BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS9a01.xg.2.1
(480 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle... 724 0.0
gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle... 535 e-150
gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (L... 525 e-147
gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Me... 498 e-139
gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stres... 464 e-129
gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle... 373 e-101
gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/c... 133 2e-029
gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots S... 115 4e-024
gb|CW036402.1|CW036402 104_267_10503738_114_30374 Sorghum m... 111 6e-023
gb|CW096979.1|CW096979 104_462_11002200_116_34349_082 Sorgh... 111 6e-023
gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorgh... 111 6e-023
gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation... 111 6e-023
gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation... 109 2e-022
gb|CL151120.1|CL151120 104_333_10779023_116_31360_191 Sorgh... 103 1e-020
gb|CW103828.1|CW103828 104_472_11012098_148_34437_037 Sorgh... 103 1e-020
gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorgh... 80 2e-013
gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorgh... 80 2e-013
gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorgh... 80 2e-013
gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (L... 74 1e-011
gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorgh... 62 5e-008
gb|CW372021.1|CW372021 fsbb001f047l20f0 Sorghum methylation... 62 5e-008
gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation... 62 5e-008
gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated... 62 5e-008
gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb prot... 62 5e-008
gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed see... 60 2e-007
gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves... 58 8e-007
gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorgh... 56 3e-006
gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots ... 56 3e-006
gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb prot... 54 1e-005
gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb prot... 54 1e-005
gb|CW154932.1|CW154932 104_557_11145867_116_36359_012 Sorgh... 52 5e-005
gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorgh... 52 5e-005
gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorgh... 52 5e-005
gb|CW276952.1|CW276952 104_750_11405764_148_35399_002 Sorgh... 52 5e-005
gb|CW338064.1|CW338064 104_838_11484544_116_36125_060 Sorgh... 52 5e-005
gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorgh... 52 5e-005
gb|CW172349.1|CW172349 104_583_11156244_148_36539_040 Sorgh... 48 7e-004
gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorgh... 48 7e-004
gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seed... 48 7e-004
gb|CW065792.1|CW065792 104_312_10523339_115_30130 Sorghum m... 46 0.003
gb|CW235373.1|CW235373 104_690_11214948_116_37410_038 Sorgh... 46 0.003
gb|CW377165.1|CW377165 fsbb001f055f22f0 Sorghum methylation... 46 0.003
gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots ... 46 0.003
gb|CW258078.1|CW258078 104_723_11227682_116_35159_001 Sorgh... 44 0.012
gb|CW310980.1|CW310980 104_800_11469995_148_35755_042 Sorgh... 44 0.012
gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorgh... 42 0.046
gb|CW045801.1|CW045801 104_282_10509787_114_30228 Sorghum m... 40 0.18
gb|CW066615.1|CW066615 104_313_10523776_114_30148 Sorghum m... 40 0.18
gb|CW266637.1|CW266637 104_736_11232538_148_35286_039 Sorgh... 40 0.18
gb|CW310158.1|CW310158 104_799_11469571_116_37434_076 Sorgh... 40 0.18
gb|CW449861.1|CW449861 fsbb001f188d08k0 Sorghum methylation... 40 0.18
gb|CW454633.1|CW454633 fsbb001f199c24k0 Sorghum methylation... 40 0.18
gb|CW039028.1|CW039028 104_271_10505257_114_30387 Sorghum m... 38 0.71
gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum m... 38 0.71
gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorgh... 38 0.71
gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorgh... 38 0.71
gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorgh... 38 0.71
gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorgh... 38 0.71
gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation... 38 0.71
gb|CW363914.1|CW363914 fsbb001f035l18k0 Sorghum methylation... 38 0.71
gb|CW377249.1|CW377249 fsbb001f055h19f0 Sorghum methylation... 38 0.71
gb|CW377250.1|CW377250 fsbb001f055h19k0 Sorghum methylation... 38 0.71
gb|AW285644.1|AW285644 LG1_319_E08.g1_A002 Light Grown 1 (L... 38 0.71
gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassino... 38 0.71
gb|CX614961.1|CX614961 GABR1_17_G10.b1_A002 GA- or brassino... 38 0.71
gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassino... 38 0.71
gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassino... 38 0.71
gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb prot... 38 0.71
gb|CW055923.1|CW055923 104_297_10517404_114_30172 Sorghum m... 36 2.8
gb|CW057439.1|CW057439 104_299_10518224_114_30169 Sorghum m... 36 2.8
gb|CW061022.1|CW061022 104_304_10520176_114_30143 Sorghum m... 36 2.8
gb|CW078375.1|CW078375 104_392_10896644_148_31925_020 Sorgh... 36 2.8
gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorgh... 36 2.8
gb|CW171329.1|CW171329 104_582_11155681_116_36525_013 Sorgh... 36 2.8
gb|CW210095.1|CW210095 104_640_11189612_116_37000_074 Sorgh... 36 2.8
gb|CW210096.1|CW210096 104_640_11189612_148_36999_074 Sorgh... 36 2.8
gb|CW227380.1|CW227380 104_665_11205385_116_37227_003 Sorgh... 36 2.8
gb|CW235207.1|CW235207 104_690_11214858_148_37414_073 Sorgh... 36 2.8
gb|CW237814.1|CW237814 104_694_11216380_116_37489_010 Sorgh... 36 2.8
gb|CW237815.1|CW237815 104_694_11216380_148_37490_010 Sorgh... 36 2.8
gb|CW268204.1|CW268204 104_738_11401152_148_35300_084 Sorgh... 36 2.8
gb|CW272684.1|CW272684 104_745_11403514_116_35718_047 Sorgh... 36 2.8
gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorgh... 36 2.8
gb|CW364997.1|CW364997 fsbb001f037f01f0 Sorghum methylation... 36 2.8
gb|CW409937.1|CW409937 fsbb001f104h15f0 Sorghum methylation... 36 2.8
gb|CW409938.1|CW409938 fsbb001f104h15k0 Sorghum methylation... 36 2.8
gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation... 36 2.8
gb|CW414654.1|CW414654 fsbb001f114g17k0 Sorghum methylation... 36 2.8
gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation... 36 2.8
gb|CW467626.1|CW467626 fsbb001f219g10f0 Sorghum methylation... 36 2.8
gb|CW467627.1|CW467627 fsbb001f219g10k0 Sorghum methylation... 36 2.8
gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation... 36 2.8
gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seed... 36 2.8
gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stres... 36 2.8
gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves... 36 2.8
gb|CX608328.1|CX608328 ANR1_38_A10.b1_A002 Anaerobic roots ... 36 2.8
gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb prot... 36 2.8
gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb prot... 36 2.8
gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb... 36 2.8
>gb|BI098957.1|BI098957 IP1_35_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 724 bits (365), Expect = 0.0
Identities = 446/473 (94%)
Strand = Plus / Plus
Query: 8 cattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggt 67
||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 22 cattctcccaagacgaagaagagctcatcattgagctgcacgctgtcctcggaaacaggt 81
Query: 68 ggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ggtctcaaattgcagcacagctgccagggaggactgataatgagatcaagaatctatgga 141
Query: 128 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagccac 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 142 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcccc 201
Query: 188 ttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaacctcagggt 247
||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 202 ttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgagagaacctcagggt 261
Query: 248 ccagcgacatcaacccatcaagcactggtcctctggggaacttgagccccctcctcagcg 307
||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||
Sbjct: 262 ccagcgatgtcaacccatcaagtgctggtgctctggggaacttgagccacctcctcagcg 321
Query: 308 agacggctcaatcatcaatgctgatgcccgtgtacgacaagaatcgtgctgaaacaccaa 367
||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| || |
Sbjct: 322 agacggctcaatcatcaatgctgatgcccatgtatgacaagaatcgcactgaaactccga 381
Query: 368 acttggcacgccctaagctgccaccaaaggagctgttcctggagcagcttactgctggac 427
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 382 acttggcacgccctaaggtgccaccaaaagagttgttcctggagcagcttactgctggac 441
Query: 428 acgagagtccatcaacctgccactcatcaggccaaactctctatttccctttc 480
||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 442 acgagagtccatcaacctgccgctcatcaggccagactctctatttccctttc 494
>gb|BI098805.1|BI098805 IP1_33_D12.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 387
Score = 535 bits (270), Expect = e-150
Identities = 342/366 (93%)
Strand = Plus / Plus
Query: 8 cattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggt 67
||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 22 cattctcccaagacgaagaagagctcatcattgagctgcacgctgtcctcggaaacaggt 81
Query: 68 ggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ggtctcaaattgcagcacagctgccagggaggactgataatgagatcaagaatctatgga 141
Query: 128 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagccac 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 142 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcccc 201
Query: 188 ttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaacctcagggt 247
||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 202 ttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgagagaacctcagggt 261
Query: 248 ccagcgacatcaacccatcaagcactggtcctctggggaacttgagccccctcctcagcg 307
||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||
Sbjct: 262 ccagcgatgtcaacccatcaagtgctggtgctctggggaacttgagccacctcctcagcg 321
Query: 308 agacggctcaatcatcaatgctgatgcccgtgtacgacaagaatcgtgctgaaacaccaa 367
||||||||||||||||||||||||||||| |||| || ||||||| ||||||| || |
Sbjct: 322 agacggctcaatcatcaatgctgatgcccatgtatgagcagaatcgcactgaaactccga 381
Query: 368 acttgg 373
||||||
Sbjct: 382 acttgg 387
>gb|AW672062.1|AW672062 LG1_354_G05.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 601
Score = 525 bits (265), Expect = e-147
Identities = 313/329 (95%)
Strand = Plus / Plus
Query: 8 cattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggt 67
||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 273 cattctcccaagacgaagaagagctcatcattgagctgcacgctgtcctcggaaacaggt 332
Query: 68 ggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggtctcaaattgcagcacagctgccagggaggactgataatgagatcaagaatctatgga 392
Query: 128 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagccac 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 393 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcccc 452
Query: 188 ttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaacctcagggt 247
||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 453 ttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgagagaacctcagggt 512
Query: 248 ccagcgacatcaacccatcaagcactggtcctctggggaacttgagccccctcctcagcg 307
||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||||
Sbjct: 513 ccagcgatgtcaacccatcaagtgctggtgctctggggaacttgagccacctcctcagcg 572
Query: 308 agacggctcaatcatcaatgctgatgccc 336
|||||||||||||||||||||||||||||
Sbjct: 573 agacggctcaatcatcaatgctgatgccc 601
>gb|BF655998.1|BF655998 FM1_42_F08.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 507
Score = 498 bits (251), Expect = e-139
Identities = 308/327 (94%)
Strand = Plus / Plus
Query: 8 cattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggt 67
||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 142 cattctcccaagacgaagaagagctcatcattgagctgcacgctgtcctcggaaacaggt 201
Query: 68 ggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggtctcaaattgcagcacagctgccagggaggactgataatgagatcaagaatctatgga 261
Query: 128 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagccac 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 262 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcccc 321
Query: 188 ttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaacctcagggt 247
||||||||||||||| | |||| |||||||||||| ||| ||||||||||||||||||||
Sbjct: 322 ttactgaggctgatcgcagcggagcagctcccaccgtcaccaccgagagaacctcagggt 381
Query: 248 ccagcgacatcaacccatcaagcactggtcctctggggaacttgagccccctcctcagcg 307
||||||| ||||||||| ||| ||||| |||||||||||||||||| ||| |||||||
Sbjct: 382 ccagcgatgtcaacccatgaagtgctggtgctctggggaacttgagccaccttctcagcg 441
Query: 308 agacggctcaatcatcaatgctgatgc 334
|||||||||||||||||||||||||||
Sbjct: 442 agacggctcaatcatcaatgctgatgc 468
>gb|CN139844.1|CN139844 OX1_24_B03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_B03_A002 5', mRNA sequence
Length = 745
Score = 464 bits (234), Expect = e-129
Identities = 282/298 (94%)
Strand = Plus / Plus
Query: 8 cattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggt 67
||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 448 cattctcccaagacgaagaagagctcatcattgagctgcacgctgtcctcggaaacaggt 507
Query: 68 ggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggtctcaaattgcagcacagctgccagggaggactgataatgagatcaagaatctatgga 567
Query: 128 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagccac 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 568 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcccc 627
Query: 188 ttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaacctcagggt 247
||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 628 ttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgagagaacctcagggt 687
Query: 248 ccagcgacatcaacccatcaagcactggtcctctggggaacttgagccccctcctcag 305
||||||| ||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 688 ccagcgatgtcaacccatcaagtgctggtgctctggggaacttgagccacctcctcag 745
>gb|BI098875.1|BI098875 IP1_34_D01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 249
Score = 373 bits (188), Expect = e-101
Identities = 218/228 (95%)
Strand = Plus / Plus
Query: 8 cattcgcccaagacgaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggt 67
||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 22 cattctcccaagacgaagaagagctcatcattgagctgcacgctgtcctcggaaacaggt 81
Query: 68 ggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatctatgga 127
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ggtctcaaattgcagcacagctgccagggaggactgataatgagatcaagaatctatgga 141
Query: 128 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagccac 187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 142 actcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacacccacaagcccc 201
Query: 188 ttactgaggctgatcacggcggtgcagctcccaccatcagcaccgaga 235
||||||||||||||| | |||| |||||||||||| ||||||||||||
Sbjct: 202 ttactgaggctgatcgcagcggagcagctcccaccgtcagcaccgaga 249
>gb|CD226268.1|CD226268 CCC1_44_D06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_44_D06_A007 5', mRNA sequence
Length = 665
Score = 133 bits (67), Expect = 2e-029
Identities = 189/230 (82%)
Strand = Plus / Plus
Query: 22 gaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaattgca 81
||||||||||| ||||| || || || ||||| || || |||||||||||||| ||||||
Sbjct: 395 gaagaagaccttatcattgaacttcatgctgtactgggaaacaggtggtctcagattgca 454
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaag 141
| | |||| || || |||||||| ||||| |||||||| |||||||| ||||||||
Sbjct: 455 acaaggttgcctggaagaactgataacgagattaagaatctctggaactcaagcatcaag 514
Query: 142 aagaagctgaggcagaaaggcattgatcccaacacccacaagccacttactgaggctgat 201
|||||||| ||||||||||||| || ||||||||||||||||| ||| | |||| |||
Sbjct: 515 aagaagctccggcagaaaggcatcgaccccaacacccacaagccccttgccgaggttgaa 574
Query: 202 cacggcggtgcagctcccaccatcagcaccgagagaacctcagggtccag 251
||| || ||||| ||||| ||||| || ||||||||||| | ||||||
Sbjct: 575 cacagcanagcagcgcccacaatcagtactgagagaacctctgagtccag 624
>gb|CX608930.1|CX608930 ANR1_9_D06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_9_D06_A002 5', mRNA sequence
Length = 831
Score = 115 bits (58), Expect = 4e-024
Identities = 187/230 (81%)
Strand = Plus / Plus
Query: 22 gaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaattgca 81
||||||||||| ||||| || || || ||||| || || |||||||||||||| ||||||
Sbjct: 487 gaagaagaccttatcattgaacttcatgctgtactgggaaacaggtggtctcagattgca 546
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaag 141
| | |||| || || |||||||| ||||| |||||||| |||||||| ||||||||
Sbjct: 547 acaaggttgcctggaagaactgataacgagattaagaatctctggaactcaagcatcaag 606
Query: 142 aagaagctgaggcagaaaggcattgatcccaacacccacaagccacttactgaggctgat 201
|||||||| |||||| |||||| || ||||||||||||||||| ||| | |||| |||
Sbjct: 607 aagaagctccggcagagaggcatcgaccccaacacccacaagccccttgccgaggttgaa 666
Query: 202 cacggcggtgcagctcccaccatcagcaccgagagaacctcagggtccag 251
||| || ||||| || || ||||| || ||||||||||| | ||||||
Sbjct: 667 cacagcaaagcagcgccaacaatcagtactgagagaacctctgagtccag 716
>gb|CW036402.1|CW036402 104_267_10503738_114_30374 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10503738, DNA
sequence
Length = 759
Score = 111 bits (56), Expect = 6e-023
Identities = 158/192 (82%)
Strand = Plus / Plus
Query: 60 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 143 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 202
Query: 120 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 179
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 203 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 262
Query: 180 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 239
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 263 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 322
Query: 240 ctcagggtccag 251
||| | ||||||
Sbjct: 323 ctctgagtccag 334
>gb|CW096979.1|CW096979 104_462_11002200_116_34349_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002200, DNA
sequence
Length = 565
Score = 111 bits (56), Expect = 6e-023
Identities = 158/192 (82%)
Strand = Plus / Minus
Query: 60 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 398 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 339
Query: 120 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 179
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 338 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 279
Query: 180 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 239
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 278 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 219
Query: 240 ctcagggtccag 251
||| | ||||||
Sbjct: 218 ctctgagtccag 207
>gb|CW096980.1|CW096980 104_462_11002200_148_34353_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11002200, DNA
sequence
Length = 672
Score = 111 bits (56), Expect = 6e-023
Identities = 158/192 (82%)
Strand = Plus / Plus
Query: 60 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 353 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 412
Query: 120 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 179
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 413 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 472
Query: 180 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 239
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 473 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 532
Query: 240 ctcagggtccag 251
||| | ||||||
Sbjct: 533 ctctgagtccag 544
>gb|CW448607.1|CW448607 fsbb001f182e24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f182e24, DNA
sequence
Length = 806
Score = 111 bits (56), Expect = 6e-023
Identities = 158/192 (82%)
Strand = Plus / Plus
Query: 60 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 545 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 604
Query: 120 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 179
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 605 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 664
Query: 180 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 239
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 665 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 724
Query: 240 ctcagggtccag 251
||| | ||||||
Sbjct: 725 ctctgagtccag 736
>gb|CW454158.1|CW454158 fsbb001f198h17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198h17, DNA
sequence
Length = 617
Score = 109 bits (55), Expect = 2e-022
Identities = 151/183 (82%)
Strand = Plus / Plus
Query: 60 gaacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||||||| |||||| | | |||| || || |||||||| ||||| |||||
Sbjct: 375 gaacaggtggtctcagattgcaacaaggttgcctggaagaactgataacgagattaagaa 434
Query: 120 tctatggaactcgtgcatcaagaagaagctgaggcagaaaggcattgatcccaacaccca 179
||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 435 tctctggaactcaagcatcaagaagaagctccggcagaaaggcatcgaccccaacaccca 494
Query: 180 caagccacttactgaggctgatcacggcggtgcagctcccaccatcagcaccgagagaac 239
|||||| ||| | |||| ||| ||| || ||||| || || ||||| || ||||||||
Sbjct: 495 caagccccttgccgaggttgaacacagcaaagcagcgccaacaatcagtactgagagaac 554
Query: 240 ctc 242
|||
Sbjct: 555 ctc 557
>gb|CL151120.1|CL151120 104_333_10779023_116_31360_191 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779023, DNA
sequence
Length = 714
Score = 103 bits (52), Expect = 1e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 100 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaa 159
|||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 6 actgataacgagattaagaatctctggaactcaagcatcaagaagaagctccggcagaaa 65
Query: 160 ggcattgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctccc 219
||||| || ||||||||||||||||| ||| | |||| ||| ||| || ||||| ||
Sbjct: 66 ggcatcgaccccaacacccacaagccccttgccgaggttgaacacagcaaagcagcgcca 125
Query: 220 accatcagcaccgagagaacctcagggtccag 251
|| ||||| || ||||||||||| | ||||||
Sbjct: 126 acaatcagtactgagagaacctctgagtccag 157
>gb|CW103828.1|CW103828 104_472_11012098_148_34437_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012098, DNA
sequence
Length = 623
Score = 103 bits (52), Expect = 1e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 100 actgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctgaggcagaaa 159
|||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 30 actgataacgagattaagaatctctggaactcaagcatcaagaagaagctccggcagaaa 89
Query: 160 ggcattgatcccaacacccacaagccacttactgaggctgatcacggcggtgcagctccc 219
||||| || ||||||||||||||||| ||| | |||| ||| ||| || ||||| ||
Sbjct: 90 ggcatcgaccccaacacccacaagccccttgccgaggttgaacacagcaaagcagcgcca 149
Query: 220 accatcagcaccgagagaacctcagggtccag 251
|| ||||| || ||||||||||| | ||||||
Sbjct: 150 acaatcagtactgagagaacctctgagtccag 181
>gb|CL150110.1|CL150110 104_331_10778290_114_31355_226 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10778290, DNA
sequence
Length = 531
Score = 79.8 bits (40), Expect = 2e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 62 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 121
||||||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 256 acaggtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaact 315
Query: 122 tatggaactcgtgcatcaagaagaagct 149
| |||||||||| |||||||||||||||
Sbjct: 316 tctggaactcgtacatcaagaagaagct 343
>gb|CW131835.1|CW131835 104_514_11115886_116_34787_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11115886, DNA
sequence
Length = 603
Score = 79.8 bits (40), Expect = 2e-013
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 62 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 121
||||||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 444 acaggtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaact 503
Query: 122 tatggaactcgtgcatcaagaagaagct 149
| |||||||||| |||||||||||||||
Sbjct: 504 tctggaactcgtacatcaagaagaagct 531
>gb|CW180395.1|CW180395 104_594_11160615_148_36632_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160615, DNA
sequence
Length = 673
Score = 79.8 bits (40), Expect = 2e-013
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 62 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 121
||||||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 433 acaggtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaact 374
Query: 122 tatggaactcgtgcatcaagaagaagct 149
| |||||||||| |||||||||||||||
Sbjct: 373 tctggaactcgtacatcaagaagaagct 346
>gb|AW563989.1|AW563989 LG1_281_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 523
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 61 aacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaat 120
|||| ||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 201 aacaagtggtctcagattgcaacgcagctgccggggcggacggacaacgaggtcaagaac 260
Query: 121 ctatggaactcgtgcatcaagaagaagct 149
| |||||||||| |||||||||||||||
Sbjct: 261 ttctggaactcgtacatcaagaagaagct 289
>gb|CW136797.1|CW136797 104_521_11118569_148_34842_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118569, DNA
sequence
Length = 576
Score = 61.9 bits (31), Expect = 5e-008
Identities = 85/103 (82%)
Strand = Plus / Minus
Query: 83 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 142
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 303 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 244
Query: 143 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 185
||||||| ||| ||| ||||| || ||| ||||||||||||
Sbjct: 243 agaagctcaggaagatgggcatcgaccccgtcacccacaagcc 201
>gb|CW372021.1|CW372021 fsbb001f047l20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047l20, DNA
sequence
Length = 679
Score = 61.9 bits (31), Expect = 5e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 63 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatct 122
||||||||| || || ||| |||||||||| ||| |||| || || ||||| || || |
Sbjct: 121 caggtggtcccagatcgcatcgcagctgccggggcggacggacaacgagattaaaaactt 180
Query: 123 atggaactcgtgcatcaagaagaagct 149
||||||||||||||||||||||||||
Sbjct: 181 ctggaactcgtgcatcaagaagaagct 207
>gb|CW396674.1|CW396674 fsbb001f085d16f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085d16, DNA
sequence
Length = 652
Score = 61.9 bits (31), Expect = 5e-008
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 83 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 142
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 250 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 309
Query: 143 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 185
||||||| ||| ||| ||||| || ||| ||||||||||||
Sbjct: 310 agaagctcaggaagatgggcatcgaccccgtcacccacaagcc 352
>gb|CD428558.1|CD428558 ETH1_27_H11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_H11_A002 5', mRNA sequence
Length = 665
Score = 61.9 bits (31), Expect = 5e-008
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 61 aacaggtggtctcaaattgcagcgcagctgcc-agggaggactgataatgagatcaagaa 119
|||| ||||||||| |||||| |||||||||| ||| |||| || || ||| |||||||
Sbjct: 327 aacaagtggtctcagattgcaacgcagctgccgngggcggacggacaacgaggtcaagaa 386
Query: 120 tctatggaactcgtgcatcaagaagaagct 149
| |||||||||| |||||||||||||||
Sbjct: 387 cttctggaactcgtacatcaagaagaagct 416
>gb|AF474131.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb54) gene, partial
cds
Length = 1899
Score = 61.9 bits (31), Expect = 5e-008
Identities = 85/103 (82%)
Strand = Plus / Plus
Query: 83 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 142
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 1693 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 1752
Query: 143 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 185
||||||| ||| ||| ||||| || ||| ||||||||||||
Sbjct: 1753 agaagctcaggaagatgggcatcgaccccgtcacccacaagcc 1795
>gb|CD232318.1|CD232318 SS1_39_E09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_39_E09_A012 5', mRNA sequence
Length = 615
Score = 60.0 bits (30), Expect = 2e-007
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 22 gaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaattgca 81
||||||||||| ||||| || || || ||||| || || |||||||||||||| ||||||
Sbjct: 504 gaagaagaccttatcattgaacttcatgctgtactgggaaacaggtggtctcagattgca 563
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaatctatggaactc 131
| | |||| || || |||||||| ||||| |||||||| ||||||||
Sbjct: 564 acaaggttgcctggaagaactgataacgagattaagaatctctggaactc 613
>gb|CN149937.1|CN149937 WOUND1_65_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_G12_A002 5', mRNA sequence
Length = 748
Score = 58.0 bits (29), Expect = 8e-007
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 61 aacaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaat 120
|||| ||||||||| ||||| ||||||||||| || |||| || || ||| |||||||
Sbjct: 412 aacaagtggtctcagattgcggcgcagctgcctggccggacggacaacgaggtcaagaac 471
Query: 121 ctatggaactcgtgcatcaagaaga 145
| |||||||||| |||||||||||
Sbjct: 472 ttttggaactcgtacatcaagaaga 496
>gb|CW317106.1|CW317106 104_808_11473239_116_35853_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473239, DNA
sequence
Length = 633
Score = 56.0 bits (28), Expect = 3e-006
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 83 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 142
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 100 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 41
Query: 143 agaagctgaggcagaaaggcattgatcccaacacccacaa 182
||||||| ||| ||| ||||| || ||| |||||||||
Sbjct: 40 agaagctcaggaagatgggcatcgaccccgtcacccacaa 1
>gb|CX611279.1|CX611279 ANR1_23_E12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_23_E12_A002 5', mRNA sequence
Length = 591
Score = 56.0 bits (28), Expect = 3e-006
Identities = 88/108 (81%)
Strand = Plus / Plus
Query: 22 gaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaattgca 81
||||||||||| ||||| || || || ||||| || || |||||||||||||| ||||||
Sbjct: 484 gaagaagaccttatcattgaacttcatgctgtactgggaaacaggtggtctcagattgca 543
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaatctatggaac 129
| | |||| || || |||||||| ||||| |||||||| ||||||
Sbjct: 544 acaaggttgcctggaagaactgataacgagattaagaatctctggaac 591
>gb|AF474130.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb53) gene, partial
cds
Length = 1892
Score = 54.0 bits (27), Expect = 1e-005
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 83 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 142
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 1619 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 1678
Query: 143 agaagctgaggcagaaaggcattgatcccaacacccacaagcc 185
||||||| ||| ||| ||||| | ||| ||||||||||||
Sbjct: 1679 agaagctcaggaagatgggcatctaccccgtcacccacaagcc 1721
>gb|AF474133.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb67) gene, partial
cds
Length = 2224
Score = 54.0 bits (27), Expect = 1e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 83 cgcagctgccagggaggactgataatgagatcaagaatctatggaactcgtgcatcaaga 142
|||||||||| |||||||| || || ||||||||||| | |||||| || ||||||||
Sbjct: 1892 cgcagctgccggggaggacggacaacgagatcaagaaccactggaacacgcacatcaaga 1951
Query: 143 agaagct 149
|||||||
Sbjct: 1952 agaagct 1958
>gb|CW154932.1|CW154932 104_557_11145867_116_36359_012 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145867, DNA
sequence
Length = 665
Score = 52.0 bits (26), Expect = 5e-005
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 97 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 593 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 541
>gb|CW166340.1|CW166340 104_575_11153002_116_36764_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11153002, DNA
sequence
Length = 661
Score = 52.0 bits (26), Expect = 5e-005
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 97 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 56 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 4
>gb|CW217449.1|CW217449 104_650_11195661_148_37134_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195661, DNA
sequence
Length = 678
Score = 52.0 bits (26), Expect = 5e-005
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 97 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 392 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 340
>gb|CW276952.1|CW276952 104_750_11405764_148_35399_002 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11405764, DNA
sequence
Length = 693
Score = 52.0 bits (26), Expect = 5e-005
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 91 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 143
>gb|CW338064.1|CW338064 104_838_11484544_116_36125_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484544, DNA
sequence
Length = 683
Score = 52.0 bits (26), Expect = 5e-005
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 97 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 546 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 494
>gb|CW338065.1|CW338065 104_838_11484544_148_36124_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11484544, DNA
sequence
Length = 735
Score = 52.0 bits (26), Expect = 5e-005
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 365 aggacagataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 417
>gb|CW172349.1|CW172349 104_583_11156244_148_36539_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11156244, DNA
sequence
Length = 537
Score = 48.1 bits (24), Expect = 7e-004
Identities = 44/48 (91%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 103 gataatgagatcaagaatcta-tggaactcgtgcatcaagaagaagct 149
||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 2 gataatgagatcaagaa-ctactggaactcacgcatcaagaagaagct 48
>gb|CW180394.1|CW180394 104_594_11160615_116_36636_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11160615, DNA
sequence
Length = 548
Score = 48.1 bits (24), Expect = 7e-004
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 62 acaggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatc 121
||||||||||||| |||||| | |||||||| ||| |||| || || ||| |||||||
Sbjct: 473 acaggtggtctcacattgcaactcagctgccggggcggacggacaacgaggtcaagaact 532
Query: 122 tatggaactcgt 133
| ||||||||||
Sbjct: 533 tctggaactcgt 544
>gb|CD213280.1|CD213280 HS1_29_B09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_29_B09_A012 5', mRNA sequence
Length = 580
Score = 48.1 bits (24), Expect = 7e-004
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 22 gaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtctcaaattgca 81
||||||||||| ||||| || || || ||||| || || |||||||||||||| ||||||
Sbjct: 506 gaagaagaccttatcattgaacttcatgctgtactgggaaacaggtggtctcagattgca 565
>gb|CW065792.1|CW065792 104_312_10523339_115_30130 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523339, DNA
sequence
Length = 607
Score = 46.1 bits (23), Expect = 0.003
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 151
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 190 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 244
>gb|CW235373.1|CW235373 104_690_11214948_116_37410_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214948, DNA
sequence
Length = 697
Score = 46.1 bits (23), Expect = 0.003
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 151
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 196 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 250
>gb|CW377165.1|CW377165 fsbb001f055f22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055f22, DNA
sequence
Length = 720
Score = 46.1 bits (23), Expect = 0.003
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 151
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 283 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 337
>gb|CX608115.1|CX608115 ANR1_32_F03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_F03_A002 5', mRNA sequence
Length = 586
Score = 46.1 bits (23), Expect = 0.003
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 151
|||||||| || ||||||||||| | |||||| || |||||||||||||||||
Sbjct: 470 aggactgacaacgagatcaagaaccactggaacacgcacatcaagaagaagctga 524
>gb|CW258078.1|CW258078 104_723_11227682_116_35159_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227682, DNA
sequence
Length = 617
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 124 tggaactcgtgcatcaagaagaagct 149
|||||||| |||||||||||||||||
Sbjct: 5 tggaactcatgcatcaagaagaagct 30
>gb|CW310980.1|CW310980 104_800_11469995_148_35755_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469995, DNA
sequence
Length = 655
Score = 44.1 bits (22), Expect = 0.012
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 124 tggaactcgtgcatcaagaagaagct 149
|||||||| |||||||||||||||||
Sbjct: 1 tggaactcatgcatcaagaagaagct 26
>gb|CW128322.1|CW128322 104_509_11113940_116_34745_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113940, DNA
sequence
Length = 584
Score = 42.1 bits (21), Expect = 0.046
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 63 caggtggtctcaaattgcagcgcagctgccagggaggactgataatgagatcaagaatct 122
||||||||| || || ||| |||||||||| ||| |||| || || ||||| || || |
Sbjct: 508 caggtggtcccagatcgcatcgcagctgccggggcggacggacaacgagattaaaaactt 567
Query: 123 atggaactcgtgcatca 139
||||||||||||||||
Sbjct: 568 ctggaactcgtgcatca 584
>gb|CW045801.1|CW045801 104_282_10509787_114_30228 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509787, DNA
sequence
Length = 398
Score = 40.1 bits (20), Expect = 0.18
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 84 gcagctgccagggaggactgataatgagatcaagaa 119
|||||| ||||||||||| || || |||||||||||
Sbjct: 3 gcagctcccagggaggacggacaacgagatcaagaa 38
>gb|CW066615.1|CW066615 104_313_10523776_114_30148 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10523776, DNA
sequence
Length = 428
Score = 40.1 bits (20), Expect = 0.18
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 84 gcagctgccagggaggactgataatgagatcaagaa 119
|||||| ||||||||||| || || |||||||||||
Sbjct: 36 gcagctcccagggaggacggacaacgagatcaagaa 71
>gb|CW266637.1|CW266637 104_736_11232538_148_35286_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232538, DNA
sequence
Length = 574
Score = 40.1 bits (20), Expect = 0.18
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 84 gcagctgccagggaggactgataatgagatcaagaa 119
|||||| ||||||||||| || || |||||||||||
Sbjct: 178 gcagctcccagggaggacggacaacgagatcaagaa 213
>gb|CW310158.1|CW310158 104_799_11469571_116_37434_076 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469571, DNA
sequence
Length = 449
Score = 40.1 bits (20), Expect = 0.18
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 84 gcagctgccagggaggactgataatgagatcaagaa 119
|||||| ||||||||||| || || |||||||||||
Sbjct: 73 gcagctcccagggaggacggacaacgagatcaagaa 108
>gb|CW449861.1|CW449861 fsbb001f188d08k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188d08, DNA
sequence
Length = 530
Score = 40.1 bits (20), Expect = 0.18
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 84 gcagctgccagggaggactgataatgagatcaagaa 119
|||||| ||||||||||| || || |||||||||||
Sbjct: 270 gcagctcccagggaggacggacaacgagatcaagaa 305
>gb|CW454633.1|CW454633 fsbb001f199c24k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f199c24, DNA
sequence
Length = 343
Score = 40.1 bits (20), Expect = 0.18
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 84 gcagctgccagggaggactgataatgagatcaagaa 119
|||||| ||||||||||| || || |||||||||||
Sbjct: 119 gcagctcccagggaggacggacaacgagatcaagaa 84
>gb|CW039028.1|CW039028 104_271_10505257_114_30387 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505257, DNA
sequence
Length = 681
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 444 tgccagggcgcactgacaatgagatcaagaa 474
>gb|CW044723.1|CW044723 104_280_10509121_114_30262 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10509121, DNA
sequence
Length = 643
Score = 38.2 bits (19), Expect = 0.71
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 97 aggactgataatgagatcaagaa 119
||||| |||||||||||||||||
Sbjct: 599 aggacagataatgagatcaagaa 621
>gb|CW212940.1|CW212940 104_644_11191287_116_37030_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11191287, DNA
sequence
Length = 618
Score = 38.2 bits (19), Expect = 0.71
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 33 catcatcgagctgcacgctgtcctcgggaacaggtggtc 71
||||||| |||||||| | ||| |||| |||||||||||
Sbjct: 240 catcatcaagctgcactccgtcgtcggcaacaggtggtc 202
>gb|CW258488.1|CW258488 104_724_11227903_116_35164_026 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227903, DNA
sequence
Length = 664
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 173 tgccagggcgcactgacaatgagatcaagaa 143
>gb|CW308697.1|CW308697 104_797_11468806_116_35720_091 Sorghum methylation filtered
library (LibID: 104) Sorghum bicolor genomic clone
11468806, DNA sequence
Length = 625
Score = 38.2 bits (19), Expect = 0.71
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 33 catcatcgagctgcacgctgtcctcgggaacaggtggtc 71
||||||| |||||||| | ||| |||| |||||||||||
Sbjct: 39 catcatcaagctgcactccgtcgtcggcaacaggtggtc 1
>gb|CW316832.1|CW316832 104_808_11473099_148_35857_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11473099, DNA
sequence
Length = 586
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 545 tgccagggcgcactgacaatgagatcaagaa 575
>gb|CW363913.1|CW363913 fsbb001f035l18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035l18, DNA
sequence
Length = 712
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 510 tgccagggcgcactgacaatgagatcaagaa 540
>gb|CW363914.1|CW363914 fsbb001f035l18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035l18, DNA
sequence
Length = 659
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 515 tgccagggcgcactgacaatgagatcaagaa 485
>gb|CW377249.1|CW377249 fsbb001f055h19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055h19, DNA
sequence
Length = 705
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 340 tgccagggcgcactgacaatgagatcaagaa 370
>gb|CW377250.1|CW377250 fsbb001f055h19k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f055h19, DNA
sequence
Length = 706
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 633 tgccagggcgcactgacaatgagatcaagaa 603
>gb|AW285644.1|AW285644 LG1_319_E08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 279
Score = 38.2 bits (19), Expect = 0.71
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 162 cattgatcccaacacccac 180
|||||||||||||||||||
Sbjct: 208 cattgatcccaacacccac 190
>gb|CX613908.1|CX613908 GABR1_10_H03.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_10_H03_A002 5', mRNA sequence
Length = 823
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 605 tgccagggcgcactgacaatgagatcaagaa 635
>gb|CX614961.1|CX614961 GABR1_17_G10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_G10_A002 3', mRNA sequence
Length = 746
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 27 tgccagggcgcactgacaatgagatcaagaa 57
>gb|CX615050.1|CX615050 GABR1_17_G10.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_17_G10_A002 5', mRNA sequence
Length = 791
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 472 tgccagggcgcactgacaatgagatcaagaa 502
>gb|CX622870.1|CX622870 GABR1_66_A07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_66_A07_A002 5', mRNA sequence
Length = 675
Score = 38.2 bits (19), Expect = 0.71
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 89 tgccagggaggactgataatgagatcaagaa 119
|||||||| | ||||| ||||||||||||||
Sbjct: 500 tgccagggcgcactgacaatgagatcaagaa 530
>gb|AF474126.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb12) gene, partial
cds
Length = 2020
Score = 38.2 bits (19), Expect = 0.71
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 33 catcatcgagctgcacgctgtcctcgggaacaggtggtc 71
||||||| |||||||| | ||| |||| |||||||||||
Sbjct: 1754 catcatcaagctgcactccgtcgtcggcaacaggtggtc 1792
>gb|CW055923.1|CW055923 104_297_10517404_114_30172 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517404, DNA
sequence
Length = 395
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 141 gaagaagctgaggcagaa 158
||||||||||||||||||
Sbjct: 279 gaagaagctgaggcagaa 262
>gb|CW057439.1|CW057439 104_299_10518224_114_30169 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518224, DNA
sequence
Length = 426
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
|||||||| || |||||||| || || |||||||||||
Sbjct: 6 gcgcagctaccggggaggacggacaacgagatcaagaa 43
>gb|CW061022.1|CW061022 104_304_10520176_114_30143 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10520176, DNA
sequence
Length = 628
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 141 gaagaagctgaggcagaa 158
||||||||||||||||||
Sbjct: 280 gaagaagctgaggcagaa 263
>gb|CW078375.1|CW078375 104_392_10896644_148_31925_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10896644, DNA
sequence
Length = 728
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 434 gcgcagctgccggggaggacggacaatgacataaagaa 471
>gb|CW163341.1|CW163341 104_571_11151411_116_36453_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151411, DNA
sequence
Length = 707
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 302 gacgaggacgacctcatcatcaagctgcac 331
>gb|CW171329.1|CW171329 104_582_11155681_116_36525_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155681, DNA
sequence
Length = 720
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 590 gacgaggacgacctcatcatcaagctgcac 619
>gb|CW210095.1|CW210095 104_640_11189612_116_37000_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189612, DNA
sequence
Length = 675
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 237 aacctcagggtccagcga 254
||||||||||||||||||
Sbjct: 313 aacctcagggtccagcga 330
>gb|CW210096.1|CW210096 104_640_11189612_148_36999_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189612, DNA
sequence
Length = 690
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 237 aacctcagggtccagcga 254
||||||||||||||||||
Sbjct: 547 aacctcagggtccagcga 530
>gb|CW227380.1|CW227380 104_665_11205385_116_37227_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11205385, DNA
sequence
Length = 600
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 218 ccaccatcagcaccgaga 235
||||||||||||||||||
Sbjct: 103 ccaccatcagcaccgaga 120
>gb|CW235207.1|CW235207 104_690_11214858_148_37414_073 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11214858, DNA
sequence
Length = 604
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 237 aacctcagggtccagcga 254
||||||||||||||||||
Sbjct: 131 aacctcagggtccagcga 148
>gb|CW237814.1|CW237814 104_694_11216380_116_37489_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216380, DNA
sequence
Length = 734
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 715 gcgcagctgccggggaggacggacaatgacataaagaa 678
>gb|CW237815.1|CW237815 104_694_11216380_148_37490_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11216380, DNA
sequence
Length = 615
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 106 gcgcagctgccggggaggacggacaatgacataaagaa 143
>gb|CW268204.1|CW268204 104_738_11401152_148_35300_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401152, DNA
sequence
Length = 696
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 393 gcgcagctgccggggaggacggacaatgacataaagaa 430
>gb|CW272684.1|CW272684 104_745_11403514_116_35718_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403514, DNA
sequence
Length = 639
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 237 aacctcagggtccagcga 254
||||||||||||||||||
Sbjct: 542 aacctcagggtccagcga 559
>gb|CW298181.1|CW298181 104_780_11462443_148_35652_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462443, DNA
sequence
Length = 545
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 81 gacgaggacgacctcatcatcaagctgcac 110
>gb|CW364997.1|CW364997 fsbb001f037f01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f037f01, DNA
sequence
Length = 608
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
|||||||| || |||||||| || || |||||||||||
Sbjct: 209 gcgcagctaccggggaggacggacaacgagatcaagaa 172
>gb|CW409937.1|CW409937 fsbb001f104h15f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f104h15, DNA
sequence
Length = 724
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 141 gaagaagctgaggcagaa 158
||||||||||||||||||
Sbjct: 684 gaagaagctgaggcagaa 667
>gb|CW409938.1|CW409938 fsbb001f104h15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f104h15, DNA
sequence
Length = 812
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 141 gaagaagctgaggcagaa 158
||||||||||||||||||
Sbjct: 574 gaagaagctgaggcagaa 591
>gb|CW414653.1|CW414653 fsbb001f114g17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f114g17, DNA
sequence
Length = 669
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Minus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 451 gacgaggacgacctcatcatcaagctgcac 422
>gb|CW414654.1|CW414654 fsbb001f114g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f114g17, DNA
sequence
Length = 626
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 377 gacgaggacgacctcatcatcaagctgcac 406
>gb|CW419529.1|CW419529 fsbb001f124g17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f124g17, DNA
sequence
Length = 613
Score = 36.2 bits (18), Expect = 2.8
Identities = 48/58 (82%)
Strand = Plus / Minus
Query: 94 gggaggactgataatgagatcaagaatctatggaactcgtgcatcaagaagaagctga 151
|||||||| || || ||||||||||| | |||||| | |||||||||||||||||
Sbjct: 66 gggaggacggacaacgagatcaagaaccactggaacacccacatcaagaagaagctga 9
>gb|CW467626.1|CW467626 fsbb001f219g10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219g10, DNA
sequence
Length = 794
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 171 gcgcagctgccggggaggacggacaatgacataaagaa 208
>gb|CW467627.1|CW467627 fsbb001f219g10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219g10, DNA
sequence
Length = 777
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 747 gcgcagctgccggggaggacggacaatgacataaagaa 710
>gb|CW491260.1|CW491260 fsbb001f281a22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281a22, DNA
sequence
Length = 623
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Minus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 335 gacgaggacgacctcatcatcaagctgcac 306
>gb|CD209759.1|CD209759 HS1_54_C12.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_54_C12_A012 5', mRNA sequence
Length = 709
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 320 gacgaggacgacctcatcatcaagctgcac 349
>gb|CN140754.1|CN140754 OX1_46_F09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_46_F09_A002 5', mRNA sequence
Length = 439
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 395 gcgcagctgccggggaggacggacaatgacataaagaa 432
>gb|CN148942.1|CN148942 WOUND1_59_F10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_59_F10_A002 5', mRNA sequence
Length = 949
Score = 36.2 bits (18), Expect = 2.8
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 19 gacgaagaagacctcatcatcgagctgcac 48
||||| || |||||||||||| ||||||||
Sbjct: 314 gacgaggacgacctcatcatcaagctgcac 343
>gb|CX608328.1|CX608328 ANR1_38_A10.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_38_A10_A002 3', mRNA sequence
Length = 628
Score = 36.2 bits (18), Expect = 2.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 141 gaagaagctgaggcagaa 158
||||||||||||||||||
Sbjct: 357 gaagaagctgaggcagaa 374
>gb|AF474125.1| Sorghum bicolor typical A-type R2R3 Myb protein (MybY1) gene,
partial cds
Length = 318
Score = 36.2 bits (18), Expect = 2.8
Identities = 42/50 (84%)
Strand = Plus / Plus
Query: 22 gaagaagacctcatcatcgagctgcacgctgtcctcgggaacaggtggtc 71
||||| ||| |||||||| |||| ||||| |||||| |||||||||||
Sbjct: 190 gaagaggacatcatcatcaagctccacgccaccctcggcaacaggtggtc 239
>gb|AF474127.1| Sorghum bicolor typical P-type R2R3 Myb protein (Myb20) gene, partial
cds
Length = 2328
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 2140 gcgcagctgccggggaggacggacaatgacataaagaa 2177
>gb|AY363161.1| Sorghum bicolor P-type R2R3 Myb protein (Myb86) gene, partial cds
Length = 752
Score = 36.2 bits (18), Expect = 2.8
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 82 gcgcagctgccagggaggactgataatgagatcaagaa 119
||||||||||| |||||||| || ||||| || |||||
Sbjct: 562 gcgcagctgccggggaggacggacaatgacataaagaa 599
Database: Sorghum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:37 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 124,850
Number of Sequences: 832831
Number of extensions: 124850
Number of successful extensions: 34345
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 34178
Number of HSP's gapped (non-prelim): 153
length of query: 480
length of database: 491,359,669
effective HSP length: 19
effective length of query: 461
effective length of database: 475,535,880
effective search space: 219222040680
effective search space used: 219222040680
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)