BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE6a06.yg.3.1
(2118 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN124921.1|CN124921 RHOH1_7_F03.g1_A002 Acid- and alkali... 1378 0.0
gb|CN129285.1|CN129285 RHOH1_34_C04.g1_A002 Acid- and alkal... 1350 0.0
gb|CN124846.1|CN124846 RHOH1_7_F03.b1_A002 Acid- and alkali... 1142 0.0
gb|CD213833.1|CD213833 HS1_53_D04.g1_A012 Heat-shocked seed... 1061 0.0
gb|CD206398.1|CD206398 HS1_22_D08.g1_A012 Heat-shocked seed... 1035 0.0
gb|CD233368.1|CD233368 SS1_13_D12.g1_A012 Salt-stressed see... 1015 0.0
gb|CD223690.1|CD223690 CCC1_29_E05.g1_A007 Callus culture/c... 1011 0.0
gb|CD212234.1|CD212234 HS1_71_C09.g1_A012 Heat-shocked seed... 987 0.0
gb|BF656485.1|BF656485 FM1_50_E10.g1_A003 Floral-Induced Me... 969 0.0
gb|CD212213.1|CD212213 HS1_71_C09.b1_A012 Heat-shocked seed... 959 0.0
gb|CD222032.1|CD222032 CCC1_1_F02.g1_A007 Callus culture/ce... 954 0.0
gb|BM322589.1|BM322589 PIC1_6_G03.b1_A002 Pathogen-infected... 950 0.0
gb|CD228982.1|CD228982 CCC1_11_C01.b1_A007 Callus culture/c... 948 0.0
gb|CD234768.1|CD234768 SS1_17_F10.g1_A012 Salt-stressed see... 936 0.0
gb|CD206376.1|CD206376 HS1_22_D08.b1_A012 Heat-shocked seed... 932 0.0
gb|CD224973.1|CD224973 CCC1_37_B06.g1_A007 Callus culture/c... 922 0.0
gb|BF587121.1|BF587121 FM1_32_E01.b1_A003 Floral-Induced Me... 777 0.0
gb|CF070812.1|CF070812 FE1_4_C02.g1_A002 Iron-deficient see... 777 0.0
gb|AW287263.2|AW287263 LG1_268_G03.b1_A002 Light Grown 1 (L... 771 0.0
gb|BG241249.1|BG241249 OV1_40_A03.b1_A002 Ovary 1 (OV1) Sor... 728 0.0
gb|CN129198.1|CN129198 RHOH1_34_C04.b3_A002 Acid- and alkal... 724 0.0
gb|CD213741.1|CD213741 HS1_53_D04.b1_A012 Heat-shocked seed... 704 0.0
gb|BG463075.1|BG463075 EM1_47_C02.b1_A002 Embryo 1 (EM1) So... 700 0.0
gb|CD229063.1|CD229063 CCC1_11_C01.g1_A007 Callus culture/c... 698 0.0
gb|BG463159.1|BG463159 EM1_47_C02.g1_A002 Embryo 1 (EM1) So... 682 0.0
gb|CD234671.1|CD234671 SS1_17_F10.b1_A012 Salt-stressed see... 668 0.0
gb|CN124215.1|CN124215 RHOH1_3_G08.b1_A002 Acid- and alkali... 630 e-178
gb|AW287192.2|AW287192 LG1_267_F08.b1_A002 Light Grown 1 (L... 609 e-172
gb|AW287217.2|AW287217 LG1_268_A04.b1_A002 Light Grown 1 (L... 589 e-166
gb|BM327074.1|BM327074 PIC1_6_G03.g1_A002 Pathogen-infected... 575 e-162
gb|CD221996.1|CD221996 CCC1_1_F02.b1_A007 Callus culture/ce... 575 e-162
gb|CD233277.1|CD233277 SS1_13_D12.b1_A012 Salt-stressed see... 509 e-142
gb|BG240927.1|BG240927 OV1_40_A03.g1_A002 Ovary 1 (OV1) Sor... 505 e-141
gb|CD223582.1|CD223582 CCC1_29_E05.b1_A007 Callus culture/c... 462 e-128
gb|CN124291.1|CN124291 RHOH1_3_G08.g1_A002 Acid- and alkali... 462 e-128
gb|CD224948.1|CD224948 CCC1_37_B06.b1_A007 Callus culture/c... 446 e-123
gb|BI246134.1|BI246134 IP1_67_C11.b1_A002 Immature pannicle... 410 e-112
gb|BM322739.1|BM322739 PIC1_9_E06.b1_A002 Pathogen-infected... 400 e-109
gb|BF587034.1|BF587034 FM1_32_E01.g1_A003 Floral-Induced Me... 359 7e-097
gb|BI245576.1|BI245576 IP1_67_C11.g1_A002 Immature pannicle... 307 2e-081
gb|BF481346.1|BF481346 FM1_18_H04.g1_A003 Floral-Induced Me... 244 3e-062
gb|CW070735.1|CW070735 104_322_10590960_116_30543 Sorghum m... 161 3e-037
gb|BF481417.1|BF481417 FM1_18_H04.b1_A003 Floral-Induced Me... 129 1e-027
gb|BF481418.1|BF481418 FM1_18_H05.b1_A003 Floral-Induced Me... 129 1e-027
gb|BF481347.1|BF481347 FM1_18_H05.g1_A003 Floral-Induced Me... 100 1e-018
>gb|CN124921.1|CN124921 RHOH1_7_F03.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_7_F03_A002 5', mRNA sequence
Length = 853
Score = 1378 bits (695), Expect = 0.0
Identities = 770/795 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 59 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 118
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 119 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 178
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 179 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 238
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 298
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 299 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 358
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 359 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 418
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 478
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 479 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 538
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 539 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 598
Query: 541 catatattatcaggccgaagttcaaggacaaaagatcacctggctaactccgcatgctct 600
|||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 599 catatatttccaggctgaagttcaaggacaaaagatcacctggctaacccctcatgctct 658
Query: 601 tcagcaagtattaactgatgatgttgatttcaatgtgatgctttcttttctagaattcta 660
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 659 tcagcaagtattaaccgatgatgttgatttcaatgtgatgctctcttttctagaattcta 718
Query: 661 tgagactcttctaggatttgtgaacttcaaactctatcattcaataaatgtaaattatcc 720
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 719 tgagactcttttaggatttgtgaacttcaagctctatcattcaataaatgtaaattatcc 778
Query: 721 tcctattctggatccacgtctggaagctttagctgctgagctctatgcattgtgccgata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tcctattctggatccacgtctggaagctttagctgctgagctctatgcattgtgccgata 838
Query: 781 catgtctgctggttc 795
|||||||||||||||
Sbjct: 839 catgtctgctggttc 853
>gb|CN129285.1|CN129285 RHOH1_34_C04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_C04_A002 5', mRNA sequence
Length = 856
Score = 1350 bits (681), Expect = 0.0
Identities = 768/797 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 119
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 120 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 179
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 180 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 239
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 299
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 300 aaggaaggctaaaaaggctgttgctaagaaaaacggggatctcgcagacaggctgttgaa 359
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 360 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 419
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 479
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 480 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 539
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 540 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 599
Query: 541 catatattatcaggccgaagttcaaggacaaaagatcacctggctaactccgcatgctct 600
|||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 600 catatatttccaggctgaagttcaaggacaaaagatcacctggctaacccctcatgctct 659
Query: 601 tcagcaagtattaactgatgatgttgatttcaatgtgatgctttcttttctagaattcta 660
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 660 tcagcaagtattaaccgatgatgttgatttcaatgtgatgctctcttttctagaattcta 719
Query: 661 tgagactcttctaggatttgtgaacttcaaactctatcattcaataaatgtaaattatcc 720
|||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 720 tgagactcttttaggatttgtgaacttcaagctctgtcattcaataaatgtaaattatcc 779
Query: 721 tcctattctggatccacgtctggaagctttagctgctgagctctatgcattgtgccgata 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 780 tcctattctggatccacgtctgggagctttagctgctgagctctatgcattgtgccgata 839
Query: 781 catgtctgctggttcca 797
|||||||||||||||||
Sbjct: 840 catgtctgctggttcca 856
>gb|CN124846.1|CN124846 RHOH1_7_F03.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_7_F03_A002 3', mRNA sequence
Length = 780
Score = 1142 bits (576), Expect = 0.0
Identities = 726/776 (93%)
Strand = Plus / Plus
Query: 965 aatgaacctggtgcactgatgaatcttgtagaagaatcaactgccgatgatgcagatgat 1024
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aatgaacctggtgcactgatgaatcttgtagaagaatcaactgctgatgatgcagatgat 60
Query: 1025 gatgatactaaagattgtaaaggtttatttaagaacttaaagttctacttgagtcgagag 1084
|| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 61 gacgatactaaagaatgtaaaggtttatttaagaacttaaagttctacctgagtcgggag 120
Query: 1085 gtgcctagggagtccctgttatttataattccagcgtttggagggactgtttcatgggaa 1144
|||||||||||||| || |||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 121 gtgcctagggagtctctattatttattatcccagcatttggagggactgtttcatgggaa 180
Query: 1145 ggagaaggagctccatttaaagaaatagacgaagatatcactcaccagattgttgatagg 1204
|||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||
Sbjct: 181 ggagaaggagctccatttaaagaagtagatgaagatatcacccaccagattgttgatagg 240
Query: 1205 ccgacacaaagccatgttttcctctccagggagtatgttcaaccacagtgggtctttgat 1264
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 ccgacacaaagccatgttttcctctccagggagtatgttcaaccgcagtgggtctttgat 300
Query: 1265 tgtgtaaatgctcgtatcatattgccaacagaaggttatcttgttggaagagtacctcca 1324
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgtaaacgctcgtatcatattgccaacagaaggttatcttgttggaagagtacctcca 360
Query: 1325 ccacatttgtctccttttgtggacaatgatgccgagggctacatgcctgagtatgcagag 1384
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 361 ccacatttgtctccttttgtggacaatgatgcagagggctacattcctgagtatgcagaa 420
Query: 1385 acaataaagaggctccaagctgctgctcgcaatgaggtgttgcctcttccaggtattggt 1444
|||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 421 acaataaagaggctgcaagctgctgctcgcaatgaggtcttgcctcttcctggtattggt 480
Query: 1445 gatgaagatctagacaattcactggtagcagcaatgatggatcgaacagcttctaacgaa 1504
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 481 gatgaagatctagacaattcattggtagcagcaatgatggatcgaacagaatctaacgaa 540
Query: 1505 gctgctgaaaagaagaggaagctggagatgctagagaagcaatacatcgatgaactgaag 1564
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 541 gctgctgaaaagaagaggaagttggagatgctagagaagcaataccatgatgaactgaag 600
Query: 1565 aaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagcagataaatcaccg 1624
| ||||||||| || ||||||||||||||| ||||||| ||||||||| ||||||||||
Sbjct: 601 atggaaattgacggtgttgctttctctagtctgtcaaataaggaagcaaataaatcacca 660
Query: 1625 aatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaacaagaggaggat 1684
|||| |||||||||||||||||||||| |||| |||||||| |||| |||||||| |
Sbjct: 661 gatgccaaagatgatactcagtcagatcacgaggcggatgccattaaaaaagaggagaag 720
Query: 1685 gatgatgatgatattggtactgctctcatgtctcgcaagcagagaggcctttataa 1740
||||||||||| ||||||||||||||||| | | |||||||| ||||||||||||
Sbjct: 721 gatgatgatgacattggtactgctctcatatatggcaagcagcaaggcctttataa 776
>gb|CD213833.1|CD213833 HS1_53_D04.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_53_D04_A012 5', mRNA sequence
Length = 716
Score = 1061 bits (535), Expect = 0.0
Identities = 617/643 (95%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 131
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 191
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 192 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 251
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 311
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 312 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 371
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 372 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 431
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 491
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 492 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 551
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaa-gg 539
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 552 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 611
Query: 540 gcatatattatcaggccgaagttcaaggacaaaagatcacctggctaactccgcatgctc 599
||||||||| ||||| ||||||||||| |||||||||||||||||| || |||||||
Sbjct: 612 gcatatatttccaggctgaagttcaagggacaaagatcacctggctaacccctcatgctc 671
Query: 600 ttcagcaagtattaactgatgatgttgatttcaatgtgatgct 642
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 672 ttcagcaagtattaaccgatgatgttgatttcaatgtgatgct 714
>gb|CD206398.1|CD206398 HS1_22_D08.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_22_D08_A012 5', mRNA sequence
Length = 680
Score = 1035 bits (522), Expect = 0.0
Identities = 587/609 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 131
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 191
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 192 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 251
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 311
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 312 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 371
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 372 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 431
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 491
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 492 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 551
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 552 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 611
Query: 541 catatattatcaggccgaagttcaaggacaaaagatcacctggctaactccgcatgctct 600
||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 612 catatatntccaggctgaagttcaaggacaaaagatcacctggctaacccctcatgctct 671
Query: 601 tcagcaagt 609
|||||||||
Sbjct: 672 tcagcaagt 680
>gb|CD233368.1|CD233368 SS1_13_D12.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_13_D12_A012 5', mRNA sequence
Length = 665
Score = 1015 bits (512), Expect = 0.0
Identities = 569/588 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 131
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 191
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 192 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 251
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 311
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 312 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 371
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 372 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 431
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 491
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 492 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 551
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 552 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 611
Query: 541 catatattatcaggccgaagttcaaggacaaaagatcacctggctaac 588
|||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 612 catatatttccaggctgaagttcaaggacaaaagatcacctggctaac 659
>gb|CD223690.1|CD223690 CCC1_29_E05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_29_E05_A007 5', mRNA sequence
Length = 666
Score = 1011 bits (510), Expect = 0.0
Identities = 575/597 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 129
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 130 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 189
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 249
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 309
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 310 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 369
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 370 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 429
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 489
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 490 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 549
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 550 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 609
Query: 541 catatattatcaggccgaagttcaaggacaaaagatcacctggctaactccgcatgc 597
|||||||| ||||| ||||||||||||| |||||||||||||||||| || |||||
Sbjct: 610 catatatttccaggctgaagttcaaggacnaaagatcacctggctaacccctcatgc 666
>gb|CD212234.1|CD212234 HS1_71_C09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_71_C09_A012 5', mRNA sequence
Length = 653
Score = 987 bits (498), Expect = 0.0
Identities = 555/574 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 80 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 139
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 140 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 199
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 200 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 259
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 319
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 379
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 380 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 439
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 499
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 500 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 559
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 560 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttccgtcaaggg 619
Query: 541 catatattatcaggccgaagttcaaggacaaaag 574
|||||||| ||||| ||||||||||||||||||
Sbjct: 620 catatatttccaggctgaagttcaaggacaaaag 653
>gb|BF656485.1|BF656485 FM1_50_E10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 595
Score = 969 bits (489), Expect = 0.0
Identities = 552/573 (96%)
Strand = Plus / Minus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 514
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 513 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 454
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 453 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 394
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 334
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 333 aaagaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 274
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 273 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacatttgttga 214
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 213 tgctcttcgtgacttggatgactgtcttacaatggtgcatctgtttgcggcattacctgc 154
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 153 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 94
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatttatttccgtgaaggg 540
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 93 atggcaagcatacatatcccgaactcattccctgaggaagacatttatttctgtgaaggg 34
Query: 541 catatattatcaggccgaagttcaaggacaaaa 573
|||||||| ||||| ||| |||||||||||||
Sbjct: 33 catatatttccaggctgaaattcaaggacaaaa 1
>gb|CD212213.1|CD212213 HS1_71_C09.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_71_C09_A012 3', mRNA sequence
Length = 654
Score = 959 bits (484), Expect = 0.0
Identities = 610/652 (93%)
Strand = Plus / Plus
Query: 1103 ttatttataattccagcgtttggagggactgtttcatgggaaggagaaggagctccattt 1162
|||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttatttattatcccagcatttggagggactgtttcatgggaaggagaaggagctccattt 61
Query: 1163 aaagaaatagacgaagatatcactcaccagattgttgataggccgacacaaagccatgtt 1222
|||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaagaagtagatgaagatatcacccaccagattgttgataggccgacacaaagccatgtt 121
Query: 1223 ttcctctccagggagtatgttcaaccacagtgggtctttgattgtgtaaatgctcgtatc 1282
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 122 ttcctctccagggagtatgttcaaccgcagtgggtctttgattgtgtaaacgctcgtatc 181
Query: 1283 atattgccaacagaaggttatcttgttggaagagtacctccaccacatttgtctcctttt 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atattgccaacagaaggttatcttgttggaagagtacctccaccacatttgtctcctttt 241
Query: 1343 gtggacaatgatgccgagggctacatgcctgagtatgcagagacaataaagaggctccaa 1402
|||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 242 gtggacaatgatgcagagggctacattcctgagtatgcagaaacaataaagaggctgcaa 301
Query: 1403 gctgctgctcgcaatgaggtgttgcctcttccaggtattggtgatgaagatctagacaat 1462
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||
Sbjct: 302 gctgctgctcgcaatgaggtcttgcctcttcctggtattagtgatgaagatctagacaat 361
Query: 1463 tcactggtagcagcaatgatggatcgaacagcttctaacgaagctgctgaaaagaagagg 1522
|| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 362 tcgttggtagcagcaatgatggatcgaacagaatctaacgaagctgctgaaaagaagagg 421
Query: 1523 aagctggagatgctagagaagcaatacatcgatgaactgaagaaggaaattgatggcgtt 1582
||| ||||||||||||||||||||||| ||||||||||||| ||||||||| || |||
Sbjct: 422 aagttggagatgctagagaagcaataccatgatgaactgaagatggaaattgacggtgtt 481
Query: 1583 gctttctctagtttgtcaaacaaggaagcagataaatcaccgaatgcaaaagatgatact 1642
|||||||||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||
Sbjct: 482 gctttctctagtctgtcaaataaggaagcaaataaatcaccagatgccaaagatgatact 541
Query: 1643 cagtcagatcgtgaggaggatgccagtaaacaagaggaggatgatgatgatgatattggt 1702
|||||||||| |||| |||||||| ||||||||||||| | ||||||||||| ||||||
Sbjct: 542 cagtcagatcacgaggcggatgccattaaacaagaggagaaggatgatgatgacattggt 601
Query: 1703 actgctctcatgtctcgcaagcagagaggcctttataaggctatgaagatgg 1754
|||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 602 actgctctcatgtctcgcaagcagcaaggcctttataaagctatgaagatgg 653
>gb|CD222032.1|CD222032 CCC1_1_F02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_F02_A007 5', mRNA sequence
Length = 579
Score = 954 bits (481), Expect = 0.0
Identities = 553/577 (95%)
Strand = Plus / Plus
Query: 713 aattatcctcctattctggatccacgtctggaagctttagctgctgagctctatgcattg 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aattatcctcctattctggatccacgtctggaagctttagctgctgagctctatgcattg 62
Query: 773 tgccgatacatgtctgctggttccagaagaatgattgggaattcacaaactgacgaagta 832
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 63 tgccgatacatgtctgctggttccagaagaatgattgggaattcacaatctgacgaagta 122
Query: 833 atggaagataaggatgagaaaagtaaagctgaggaagtaattgaggaagagaaggttgtg 892
||||| |||||||||||||| ||||||||||| | | ||| |||||||||||||| ||||
Sbjct: 123 atggaggataaggatgagaagagtaaagctgatggaataactgaggaagagaaggatgtg 182
Query: 893 aagaataaagcaagctcaaaagcagatgaatctgagctcagattagcacagcttcaacat 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagaataaagcaagctcaaaagcagatgaatctgagctcagattagcacagcttcaacat 242
Query: 953 cagctcccaaccaatgaacctggtgcactgatgaatcttgtagaagaatcaactgccgat 1012
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 243 cagctcccaactaatgaacctggtgcactgatgaatcttgtagaagaatcaactgctgat 302
Query: 1013 gatgcagatgatgatgatactaaagattgtaaaggtttatttaagaacttaaagttctac 1072
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 303 gatgcagatgatgacgatactaaagaatgtaaaggtttatttaagaacttaaagttctac 362
Query: 1073 ttgagtcgagaggtgcctagggagtccctgttatttataattccagcgtttggagggact 1132
||||||| ||||||||||||||||| || |||||||| || ||||| ||||||||||||
Sbjct: 363 ctgagtcgggaggtgcctagggagtctctattatttattatcccagcatttggagggact 422
Query: 1133 gtttcatgggaaggagaaggagctccatttaaagaaatagacgaagatatcactcaccag 1192
|||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 423 gtttcatgggaaggagaaggagctccatttaaagaagtagatgaagatatcacccaccag 482
Query: 1193 attgttgataggccgacacaaagccatgttttcctctccagggagtatgttcaaccacag 1252
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 483 attgttgataggccgacacaaagccatgttttcctctccagggagtatgttcaaccgcag 542
Query: 1253 tgggtctttgattgtgtaaatgctcgtatcatattgc 1289
|||||||||||||||||||| ||||||||||||||||
Sbjct: 543 tgggtctttgattgtgtaaacgctcgtatcatattgc 579
>gb|BM322589.1|BM322589 PIC1_6_G03.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 594
Score = 950 bits (479), Expect = 0.0
Identities = 557/583 (95%)
Strand = Plus / Plus
Query: 801 gaatgattgggaattcacaaactgacgaagtaatggaagataaggatgagaaaagtaaag 860
|||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||
Sbjct: 9 gaatgattgggaattcacaatctgacgaagtaatggaggataaggatgagaagagtaaag 68
Query: 861 ctgaggaagtaattgaggaagagaaggttgtgaagaataaagcaagctcaaaagcagatg 920
|||| | | ||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 69 ctgatggaataactgaggaagagaaggatgtgaagaataaagcaagctcaaaagcagatg 128
Query: 921 aatctgagctcagattagcacagcttcaacatcagctcccaaccaatgaacctggtgcac 980
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 129 aatctgagctcagattagcacagcttcaacatcagctcccaactaatgaacctggtgcac 188
Query: 981 tgatgaatcttgtagaagaatcaactgccgatgatgcagatgatgatgatactaaagatt 1040
|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 189 tgatgaatcttgtagaagaatcaactgctgatgatgcagatgatgacgatactaaagaat 248
Query: 1041 gtaaaggtttatttaagaacttaaagttctacttgagtcgagaggtgcctagggagtccc 1100
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
Sbjct: 249 gtaaaggtttatttaagaacttaaagttctacctgagtcgggaggtgcctagggagtctc 308
Query: 1101 tgttatttataattccagcgtttggagggactgtttcatgggaaggagaaggagctccat 1160
| |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tattatttattatcccagcatttggagggactgtttcatgggaaggagaaggagctccat 368
Query: 1161 ttaaagaaatagacgaagatatcactcaccagattgttgataggccgacacaaagccatg 1220
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 369 ttaaagaagtagatgaagatatcacccaccagattgttgataggccgacacaaagccatg 428
Query: 1221 ttttcctctccagggagtatgttcaaccacagtgggtctttgattgtgtaaatgctcgta 1280
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 429 ttttcctctccagggagtatgttcaaccgcagtgggtctttgattgtgtaaacgctcgta 488
Query: 1281 tcatattgccaacagaaggttatcttgttggaagagtacctccaccacatttgtctcctt 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcatattgccaacagaaggttatcttgttggaagagtacctccaccacatttgtctcctt 548
Query: 1341 ttgtggacaatgatgccgagggctacatgcctgagtatgcaga 1383
|||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 549 ttgtggacaatgatgcagagggctacattcctgagtatgcaga 591
>gb|CD228982.1|CD228982 CCC1_11_C01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_11_C01_A007 3', mRNA sequence
Length = 631
Score = 948 bits (478), Expect = 0.0
Identities = 589/626 (94%)
Strand = Plus / Plus
Query: 1115 ccagcgtttggagggactgtttcatgggaaggagaaggagctccatttaaagaaatagac 1174
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2 ccagcatttggagggactgtttcatgggaaggagaaggagctccatttaaagaagtagat 61
Query: 1175 gaagatatcactcaccagattgttgataggccgacacaaagccatgttttcctctccagg 1234
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gaagatatcacccaccagattgttgataggccgacacaaagccatgttttcctctccagg 121
Query: 1235 gagtatgttcaaccacagtgggtctttgattgtgtaaatgctcgtatcatattgccaaca 1294
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 122 gagtatgttcaaccgcagtgggtctttgattgtgtaaacgctcgtatcatattgccaaca 181
Query: 1295 gaaggttatcttgttggaagagtacctccaccacatttgtctccttttgtggacaatgat 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaaggttatcttgttggaagagtacctccaccacatttgtctccttttgtggacaatgat 241
Query: 1355 gccgagggctacatgcctgagtatgcagagacaataaagaggctccaagctgctgctcgc 1414
|| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 242 gcagagggctacattcctgagtatgcagaaacaataaagaggctgcaagctgctgctcgc 301
Query: 1415 aatgaggtgttgcctcttccaggtattggtgatgaagatctagacaattcactggtagca 1474
|||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 302 aatgaggtcttgcctcttcctggtattggtgatgaagatctagacaattcattggtagca 361
Query: 1475 gcaatgatggatcgaacagcttctaacgaagctgctgaaaagaagaggaagctggagatg 1534
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 362 gcaatgatggatcgaacagaatctaacgaagctgctgaaaagaagaggaagttggagatg 421
Query: 1535 ctagagaagcaatacatcgatgaactgaagaaggaaattgatggcgttgctttctctagt 1594
||||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 422 ctagagaagcaataccatgatgaactgaagatggaaattgacggtgttgctttctctagt 481
Query: 1595 ttgtcaaacaaggaagcagataaatcaccgaatgcaaaagatgatactcagtcagatcgt 1654
||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||
Sbjct: 482 ctgtcaaataaggaagcaaataaatcaccagatgccaaagatgatactcagtcagatcac 541
Query: 1655 gaggaggatgccagtaaacaagaggaggatgatgatgatgatattggtactgctctcatg 1714
|||| |||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 542 gaggcggatgccattaaacaagaggagaaggatgatgatgacattggtactgctctcatg 601
Query: 1715 tctcgcaagcagagaggcctttataa 1740
|||||||||||| ||||||||||||
Sbjct: 602 tctcgcaagcagcaaggcctttataa 627
>gb|CD234768.1|CD234768 SS1_17_F10.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_17_F10_A012 5', mRNA sequence
Length = 596
Score = 936 bits (472), Expect = 0.0
Identities = 566/596 (94%), Gaps = 1/596 (0%)
Strand = Plus / Plus
Query: 536 aagggcatatattatcaggccgaagttcaaggacaaaagatcacctg-gctaactccgca 594
||||||||||||| ||||| |||||||||||||||||||||||||| |||||| || ||
Sbjct: 1 aagggcatatatttccaggctgaagttcaaggacaaaagatcacctgngctaacccctca 60
Query: 595 tgctcttcagcaagtattaactgatgatgttgatttcaatgtgatgctttcttttctaga 654
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 61 tgctcttcagcaagtattaaccgatgatgttgatttcaatgtgatgctctcttttctaga 120
Query: 655 attctatgagactcttctaggatttgtgaacttcaaactctatcattcaataaatgtaaa 714
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 attctatgagactcttttaggatttgtgaacttcaagctctatcattcaataaatgtaaa 180
Query: 715 ttatcctcctattctggatccacgtctggaagctttagctgctgagctctatgcattgtg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttatcctcctattctggatccacgtctggaagctttagctgctgagctctatgcattgtg 240
Query: 775 ccgatacatgtctgctggttccagaagaatgattgggaattcacaaactgacgaagtaat 834
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 241 ccgatacatgtctgctggttccagaagaatgattgagaattcacaatctgacgaagtaat 300
Query: 835 ggaagataaggatgagaaaagtaaagctgaggaagtaattgaggaagagaaggttgtgaa 894
||| |||||||||||||| |||||||| || | ||||| |||||||||||||| ||||||
Sbjct: 301 ggaggataaggatgagaagagtaaagcagatggagtaactgaggaagagaaggatgtgaa 360
Query: 895 gaataaagcaagctcaaaagcagatgaatctgagctcagattagcacagcttcaacatca 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaataaagcaagctcaaaagcagatgaatctgagctcagattagcacagcttcaacatca 420
Query: 955 gctcccaaccaatgaacctggtgcactgatgaatcttgtagaagaatcaactgccgatga 1014
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 gctcccaactaatgaacctggtgcactgatgaatcttgtagaagaatcaactgctgatga 480
Query: 1015 tgcagatgatgatgatactaaagattgtaaaggtttatttaagaacttaaagttctactt 1074
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 481 tgcagatgatgacgatactaaagaatgtaaaggtttatttaagaacttaaagttctacct 540
Query: 1075 gagtcgagaggtgcctagggagtccctgttatttataattccagcgtttggaggga 1130
|||||| ||||||||||||||||| || |||||||| || ||||| ||||||||||
Sbjct: 541 gagtcgggaggtgcctagggagtctctattatttattatcccagcatttggaggga 596
>gb|CD206376.1|CD206376 HS1_22_D08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_22_D08_A012 3', mRNA sequence
Length = 627
Score = 932 bits (470), Expect = 0.0
Identities = 584/622 (93%)
Strand = Plus / Plus
Query: 1133 gtttcatgggaaggagaaggagctccatttaaagaaatagacgaagatatcactcaccag 1192
|||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 1 gtttcatgggaaggagaaggagctccatttaaagaagtagatgaagatatcacccaccag 60
Query: 1193 attgttgataggccgacacaaagccatgttttcctctccagggagtatgttcaaccacag 1252
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 attgttgataggccgacacaaagccatgttttcctctccagggagtatgttcaaccgcag 120
Query: 1253 tgggtctttgattgtgtaaatgctcgtatcatattgccaacagaaggttatcttgttgga 1312
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggtctttgattgtgtaaacgctcgtatcatattgccaacagaaggttatcttgttgga 180
Query: 1313 agagtacctccaccacatttgtctccttttgtggacaatgatgccgagggctacatgcct 1372
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 181 agagtacctccaccacatttgtctccttttgtggacaatgatgcagagggctacattcct 240
Query: 1373 gagtatgcagagacaataaagaggctccaagctgctgctcgcaatgaggtgttgcctctt 1432
||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 241 gagtatgcagaaacaataaagaggctgcaagctgctgctcgcaatgaggtcttgcctctt 300
Query: 1433 ccaggtattggtgatgaagatctagacaattcactggtagcagcaatgatggatcgaaca 1492
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 301 cctggtattggtgatgaagatctagacaattcgttggtagcagcaatgatggatcgaaca 360
Query: 1493 gcttctaacgaagctgctgaaaagaagaggaagctggagatgctagagaagcaatacatc 1552
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 gaatctaacgaagctgctgaaaagaagaggaagttggagatgctagagaagcaataccat 420
Query: 1553 gatgaactgaagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagca 1612
||||||||||||| ||||||||| || ||||||||||||||| ||||||| |||||||||
Sbjct: 421 gatgaactgaagatggaaattgacggtgttgctttctctagtctgtcaaataaggaagca 480
Query: 1613 gataaatcaccgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaa 1672
|||||||||| |||| |||||||||||||||||||||| |||| |||||||| ||||
Sbjct: 481 aataaatcaccagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaa 540
Query: 1673 caagaggaggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggc 1732
||||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 541 caagaggagaaggatgatgatgacattggtactgctctcatgtctcgcaagcagcaaggc 600
Query: 1733 ctttataaggctatgaagatgg 1754
|||||||| |||||||||||||
Sbjct: 601 ctttataaagctatgaagatgg 622
>gb|CD224973.1|CD224973 CCC1_37_B06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B06_A007 5', mRNA sequence
Length = 594
Score = 922 bits (465), Expect = 0.0
Identities = 510/525 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 129
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 130 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 189
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 249
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 309
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 310 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 369
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 370 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 429
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 489
Query: 421 tgttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatga 480
|||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 490 tgttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatga 549
Query: 481 atggcaagcatacatatcccgaacccattctctgaggaagacatt 525
|||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 550 atggcaagcatacatatcccgaactcattccctgaggaagacatt 594
>gb|BF587121.1|BF587121 FM1_32_E01.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 462
Score = 777 bits (392), Expect = 0.0
Identities = 434/448 (96%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 74
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 75 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtttt 134
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 194
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 254
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 255 aaagaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 314
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 315 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacatttgttga 374
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 375 tgctcttcgtgacttggatgactgtcttacaatggtgcatctgtttgcggcattacctgc 434
Query: 421 tgttgacggtgaacgtgttgaggtcaaa 448
|||||| |||||||| ||||| ||||||
Sbjct: 435 tgttgatggtgaacgcgttgaagtcaaa 462
>gb|CF070812.1|CF070812 FE1_4_C02.g1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_4_C02_A002 5', mRNA sequence
Length = 528
Score = 777 bits (392), Expect = 0.0
Identities = 434/448 (96%)
Strand = Plus / Plus
Query: 63 actacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctttc 122
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 77 actacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctttc 136
Query: 123 cacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaaggata 182
| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 137 cgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaaggata 196
Query: 183 ttgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcgaa 242
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 197 ttgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccttcgaa 256
Query: 243 ggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaatc 302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 257 ggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaatc 316
Query: 303 ggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttgatg 362
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 317 ggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttgatg 376
Query: 363 ctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgctg 436
Query: 423 ttgacggtgaacgtgttgaggtcaaacgaatccataactgccgcaggttaagccatgaat 482
|||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 437 ttgatggtgaacgcgttgaagtcaaacgaattcataactgccgcaggttaagccatgaat 496
Query: 483 ggcaagcatacatatcccgaacccattc 510
|||||||||||||||||||||| |||||
Sbjct: 497 ggcaagcatacatatcccgaactcattc 524
>gb|AW287263.2|AW287263 LG1_268_G03.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 488
Score = 771 bits (389), Expect = 0.0
Identities = 416/425 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 123
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 124 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 183
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 184 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 243
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 303
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 304 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 363
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 364 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 423
Query: 361 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcattacctgc 483
Query: 421 tgttg 425
|||||
Sbjct: 484 tgttg 488
>gb|BG241249.1|BG241249 OV1_40_A03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 467
Score = 728 bits (367), Expect = 0.0
Identities = 436/459 (94%)
Strand = Plus / Plus
Query: 1154 gctccatttaaagaaatagacgaagatatcactcaccagattgttgataggccgacacaa 1213
||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 8 gctccatttaaagaagtagatgaagatatcacccaccagattgttgataggccgacacaa 67
Query: 1214 agccatgttttcctctccagggagtatgttcaaccacagtgggtctttgattgtgtaaat 1273
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 68 agccatgttttcctctccagggagtatgttcaaccgcagtgggtctttgattgtgtaaac 127
Query: 1274 gctcgtatcatattgccaacagaaggttatcttgttggaagagtacctccaccacatttg 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gctcgtatcatattgccaacagaaggttatcttgttggaagagtacctccaccacatttg 187
Query: 1334 tctccttttgtggacaatgatgccgagggctacatgcctgagtatgcagagacaataaag 1393
||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 188 tctccttttgtggacaatgatgcagagggctacattcctgagtatgcagaaacaataaag 247
Query: 1394 aggctccaagctgctgctcgcaatgaggtgttgcctcttccaggtattggtgatgaagat 1453
||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 248 aggctgcaagctgctgctcgcaatgaggtcttgcctcttcctggtattggtgatgaagat 307
Query: 1454 ctagacaattcactggtagcagcaatgatggatcgaacagcttctaacgaagctgctgaa 1513
|||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 308 ctagacaattcattggtagcagcaatgatggatcgaacagaatctaacgaagctgctgaa 367
Query: 1514 aagaagaggaagctggagatgctagagaagcaatacatcgatgaactgaagaaggaaatt 1573
|||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 368 aagaagaggaagttggagatgctagagaagcaataccatgatgaactgaagatggaaatt 427
Query: 1574 gatggcgttgctttctctagtttgtcaaacaaggaagca 1612
|| || ||||||||||||||| ||||||| |||||||||
Sbjct: 428 gacggtgttgctttctctagtctgtcaaataaggaagca 466
>gb|CN129198.1|CN129198 RHOH1_34_C04.b3_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_34_C04_A002 3', mRNA sequence
Length = 774
Score = 724 bits (365), Expect = 0.0
Identities = 613/686 (89%), Gaps = 11/686 (1%)
Strand = Plus / Plus
Query: 1337 ccttttgtggacaatgatgccgagggctacatgcctgagtatgcagagacaataaagagg 1396
|||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 ccttttgtggacaatgatgcagagggctacattcctgagtatgcagaaacaataaagagg 60
Query: 1397 ctccaagctgctgctcgcaatgaggtgttgcctcttccaggtattggtgatgaagatcta 1456
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 61 ctgcaagctgctgctcgcaatgaggtcttgcctcttcctggtattggtgatgaagatcta 120
Query: 1457 gacaattcactggtagcagcaatgatggatcgaacagcttctaacgaagctgctgaaaag 1516
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 gacaattcattggtagcagcaatgatggatcgaacagaatctaacgaagctgctgaaaag 180
Query: 1517 aagaggaagctggagatgctagagaagcaatacatcgatgaactgaagaaggaaattgat 1576
||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 181 aagaggaagttggagatgctagagaagcaataccatgatgaactgaagatggaaattgac 240
Query: 1577 ggcgttgctttctctagtttgtcaaacaaggaagcagataaatcaccgaatgcaaaagat 1636
|| ||||||||||||||| ||||||| ||||||||| |||||||||| |||| ||||||
Sbjct: 241 ggtgttgctttctctagtctgtcaaataaggaagcaaataaatcaccagatgccaaagat 300
Query: 1637 gatactcagtcagatcgtgaggaggatgccagtaaacaagaggaggatgatgatgatgat 1696
|||||||||||||||| |||| |||||||| ||||||||||||| | |||||||||||
Sbjct: 301 gatactcagtcagatcacgaggcggatgccattaaacaagaggagaaggatgatgatgac 360
Query: 1697 attggtactgctctcatgtctcgcaagcagagaggcctttataaggctatgaagatgggc 1756
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 361 attggtactgctctcatgtctcgcaagcagcaaggcctttataaagctatgaagatgggc 420
Query: 1757 aaagaaaagaaaaaggagaaagttgagctactcaagaagagaaaaaagaacgcggattct 1816
|||||||||||||| |||||| |||||||||| |||||||| |||||||| |||||||||
Sbjct: 421 aaagaaaagaaaaaagagaaaattgagctacttaagaagaggaaaaagaatgcggattct 480
Query: 1817 ggcgcttcttccaagaagcggcactgatgtgtcacaaat--cttcatcgcattggtgtgt 1874
| |||||||||||||||||||||||||| ||| | | |||||| |||||||||||
Sbjct: 481 agtgcttcttccaagaagcggcactgatg-ctcagagttcgcttcatagcattggtgtgg 539
Query: 1875 catctctagtagaaatgttaccatgatcagctctgcgtgccaatcccccatgatgggtgg 1934
|||||||||||| |||||| ||||||||| ||| |||||||| ||| | ||| || |
Sbjct: 540 catctctagtag-aatgttgccatgatca--tcttcgtgccaagtccctgttatgagt-g 595
Query: 1935 gttgccttttgata--tctgctatgtatgcttaagatgagttcaagg-atatgtaacatg 1991
|||| |||||||| ||| ||||||||||| |||||||| | |||| ||||||| || |
Sbjct: 596 gttgtattttgatatctctcctatgtatgctgaagatgagcttaaggaatatgtaccagg 655
Query: 1992 aaacttgaa-tagaaaagttttgatc 2016
||||||||| | ||||||||||||||
Sbjct: 656 aaacttgaattggaaaagttttgatc 681
>gb|CD213741.1|CD213741 HS1_53_D04.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_53_D04_A012 3', mRNA sequence
Length = 699
Score = 704 bits (355), Expect = 0.0
Identities = 603/676 (89%), Gaps = 11/676 (1%)
Strand = Plus / Plus
Query: 1347 acaatgatgccgagggctacatgcctgagtatgcagagacaataaagaggctccaagctg 1406
|||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 1 acaatgatgcagagggctacattcctgagtatgcagaaacaataaagaggctgcaagctg 60
Query: 1407 ctgctcgcaatgaggtgttgcctcttccaggtattggtgatgaagatctagacaattcac 1466
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 ctgctcgcaatgaggtcttgcctcttcctggtattggtgatgaagatctagacaattcgt 120
Query: 1467 tggtagcagcaatgatggatcgaacagcttctaacgaagctgctgaaaagaagaggaagc 1526
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 tggtagcagcaatgatggatcgaacagaatctaacgaagctgctgaaaagaagaggaagt 180
Query: 1527 tggagatgctagagaagcaatacatcgatgaactgaagaaggaaattgatggcgttgctt 1586
||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||||
Sbjct: 181 tggagatgctagagaagcaataccatgatgaactgaagatggaaattgacggtgttgctt 240
Query: 1587 tctctagtttgtcaaacaaggaagcagataaatcaccgaatgcaaaagatgatactcagt 1646
|||||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||||
Sbjct: 241 tctctagtctgtcaaataaggaagcaaataaatcaccagatgccaaagatgatactcagt 300
Query: 1647 cagatcgtgaggaggatgccagtaaacaagaggaggatgatgatgatgatattggtactg 1706
|||||| |||| |||||||| ||||||||||||| | ||||||||||| ||||||||||
Sbjct: 301 cagatcacgaggcggatgccattaaacaagaggagaaggatgatgatgacattggtactg 360
Query: 1707 ctctcatgtctcgcaagcagagaggcctttataaggctatgaagatgggcaaagaaaaga 1766
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 361 ctctcatgtctcgcaagcagcaaggcctttataaagctatgaagatgggcaaagaaaaga 420
Query: 1767 aaaaggagaaagttgagctactcaagaagagaaaaaagaacgcggattctggcgcttctt 1826
|||| |||||| |||||||||| |||||||| |||||||| ||||||||| | |||||||
Sbjct: 421 aaaaagagaaaattgagctacttaagaagaggaaaaagaatgcggattctagtgcttctt 480
Query: 1827 ccaagaagcggcactgatgtgtcacaaat--cttcatcgcattggtgtgtcatctctagt 1884
||||||||||||||||||| ||| | | |||||||||||||||||| ||||||||||
Sbjct: 481 ccaagaagcggcactgatg-ctcagagttcgcttcatcgcattggtgtggcatctctagt 539
Query: 1885 agaaatgttaccatgatcagctctgcgtgccaatcccccatgatgggtgggttgcctttt 1944
|| |||||| ||||||||| ||| |||||||| ||| | ||| || ||||| ||||
Sbjct: 540 ag-aatgttgccatgatca--tcttcgtgccaagtccctgttatgagt-ggttgtatttt 595
Query: 1945 gata--tctgctatgtatgcttaagatgagttcaagg-atatgtaacatgaaacttgaa- 2000
|||| ||| ||||||||||| |||||||| | |||| ||||||| || ||||||||||
Sbjct: 596 gatatctctcctatgtatgctgaagatgagcttaaggaatatgtaccaggaaacttgaat 655
Query: 2001 tagaaaagttttgatc 2016
| ||||||||||||||
Sbjct: 656 tggaaaagttttgatc 671
>gb|BG463075.1|BG463075 EM1_47_C02.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 445
Score = 700 bits (353), Expect = 0.0
Identities = 422/445 (94%)
Strand = Plus / Plus
Query: 753 ctgctgagctctatgcattgtgccgatacatgtctgctggttccagaagaatgattggga 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgctgagctctatgcattgtgccgatacatgtctgctggttccagaagaatgattggga 60
Query: 813 attcacaaactgacgaagtaatggaagataaggatgagaaaagtaaagctgaggaagtaa 872
|||||||| |||||||||||||||| |||||||||||||| ||||||||||| | | |||
Sbjct: 61 attcacaatctgacgaagtaatggaggataaggatgagaagagtaaagctgatggaataa 120
Query: 873 ttgaggaagagaaggttgtgaagaataaagcaagctcaaaagcagatgaatctgagctca 932
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgaggaagagaaggatgtgaagaataaagcaagctcaaaagcagatgaatctgagctca 180
Query: 933 gattagcacagcttcaacatcagctcccaaccaatgaacctggtgcactgatgaatcttg 992
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 181 gattagcacagcttcaacatcagctcccaactaatgaacctggtgcactgatgaatcttg 240
Query: 993 tagaagaatcaactgccgatgatgcagatgatgatgatactaaagattgtaaaggtttat 1052
|||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 241 tagaagaatcaactgctgatgatgcagatgatgacgatactaaagaatgtaaaggtttat 300
Query: 1053 ttaagaacttaaagttctacttgagtcgagaggtgcctagggagtccctgttatttataa 1112
|||||||||||||||||||| ||||||| |||||||||| |||||| || |||||||| |
Sbjct: 301 ttaagaacttaaagttctacctgagtcgggaggtgcctacggagtctctattatttatta 360
Query: 1113 ttccagcgtttggagggactgtttcatgggaaggagaaggagctccatttaaagaaatag 1172
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 tcccagcatttggagggactgtttcatgggaaggagaaggagctccatttaaagaagtag 420
Query: 1173 acgaagatatcactcaccagattgt 1197
| ||||||||||| |||||||||||
Sbjct: 421 atgaagatatcacccaccagattgt 445
>gb|CD229063.1|CD229063 CCC1_11_C01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_11_C01_A007 5', mRNA sequence
Length = 456
Score = 698 bits (352), Expect = 0.0
Identities = 379/388 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 128
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 129 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 188
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 189 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 248
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 308
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 309 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 368
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattcgttga 360
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 369 tcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacatttgttga 428
Query: 361 tgctcttcgtgacttggatgactgcctt 388
||||||||||||||||||||||||||||
Sbjct: 429 tgctcttcgtgacttggatgactgcctt 456
>gb|BG463159.1|BG463159 EM1_47_C02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 559
Score = 682 bits (344), Expect = 0.0
Identities = 461/500 (92%)
Strand = Plus / Plus
Query: 1346 gacaatgatgccgagggctacatgcctgagtatgcagagacaataaagaggctccaagct 1405
||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 1 gacaatgatgcagagggctacattcctgagtatgcagaaacaataaagaggctgcaagct 60
Query: 1406 gctgctcgcaatgaggtgttgcctcttccaggtattggtgatgaagatctagacaattca 1465
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gctgctcgcaatgaggtcttgcctcttcctggtattggtgatgaagatctagacaattca 120
Query: 1466 ctggtagcagcaatgatggatcgaacagcttctaacgaagctgctgaaaagaagaggaag 1525
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 ttggtagcagcaatgatggatcgaacagaatctaacgaagctgctgaaaagaagaggaag 180
Query: 1526 ctggagatgctagagaagcaatacatcgatgaactgaagaaggaaattgatggcgttgct 1585
||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||
Sbjct: 181 ttggagatgctagagaagcaataccatgatgaactgaagatggaaattgacggtgttgct 240
Query: 1586 ttctctagtttgtcaaacaaggaagcagataaatcaccgaatgcaaaagatgatactcag 1645
||||||||| ||||||| ||||||||| |||||||||| |||| |||||||||||||||
Sbjct: 241 ttctctagtctgtcaaataaggaagcaaataaatcaccagatgccaaagatgatactcag 300
Query: 1646 tcagatcgtgaggaggatgccagtaaacaagaggaggatgatgatgatgatattggtact 1705
||||||| |||| |||||||| ||||||||||||| | ||||||||||| |||||||||
Sbjct: 301 tcagatcacgaggcggatgccattaaacaagaggagaaggatgatgatgacattggtact 360
Query: 1706 gctctcatgtctcgcaagcagagaggcctttataaggctatgaagatgggcaaagaaaag 1765
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 361 gctctcatgtctcgcaagcagcaaggcctttataaagctatgaagatgggcaaagaaaag 420
Query: 1766 aaaaaggagaaagttgagctactcaagaagagaaaaaagaacgcggattctggcgcttct 1825
||||| |||||| |||||||||| |||||||| |||||||| ||||||||| | ||||||
Sbjct: 421 aaaaaagagaaaattgagctacttaagaagaggaaaaagaatgcggattctagtgcttct 480
Query: 1826 tccaagaagcggcactgatg 1845
||||||||||||||||||||
Sbjct: 481 tccaagaagcggcactgatg 500
>gb|CD234671.1|CD234671 SS1_17_F10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_17_F10_A012 3', mRNA sequence
Length = 687
Score = 668 bits (337), Expect = 0.0
Identities = 579/650 (89%), Gaps = 11/650 (1%)
Strand = Plus / Plus
Query: 1373 gagtatgcagagacaataaagaggctccaagctgctgctcgcaatgaggtgttgcctctt 1432
||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 1 gagtatgcagaaacaataaagaggctgcaagctgctgctcgcaatgaggtcttgcctctt 60
Query: 1433 ccaggtattggtgatgaagatctagacaattcactggtagcagcaatgatggatcgaaca 1492
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 cctggtattggtgatgaagatctagacaattcgttggtagcagcaatgatggatcgaaca 120
Query: 1493 gcttctaacgaagctgctgaaaagaagaggaagctggagatgctagagaagcaatacatc 1552
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 gaatctaacgaagctgctgaaaagaagaggaagttggagatgctagagaagcaataccat 180
Query: 1553 gatgaactgaagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagca 1612
||||||||||||| ||||||||| || ||||||||||||||| ||||||| |||||||||
Sbjct: 181 gatgaactgaagatggaaattgacggtgttgctttctctagtctgtcaaataaggaagca 240
Query: 1613 gataaatcaccgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaa 1672
|||||||||| |||| |||||||||||||||||||||| |||| |||||||| ||||
Sbjct: 241 aataaatcaccagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaa 300
Query: 1673 caagaggaggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggc 1732
||||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 301 caagaggagaaggatgatgatgacattggtactgctctcatgtctcgcaagcagcaaggc 360
Query: 1733 ctttataaggctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactcaag 1792
|||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 361 ctttataaagctatgaagatgggcaaagaaaagaaaaaagagaaaattgagctacttaag 420
Query: 1793 aagagaaaaaagaacgcggattctggcgcttcttccaagaagcggcactgatgtgtcaca 1852
||||| |||||||| ||||||||| | |||||||||||||||||||||||||| ||| |
Sbjct: 421 aagaggaaaaagaatgcggattctagtgcttcttccaagaagcggcactgatg-ctcaga 479
Query: 1853 aat--cttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagctctgc 1910
| |||||||||||||||||| |||||||||||| |||||| ||||||||| ||| |
Sbjct: 480 gttcgcttcatcgcattggtgtggcatctctagtag-aatgttgccatgatca--tcttc 536
Query: 1911 gtgccaatcccccatgatgggtgggttgccttttgata--tctgctatgtatgcttaaga 1968
||||||| ||| | ||| || ||||| |||||||| ||| ||||||||||| ||||
Sbjct: 537 gtgccaagtccctgttatgagt-ggttgtattttgatatctctcctatgtatgctgaaga 595
Query: 1969 tgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttgatc 2016
|||| | |||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 596 tgagcttaaggaatatgtaccaggaaacttgaattggaaaagttttgatc 645
>gb|CN124215.1|CN124215 RHOH1_3_G08.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_G08_A002 3', mRNA sequence
Length = 701
Score = 630 bits (318), Expect = e-178
Identities = 554/623 (88%), Gaps = 11/623 (1%)
Strand = Plus / Plus
Query: 1400 caagctgctgctcgcaatgaggtgttgcctcttccaggtattggtgatgaagatctagac 1459
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 2 caagctgctgctcgcaatgaggtcttgcctcttcctggtattggtgatgaagatctagac 61
Query: 1460 aattcactggtagcagcaatgatggatcgaacagcttctaacgaagctgctgaaaagaag 1519
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 62 aattcattggtagcagcaatgatggatcgaacagaatctaacgaagctgctgaaaagaag 121
Query: 1520 aggaagctggagatgctagagaagcaatacatcgatgaactgaagaaggaaattgatggc 1579
|||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 122 aggaagttggagatgctagagaagcaataccatgatgaactgaagatggaaattgacggt 181
Query: 1580 gttgctttctctagtttgtcaaacaaggaagcagataaatcaccgaatgcaaaagatgat 1639
||||||||||||||| ||||||| ||||||||| |||||||||| |||| |||||||||
Sbjct: 182 gttgctttctctagtctgtcaaataaggaagcaaataaatcaccagatgccaaagatgat 241
Query: 1640 actcagtcagatcgtgaggaggatgccagtaaacaagaggaggatgatgatgatgatatt 1699
||||||||||||| |||| |||||||| ||||||||||||| | ||||||||||| |||
Sbjct: 242 actcagtcagatcacgaggcggatgccattaaacaagaggagaaggatgatgatgacatt 301
Query: 1700 ggtactgctctcatgtctcgcaagcagagaggcctttataaggctatgaagatgggcaaa 1759
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 302 ggtactgctctcatgtctcgcaagcagcaaggcctttataaagctatgaagatgggcaaa 361
Query: 1760 gaaaagaaaaaggagaaagttgagctactcaagaagagaaaaaagaacgcggattctggc 1819
||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||||| |
Sbjct: 362 gaaaagaaaaaagagaaaattgagctacttaagaagaggaaaaagaatgcggattctagt 421
Query: 1820 gcttcttccaagaagcggcactgatgtgtcacaaat--cttcatcgcattggtgtgtcat 1877
|||||||||||||||||||||||||| ||| | | |||||| ||||||||||| |||
Sbjct: 422 gcttcttccaagaagcggcactgatg-ctcagagttcgcttcatagcattggtgtggcat 480
Query: 1878 ctctagtagaaatgttaccatgatcagctctgcgtgccaatcccccatgatgggtgggtt 1937
||||||||| |||||| ||||||||| ||| |||||||| ||| | ||| || ||||
Sbjct: 481 ctctagtag-aatgttgccatgatca--tcttcgtgccaagtccctgttatgagt-ggtt 536
Query: 1938 gccttttgata--tctgctatgtatgcttaagatgagttcaagg-atatgtaacatgaaa 1994
| |||||||| ||| ||||||||||| |||||||| | |||| ||||||| || ||||
Sbjct: 537 gtattttgatatctctcctatgtatgctgaagatgagcttaaggaatatgtaccaggaaa 596
Query: 1995 cttgaa-tagaaaagttttgatc 2016
|||||| | ||||||||||||||
Sbjct: 597 cttgaattggaaaagttttgatc 619
>gb|AW287192.2|AW287192 LG1_267_F08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 402
Score = 609 bits (307), Expect = e-172
Identities = 331/339 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 123
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 124 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 183
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 184 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 243
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tattgcattccttgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 303
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 304 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 363
Query: 301 tcggccaccaacttacaagcttgataggcttgtccttga 339
|||||||||||||||||| ||||||||||||||||||||
Sbjct: 364 tcggccaccaacttacaaacttgataggcttgtccttga 402
>gb|AW287217.2|AW287217 LG1_268_A04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 396
Score = 589 bits (297), Expect = e-166
Identities = 324/333 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 123
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 124 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 183
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 184 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 243
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtccatcg 240
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 244 tattgcattccttgctcatgaccctttgatcgagaagttcaaggagattaaggtccatcg 303
Query: 241 aaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctgttgaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 304 aaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctgttgaa 363
Query: 301 tcggccaccaacttacaagcttgataggcttgt 333
|||||||||||||||||| ||||||||||||||
Sbjct: 364 tcggccaccaacttacaaacttgataggcttgt 396
>gb|BM327074.1|BM327074 PIC1_6_G03.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 663
Score = 575 bits (290), Expect = e-162
Identities = 520/587 (88%), Gaps = 11/587 (1%)
Strand = Plus / Plus
Query: 1436 ggtattggtgatgaagatctagacaattcactggtagcagcaatgatggatcgaacagct 1495
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3 ggtattggtgatgaagatctagacaattcattggtagcagcaatgatggatcgaacagaa 62
Query: 1496 tctaacgaagctgctgaaaagaagaggaagctggagatgctagagaagcaatacatcgat 1555
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 63 tctaacgaagctgctgaaaagaagaggaagttggagatgctagagaagcaataccatgat 122
Query: 1556 gaactgaagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagcagat 1615
|||||||||| ||||||||| || ||||||||||||||| ||||||| ||||||||| ||
Sbjct: 123 gaactgaagatggaaattgacggtgttgctttctctagtctgtcaaataaggaagcaaat 182
Query: 1616 aaatcaccgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaacaa 1675
|||||||| |||| |||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 183 aaatcaccagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaacaa 242
Query: 1676 gaggaggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggcctt 1735
|||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 243 gaggagaaggatgatgatgacattggtactgctctcatgtctcgcaagcagcaaggcctt 302
Query: 1736 tataaggctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactcaagaag 1795
||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 303 tataaagctatgaagatgggcaaagaaaagaaaaaagagaaaattgagctacttaagaag 362
Query: 1796 agaaaaaagaacgcggattctggcgcttcttccaagaagcggcactgatgtgtcacaaat 1855
|| |||||||| ||||||||| | |||||||||||||||||||||||||| ||| | |
Sbjct: 363 aggaaaaagaatgcggattctagtgcttcttccaagaagcggcactgatg-ctcagagtt 421
Query: 1856 --cttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagctctgcgtg 1913
|||||| ||||||||||| |||||||||||| |||||| ||||||||| ||| ||||
Sbjct: 422 cgcttcatagcattggtgtggcatctctagtag-aatgttgccatgatca--tcttcgtg 478
Query: 1914 ccaatcccccatgatgggtgggttgccttttgata--tctgctatgtatgcttaagatga 1971
|||| ||| | ||| || ||||| |||||||| ||| ||||||||||| |||||||
Sbjct: 479 ccaagtccctgttatgagt-ggttgtattttgatatctctcctatgtatgctgaagatga 537
Query: 1972 gttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttgatc 2016
| | |||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 538 gcttaaggaatatgtaccaggaaacttgaattggaaaagttttgatc 584
>gb|CD221996.1|CD221996 CCC1_1_F02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_1_F02_A007 3', mRNA sequence
Length = 662
Score = 575 bits (290), Expect = e-162
Identities = 520/587 (88%), Gaps = 11/587 (1%)
Strand = Plus / Plus
Query: 1436 ggtattggtgatgaagatctagacaattcactggtagcagcaatgatggatcgaacagct 1495
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2 ggtattggtgatgaagatctagacaattcattggtagcagcaatgatggatcgaacagaa 61
Query: 1496 tctaacgaagctgctgaaaagaagaggaagctggagatgctagagaagcaatacatcgat 1555
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 62 tctaacgaagctgctgaaaagaagaggaagttggagatgctagagaagcaataccatgat 121
Query: 1556 gaactgaagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagcagat 1615
|||||||||| ||||||||| || ||||||||||||||| ||||||| ||||||||| ||
Sbjct: 122 gaactgaagatggaaattgacggtgttgctttctctagtctgtcaaataaggaagcaaat 181
Query: 1616 aaatcaccgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaacaa 1675
|||||||| |||| |||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 182 aaatcaccagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaacaa 241
Query: 1676 gaggaggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggcctt 1735
|||||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 242 gaggagaaggatgatgatgacattggtactgctctcatgtctcgcaagcagcaaggcctt 301
Query: 1736 tataaggctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactcaagaag 1795
||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||
Sbjct: 302 tataaagctatgaagatgggcaaagaaaagaaaaaagagaaaattgagctacttaagaag 361
Query: 1796 agaaaaaagaacgcggattctggcgcttcttccaagaagcggcactgatgtgtcacaaat 1855
|| |||||||| ||||||||| | |||||||||||||||||||||||||| ||| | |
Sbjct: 362 aggaaaaagaatgcggattctagtgcttcttccaagaagcggcactgatg-ctcagagtt 420
Query: 1856 --cttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagctctgcgtg 1913
|||||| ||||||||||| |||||||||||| |||||| ||||||||| ||| ||||
Sbjct: 421 cgcttcatagcattggtgtggcatctctagtag-aatgttgccatgatca--tcttcgtg 477
Query: 1914 ccaatcccccatgatgggtgggttgccttttgata--tctgctatgtatgcttaagatga 1971
|||| ||| | ||| || ||||| |||||||| ||| ||||||||||| |||||||
Sbjct: 478 ccaagtccctgttatgagt-ggttgtattttgatatctctcctatgtatgctgaagatga 536
Query: 1972 gttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttgatc 2016
| | |||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 537 gcttaaggaatatgtaccaggaaacttgaattggaaaagttttgatc 583
>gb|CD233277.1|CD233277 SS1_13_D12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_13_D12_A012 3', mRNA sequence
Length = 619
Score = 509 bits (257), Expect = e-142
Identities = 481/546 (88%), Gaps = 11/546 (2%)
Strand = Plus / Plus
Query: 1477 aatgatggatcgaacagcttctaacgaagctgctgaaaagaagaggaagctggagatgct 1536
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 aatgatggatcgaacagaatctaacgaagctgctgaaaagaagaggaagttggagatgct 60
Query: 1537 agagaagcaatacatcgatgaactgaagaaggaaattgatggcgttgctttctctagttt 1596
||||||||||||| ||||||||||||| ||||||||| || ||||||||||||||| |
Sbjct: 61 agagaagcaataccatgatgaactgaagatggaaattgacggtgttgctttctctagtct 120
Query: 1597 gtcaaacaaggaagcagataaatcaccgaatgcaaaagatgatactcagtcagatcgtga 1656
|||||| ||||||||| |||||||||| |||| |||||||||||||||||||||| ||
Sbjct: 121 gtcaaataaggaagcaaataaatcaccagatgccaaagatgatactcagtcagatcacga 180
Query: 1657 ggaggatgccagtaaacaagaggaggatgatgatgatgatattggtactgctctcatgtc 1716
|| |||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 181 ggcggatgccattaaacaagaggagaaggatgatgatgacattggtactgctctcatgtc 240
Query: 1717 tcgcaagcagagaggcctttataaggctatgaagatgggcaaagaaaagaaaaaggagaa 1776
|||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 241 tcgcaagcagcaaggcctttataaagctatgaagatgggcaaagaaaagaaaaaagagaa 300
Query: 1777 agttgagctactcaagaagagaaaaaagaacgcggattctggcgcttcttccaagaagcg 1836
| |||||||||| |||||||| |||||||| ||||||||| | |||||||||||||||||
Sbjct: 301 aattgagctacttaagaagaggaaaaagaatgcggattctagtgcttcttccaagaagcg 360
Query: 1837 gcactgatgtgtcacaaat--cttcatcgcattggtgtgtcatctctagtagaaatgtta 1894
||||||||| ||| | | |||||||||||||||||| |||||||||||| ||||||
Sbjct: 361 gcactgatg-ctcagagttcgcttcatcgcattggtgtggcatctctagtag-aatgttg 418
Query: 1895 ccatgatcagctctgcgtgccaatcccccatgatgggtgggttgccttttgata--tctg 1952
||||||||| ||| |||||||| ||| | ||| || ||||| |||||||| |||
Sbjct: 419 ccatgatca--tcttcgtgccaagtccctgttatgagt-ggttgtattttgatatctctc 475
Query: 1953 ctatgtatgcttaagatgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagtt 2010
||||||||||| |||||||| | |||| ||||||| || |||||||||| | ||||||||
Sbjct: 476 ctatgtatgctgaagatgagcttaaggaatatgtaccaggaaacttgaattggaaaagtt 535
Query: 2011 ttgatc 2016
||||||
Sbjct: 536 ttgatc 541
>gb|BG240927.1|BG240927 OV1_40_A03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 586
Score = 505 bits (255), Expect = e-141
Identities = 482/548 (87%), Gaps = 11/548 (2%)
Strand = Plus / Plus
Query: 1475 gcaatgatggatcgaacagcttctaacgaagctgctgaaaagaagaggaagctggagatg 1534
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 gcaatgatggatcgaacagaatctaacgaagctgctgaaaagaagaggaagttggagatg 60
Query: 1535 ctagagaagcaatacatcgatgaactgaagaaggaaattgatggcgttgctttctctagt 1594
||||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 61 ctagagaagcaataccatgatgaactgaagatggaaattgacggtgttgctttctctagt 120
Query: 1595 ttgtcaaacaaggaagcagataaatcaccgaatgcaaaagatgatactcagtcagatcgt 1654
||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||
Sbjct: 121 ctgtcaaataaggaagcaaataaatcaccagatgccaaagatgatactcagtcagatcac 180
Query: 1655 gaggaggatgccagtaaacaagaggaggatgatgatgatgatattggtactgctctcatg 1714
|||| |||||||| ||||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 181 gaggcggatgccattaaacaagaggagaaggatgatgatgacattggtactgctctcatg 240
Query: 1715 tctcgcaagcagagaggcctttataaggctatgaagatgggcaaagaaaagaaaaaggag 1774
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 241 tctcgcaagcagcaaggcctttataaagctatgaagatgggcaaagaaaagaaaaaagag 300
Query: 1775 aaagttgagctactcaagaagagaaaaaagaacgcggattctggcgcttcttccaagaag 1834
||| |||||||||| |||||||| |||||||| ||||||||| | |||||||||||||||
Sbjct: 301 aaaattgagctacttaagaagaggaaaaagaatgcggattctagtgcttcttccaagaag 360
Query: 1835 cggcactgatgtgtcacaaat--cttcatcgcattggtgtgtcatctctagtagaaatgt 1892
||||||||||| ||| | | |||||| ||||||||||| |||||||||||| |||||
Sbjct: 361 cggcactgatg-ctcagagttcgcttcatagcattggtgtggcatctctagtag-aatgt 418
Query: 1893 taccatgatcagctctgcgtgccaatcccccatgatgggtgggttgccttttgata--tc 1950
| ||||||||| ||| |||||||| ||| | ||| || ||||| |||||||| ||
Sbjct: 419 tgccatgatca--tcttcgtgccaagtccctgttatgagt-ggttgtattttgatatctc 475
Query: 1951 tgctatgtatgcttaagatgagttcaagg-atatgtaacatgaaacttgaa-tagaaaag 2008
| ||||||||||| |||||||| | |||| ||||||| || |||||||||| | ||||||
Sbjct: 476 tcctatgtatgctgaagatgagcttaaggaatatgtaccaggaaacttgaattggaaaag 535
Query: 2009 ttttgatc 2016
||||||||
Sbjct: 536 ttttgatc 543
>gb|CD223582.1|CD223582 CCC1_29_E05.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_29_E05_A007 3', mRNA sequence
Length = 657
Score = 462 bits (233), Expect = e-128
Identities = 457/522 (87%), Gaps = 11/522 (2%)
Strand = Plus / Plus
Query: 1501 cgaagctgctgaaaagaagaggaagctggagatgctagagaagcaatacatcgatgaact 1560
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1 cgaagctgctgaaaagaagaggaagttggagatgctagagaagcaataccatgatgaact 60
Query: 1561 gaagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagcagataaatc 1620
||||| ||||||||| || ||||||||||||||| ||||||| ||||||||| |||||||
Sbjct: 61 gaagatggaaattgacggtgttgctttctctagtctgtcaaataaggaagcaaataaatc 120
Query: 1621 accgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaacaagagga 1680
||| |||| |||||||||||||||||||||| |||| |||||||| ||||||||||||
Sbjct: 121 accagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaacaagagga 180
Query: 1681 ggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggcctttataa 1740
| | ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 181 gaaggatgatgatgacattggtactgccctcatgtctcgcaagcagcaaggcctttataa 240
Query: 1741 ggctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactcaagaagagaaa 1800
||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||
Sbjct: 241 agctatgaagatgggcaaagaaaagaaaaaagagaaaattgagctacttaagaagaggaa 300
Query: 1801 aaagaacgcggattctggcgcttcttccaagaagcggcactgatgtgtcacaaat--ctt 1858
|||||| ||||||||| | |||||||||||||||||||||||||| ||| | | |||
Sbjct: 301 aaagaatgcggattctagtgcttcttccaagaagcggcactgatg-ctcagagttcgctt 359
Query: 1859 catcgcattggtgtgtcatctctagtagaaatgttaccatgatcagctctgcgtgccaat 1918
||| ||||||||||| |||||||||||| |||||| ||||||||| ||| ||||||||
Sbjct: 360 catagcattggtgtggcatctctagtag-aatgttgccatgatca--tcttcgtgccaag 416
Query: 1919 cccccatgatgggtgggttgccttttgata--tctgctatgtatgcttaagatgagttca 1976
||| | ||| || ||||| |||||||| ||| ||||||||||| |||||||| | |
Sbjct: 417 tccctgttatgagt-ggttgtattttgatatctctcctatgtatgctgaagatgagctta 475
Query: 1977 agg-atatgtaacatgaaacttgaa-tagaaaagttttgatc 2016
||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 476 aggaatatgtaccaggaaacttgaattggaaaagttttgatc 517
>gb|CN124291.1|CN124291 RHOH1_3_G08.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_3_G08_A002 5', mRNA sequence
Length = 559
Score = 462 bits (233), Expect = e-128
Identities = 291/309 (94%), Gaps = 1/309 (0%)
Strand = Plus / Plus
Query: 1295 gaaggttatcttgttggaagagtacctccaccacatttgtctccttttgtggacaatgat 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaaggttatcttgttggaagagtacctccaccacatttgtctccttttgtggacaatgat 310
Query: 1355 gccgagggctacatgcctgagtatgcagagacaataaagaggctccaagctgctgctcgc 1414
|| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 311 gcagagggctacattcctgagtatgcagaaacaataaagaggctgcaagctgctgctcgc 370
Query: 1415 aatgaggtgttgcctcttccaggtatt-ggtgatgaagatctagacaattcactggtagc 1473
|||||||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||
Sbjct: 371 aatgaggtcttgcctcttcctggtattnggtgatgaagatctagacaattcattggtagc 430
Query: 1474 agcaatgatggatcgaacagcttctaacgaagctgctgaaaagaagaggaagctggagat 1533
|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 431 agcaatgatggatcgaacagaatctaacgaagctgctgaaaagaagaggaagttggagat 490
Query: 1534 gctagagaagcaatacatcgatgaactgaagaaggaaattgatggcgttgctttctctag 1593
|||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||||
Sbjct: 491 gctagagaagcaataccatgatgaactgaagatggaaattgacggtgttgctttctctag 550
Query: 1594 tttgtcaaa 1602
| |||||||
Sbjct: 551 tctgtcaaa 559
Score = 315 bits (159), Expect = 9e-084
Identities = 174/179 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 77 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 136
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 137 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 196
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagg 179
||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 197 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagg 255
>gb|CD224948.1|CD224948 CCC1_37_B06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_37_B06_A007 3', mRNA sequence
Length = 656
Score = 446 bits (225), Expect = e-123
Identities = 455/522 (87%), Gaps = 11/522 (2%)
Strand = Plus / Plus
Query: 1501 cgaagctgctgaaaagaagaggaagctggagatgctagagaagcaatacatcgatgaact 1560
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1 cgaagctgctgaaaagaagaggaagttggagatgctagagaagcaataccatgatgaact 60
Query: 1561 gaagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagcagataaatc 1620
||||| ||||||| || ||||||||||||||| ||||||| ||||||||| |||||||
Sbjct: 61 gaagatggaaattctcggtgttgctttctctagtctgtcaaataaggaagcaaataaatc 120
Query: 1621 accgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaacaagagga 1680
||| |||| |||||||||||||||||||||| |||| |||||||| ||||||||||||
Sbjct: 121 accagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaacaagagga 180
Query: 1681 ggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggcctttataa 1740
| | ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 181 gaaggatgatgatgacattggtactgccctcatgtctcgcaagcagcaaggcctttataa 240
Query: 1741 ggctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactcaagaagagaaa 1800
||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||
Sbjct: 241 agctatgaagatgggcaaagaaaagaaaaaagagaaaattgagctacttaagaagaggaa 300
Query: 1801 aaagaacgcggattctggcgcttcttccaagaagcggcactgatgtgtcacaaat--ctt 1858
|||||| ||||||||| | |||||||||||||||||||||||||| ||| | | |||
Sbjct: 301 aaagaatgcggattctagtgcttcttccaagaagcggcactgatg-ctcagagttcgctt 359
Query: 1859 catcgcattggtgtgtcatctctagtagaaatgttaccatgatcagctctgcgtgccaat 1918
||| ||||||||||| |||||||||||| |||||| ||||||||| ||| ||||||||
Sbjct: 360 catagcattggtgtggcatctctagtag-aatgttgccatgatca--tcttcgtgccaag 416
Query: 1919 cccccatgatgggtgggttgccttttgata--tctgctatgtatgcttaagatgagttca 1976
||| | ||| || ||||| |||||||| ||| ||||||||||| |||||||| | |
Sbjct: 417 tccctgttatgagt-ggttgtattttgatatctctcctatgtatgctgaagatgagctta 475
Query: 1977 agg-atatgtaacatgaaacttgaa-tagaaaagttttgatc 2016
||| ||||||| || |||||||||| | ||||||||||||||
Sbjct: 476 aggaatatgtaccaggaaacttgaattggaaaagttttgatc 517
>gb|BI246134.1|BI246134 IP1_67_C11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 291
Score = 410 bits (207), Expect = e-112
Identities = 228/235 (97%)
Strand = Plus / Plus
Query: 1 ccctgcgggtaagaagaaggaagggaatgcggcaaagtacatcacgaggaccaaggcggt 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ccctgcgggtaagaagaaggaggggaatgcggcaaagtacatcacgaggaccaaggcggt 116
Query: 61 caactacctgcaagttagcctcgcaatctttaggaagctatgcattctaaagggtgtctt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 117 caactacctgcaagttagcctcgcaatcttcaggaagctatgcattctaaagggtgtctt 176
Query: 121 tccacgtcagccaaagaagaaggtggaagggaaccacaagacctactaccacacaaagga 180
||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 177 tccgcggcagccaaagaagaaggtggaagggaaccacaagacctactaccacacgaagga 236
Query: 181 tattgcattcctcgctcatgaccctttgatcgagaagttcagggagattaaggtc 235
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 237 tattgcattccttgctcatgaccctttgatcgaaaagttcagggagattaaggtc 291
>gb|BM322739.1|BM322739 PIC1_9_E06.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 238
Score = 400 bits (202), Expect = e-109
Identities = 223/230 (96%)
Strand = Plus / Plus
Query: 236 catcgaaggaaggttaaaaaggctgttgctaagaaaaacagggatcttgcagacaggctg 295
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9 catcgaaggaaggttaaaaaggctgttgctaagaaaaacagggatctcgcagacaggctg 68
Query: 296 ttgaatcggccaccaacttacaagcttgataggcttgtccttgaaaggtatccaacattc 355
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 69 ttgaatcggccaccaacttacaaacttgataggcttgtccttgaaaggtatccaacattt 128
Query: 356 gttgatgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcatta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gttgatgctcttcgtgacttggatgactgccttacaatggtgcatctgtttgcggcatta 188
Query: 416 cctgctgttgacggtgaacgtgttgaggtcaaacgaatccataactgccg 465
||||||||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 189 cctgctgttgatggtgaacgcgttgaagtcaaacgaattcataactgccg 238
>gb|BF587034.1|BF587034 FM1_32_E01.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 500
Score = 359 bits (181), Expect = 7e-097
Identities = 258/284 (90%)
Strand = Plus / Plus
Query: 1562 aagaaggaaattgatggcgttgctttctctagtttgtcaaacaaggaagcagataaatca 1621
|||| ||||||||| || ||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1 aagatggaaattgacggtgttgctttctctagtctgtcaaataaggaagcagataaatca 60
Query: 1622 ccgaatgcaaaagatgatactcagtcagatcgtgaggaggatgccagtaaacaagaggag 1681
|| |||| |||||||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct: 61 ccagatgccaaagatgatactcagtcagatcacgaggcggatgccattaaacaagaggag 120
Query: 1682 gatgatgatgatgatattggtactgctctcatgtctcgcaagcagagaggcctttataag 1741
| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 121 aaggatgatgatgacattggtactgctttcatgtctcgcaagcagcaaggcctttataaa 180
Query: 1742 gctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactcaagaagagaaaa 1801
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 181 gctatgaagatgggcaaagaaaagaaaaaggagaaaattgagctacttaagaagaggaaa 240
Query: 1802 aagaacgcggattctggcgcttcttccaagaagcggcactgatg 1845
||||| ||||||||| | ||||||||||| ||||||||||||||
Sbjct: 241 aagaatgcggattctagtgcttcttccaanaagcggcactgatg 284
Score = 129 bits (65), Expect = 1e-027
Identities = 146/167 (87%), Gaps = 7/167 (4%)
Strand = Plus / Plus
Query: 1852 aaatcttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagc---tct 1908
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||
Sbjct: 308 aaatcttcatcgcattggtgtggcatctctagtag-aatgttgccatgatcagctcatct 366
Query: 1909 gcgtgccaatcccccatgatgggtgggttgccttttgatatctgctatgtatgcttaaga 1968
|||||||| |||| ||||| || ||||| ||||||||||| ||||||||||| ||||
Sbjct: 367 tcgtgccaagtccccgtgatgagt-ggttgtattttgatatctcctatgtatgctgaaga 425
Query: 1969 tgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttg 2013
|||| |||||| ||||||| || |||||||||| |||||||||||||
Sbjct: 426 tgagctcaaggaatatgtatcaggaaacttgaattagaaaagttttg 472
>gb|BI245576.1|BI245576 IP1_67_C11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 493
Score = 307 bits (155), Expect = 2e-081
Identities = 268/302 (88%), Gaps = 4/302 (1%)
Strand = Plus / Plus
Query: 1604 aaggaagcagataaatcaccgaatgcaaaagatgatactcagtcagatcgtgaggaggat 1663
||||||||| |||||||||| |||| |||||||||||||||||||||| |||| ||||
Sbjct: 5 aaggaagcaaataaatcaccagatgccaaagatgatactcagtcagatcacgaggcggat 64
Query: 1664 gccagtaaacaagaggaggatgatgatgatgatattggtactgctctcatgtctcgcaag 1723
|||| ||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 65 gccattaaacaagaggagaaggatgatgatgacattggtactgctatcatgtctcgcaag 124
Query: 1724 cagagaggcctttataaggctatgaagatgggcaaagaaaagaaaaaggagaaagttgag 1783
||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 125 cagcaaggcctttataaagctatgaagatgggcaaagaaaagaaaaaagagaaaattgag 184
Query: 1784 ctactcaagaagagaaaaaagaacgcggattctggcgcttcttccaagaagcggcactga 1843
|| || |||||||| |||||||| ||||||||| | ||||||||||||||||||||||||
Sbjct: 185 ctccttaagaagaggaaaaagaatgcggattctagtgcttcttccaagaagcggcactga 244
Query: 1844 tgtgtcacaaat--cttcatcgcattggtgtgtcatctctagtagaaatgttaccatgat 1901
|| ||| | | |||||| ||||||||||| |||||||||||| |||||| |||||||
Sbjct: 245 tg-ctcagagttcgcttcatagcattggtgtggcatctctagtag-aatgttgccatgat 302
Query: 1902 ca 1903
||
Sbjct: 303 ca 304
>gb|BF481346.1|BF481346 FM1_18_H04.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 442
Score = 244 bits (123), Expect = 3e-062
Identities = 162/175 (92%)
Strand = Plus / Plus
Query: 1671 aacaagaggaggatgatgatgatgatattggtactgctctcatgtctcgcaagcagagag 1730
||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 8 aacaagaggagaaggatgatgatgacattggtactgctctcatgtctcgcaagcagcaag 67
Query: 1731 gcctttataaggctatgaagatgggcaaagaaaagaaaaaggagaaagttgagctactca 1790
|||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 68 gcctttataaagctatgaagatgggcaaagaaaagaaaaaggagaaaattgagttactta 127
Query: 1791 agaagagaaaaaagaacgcggattctggcgcttcttccaagaagcggcactgatg 1845
||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||
Sbjct: 128 agaagaggaaaaagaatgcggattctagtgcttcttccaagaagcggcactgatg 182
Score = 129 bits (65), Expect = 1e-027
Identities = 146/167 (87%), Gaps = 7/167 (4%)
Strand = Plus / Plus
Query: 1852 aaatcttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagc---tct 1908
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||
Sbjct: 206 aaatcttcatcgcattggtgtggcatctctagtag-aatgttgccatgatcagctcatct 264
Query: 1909 gcgtgccaatcccccatgatgggtgggttgccttttgatatctgctatgtatgcttaaga 1968
|||||||| |||| ||||| || ||||| ||||||||||| ||||||||||| ||||
Sbjct: 265 tcgtgccaagtccccgtgatgagt-ggttgtattttgatatctcctatgtatgctgaaga 323
Query: 1969 tgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttg 2013
|||| |||||| ||||||| || |||||||||| |||||||||||||
Sbjct: 324 tgagctcaaggaatatgtatcaggaaacttgaattagaaaagttttg 370
>gb|CW070735.1|CW070735 104_322_10590960_116_30543 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10590960, DNA
sequence
Length = 733
Score = 161 bits (81), Expect = 3e-037
Identities = 233/274 (85%), Gaps = 11/274 (4%)
Strand = Plus / Plus
Query: 1749 agatgggcaaagaaaagaaaaaggagaaagttgagctactcaagaagagaaaaaagaacg 1808
|||||||||||||||||||||| |||||| |||||||||| |||||||| |||||||| |
Sbjct: 19 agatgggcaaagaaaagaaaaaagagaaaattgagctacttaagaagaggaaaaagaatg 78
Query: 1809 cggattctggcgcttcttccaagaagcggcactgatgtgtcacaaat--cttcatcgcat 1866
|||||||| | |||||||||||||||||||||||||| ||| | | |||||| ||||
Sbjct: 79 cggattctagtgcttcttccaagaagcggcactgatg-ctcagagttcgcttcatagcat 137
Query: 1867 tggtgtgtcatctctagtagaaatgttaccatgatcagctctgcgtgccaatcccccatg 1926
||||||| |||||||||||| |||||| ||||||||| ||| |||||||| ||| |
Sbjct: 138 tggtgtggcatctctagtag-aatgttgccatgatca--tcttcgtgccaagtccctgtt 194
Query: 1927 atgggtgggttgccttttgata--tctgctatgtatgcttaagatgagttcaagg-atat 1983
||| || ||||| |||||||| ||| ||||||||||| |||||||| | |||| ||||
Sbjct: 195 atgagt-ggttgtattttgatatctctcctatgtatgctgaagatgagcttaaggaatat 253
Query: 1984 gtaacatgaaacttgaa-tagaaaagttttgatc 2016
||| || |||||||||| | ||||||||||||||
Sbjct: 254 gtaccaggaaacttgaattggaaaagttttgatc 287
>gb|BF481417.1|BF481417 FM1_18_H04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 331
Score = 129 bits (65), Expect = 1e-027
Identities = 146/167 (87%), Gaps = 7/167 (4%)
Strand = Plus / Minus
Query: 1852 aaatcttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagc---tct 1908
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||
Sbjct: 331 aaatcttcatcgcattggtgtggcatctctagtag-aatgttgccatgatcagctcatct 273
Query: 1909 gcgtgccaatcccccatgatgggtgggttgccttttgatatctgctatgtatgcttaaga 1968
|||||||| |||| ||||| || ||||| ||||||||||| ||||||||||| ||||
Sbjct: 272 tcgtgccaagtccccgtgatgagt-ggttgtattttgatatctcctatgtatgctgaaga 214
Query: 1969 tgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttg 2013
|||| |||||| ||||||| || |||||||||| |||||||||||||
Sbjct: 213 tgagctcaaggaatatgtatcaggaaacttgaattagaaaagttttg 167
>gb|BF481418.1|BF481418 FM1_18_H05.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 383
Score = 129 bits (65), Expect = 1e-027
Identities = 146/167 (87%), Gaps = 7/167 (4%)
Strand = Plus / Minus
Query: 1852 aaatcttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagc---tct 1908
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||
Sbjct: 331 aaatcttcatcgcattggtgtggcatctctagtag-aatgttgccatgatcagctcatct 273
Query: 1909 gcgtgccaatcccccatgatgggtgggttgccttttgatatctgctatgtatgcttaaga 1968
|||||||| |||| ||||| || ||||| ||||||||||| ||||||||||| ||||
Sbjct: 272 tcgtgccaagtccccgtgatgagt-ggttgtattttgatatctcctatgtatgctgaaga 214
Query: 1969 tgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttg 2013
|||| |||||| ||||||| || |||||||||| |||||||||||||
Sbjct: 213 tgagctcaaggaatatgtatcaggaaacttgaattagaaaagttttg 167
Score = 52.0 bits (26), Expect = 2e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1820 gcttcttccaagaagcggcactgatg 1845
||||||||||||||||||||||||||
Sbjct: 380 gcttcttccaagaagcggcactgatg 355
>gb|BF481347.1|BF481347 FM1_18_H05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 342
Score = 99.6 bits (50), Expect = 1e-018
Identities = 145/168 (86%), Gaps = 9/168 (5%)
Strand = Plus / Plus
Query: 1852 aaatcttcatcgcattggtgtgtcatctctagtagaaatgttaccatgatcagc---tct 1908
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||
Sbjct: 94 aaatcttcatcgcattggtgtggcatctctagtag-aatgttgccatgatcagctcatct 152
Query: 1909 gcgtgccaatcccccatgatgggtgggttgccttttgatatctgctatgtatgct-taag 1967
|||||||| |||| ||||| || ||||| ||||||||||| ||||||||||| |||
Sbjct: 153 tcgtgccaagtccccgtgatgagt-ggttgtattttgatatctcctatgtatgctgcaag 211
Query: 1968 atgagttcaagg-atatgtaacatgaaacttgaa-tagaaaagttttg 2013
||||| |||||| ||||| | || |||||||||| |||||||||||||
Sbjct: 212 atgagctcaaggaatatg-atcaggaaacttgaattagaaaagttttg 258
Score = 93.7 bits (47), Expect = 6e-017
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1779 ttgagctactcaagaagagaaaaaagaacgcggattctggcgcttcttccaagaagcggc 1838
|||||||||| |||||||| |||||||| ||||||||| | |||||||||||||||||||
Sbjct: 4 ttgagctacttaagaagaggaaaaagaatgcggattctagtgcttcttccaagaagcggc 63
Query: 1839 actgatg 1845
|||||||
Sbjct: 64 actgatg 70
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 653,427
Number of Sequences: 832831
Number of extensions: 653427
Number of successful extensions: 194689
Number of sequences better than 0.5: 45
Number of HSP's better than 0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 194494
Number of HSP's gapped (non-prelim): 133
length of query: 2118
length of database: 491,359,669
effective HSP length: 20
effective length of query: 2098
effective length of database: 474,703,049
effective search space: 995926996802
effective search space used: 995926996802
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)