BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3024030.2.1
(412 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR740690.1|DR740690 FGAS000628 Triticum aestivum FGAS: L... 50 1e-004
gb|BG904320.1|BG904320 TaLr1131C02R TaLr1 Triticum aestivum... 48 5e-004
gb|CA660665.1|CA660665 wlm1.pk0024.d12 wlm1 Triticum aestiv... 48 5e-004
gb|CA680110.1|CA680110 wlm24.pk0001.h6 wlm24 Triticum aesti... 48 5e-004
gb|CA680185.1|CA680185 wlm24.pk0003.c9 wlm24 Triticum aesti... 48 5e-004
gb|CA692662.1|CA692662 wlm96.pk060.b11 wlm96 Triticum aesti... 48 5e-004
gb|CD873049.1|CD873049 AZO2.122E01R010522 AZO2 Triticum aes... 48 5e-004
gb|DR736271.1|DR736271 FGAS081641 Triticum aestivum FGAS: L... 48 5e-004
gb|CK200351.1|CK200351 FGAS008864 Triticum aestivum FGAS: L... 46 0.002
gb|CK210193.1|CK210193 FGAS021989 Triticum aestivum FGAS: L... 46 0.002
gb|CV770730.1|CV770730 FGAS065123 Triticum aestivum FGAS: L... 46 0.002
gb|BU672178.1|BU672178 WHE3301_E04_I07ZS Chinese Spring whe... 44 0.007
gb|CA624175.1|CA624175 wl1n.pk0115.b3 wl1n Triticum aestivu... 44 0.007
gb|CA655136.1|CA655136 wlm0.pk0010.e11 wlm0 Triticum aestiv... 44 0.007
gb|CF133904.1|CF133904 WHE4365_B01_D01ZT Wheat meiotic flor... 44 0.007
gb|CV774995.1|CV774995 FGAS069396 Triticum aestivum FGAS: L... 44 0.007
gb|CV778378.1|CV778378 FGAS072786 Triticum aestivum FGAS: L... 44 0.007
gb|CV779868.1|CV779868 FGAS074277 Triticum aestivum FGAS: L... 44 0.007
gb|BJ265537.1|BJ265537 BJ265537 Y. Ogihara unpublished cDNA... 42 0.029
gb|BJ285344.1|BJ285344 BJ285344 Y. Ogihara unpublished cDNA... 42 0.029
gb|BJ285364.1|BJ285364 BJ285364 Y. Ogihara unpublished cDNA... 42 0.029
gb|CA642913.1|CA642913 wre1n.pk0062.a3 wre1n Triticum aesti... 42 0.029
gb|CV763558.1|CV763558 FGAS057941 Triticum aestivum FGAS: L... 42 0.029
gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115... 42 0.029
gb|BE415565.1|BE415565 MWL035.D01000407 ITEC MWL Wheat Root... 40 0.12
gb|BQ166228.1|BQ166228 WHE0825-0828_C11_C11ZT Wheat vernali... 40 0.12
gb|CA666376.1|CA666376 wlk1.pk0018.h12 wlk1 Triticum aestiv... 40 0.12
gb|CA694483.1|CA694483 wlmk4.pk0017.g12 wlmk4 Triticum aest... 40 0.12
gb|CA731072.1|CA731072 wip1c.pk007.k17 wip1c Triticum aesti... 40 0.12
gb|CA741882.1|CA741882 wia1c.pk002.c4 wia1c Triticum aestiv... 40 0.12
gb|CD933017.1|CD933017 GR45.119K08F010719 GR45 Triticum aes... 40 0.12
gb|CV759340.1|CV759340 FGAS053723 Triticum aestivum FGAS: L... 40 0.12
gb|DR731624.1|DR731624 FGAS077544 Triticum aestivum FGAS: T... 40 0.12
gb|BF293876.1|BF293876 WHE2253_A10_B19ZE Triticum monococcu... 38 0.46
gb|BQ788786.1|BQ788786 WHE4153_G11_N21ZS Wheat CS whole pla... 38 0.46
gb|CA593291.1|CA593291 wpa1c.pk003.d10 wpa1c Triticum aesti... 38 0.46
gb|CD492045.1|CD492045 WHE2461_D04_H07ZT Triticum monococcu... 38 0.46
gb|CD908912.1|CD908912 G468.111E21R010929 G468 Triticum aes... 38 0.46
gb|CD930999.1|CD930999 GR45.113C16F010419 GR45 Triticum aes... 38 0.46
gb|CK199407.1|CK199407 FGAS007903 Triticum aestivum FGAS: L... 38 0.46
gb|CV764477.1|CV764477 FGAS058862 Triticum aestivum FGAS: L... 38 0.46
gb|CV779823.1|CV779823 FGAS074232 Triticum aestivum FGAS: L... 38 0.46
>gb|DR740690.1|DR740690 FGAS000628 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaag 39
|||||||||||||||||||||||||
Sbjct: 8 caaaccaaaccaaaccaaaccaaag 32
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 7 ccaaaccaaaccaaaccaaa 26
>gb|BG904320.1|BG904320 TaLr1131C02R TaLr1 Triticum aestivum cDNA clone TaLr1131C02 5',
mRNA sequence
Length = 582
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 32 caaaccaaaccaaaccaaaccaaa 55
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 37 caaaccaaaccaaaccaaacc 57
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 31 ccaaaccaaaccaaaccaaa 50
>gb|CA660665.1|CA660665 wlm1.pk0024.d12 wlm1 Triticum aestivum cDNA clone wlm1.pk0024.d12
5' end, mRNA sequence
Length = 457
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 41 caaaccaaaccaaaccaaaccaaa 64
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 46 caaaccaaaccaaaccaaacc 66
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 40 ccaaaccaaaccaaaccaaa 59
>gb|CA680110.1|CA680110 wlm24.pk0001.h6 wlm24 Triticum aestivum cDNA clone
wlm24.pk0001.h6 5' end, mRNA sequence
Length = 688
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 50 caaaccaaaccaaaccaaaccaaa 73
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 55 caaaccaaaccaaaccaaacc 75
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 49 ccaaaccaaaccaaaccaaa 68
>gb|CA680185.1|CA680185 wlm24.pk0003.c9 wlm24 Triticum aestivum cDNA clone
wlm24.pk0003.c9 5' end, mRNA sequence
Length = 502
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 71 caaaccaaaccaaaccaaaccaaa 94
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 76 caaaccaaaccaaaccaaacc 96
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 70 ccaaaccaaaccaaaccaaa 89
>gb|CA692662.1|CA692662 wlm96.pk060.b11 wlm96 Triticum aestivum cDNA clone wlm96.pk060.b11
5' end, mRNA sequence
Length = 450
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 82 caaaccaaaccaaaccaaaccaaa 105
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 87 caaaccaaaccaaaccaaacc 107
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 81 ccaaaccaaaccaaaccaaa 100
>gb|CD873049.1|CD873049 AZO2.122E01R010522 AZO2 Triticum aestivum cDNA clone AZO2122E01,
mRNA sequence
Length = 483
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 102 caaaccaaaccaaaccaaaccaaa 125
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 107 caaaccaaaccaaaccaaacc 127
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 101 ccaaaccaaaccaaaccaaa 120
>gb|DR736271.1|DR736271 FGAS081641 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 949
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||||
Sbjct: 106 caaaccaaaccaaaccaaaccaaa 129
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 111 caaaccaaaccaaaccaaacc 131
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 105 ccaaaccaaaccaaaccaaa 124
>gb|CK200351.1|CK200351 FGAS008864 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 849
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaa 37
|||||||||||||||||||||||
Sbjct: 203 caaaccaaaccaaaccaaaccaa 225
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 202 ccaaaccaaaccaaaccaaa 221
>gb|CK210193.1|CK210193 FGAS021989 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1124
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 aaccaaaccaaaccaaaccaaag 39
|||||||||||||||||||||||
Sbjct: 37 aaccaaaccaaaccaaaccaaag 59
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaa 33
|||||||||||||||||||
Sbjct: 40 caaaccaaaccaaaccaaa 58
>gb|CV770730.1|CV770730 FGAS065123 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 848
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 aaccaaaccaaaccaaaccaaag 39
|||||||||||||||||||||||
Sbjct: 108 aaccaaaccaaaccaaaccaaag 130
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaa 33
|||||||||||||||||||
Sbjct: 111 caaaccaaaccaaaccaaa 129
>gb|BU672178.1|BU672178 WHE3301_E04_I07ZS Chinese Spring wheat drought stressed root cDNA
library Triticum aestivum cDNA clone WHE3301_E04_I07,
mRNA sequence
Length = 443
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 aaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||
Sbjct: 287 aaccaaaccaaaccaaaccaaa 308
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 290 caaaccaaaccaaaccaaacc 310
>gb|CA624175.1|CA624175 wl1n.pk0115.b3 wl1n Triticum aestivum cDNA clone wl1n.pk0115.b3 5'
end, mRNA sequence
Length = 521
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 aaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||
Sbjct: 212 aaccaaaccaaaccaaaccaaa 233
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 215 caaaccaaaccaaaccaaacc 235
>gb|CA655136.1|CA655136 wlm0.pk0010.e11 wlm0 Triticum aestivum cDNA clone wlm0.pk0010.e11
5' end, mRNA sequence
Length = 570
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacca 36
||||||||||||||||||||||
Sbjct: 46 caaaccaaaccaaaccaaacca 67
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 45 ccaaaccaaaccaaaccaaa 64
>gb|CF133904.1|CF133904 WHE4365_B01_D01ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4365_B01_D01, mRNA sequence
Length = 757
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacca 36
||||||||||||||||||||||
Sbjct: 243 caaaccaaaccaaaccaaacca 264
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 aaccaaaccaaaccaaaccaaa 38
||||||||||||||||||||||
Sbjct: 240 aaccaaaccaaaccaaaccaaa 261
>gb|CV774995.1|CV774995 FGAS069396 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 824
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacca 36
||||||||||||||||||||||
Sbjct: 138 caaaccaaaccaaaccaaacca 159
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 137 ccaaaccaaaccaaaccaaa 156
>gb|CV778378.1|CV778378 FGAS072786 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 844
Score = 44.1 bits (22), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 caaaccaaaccaaaccaaagaactca 45
||||||||||||||||||||| ||||
Sbjct: 107 caaaccaaaccaaaccaaagatctca 132
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaa 33
|||||||||||||||||||
Sbjct: 107 caaaccaaaccaaaccaaa 125
>gb|CV779868.1|CV779868 FGAS074277 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 843
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacca 36
||||||||||||||||||||||
Sbjct: 149 caaaccaaaccaaaccaaacca 170
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 148 ccaaaccaaaccaaaccaaa 167
>gb|BJ265537.1|BJ265537 BJ265537 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22f22 3', mRNA sequence
Length = 683
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 153 caaaccaaaccaaaccaaacc 173
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 152 ccaaaccaaaccaaaccaaa 171
>gb|BJ285344.1|BJ285344 BJ285344 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7l23 3', mRNA sequence
Length = 679
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 99 caaaccaaaccaaaccaaacc 119
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 98 ccaaaccaaaccaaaccaaa 117
>gb|BJ285364.1|BJ285364 BJ285364 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr7n13 3', mRNA sequence
Length = 466
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 35 caaaccaaaccaaaccaaacc 55
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 34 ccaaaccaaaccaaaccaaa 53
>gb|CA642913.1|CA642913 wre1n.pk0062.a3 wre1n Triticum aestivum cDNA clone wre1n.pk0062.a3
5' end, mRNA sequence
Length = 236
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 133 caaaccaaaccaaaccaaacc 113
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 134 ccaaaccaaaccaaaccaaa 115
>gb|CV763558.1|CV763558 FGAS057941 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 828
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaacc 35
|||||||||||||||||||||
Sbjct: 497 caaaccaaaccaaaccaaacc 517
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 496 ccaaaccaaaccaaaccaaa 515
>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
Length = 215241
Score = 42.1 bits (21), Expect = 0.029
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaacca 36
|||||||||||||||||||||
Sbjct: 188190 aaaccaaaccaaaccaaacca 188170
>gb|BE415565.1|BE415565 MWL035.D01000407 ITEC MWL Wheat Root Library Triticum aestivum cDNA
clone MWL035.D01, mRNA sequence
Length = 309
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 151 ccaaaccaaaccaaaccaaa 132
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaa 33
|||||||||||||||||||
Sbjct: 150 caaaccaaaccaaaccaaa 132
>gb|BQ166228.1|BQ166228 WHE0825-0828_C11_C11ZT Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0825-0828_C11_C11, mRNA sequence
Length = 548
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 ccaaaccaaaccaaaccaaa 38
||||||||||||||||||||
Sbjct: 407 ccaaaccaaaccaaaccaaa 388
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaa 33
|||||||||||||||||||
Sbjct: 406 caaaccaaaccaaaccaaa 388
>gb|CA666376.1|CA666376 wlk1.pk0018.h12 wlk1 Triticum aestivum cDNA clone wlk1.pk0018.h12
5' end, mRNA sequence
Length = 504
Score = 40.1 bits (20), Expect = 0.12
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||| ||||||
Sbjct: 28 caaaccaaaccaaaccagaccaaa 51
>gb|CA694483.1|CA694483 wlmk4.pk0017.g12 wlmk4 Triticum aestivum cDNA clone
wlmk4.pk0017.g12 5' end, mRNA sequence
Length = 615
Score = 40.1 bits (20), Expect = 0.12
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||| ||||||
Sbjct: 31 caaaccaaaccaaaccagaccaaa 54
>gb|CA731072.1|CA731072 wip1c.pk007.k17 wip1c Triticum aestivum cDNA clone
wip1c.pk007.k17 5' end, mRNA sequence
Length = 582
Score = 40.1 bits (20), Expect = 0.12
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||| ||||||
Sbjct: 46 caaaccaaaccaaaccagaccaaa 69
>gb|CA741882.1|CA741882 wia1c.pk002.c4 wia1c Triticum aestivum cDNA clone wia1c.pk002.c4
5' end, mRNA sequence
Length = 607
Score = 40.1 bits (20), Expect = 0.12
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||| ||||||
Sbjct: 46 caaaccaaaccaaaccagaccaaa 69
>gb|CD933017.1|CD933017 GR45.119K08F010719 GR45 Triticum aestivum cDNA clone GR45119K08,
mRNA sequence
Length = 213
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaacc 35
||||||||||||||||||||
Sbjct: 90 aaaccaaaccaaaccaaacc 71
>gb|CV759340.1|CV759340 FGAS053723 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 813
Score = 40.1 bits (20), Expect = 0.12
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 caaaccaaaccaaaccaaaccaaa 38
||||||||||||||||| ||||||
Sbjct: 146 caaaccaaaccaaaccagaccaaa 169
>gb|DR731624.1|DR731624 FGAS077544 Triticum aestivum FGAS: TaLt2 Triticum aestivum cDNA,
mRNA sequence
Length = 855
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 18 accaaaccaaaccaaaccaa 37
||||||||||||||||||||
Sbjct: 334 accaaaccaaaccaaaccaa 315
>gb|BF293876.1|BF293876 WHE2253_A10_B19ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE2253_A10_B19, mRNA
sequence
Length = 328
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaac 34
|||||||||||||||||||
Sbjct: 131 aaaccaaaccaaaccaaac 113
>gb|BQ788786.1|BQ788786 WHE4153_G11_N21ZS Wheat CS whole plant cDNA library Triticum
aestivum cDNA clone WHE4153_G11_N21, mRNA sequence
Length = 747
Score = 38.2 bits (19), Expect = 0.46
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 15 caaaccaaaccaaaccaaaccaa 37
||||||||||||| |||||||||
Sbjct: 283 caaaccaaaccaagccaaaccaa 261
>gb|CA593291.1|CA593291 wpa1c.pk003.d10 wpa1c Triticum aestivum cDNA clone
wpa1c.pk003.d10 5' end, mRNA sequence
Length = 279
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 21 aaaccaaaccaaaccaaag 39
|||||||||||||||||||
Sbjct: 2 aaaccaaaccaaaccaaag 20
>gb|CD492045.1|CD492045 WHE2461_D04_H07ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2461_D04_H07, mRNA sequence
Length = 765
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 14 acaaaccaaaccaaaccaa 32
|||||||||||||||||||
Sbjct: 455 acaaaccaaaccaaaccaa 473
>gb|CD908912.1|CD908912 G468.111E21R010929 G468 Triticum aestivum cDNA clone G468111E21,
mRNA sequence
Length = 674
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 16 aaaccaaaccaaaccaaac 34
|||||||||||||||||||
Sbjct: 117 aaaccaaaccaaaccaaac 135
>gb|CD930999.1|CD930999 GR45.113C16F010419 GR45 Triticum aestivum cDNA clone GR45113C16,
mRNA sequence
Length = 699
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 16 aaaccaaaccaaaccaaac 34
|||||||||||||||||||
Sbjct: 473 aaaccaaaccaaaccaaac 455
>gb|CK199407.1|CK199407 FGAS007903 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 823
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 21 aaaccaaaccaaaccaaag 39
|||||||||||||||||||
Sbjct: 118 aaaccaaaccaaaccaaag 136
>gb|CV764477.1|CV764477 FGAS058862 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 846
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaacca 36
|||||||||||||||||||
Sbjct: 111 accaaaccaaaccaaacca 129
>gb|CV779823.1|CV779823 FGAS074232 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 841
Score = 38.2 bits (19), Expect = 0.46
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 18 accaaaccaaaccaaacca 36
|||||||||||||||||||
Sbjct: 109 accaaaccaaaccaaacca 127
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 88,327
Number of Sequences: 636343
Number of extensions: 88327
Number of successful extensions: 23034
Number of sequences better than 0.5: 42
Number of HSP's better than 0.5 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22839
Number of HSP's gapped (non-prelim): 122
length of query: 412
length of database: 367,240,239
effective HSP length: 19
effective length of query: 393
effective length of database: 355,149,722
effective search space: 139573840746
effective search space used: 139573840746
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)