sbjct: 451 tgcggcgacccgcggttcataggcggtgacggcaacgccttctacttccacggacgcagg 510
Query: 388 gaccgggacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggc 447
||| ||||||||| ||||||||||| | ||| ||||||||||| ||||||||||||
Sbjct: 511 gacgccgacttctgcgtcgtctccgaccgtgaccttcacatcaacgcacacttcatcggc 570
Query: 448 aag 450
|||
Sbjct: 571 aag 573
>gb|BQ162389.1|BQ162389 WHE0448_d06_h12zT Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE0448_d06_h12, mRNA
sequence
Length = 353
Score = 60.0 bits (30), Expect = 4e-007
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 917 ccaacatgcccgtcatgggaggcgc-gccggactacctctcctccgacctcttctccacc 975
||||||||||| ||||||| ||||| ||| | |||| ||||||||||| |||||||||||
Sbjct: 332 ccaacatgcccatcatgggcggcgccgccag-ctacgtctcctccgacatcttctccacc 274
Query: 976 gactgc 981
||||||
Sbjct: 273 gactgc 268
>gb|BE443370.1|BE443370 WHE1104_H10_P20ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 612
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 742 gtgcccatcaccgccgaggactcgcggatccacaactacgg 782
||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 217 gtgcccatcactgacgaggactcccggatccacaactacgg 257
Score = 50.1 bits (25), Expect = 4e-004
Identities = 142/181 (78%)
Strand = Plus / Plus
Query: 807 cctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggcgt 866
||||| ||||||||| ||||| ||||||||| || ||| || | | ||| |||||||
Sbjct: 276 cctcgtgcacctcgatctcgggttcaagttccacacccttacgaatgcggtggacggcgt 335
Query: 867 gctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaacatgcc 926
||| ||||||||||||| | | ||||| ||| || |||| ||||| |||| |||||
Sbjct: 336 gctcggccagacctaccactcaaactacatcagcaaggtcaatgtcacggccaagatgcc 395
Query: 927 cgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccgactgcgccgt 986
| | ||||| |||||||| | |||||||| || |||||||||||| |||||| ||||
Sbjct: 396 cataatgggcggcgcgcccaagtacctctcggccagcctcttctccacagactgcaccgt 455
Query: 987 c 987
|
Sbjct: 456 c 456
>gb|CA650372.1|CA650372 wre1n.pk0152.e6 wre1n Triticum aestivum cDNA clone wre1n.pk0152.e6
5' end, mRNA sequence
Length = 500
Score = 58.0 bits (29), Expect = 2e-006
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 394 gacttctgcatcgtctccgacgccgccctccacatcaacgcgcacttcatcggcaag 450
||||||||| ||||||||||| | ||| ||||||||||| |||||||||||||||
Sbjct: 56 gacttctgcgtcgtctccgaccgtgaccttcacatcaacgcacacttcatcggcaag 112
>gb|CD452458.1|CD452458 WHE1104_H10_P20ZT CS wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1104_H10_P20,
mRNA sequence
Length = 706
Score = 58.0 bits (29), Expect = 2e-006
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 742 gtgcccatcaccgccgaggactcgcggatccacaactacgg 782
||||||||||| | ||||||||| |||||||||||||||||
Sbjct: 522 gtgcccatcactgacgaggactcccggatccacaactacgg 482
Score = 50.1 bits (25), Expect = 4e-004
Identities = 142/181 (78%)
Strand = Plus / Minus
Query: 807 cctcgcgcacctcgacctcggcttcaagttctacgacctcaccgacgacgtgcacggcgt 866
||||| ||||||||| ||||| ||||||||| || ||| || | | ||| |||||||
Sbjct: 463 cctcgtgcacctcgatctcgggttcaagttccacacccttacgaatgcggtggacggcgt 404
Query: 867 gctgggccagacctaccgcccggactacgtcaacagcctcaacgtcacatccaacatgcc 926
||| ||||||||||||| | | ||||| ||| || |||| ||||| |||| |||||
Sbjct: 403 gctcggccagacctaccactcaaactacatcagcaaggtcaatgtcacggccaagatgcc 344
Query: 927 cgtcatgggaggcgcgccggactacctctcctccgacctcttctccaccgactgcgccgt 986
| | ||||| |||||||| | |||||||| || |||||||||||| |||||| ||||
Sbjct: 343 cataatgggcggcgcgcccaagtacctctcggccagcctcttctccacagactgcaccgt 284
Query: 987 c 987
|
Sbjct: 283 c 283
>gb|CK194867.1|CK194867 FGAS003300 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 863
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 833 agttctacgacctcaccgacgacgtgcacggcgtgctgggccagacctaccgc 885
||||| ||| |||||||||||||| || |||||||| |||||||||||||||
Sbjct: 531 agttccacggcctcaccgacgacgaccaaggcgtgctcggccagacctaccgc 479
>gb|CA652901.1|CA652901 wre1n.pk172.g1 wre1n Triticum aestivum cDNA clone wre1n.pk172.g1 5'
end, mRNA sequence
Length = 358
Score = 50.1 bits (25), Expect = 4e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 742 gtgcccatcaccgccgaggactcgcggatccacaactacggcgtcagggagga 794
||||||||||||| ||||||| || ||||||||||||||||| | ||||||
Sbjct: 145 gtgcccatcaccgagaaggactcccgcatccacaactacggcgtgacggagga 197
>gb|BE423611.1|BE423611 WHE0072_G07_M14ZS Wheat endosperm cDNA library Triticum aestivum
cDNA clone WHE0072_G07_M14, mRNA sequence
Length = 434
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 176 gtcgtcatggcggcggcggcgg 155
>gb|BG908842.1|BG908842 TaLr1171F08R TaLr1 Triticum aestivum cDNA clone TaLr1171F08 5',
mRNA sequence
Length = 687
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 196 gtcgtcatggcggcggcggcgg 175
>gb|BJ226730.1|BJ226730 BJ226730 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl18l04 5', mRNA sequence
Length = 601
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 177 gtcgtcatggcggcggcggcgg 156
>gb|BJ271642.1|BJ271642 BJ271642 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh26n22 5', mRNA sequence
Length = 629
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 169 gtcgtcatggcggcggcggcgg 148
>gb|BJ277912.1|BJ277912 BJ277912 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr13k13 5', mRNA sequence
Length = 478
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 94 gtcgtcatggcggcggcggcgg 73
>gb|BJ280200.1|BJ280200 BJ280200 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7a02 5', mRNA sequence
Length = 326
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 158 gtcgtcatggcggcggcggcgg 137
>gb|BJ302755.1|BJ302755 BJ302755 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd16k07 5', mRNA sequence
Length = 546
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 161 gtcgtcatggcggcggcggcgg 140
>gb|BJ315906.1|BJ315906 BJ315906 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf20l04 5', mRNA sequence
Length = 576
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 170 gtcgtcatggcggcggcggcgg 149
>gb|BJ212098.1|BJ212098 BJ212098 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh34m15 5', mRNA sequence
Length = 574
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 147 gtcgtcatggcggcggcggcgg 126
>gb|BJ223138.1|BJ223138 BJ223138 Y. Ogihara unpublished cDNA library, Wh_dL Triticum
aestivum cDNA clone whdl3a21 5', mRNA sequence
Length = 412
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 165 gtcgtcatggcggcggcggcgg 144
>gb|BJ232807.1|BJ232807 BJ232807 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe2b10 5', mRNA sequence
Length = 606
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 145 gtcgtcatggcggcggcggcgg 124
>gb|BJ292960.1|BJ292960 BJ292960 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl29o05 5', mRNA sequence
Length = 583
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 159 gtcgtcatggcggcggcggcgg 138
>gb|BJ317137.1|BJ317137 BJ317137 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf26i10 5', mRNA sequence
Length = 635
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 173 gtcgtcatggcggcggcggcgg 152
>gb|CA598735.1|CA598735 wyr1c.pk002.j5 wyr1c Triticum aestivum cDNA clone wyr1c.pk002.j5 5'
end, mRNA sequence
Length = 555
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 163 gtcgtcatggcggcggcggcgg 142
>gb|CA628889.1|CA628889 wle1n.pk0009.a2 wle1n Triticum aestivum cDNA clone wle1n.pk0009.a2
5' end, mRNA sequence
Length = 489
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 187 gtcgtcatggcggcggcggcgg 166
>gb|CA629571.1|CA629571 wle1n.pk0019.a4 wle1n Triticum aestivum cDNA clone wle1n.pk0019.a4
5' end, mRNA sequence
Length = 283
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 176 gtcgtcatggcggcggcggcgg 155
>gb|CA664764.1|CA664764 wlk1.pk0007.c8 wlk1 Triticum aestivum cDNA clone wlk1.pk0007.c8 5'
end, mRNA sequence
Length = 459
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 93 gtcgtcatggcggcggcggcgg 72
>gb|CA704255.1|CA704255 wdk1c.pk012.j4 wdk1c Triticum aestivum cDNA clone wdk1c.pk012.j4 5'
end, mRNA sequence
Length = 480
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 183 gtcgtcatggcggcggcggcgg 162
>gb|CA716558.1|CA716558 wdk3c.pk026.d10 wdk3c Triticum aestivum cDNA clone wdk3c.pk026.d10
5' end, mRNA sequence
Length = 408
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 177 gtcgtcatggcggcggcggcgg 156
>gb|CA729083.1|CA729083 wdi1c.pk007.o21 wdi1c Triticum aestivum cDNA clone wdi1c.pk007.o21
5' end, mRNA sequence
Length = 537
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 192 gtcgtcatggcggcggcggcgg 171
>gb|CA741022.1|CA741022 wem1c.pk001.f11 wem1c Triticum aestivum cDNA clone wem1c.pk001.f11
5' end, mRNA sequence
Length = 527
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 155 gtcgtcatggcggcggcggcgg 134
>gb|CK197903.1|CK197903 FGAS006383 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 220 gtcgtcatggcggcggcggcgg 199
>gb|CK198036.1|CK198036 FGAS006517 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 832
Score = 44.1 bits (22), Expect = 0.023
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 88 gtcgtcatggcggcggcggcgg 109
||||||||||||||||||||||
Sbjct: 283 gtcgtcatggcggcggcggcgg 262
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 634,167
Number of Sequences: 636343
Number of extensions: 634167
Number of successful extensions: 230620
Number of sequences better than 0.5: 94
Number of HSP's better than 0.5 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 230277
Number of HSP's gapped (non-prelim): 292
length of query: 1225
length of database: 367,240,239
effective HSP length: 20
effective length of query: 1205
effective length of database: 354,513,379
effective search space: 427188621695
effective search space used: 427188621695
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)