BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4548790.2.1
(1044 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 862 0.0
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 854 0.0
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 652 0.0
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 500 e-139
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 486 e-135
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 484 e-135
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 450 e-124
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 357 1e-096
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 333 2e-089
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 321 7e-086
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 319 3e-085
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 313 2e-083
gb|BG356043.2|BG356043 EM1_19_F04.g1_A002 Embryo 1 (EM1) So... 285 4e-075
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 264 1e-068
gb|BG356953.1|BG356953 OV2_12_A12.g1_A002 Ovary 2 (OV2) Sor... 226 3e-057
gb|BG054373.1|BG054373 OV2_3_F03.b1_A002 Ovary 2 (OV2) Sorg... 212 5e-053
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 204 1e-050
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 190 2e-046
gb|BG947272.1|BG947272 IP1_3_E11.b1_A002 Immature pannicle ... 186 3e-045
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 182 4e-044
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 182 4e-044
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 182 4e-044
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 178 7e-043
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 176 3e-042
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 174 1e-041
gb|BG047968.1|BG047968 OV1_26_A06.g1_A002 Ovary 1 (OV1) Sor... 157 2e-036
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 155 1e-035
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 155 1e-035
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 155 1e-035
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 155 1e-035
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 153 4e-035
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 153 4e-035
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 153 4e-035
gb|BG557254.1|BG557254 EM1_44_E12.g1_A002 Embryo 1 (EM1) So... 153 4e-035
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 153 4e-035
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 153 4e-035
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 149 6e-034
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 149 6e-034
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 149 6e-034
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 149 6e-034
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 149 6e-034
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 145 9e-033
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 137 2e-030
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 137 2e-030
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 137 2e-030
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 137 2e-030
gb|BG713853.1|BG713853 EM1_20_F03.g2_A002 Embryo 1 (EM1) So... 137 2e-030
gb|BI351300.1|BI351300 IP1_69_H01.b1_A002 Immature pannicle... 129 6e-028
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 127 2e-027
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 127 2e-027
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 125 9e-027
gb|CW032533.1|CW032533 104_261_10501433_114_30363 Sorghum m... 121 1e-025
gb|BI099255.1|BI099255 IP1_40_E08.g1_A002 Immature pannicle... 121 1e-025
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 113 3e-023
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 113 3e-023
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 113 3e-023
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 113 3e-023
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 113 3e-023
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 113 3e-023
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 113 3e-023
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 111 1e-022
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 109 5e-022
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 109 5e-022
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 107 2e-021
gb|BG557821.1|BG557821 EM1_53_G02.b1_A002 Embryo 1 (EM1) So... 107 2e-021
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 105 8e-021
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 105 8e-021
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 103 3e-020
gb|CW231486.1|CW231486 104_680_11211147_148_37339_004 Sorgh... 103 3e-020
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 101 1e-019
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 94 3e-017
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 92 1e-016
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 92 1e-016
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 92 1e-016
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 92 1e-016
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 92 1e-016
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 92 1e-016
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 92 1e-016
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 92 1e-016
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 88 2e-015
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 86 8e-015
gb|BG357140.1|BG357140 OV2_10_D01.b1_A002 Ovary 2 (OV2) Sor... 86 8e-015
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 86 8e-015
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 86 8e-015
gb|CN132704.1|CN132704 OX1_7_E09.g1_A002 Oxidatively-stress... 86 8e-015
gb|CX623279.1|CX623279 GABR1_68_F03.g1_A002 GA- or brassino... 86 8e-015
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 84 3e-014
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 84 3e-014
gb|CW406236.1|CW406236 fsbb001f099c15k0 Sorghum methylation... 80 5e-013
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 78 2e-012
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 78 2e-012
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 78 2e-012
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 78 2e-012
gb|BG053558.1|BG053558 RHIZ2_10_G02.g1_A003 Rhizome2 (RHIZ2... 78 2e-012
gb|CW408700.1|CW408700 fsbb001f102l07f0 Sorghum methylation... 76 7e-012
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 76 7e-012
gb|CW059831.1|CW059831 104_303_10519536_1_30042 Sorghum met... 74 3e-011
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 74 3e-011
gb|BE355544.1|BE355544 DG1_115_F11.b1_A002 Dark Grown 1 (DG... 72 1e-010
gb|CN135093.1|CN135093 OX1_30_C01.g1_A002 Oxidatively-stres... 72 1e-010
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 70 4e-010
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 70 4e-010
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 70 4e-010
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 70 4e-010
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 68 2e-009
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 68 2e-009
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 68 2e-009
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 68 2e-009
gb|BI075536.1|BI075536 IP1_21_G05.g1_A002 Immature pannicle... 68 2e-009
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 66 7e-009
gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorgh... 66 7e-009
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 66 7e-009
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 66 7e-009
gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) So... 66 7e-009
gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) So... 66 7e-009
gb|CD432755.1|CD432755 ETH1_33_A06.b1_A002 Ethylene-treated... 66 7e-009
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 64 3e-008
gb|CW406941.1|CW406941 fsbb001f100d03k0 Sorghum methylation... 64 3e-008
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 64 3e-008
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 64 3e-008
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 64 3e-008
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 62 1e-007
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 62 1e-007
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 62 1e-007
gb|CW083025.1|CW083025 104_425_10944087_116_32356_060 Sorgh... 62 1e-007
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 62 1e-007
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 62 1e-007
gb|CW146461.1|CW146461 104_539_11139005_116_34990_025 Sorgh... 60 4e-007
gb|CW146462.1|CW146462 104_539_11139005_148_34986_025 Sorgh... 60 4e-007
gb|BG357287.1|BG357287 OV2_12_A12.b1_A002 Ovary 2 (OV2) Sor... 60 4e-007
gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum m... 56 7e-006
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 56 7e-006
gb|CW171728.1|CW171728 104_582_11155897_116_36529_005 Sorgh... 56 7e-006
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 56 7e-006
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 56 7e-006
gb|CW416233.1|CW416233 fsbb001f116l03k0 Sorghum methylation... 56 7e-006
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 56 7e-006
gb|BE125768.1|BE125768 DG1_57_A08.b1_A002 Dark Grown 1 (DG1... 56 7e-006
gb|BE355609.1|BE355609 DG1_115_F11.g1_A002 Dark Grown 1 (DG... 56 7e-006
gb|BE361871.1|BE361871 DG1_82_G01.g1_A002 Dark Grown 1 (DG1... 56 7e-006
gb|BF421314.1|BF421314 FM1_7_B08.b1_A003 Floral-Induced Mer... 56 7e-006
gb|BG102062.1|BG102062 RHIZ2_24_D04.g1_A003 Rhizome2 (RHIZ2... 56 7e-006
gb|CD229951.1|CD229951 SS1_40_H09.b1_A012 Salt-stressed see... 56 7e-006
gb|CF429625.1|CF429625 PH1_23_G06.b1_A002 Phosphorous-defic... 56 7e-006
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 54 3e-005
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 54 3e-005
gb|CW059495.1|CW059495 104_302_10519350_115_30168 Sorghum m... 54 3e-005
gb|CW126000.1|CW126000 104_506_11112648_116_34721_088 Sorgh... 54 3e-005
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 54 3e-005
gb|CW133303.1|CW133303 104_517_11116687_148_34814_032 Sorgh... 54 3e-005
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 54 3e-005
gb|CW369378.1|CW369378 fsbb001f043m05f0 Sorghum methylation... 54 3e-005
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 54 3e-005
gb|BG557596.1|BG557596 EM1_53_G02.g1_A002 Embryo 1 (EM1) So... 54 3e-005
gb|CL185078.1|CL185078 104_398_10899280_116_32371_050 Sorgh... 52 1e-004
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 52 1e-004
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 52 1e-004
gb|CW131067.1|CW131067 104_513_11115467_116_34780_034 Sorgh... 52 1e-004
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 52 1e-004
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 52 1e-004
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 52 1e-004
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 52 1e-004
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 52 1e-004
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 52 1e-004
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 52 1e-004
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 52 1e-004
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 52 1e-004
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 52 1e-004
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 52 1e-004
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 52 1e-004
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 52 1e-004
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 52 1e-004
gb|CD462412.1|CD462412 ETH1_37_C09.g1_A002 Ethylene-treated... 52 1e-004
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 52 1e-004
gb|CW032534.1|CW032534 104_261_10501433_115_30364 Sorghum m... 50 4e-004
gb|CW140474.1|CW140474 104_531_11135799_148_34922_064 Sorgh... 50 4e-004
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 50 4e-004
gb|CW294637.1|CW294637 104_775_11415292_116_36233_006 Sorgh... 50 4e-004
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 50 4e-004
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 50 4e-004
gb|CF429937.1|CF429937 PH1_25_G07.b1_A002 Phosphorous-defic... 50 4e-004
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 50 4e-004
gb|CL182296.1|CL182296 104_393_10897331_148_31921_323 Sorgh... 48 0.002
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 48 0.002
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 48 0.002
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 48 0.002
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 48 0.002
gb|BG556478.1|BG556478 EM1_37_F06.g1_A002 Embryo 1 (EM1) So... 48 0.002
gb|CL159581.1|CL159581 104_349_10804357_116_31382_181 Sorgh... 46 0.007
gb|CL174576.1|CL174576 104_379_10891741_116_31769_109 Sorgh... 44 0.026
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 44 0.026
gb|CW085045.1|CW085045 104_428_10946160_114_32561_094 Sorgh... 44 0.026
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 44 0.026
gb|CW472915.1|CW472915 fsbb001f228b05f0 Sorghum methylation... 44 0.026
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 44 0.026
gb|BE596166.1|BE596166 PI1_50_D05.b1_A002 Pathogen induced ... 44 0.026
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 44 0.026
gb|BZ351065.1|BZ351065 hv18a09.g1 WGS-SbicolorF (JM107 adap... 42 0.10
gb|CL153042.1|CL153042 104_337_10780492_116_31368_124 Sorgh... 42 0.10
gb|CL174842.1|CL174842 104_379_10891942_116_31769_310 Sorgh... 42 0.10
gb|CL181627.1|CL181627 104_392_10896876_148_31925_252 Sorgh... 42 0.10
gb|CW061554.1|CW061554 104_305_10520462_114_30152 Sorghum m... 42 0.10
gb|CW071439.1|CW071439 104_323_10591520_114_30474 Sorghum m... 42 0.10
gb|CW214761.1|CW214761 104_646_11194182_148_37053_017 Sorgh... 42 0.10
gb|CW260111.1|CW260111 104_726_11228790_116_35191_019 Sorgh... 42 0.10
gb|CW320911.1|CW320911 104_814_11475263_148_35938_096 Sorgh... 42 0.10
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 42 0.10
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 42 0.10
gb|CW482454.1|CW482454 fsbb001f242i21k0 Sorghum methylation... 42 0.10
gb|BG050340.1|BG050340 FM1_53_G06.b1_A003 Floral-Induced Me... 42 0.10
gb|BG051053.1|BG051053 FM1_55_G05.b1_A003 Floral-Induced Me... 42 0.10
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 42 0.10
gb|BZ366787.1|BZ366787 ic99c10.b1 WGS-SbicolorF (JM107 adap... 40 0.40
gb|CW020674.1|CW020674 104_109_10409104_114_30490 Sorghum m... 40 0.40
gb|CW095886.1|CW095886 104_461_11001585_116_34334_043 Sorgh... 40 0.40
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 40 0.40
gb|CW317087.1|CW317087 104_808_11473229_148_35857_019 Sorgh... 40 0.40
gb|CW379039.1|CW379039 fsbb001f058b16k0 Sorghum methylation... 40 0.40
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 40 0.40
gb|BG048726.1|BG048726 OV1_22_C02.b1_A002 Ovary 1 (OV1) Sor... 40 0.40
gb|BG049020.1|BG049020 OV1_22_C02.g1_A002 Ovary 1 (OV1) Sor... 40 0.40
gb|BG054109.1|BG054109 OV2_3_F03.g1_A002 Ovary 2 (OV2) Sorg... 40 0.40
gb|BG947187.1|BG947187 IP1_3_E11.g1_A002 Immature pannicle ... 40 0.40
gb|BI245502.1|BI245502 IP1_66_C05.g1_A002 Immature pannicle... 40 0.40
gb|BI351096.1|BI351096 IP1_69_H01.g1_A002 Immature pannicle... 40 0.40
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 862 bits (435), Expect = 0.0
Identities = 569/611 (93%), Gaps = 2/611 (0%)
Strand = Plus / Plus
Query: 30 gcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcgggta 89
|||||||||||||||||||||||| ||||| | ||| |||||||| || ||||| ||
Sbjct: 9 gcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcggcta 68
Query: 90 cggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcgctgt 149
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcgctgt 127
Query: 150 tcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagcccgggt 209
|| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||||||
Sbjct: 128 tcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagcccgggt 187
Query: 210 gg-cggtggtgccggccagggaggccctccatcctggtcacggccaccaacttctgcccg 268
|| ||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 188 gggcggtggtgccgccccgggagcccctccatcctggtgacggccaccaacttctgcccg 247
Query: 269 cccaactacgcgctcccctccgacgacggcggctggtgcaacccgccccgcccgcacttc 328
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 248 ccaaactacgcgctcccctccgacgacggcggctggtgcaacccgccacgcccgcacttc 307
Query: 329 gacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtgcccgtc 388
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 308 gacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtccccgtc 367
Query: 389 tcctaccgccgggtgccgtgccgcaagtccggcggggtgcggttcacaatcaacggcttc 448
||||||||||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||
Sbjct: 368 tcctaccgccgggtgccatgccggaagtcaggcggcgtgcggttcaccatcaacggcttc 427
Query: 449 cggtacttcaacctggtgctgatcacgaacgtggccggcgcgggggacgtggtgcgcgcg 508
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 428 cggtacttcaacctggtgctgatcacgaacgtggccggcgcgggtgacatcgtgcgcgcg 487
Query: 509 agcgtcaaggcggccagcaccgggtggctgcccatgtccaggaactggggccagaactgg 568
||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 488 agcgtgaaggcgtccagcaccgggtggctgaccatgtcccggaactggggccagaactgg 547
Query: 569 cagtccaacgccatcctcgtcggccaggcgctctccttccgcgtcaccgccagcgaccgc 628
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 548 cagtccaacgccatcctcgtcggccaggcgctctccttccgcgtcaccggcagcgatcgc 607
Query: 629 cgcacctccac 639
|||||||||||
Sbjct: 608 cgcacctccac 618
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 854 bits (431), Expect = 0.0
Identities = 567/611 (92%), Gaps = 1/611 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 214 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 273
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 274 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgggcacggcg 332
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | || ||
Sbjct: 333 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccacccg 392
Query: 206 gggtggcggtggtgccggccagggaggccctccatcctggtcacggccaccaacttctgc 265
||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 393 gggtggcggtggtgccgccccgggagcccctccatcctggtgacggccaccaacttctgc 452
Query: 266 ccgcccaactacgcgctcccctccgacgacggcggctggtgcaacccgccccgcccgcac 325
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 453 ccgccaaactacgcgctcccctccgacgacggcggctggtgcaacccgccacgcccgcac 512
Query: 326 ttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtgccc 385
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 513 ttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtcccc 572
Query: 386 gtctcctaccgccgggtgccgtgccgcaagtccggcggggtgcggttcacaatcaacggc 445
|||||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||||
Sbjct: 573 gtctcctaccgccgggtgccatgccggaagtcaggcggcgtgcggttcaccatcaacggc 632
Query: 446 ttccggtacttcaacctggtgctgatcacgaacgtggccggcgcgggggacgtggtgcgc 505
||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 633 ttccggtacttcaacctggtgctgatcacgaacgtggccggcgcgggtgacatcgtgcgc 692
Query: 506 gcgagcgtcaaggcggccagcaccgggtggctgcccatgtccaggaactggggccagaac 565
|||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 693 gcgagcgtgaaggcgtccagcaccgggtggctgaccatgtcccggaactggggccagaac 752
Query: 566 tggcagtccaacgccatcctcgtcggccaggcgctctccttccgcgtcaccgccagcgac 625
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 753 tggcagtccaacgccatcctcgtcggccaggcgctctccttccgcgtcaccggcagcgat 812
Query: 626 cgccgcacctc 636
|||||||||||
Sbjct: 813 cgccgcacctc 823
>gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 5', mRNA sequence
Length = 665
Score = 652 bits (329), Expect = 0.0
Identities = 429/461 (93%), Gaps = 1/461 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 206 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 265
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 324
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 325 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 384
Query: 206 gggtggcggtggtgccggccagggaggccctccatcctggtcacggccaccaacttctgc 265
||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 385 gggtggcggtggtgccgccccgggagcccctccatcctggtgacggccaccaacttctgc 444
Query: 266 ccgcccaactacgcgctcccctccgacgacggcggctggtgcaacccgccccgcccgcac 325
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 ccgccaaactacgcgctcccctccgacgacggcggctggtgcaacccgccacgcccgcac 504
Query: 326 ttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtgccc 385
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 ttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtcccc 564
Query: 386 gtctcctaccgccgggtgccgtgccgcaagtccggcggggtgcggttcacaatcaacggc 445
|||||||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||||
Sbjct: 565 gtctcctaccgccgggtgccatgccggaagtcaggcggcgtgcggttcaccatcaacggc 624
Query: 446 ttccggtacttcaacctggtgctgatcacgaacgtggccgg 486
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttccggtacttcaacctggtgctgatcacgaacgtggccgg 665
>gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 548
Score = 500 bits (252), Expect = e-139
Identities = 337/364 (92%), Gaps = 1/364 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 186 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 245
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 304
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 305 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 364
Query: 206 gggtggcggtggtgccggccagggaggccctccatcctggtcacggccaccaacttctgc 265
||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 365 gggtggcggtggtgccgccccgggagcccctccatcctggtgacggccaccaacttctgc 424
Query: 266 ccgcccaactacgcgctcccctccgacgacggcggctggtgcaacccgccccgcccgcac 325
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 425 ccgccaaactacgcgctcccctccgacgacggcggctggtgcaacccgccacgcccgcac 484
Query: 326 ttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtgccc 385
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 485 ttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccggcatcgtcccc 544
Query: 386 gtct 389
||||
Sbjct: 545 gtct 548
>gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211147, DNA
sequence
Length = 736
Score = 486 bits (245), Expect = e-135
Identities = 296/313 (94%)
Strand = Plus / Plus
Query: 399 gggtgccgtgccgcaagtccggcggggtgcggttcacaatcaacggcttccggtacttca 458
||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 102 gggtgccatgccggaagtcaggcggcgtgcggttcaccatcaacggcttccggtacttca 161
Query: 459 acctggtgctgatcacgaacgtggccggcgcgggggacgtggtgcgcgcgagcgtcaagg 518
|||||||||||||||||||||||||||||||||| ||| | |||||||||||||| ||||
Sbjct: 162 acctggtgctgatcacgaacgtggccggcgcgggtgacatcgtgcgcgcgagcgtgaagg 221
Query: 519 cggccagcaccgggtggctgcccatgtccaggaactggggccagaactggcagtccaacg 578
|| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 222 cgtccagcaccgggtggctgaccatgtcccggaactggggccagaactggcagtccaacg 281
Query: 579 ccatcctcgtcggccaggcgctctccttccgcgtcaccgccagcgaccgccgcacctcca 638
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 282 ccatcctcgtcggccaggcgctctccttccgcgtcaccggcagcgatcgccgcacctcca 341
Query: 639 cctcctggaacgccgccccgagcacctggcagttcggccagaccttcgagggcaagaact 698
| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 342 catcctggaacgccgccccgcgcaactggcagttcggccagaccttcgagggcaagaact 401
Query: 699 tcagggtctgatg 711
|||||||||||||
Sbjct: 402 tcagggtctgatg 414
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 595 ctctgaaaaaaaggagtttttgcttctgaaca 626
>gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500149, DNA
sequence
Length = 688
Score = 484 bits (244), Expect = e-135
Identities = 308/328 (93%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 73 ggcggggcctgcgggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggc 132
||||| || ||||| || |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 68 ggcggcgcgtgcggctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggc 126
Query: 133 gctgagcacggcgctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtg 192
||||||||||||||||||| ||||||| || |||||||||||||||||||| ||| |||
Sbjct: 127 gctgagcacggcgctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtg 186
Query: 193 cgaggagcagcccgggtggcggtggtgccggccagggaggccctccatcctggtcacggc 252
|||| | ||||||||||||||||||||||| || ||||| |||||||||||||| |||||
Sbjct: 187 cgagaaccagcccgggtggcggtggtgccgccccgggagcccctccatcctggtgacggc 246
Query: 253 caccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgcaaccc 312
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caccaacttctgcccgccaaactacgcgctcccctccgacgacggcggctggtgcaaccc 306
Query: 313 gccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgc 372
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gccacgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgc 366
Query: 373 cggcatcgtgcccgtctcctaccgccgg 400
||||||||| ||||||||||||||||||
Sbjct: 367 cggcatcgtccccgtctcctaccgccgg 394
>gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 618
Score = 450 bits (227), Expect = e-124
Identities = 263/275 (95%)
Strand = Plus / Plus
Query: 437 atcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggcgcgggggac 496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 58 atcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggcgcgggtgac 117
Query: 497 gtggtgcgcgcgagcgtcaaggcggccagcaccgggtggctgcccatgtccaggaactgg 556
| |||||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 118 atcgtgcgcgcgagcgtgaaggcgtccagcaccgggtggctgaccatgtcccggaactgg 177
Query: 557 ggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgcgtcacc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgcgtcacc 237
Query: 617 gccagcgaccgccgcacctccacctcctggaacgccgccccgagcacctggcagttcggc 676
| |||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||
Sbjct: 238 ggcagcgatcgccgcacctccacatcctggaacgccgccccgcgcaactggcagttcggc 297
Query: 677 cagaccttcgagggcaagaacttcagggtctgatg 711
|||||||||||||||||||||||||||||||||||
Sbjct: 298 cagaccttcgagggcaagaacttcagggtctgatg 332
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 513 ctctgaaaaaaaggagtttttgcttctgaaca 544
>gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 3', mRNA sequence
Length = 702
Score = 357 bits (180), Expect = 1e-096
Identities = 216/228 (94%)
Strand = Plus / Plus
Query: 484 cggcgcgggggacgtggtgcgcgcgagcgtcaaggcggccagcaccgggtggctgcccat 543
||||||||| ||| | |||||||||||||| |||||| ||||||||||||||||| ||||
Sbjct: 1 cggcgcgggtgacatcgtgcgcgcgagcgtgaaggcgtccagcaccgggtggctgaccat 60
Query: 544 gtccaggaactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctc 603
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcccggaactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctc 120
Query: 604 cttccgcgtcaccgccagcgaccgccgcacctccacctcctggaacgccgccccgagcac 663
|||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||
Sbjct: 121 cttccgcgtcaccggcagcgatcgccgcacctccacatcctggaacgccgccccgcgcaa 180
Query: 664 ctggcagttcggccagaccttcgagggcaagaacttcagggtctgatg 711
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggcagttcggccagaccttcgagggcaagaacttcagggtctgatg 228
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 409 ctctgaaaaaaaggagtttttgcttctgaaca 440
>gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 470
Score = 333 bits (168), Expect = 2e-089
Identities = 254/280 (90%), Gaps = 2/280 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 192 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 251
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 310
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 311 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 370
Query: 206 gggtggc-ggtggtgccggccagggaggccctccatcctggtcacggccaccaacttctg 264
||||||| |||||||||| || ||||| |||||||||||||| |||||||||||||||||
Sbjct: 371 gggtggcgggtggtgccgccccgggagcccctccatcctggtgacggccaccaacttctg 430
Query: 265 cccgcccaactacgcgctcccctccgacgacggcggctgg 304
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 431 cccgccaaactacgcgctcccctccgacgacggcggctgg 470
>gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 321 bits (162), Expect = 7e-086
Identities = 241/266 (90%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 199 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 258
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 317
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 318 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 377
Query: 206 gggtggcggtggtgccggccagggaggccctccatcctggtcacggccaccaacttctgc 265
||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 378 gggtggcggtggtgccgccccgggagcccctccatcctggtgacggccaccaacttctgc 437
Query: 266 ccgcccaactacgcgctcccctccga 291
||||| ||||||||||||||||||||
Sbjct: 438 ccgccaaactacgcgctcccctccga 463
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 319 bits (161), Expect = 3e-085
Identities = 344/405 (84%)
Strand = Plus / Plus
Query: 246 tcacggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggt 305
||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||
Sbjct: 456 tcacggccaccaacttctgcccgcccaactacgcgctgccctcggacgccggcgggtggt 515
Query: 306 gcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagt 365
|||||||||| |||| |||||||||||| ||||||| ||||||| |||||| || |
Sbjct: 516 gcaacccgccgcgccaccacttcgacctctccatgccggccttcctccgcatcgcagact 575
Query: 366 accgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcgggg 425
|||||||| |||||||||||||| | ||||| ||||| |||||||||||||||||||
Sbjct: 576 accgcgccagcatcgtgcccgtcacataccggagggtggcgtgccgcaagtccggcggca 635
Query: 426 tgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccg 485
| |||||| ||||||||||||| ||||||||||||||||| |||| ||||||| ||
Sbjct: 636 tccggttcggcgtcaacggcttccgctacttcaacctggtgctcatcagcaacgtgggcg 695
Query: 486 gcgcgggggacgtggtgcgcgcgagcgtcaaggcggccagcaccgggtggctgcccatgt 545
|||| || |||||||| ||||| ||||||||| | ||| | |||||||||| ||
Sbjct: 696 gcgccggcgacgtggtccgcgccgccgtcaaggcctcgcacacggagtggctgcccctgg 755
Query: 546 ccaggaactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctcct 605
| | |||||||| ||||||||||||| || | |||||||||| ||| |||||||||||
Sbjct: 756 cgcgcaactggggacagaactggcagtgcagctccatcctcgtgggcggggcgctctcct 815
Query: 606 tccgcgtcaccgccagcgaccgccgcacctccacctcctggaacg 650
||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 816 tccgcgtcaccaccagcgaccgccgcaccctcacctcctggaacg 860
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 70 atgggcggggcctgcgggtacggcaacct 98
|||||||| ||||| ||||||||||||||
Sbjct: 272 atgggcggtgcctgtgggtacggcaacct 300
Score = 40.1 bits (20), Expect = 0.40
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 166 ctgcggcgcgtgcttcgagatcaggtgc 193
||||||||| ||||||||||||| ||||
Sbjct: 367 ctgcggcgcctgcttcgagatcaagtgc 394
>gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 462
Score = 313 bits (158), Expect = 2e-083
Identities = 244/270 (90%), Gaps = 2/270 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 194 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 253
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 312
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 313 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 372
Query: 206 gggtggcgg-tggtgccggccagggaggccctccatcctggtcacggccaccaacttctg 264
||||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||||
Sbjct: 373 gggtggcggntggtgccgccccgggagcccctccatcctggtgacggccaccaacttctg 432
Query: 265 cccgcccaactacgcgctcccctccgacga 294
|||||| |||||||||||||||||||||||
Sbjct: 433 cccgccaaactacgcgctcccctccgacga 462
>gb|BG356043.2|BG356043 EM1_19_F04.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 596
Score = 285 bits (144), Expect = 4e-075
Identities = 162/168 (96%)
Strand = Plus / Plus
Query: 544 gtccaggaactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctc 603
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcccggaactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctc 60
Query: 604 cttccgcgtcaccgccagcgaccgccgcacctccacctcctggaacgccgccccgagcac 663
|||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||
Sbjct: 61 cttccgcgtcaccggcagcgatcgccgcacctccacatcctggaacgccgccccgcgcaa 120
Query: 664 ctggcagttcggccagaccttcgagggcaagaacttcagggtctgatg 711
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggcagttcggccagaccttcgagggcaagaacttcagggtctgatg 168
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 349 ctctgaaaaaaaggagtttttgcttctgaaca 380
>gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10592073, DNA
sequence
Length = 684
Score = 264 bits (133), Expect = 1e-068
Identities = 142/145 (97%)
Strand = Plus / Plus
Query: 256 caacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgcaacccgcc 315
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacttctgcccgccaaactacgcgctcccctccgacgacggcggctggtgcaacccgcc 60
Query: 316 ccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccgg 375
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtaccgcgccgg 120
Query: 376 catcgtgcccgtctcctaccgccgg 400
|||||| ||||||||||||||||||
Sbjct: 121 catcgtccccgtctcctaccgccgg 145
>gb|BG356953.1|BG356953 OV2_12_A12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 664
Score = 226 bits (114), Expect = 3e-057
Identities = 129/134 (96%)
Strand = Plus / Plus
Query: 578 gccatcctcgtcggccaggcgctctccttccgcgtcaccgccagcgaccgccgcacctcc 637
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 1 gccatcctcgtcggccaggcgctctccttccgcgtcaccggcagcgatcgccgcacctcc 60
Query: 638 acctcctggaacgccgccccgagcacctggcagttcggccagaccttcgagggcaagaac 697
|| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 acatcctggaacgccgccccgcgcaactggcagttcggccagaccttcgagggcaagaac 120
Query: 698 ttcagggtctgatg 711
||||||||||||||
Sbjct: 121 ttcagggtctgatg 134
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 315 ctctgaaaaaaaggagtttttgcttctgaaca 346
>gb|BG054373.1|BG054373 OV2_3_F03.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 235
Score = 212 bits (107), Expect = 5e-053
Identities = 187/211 (88%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 27 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 86
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 87 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctga-cacggcg 144
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 145 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 204
Query: 206 gggtggcggtggtgccggccagggaggccct 236
||||||||||||||||| || ||||| ||||
Sbjct: 205 gggtggcggtggtgccgccccgggagcccct 235
>gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 204 bits (103), Expect = 1e-050
Identities = 167/187 (89%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||||| ||||| | ||| |||||||| || ||||
Sbjct: 199 gcgcgcacgccacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcg 258
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gctatggcaacctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 317
Query: 146 ctgttcgacgaggggctccgctgcggcgcgtgcttcgagatcaggtgcgaggagcagccc 205
|||||| ||||||| || |||||||||||||||||||| ||| ||||||| | ||||||
Sbjct: 318 ctgttcaacgagggtctgagctgcggcgcgtgcttcgagctcaagtgcgagaaccagccc 377
Query: 206 gggtggc 212
|||||||
Sbjct: 378 gggtggc 384
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 190 bits (96), Expect = 2e-046
Identities = 213/252 (84%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 382 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 441
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 442 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 501
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggtg 427
||||||||||||||||||||| ||||| | ||||||||||| ||| |||||| |
Sbjct: 502 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatc 561
Query: 428 cggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggc 487
|||||||| ||||||||| | |||||||||||||||||| | || ||||||||||||
Sbjct: 562 cggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggccggc 621
Query: 488 gcgggggacgtg 499
|| |||||||||
Sbjct: 622 gccggggacgtg 633
Score = 113 bits (57), Expect = 3e-023
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 522 ccagcaccgggtggctgcccatgtccaggaactggggccagaactggcagtccaacgcca 581
||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 656 ccagcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgc 715
Query: 582 tcctcgtcggccaggcgctctccttccgcgtcaccgccagcgaccgccgcacc 634
|||||| ||||||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 716 tcctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcacc 768
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 173 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 232
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 233 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 291
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 292 ctgttcaacga 302
Score = 56.0 bits (28), Expect = 7e-006
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 664 ctggcagttcggccagaccttcgagggc 691
||||||||||||||||||||||||||||
Sbjct: 798 ctggcagttcggccagaccttcgagggc 825
>gb|BG947272.1|BG947272 IP1_3_E11.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 453
Score = 186 bits (94), Expect = 3e-045
Identities = 109/114 (95%)
Strand = Plus / Plus
Query: 598 gctctccttccgcgtcaccgccagcgaccgccgcacctccacctcctggaacgccgcccc 657
|||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||
Sbjct: 9 gctctccttccgcgtcaccggcagcgatcgccgcacctccacatcctggaacgccgcccc 68
Query: 658 gagcacctggcagttcggccagaccttcgagggcaagaacttcagggtctgatg 711
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcgcaactggcagttcggccagaccttcgagggcaagaacttcagggtctgatg 122
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 303 ctctgaaaaaaaggagtttttgcttctgaaca 334
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 182 bits (92), Expect = 4e-044
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 386 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 445
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 446 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 505
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggtg 427
||||||||||||||||||||| ||||| | ||||||||||| ||| |||||| |
Sbjct: 506 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatc 565
Query: 428 cggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggc 487
|||||||| ||||||||| | ||| |||||||||||||| | || ||||||||||||
Sbjct: 566 cggttcaccatcaacggccactcctacatcaacctggtgctggtgaccaacgtggccggc 625
Query: 488 gcgggggacgtg 499
|| |||||||||
Sbjct: 626 gccggggacgtg 637
Score = 77.8 bits (39), Expect = 2e-012
Identities = 109/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| | || |
Sbjct: 177 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgtgtgtg 236
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 237 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 295
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 296 ctgttcaacga 306
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 522 ccagcaccgggtggctgcccatgtccaggaac 553
||||||||||||||| |||||||||| |||||
Sbjct: 660 ccagcaccgggtggcagcccatgtcccggaac 691
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 182 bits (92), Expect = 4e-044
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 47 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 106
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||| ||| | || ||| |||||||| ||||| |||||
Sbjct: 107 aacccgccgcgcccgcacttggacatggcgcagccggccttcctccagatcgcgcagtac 166
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggtg 427
||||||||||||||||||||| ||||| | ||||||||||| ||| |||||| |
Sbjct: 167 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatc 226
Query: 428 cggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggc 487
|||||||| ||||||||| | |||||||||||||||||| | || ||||||||||||
Sbjct: 227 cggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggccggc 286
Query: 488 gcgggggacgtg 499
|| |||||||||
Sbjct: 287 gccggggacgtg 298
Score = 113 bits (57), Expect = 3e-023
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 522 ccagcaccgggtggctgcccatgtccaggaactggggccagaactggcagtccaacgcca 581
||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 321 ccagcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgc 380
Query: 582 tcctcgtcggccaggcgctctccttccgcgtcaccgccagcgaccgccgcacc 634
|||||| ||||||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 381 tcctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcacc 433
Score = 56.0 bits (28), Expect = 7e-006
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 664 ctggcagttcggccagaccttcgagggc 691
||||||||||||||||||||||||||||
Sbjct: 463 ctggcagttcggccagaccttcgagggc 490
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 182 bits (92), Expect = 4e-044
Identities = 212/252 (84%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 369 acggccaccaacttttgcccgcccaactacggcctccccagcgacgacggcggctggtgc 428
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 429 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 488
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggtg 427
||||||||||||||||||||| ||||| | ||||||||||| ||| |||||| |
Sbjct: 489 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatc 548
Query: 428 cggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggc 487
|||||||| ||||||||| | |||||||||||||||||| | || ||||||||||||
Sbjct: 549 cggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggccggc 608
Query: 488 gcgggggacgtg 499
|| |||||||||
Sbjct: 609 gccggggacgtg 620
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 160 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 219
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 220 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 278
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 279 ctgttcaacga 289
Score = 83.8 bits (42), Expect = 3e-014
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 522 ccagcaccgggtggctgcccatgtccaggaactggggccagaactggcag 571
||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 643 ccagcaccgggtggcagcccatgtcccggaactggggccagaactggcag 692
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 178 bits (90), Expect = 7e-043
Identities = 204/242 (84%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 391 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 450
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 451 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 510
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggtg 427
||||||||||||||||||||| ||||| | ||||||||||| ||| |||||| |
Sbjct: 511 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggatc 570
Query: 428 cggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggc 487
|||||||| ||||||||| | |||||||||||||||||| | || ||||||||||||
Sbjct: 571 cggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggccggc 630
Query: 488 gc 489
||
Sbjct: 631 gc 632
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 182 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 241
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 242 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 300
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 301 ctgttcaacga 311
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 176 bits (89), Expect = 3e-042
Identities = 213/253 (84%), Gaps = 1/253 (0%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgac-ggcggctggtg 306
||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||
Sbjct: 385 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacgggcggctggtg 444
Query: 307 caacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagta 366
||||||||| ||||||||||||||| | || ||| |||||||| ||||| ||||
Sbjct: 445 caacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagta 504
Query: 367 ccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggt 426
|||||||||||||||||||||| ||||| | ||||||||||| ||| |||||| |
Sbjct: 505 ccgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgcgtgaagaagggcgggat 564
Query: 427 gcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccgg 486
|||||||| ||||||||| | |||||||||||||||||| | || |||||||||||
Sbjct: 565 ccggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggccgg 624
Query: 487 cgcgggggacgtg 499
||| |||||||||
Sbjct: 625 cgccggggacgtg 637
Score = 113 bits (57), Expect = 3e-023
Identities = 99/113 (87%)
Strand = Plus / Plus
Query: 522 ccagcaccgggtggctgcccatgtccaggaactggggccagaactggcagtccaacgcca 581
||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 660 ccagcaccgggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgc 719
Query: 582 tcctcgtcggccaggcgctctccttccgcgtcaccgccagcgaccgccgcacc 634
|||||| ||||||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 720 tcctcgacggccagagcctctccttccaggtcaccgccagcgacggccgcacc 772
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 176 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 235
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 236 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 294
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 295 ctgttcaacga 305
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 174 bits (88), Expect = 1e-041
Identities = 211/252 (83%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 254 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 313
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || || |||||||| ||||| |||||
Sbjct: 314 aacccgccgcgcccgcacttcgacatggcgcaaccggccttcctccagatcgcgcagtac 373
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtccggcggggtg 427
||||||||||||||||||||| ||||| | ||||||| ||| ||| |||||| |
Sbjct: 374 cgcgccggcatcgtgcccgtcgcctacaggagggtgccatgcgtgaagaagggcgggatc 433
Query: 428 cggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaacgtggccggc 487
|||||||| ||||||||| | |||||||||||||||||| | || ||||||||||||
Sbjct: 434 cggttcaccatcaacggccactcctacttcaacctggtgctggtgaccaacgtggccggc 493
Query: 488 gcgggggacgtg 499
|| |||||||||
Sbjct: 494 gccggggacgtg 505
Score = 83.8 bits (42), Expect = 3e-014
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 522 ccagcaccgggtggctgcccatgtccaggaactggggccagaactggcag 571
||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 528 ccagcaccgggtggcagcccatgtcccggaactggggccagaactggcag 577
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgc 59
|||| ||||||||||||||||||||| |||||||
Sbjct: 150 gcgcccacgccacgttctacggcggcggcgacgc 183
>gb|BG047968.1|BG047968 OV1_26_A06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 617
Score = 157 bits (79), Expect = 2e-036
Identities = 94/99 (94%)
Strand = Plus / Plus
Query: 613 caccgccagcgaccgccgcacctccacctcctggaacgccgccccgagcacctggcagtt 672
||||| |||||| |||||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 1 caccggcagcgatcgccgcacctccacatcctggaacgccgccccgcgcaactggcagtt 60
Query: 673 cggccagaccttcgagggcaagaacttcagggtctgatg 711
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggccagaccttcgagggcaagaacttcagggtctgatg 99
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 280 ctctgaaaaaaaggagtttttgcttctgaaca 311
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 155 bits (78), Expect = 1e-035
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 369 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 428
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 429 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 488
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgc 409
||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 489 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgc 530
Score = 83.8 bits (42), Expect = 3e-014
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 31 cacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcgggtac 90
||||||||||||||||||||| ||||||| | ||| |||||||| || || ||||||
Sbjct: 165 cacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtgggtac 224
Query: 91 ggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcgctgtt 150
|| ||| ||| ||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 225 gggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcgctgtt 283
Query: 151 cgacga 156
| ||||
Sbjct: 284 caacga 289
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 155 bits (78), Expect = 1e-035
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 372 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 431
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 432 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 491
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgc 409
||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 492 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgc 533
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 163 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 222
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 223 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 281
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 282 ctgttcaacga 292
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 155 bits (78), Expect = 1e-035
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 383 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 442
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 443 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 502
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgc 409
||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 503 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgc 544
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 174 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 233
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 234 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 292
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 293 ctgttcaacga 303
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 155 bits (78), Expect = 1e-035
Identities = 141/162 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 371 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 430
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 431 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 490
Query: 368 cgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgc 409
||||||||||||||||||||| ||||| | |||||||||||
Sbjct: 491 cgcgccggcatcgtgcccgtcgcctacaggagggtgccgtgc 532
Score = 83.8 bits (42), Expect = 3e-014
Identities = 106/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 162 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 221
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 222 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 280
Query: 146 ctgttc 151
||||||
Sbjct: 281 ctgttc 286
>gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 634
Score = 153 bits (77), Expect = 4e-035
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 202 acggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctggtgc 261
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| || |||||||||||| | ||| |||| |||||||||||||| |||||
Sbjct: 262 aacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtac 321
Query: 368 cgcgccggcatcgtgcccgtc 388
|||||||||||||||||||||
Sbjct: 322 cgcgccggcatcgtgcccgtc 342
Score = 71.9 bits (36), Expect = 1e-010
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 73 ggcggggcctgcgggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggc 132
||||| || ||||||||||||||||||| ||||| ||||||||| ||||| |||||
Sbjct: 40 ggcggcgcgtgcgggtacggcaacctgt-acagcaccgggtacggcacgaacacggcggc 98
Query: 133 gctgagcacggcgctgttcgacga 156
||||||||||||||||||| ||||
Sbjct: 99 gctgagcacggcgctgttcaacga 122
>gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 447
Score = 153 bits (77), Expect = 4e-035
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 154 acggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctggtgc 213
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| || |||||||||||| | ||| |||| |||||||||||||| |||||
Sbjct: 214 aacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtac 273
Query: 368 cgcgccggcatcgtgcccgtc 388
|||||||||||||||||||||
Sbjct: 274 cgcgccggcatcgtgcccgtc 294
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 110 gggtacggcgtgaacaacgcggcgctgagcacggcgctgttcgacga 156
||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 28 gggtacggcacgaacacggcggcgctgagcacggcgctgttcaacga 74
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 153 bits (77), Expect = 4e-035
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 415 acggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctggtgc 474
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| || |||||||||||| | ||| |||| |||||||||||||| |||||
Sbjct: 475 aacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtac 534
Query: 368 cgcgccggcatcgtgcccgtc 388
|||||||||||||||||||||
Sbjct: 535 cgcgccggcatcgtgcccgtc 555
Score = 109 bits (55), Expect = 5e-022
Identities = 113/131 (86%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||| ||||||| | ||| |||||||| || ||||
Sbjct: 206 gcgcgcacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcg 265
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 266 ggtacggcaacctgt-acagcaccgggtacggcacgaacacggcggcgctgagcacggcg 324
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 325 ctgttcaacga 335
>gb|BG557254.1|BG557254 EM1_44_E12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 623
Score = 153 bits (77), Expect = 4e-035
Identities = 89/93 (95%)
Strand = Plus / Plus
Query: 619 cagcgaccgccgcacctccacctcctggaacgccgccccgagcacctggcagttcggcca 678
|||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||||
Sbjct: 3 cagcgatcgccgcacctccacatcctggaacgccgccccgcgcaactggcagttcggcca 62
Query: 679 gaccttcgagggcaagaacttcagggtctgatg 711
|||||||||||||||||||||||||||||||||
Sbjct: 63 gaccttcgagggcaagaacttcagggtctgatg 95
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 276 ctctgaaaaaaaggagtttttgcttctgaaca 307
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 153 bits (77), Expect = 4e-035
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 414 acggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctggtgc 473
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| || |||||||||||| | ||| |||| |||||||||||||| |||||
Sbjct: 474 aacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtac 533
Query: 368 cgcgccggcatcgtgcccgtc 388
|||||||||||||||||||||
Sbjct: 534 cgcgccggcatcgtgcccgtc 554
Score = 95.6 bits (48), Expect = 8e-018
Identities = 113/132 (85%), Gaps = 2/132 (1%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||| ||||||| | ||| |||||||| || ||||
Sbjct: 204 gcgcgcacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcg 263
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgag-cacggc 144
||||||||||||||| ||||| ||||||||| ||||| ||||||||||| ||||||
Sbjct: 264 ggtacggcaacctgt-acagcaccgggtacggcacgaacacggcggcgctgagncacggc 322
Query: 145 gctgttcgacga 156
||||||| ||||
Sbjct: 323 gctgttcaacga 334
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 153 bits (77), Expect = 4e-035
Identities = 125/141 (88%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 405 acggccaccaacttctgccctcccaactacggcctccccagcgacgacggcggctggtgc 464
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| || |||||||||||| | ||| |||| |||||||||||||| |||||
Sbjct: 465 aacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtac 524
Query: 368 cgcgccggcatcgtgcccgtc 388
|||||||||||||||||||||
Sbjct: 525 cgcgccggcatcgtgcccgtc 545
Score = 109 bits (55), Expect = 5e-022
Identities = 113/131 (86%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||| ||||||| | ||| |||||||| || ||||
Sbjct: 196 gcgcgcacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcg 255
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 256 ggtacggcaacctgt-acagcaccgggtacggcacgaacacggcggcgctgagcacggcg 314
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 315 ctgttcaacga 325
>gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499499, DNA
sequence
Length = 624
Score = 149 bits (75), Expect = 6e-034
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 453 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 394
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 393 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 334
Query: 368 cgcgccggcatcgtgcccgtctcctac 394
||||||||||||||||||||| |||||
Sbjct: 333 cgcgccggcatcgtgcccgtcgcctac 307
Score = 56.0 bits (28), Expect = 7e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 109 ggggtacggcgtgaacaacgcggcgctgagcacggcgctgttcgacga 156
|||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 580 ggggtacggcacgaacacggcggcgctgagcacggcgctgttcaacga 533
>gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 550
Score = 149 bits (75), Expect = 6e-034
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 257 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 316
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 317 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 376
Query: 368 cgcgccggcatcgtgcccgtctcctac 394
||||||||||||||||||||| |||||
Sbjct: 377 cgcgccggcatcgtgcccgtcgcctac 403
Score = 56.0 bits (28), Expect = 7e-006
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 109 ggggtacggcgtgaacaacgcggcgctgagcacggcgctgttcgacga 156
|||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 130 ggggtacggcacgaacacggcggcgctgagcacggcgctgttcaacga 177
>gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f019i03, DNA
sequence
Length = 641
Score = 149 bits (75), Expect = 6e-034
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 378 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 319
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 318 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 259
Query: 368 cgcgccggcatcgtgcccgtctcctac 394
||||||||||||||||||||| |||||
Sbjct: 258 cgcgccggcatcgtgcccgtcgcctac 232
Score = 56.0 bits (28), Expect = 7e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 109 ggggtacggcgtgaacaacgcggcgctgagcacggcgctgttcgacga 156
|||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 505 ggggtacggcacgaacacggcggcgctgagcacggcgctgttcaacga 458
>gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047d01, DNA
sequence
Length = 642
Score = 149 bits (75), Expect = 6e-034
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 182 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 123
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 122 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 63
Query: 368 cgcgccggcatcgtgcccgtctcctac 394
||||||||||||||||||||| |||||
Sbjct: 62 cgcgccggcatcgtgcccgtcgcctac 36
Score = 56.0 bits (28), Expect = 7e-006
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 109 ggggtacggcgtgaacaacgcggcgctgagcacggcgctgttcgacga 156
|||||||||| ||||| |||||||||||||||||||||||| ||||
Sbjct: 309 ggggtacggcacgaacacggcggcgctgagcacggcgctgttcaacga 262
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgc 59
|||| ||||||||||||||||||||| |||||||
Sbjct: 515 gcgcccacgccacgttctacggcggcggcgacgc 482
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 149 bits (75), Expect = 6e-034
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 376 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 435
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| ||||||||||||||| | || ||| |||||||| ||||| |||||
Sbjct: 436 aacccgccgcgcccgcacttcgacatggcgcagccggccttcctccagatcgcgcagtac 495
Query: 368 cgcgccggcatcgtgcccgtctcctac 394
||||||||||||||||||||| |||||
Sbjct: 496 cgcgccggcatcgtgcccgtcgcctac 522
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 167 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 226
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 227 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 285
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 286 ctgttcaacga 296
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 145 bits (73), Expect = 9e-033
Identities = 124/141 (87%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
|||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||
Sbjct: 415 acggccaccaacttctgccctcccaactacggcctccccagcgacaacggcggctggtgc 474
Query: 308 aacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgccgagtac 367
|||||||| || |||||||||||| | ||| |||| |||||||||||||| |||||
Sbjct: 475 aacccgccgcggccgcacttcgacatggccgagcccgccttcctccacatcgcgcagtac 534
Query: 368 cgcgccggcatcgtgcccgtc 388
|||||||||||||||||||||
Sbjct: 535 cgcgccggcatcgtgcccgtc 555
Score = 109 bits (55), Expect = 5e-022
Identities = 113/131 (86%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||||||||||||||||||||||||| ||||||| | ||| |||||||| || ||||
Sbjct: 206 gcgcgcacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgcg 265
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||
Sbjct: 266 ggtacggcaacctgt-acagcaccgggtacggcacgaacacggcggcgctgagcacggcg 324
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 325 ctgttcaacga 335
>gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899353, DNA
sequence
Length = 645
Score = 137 bits (69), Expect = 2e-030
Identities = 84/89 (94%)
Strand = Plus / Minus
Query: 243 tggtcacggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggct 302
|||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 211 tggtgacggccaccaacttctgccctcccaacaacgcgctcccctccgacgacggcggct 152
Query: 303 ggtgcaacccgccccgcccgcacttcgac 331
||||||||||||||||| | |||||||||
Sbjct: 151 ggtgcaacccgccccgcgcccacttcgac 123
Score = 79.8 bits (40), Expect = 5e-013
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 73 ggcggggcctgcgggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggc 132
|||||||| || |||||||||||||| | ||||||||||||||||| |||| |||||
Sbjct: 377 ggcggggcgtgtgggtacggcaacctct-acagccaggggtacggcaccaacacggcggc 319
Query: 133 gctgagcacggcgctgttcgacgaggggctccgctgcggcgcgtgcttcgag 184
||||||||||||||| ||| || || ||| |||||||||| |||||||||
Sbjct: 318 gctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgag 267
Score = 42.1 bits (21), Expect = 0.10
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 31 cacgccacgttctacggcggcagcgacgc 59
|||||||| |||||||||||| |||||||
Sbjct: 520 cacgccaccttctacggcggcggcgacgc 492
>gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079i10, DNA
sequence
Length = 564
Score = 137 bits (69), Expect = 2e-030
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 243 tggtcacggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggct 302
|||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 175 tggtgacggccaccaacttctgccctcccaacaacgcgctcccctccgacgacggcggct 234
Query: 303 ggtgcaacccgccccgcccgcacttcgac 331
||||||||||||||||| | |||||||||
Sbjct: 235 ggtgcaacccgccccgcgcccacttcgac 263
Score = 79.8 bits (40), Expect = 5e-013
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 73 ggcggggcctgcgggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggc 132
|||||||| || |||||||||||||| | ||||||||||||||||| |||| |||||
Sbjct: 9 ggcggggcgtgtgggtacggcaacctct-acagccaggggtacggcaccaacacggcggc 67
Query: 133 gctgagcacggcgctgttcgacgaggggctccgctgcggcgcgtgcttcgag 184
||||||||||||||| ||| || || ||| |||||||||| |||||||||
Sbjct: 68 gctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgag 119
Score = 52.0 bits (26), Expect = 1e-004
Identities = 56/64 (87%), Gaps = 4/64 (6%)
Strand = Plus / Plus
Query: 428 cggttcacaatcaacggc--ttccggtacttcaacctggtgctgatcacgaacgtggccg 485
|||||||||||||||||| |||| |||||||||||||||||| | || ||||||| ||
Sbjct: 503 cggttcacaatcaacggccattcc--tacttcaacctggtgctggtgaccaacgtgggcg 560
Query: 486 gcgc 489
||||
Sbjct: 561 gcgc 564
>gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f192l01, DNA
sequence
Length = 507
Score = 137 bits (69), Expect = 2e-030
Identities = 84/89 (94%)
Strand = Plus / Minus
Query: 243 tggtcacggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggct 302
|||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 188 tggtgacggccaccaacttctgccctcccaacaacgcgctcccctccgacgacggcggct 129
Query: 303 ggtgcaacccgccccgcccgcacttcgac 331
||||||||||||||||| | |||||||||
Sbjct: 128 ggtgcaacccgccccgcgcccacttcgac 100
Score = 79.8 bits (40), Expect = 5e-013
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 73 ggcggggcctgcgggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggc 132
|||||||| || |||||||||||||| | ||||||||||||||||| |||| |||||
Sbjct: 354 ggcggggcgtgtgggtacggcaacctct-acagccaggggtacggcaccaacacggcggc 296
Query: 133 gctgagcacggcgctgttcgacgaggggctccgctgcggcgcgtgcttcgag 184
||||||||||||||| ||| || || ||| |||||||||| |||||||||
Sbjct: 295 gctgagcacggcgctcttcaacagcggcctcagctgcggcgcctgcttcgag 244
>gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 137 bits (69), Expect = 2e-030
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 243 tggtcacggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggct 302
|||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 270 tggtgacggccaccaacttctgccctcccaacaacgcgctcccctccgacgacggcggct 329
Query: 303 ggtgcaacccgccccgcccgcacttcgac 331
||||||||||||||||| | |||||||||
Sbjct: 330 ggtgcaacccgccccgcgcccacttcgac 358
Score = 99.6 bits (50), Expect = 5e-019
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 31 cacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcgggtac 90
|||||||| |||||||||||| ||||||| | ||| ||||||||||| || ||||||
Sbjct: 62 cacgccaccttctacggcggcggcgacgcgtccggcaccatgggcggggcgtgtgggtac 121
Query: 91 ggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcgctgtt 150
|||||||| | ||||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct: 122 ggcaacctct-acagccaggggtacggcaccaacacggcggcgctgagcacggcgctctt 180
Query: 151 cgacgaggggctccgctgcggcgcgtgcttcgag 184
| || || ||| |||||||||| |||||||||
Sbjct: 181 caacagcggcctcagctgcggcgcctgcttcgag 214
>gb|BG713853.1|BG713853 EM1_20_F03.g2_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 137 bits (69), Expect = 2e-030
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 627 gccgcacctccacctcctggaacgccgccccgagcacctggcagttcggccagaccttcg 686
||||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||
Sbjct: 1 gccgcacctccacatcctggaacgccgccccgcgcaactggcagttcggccagcccttcg 60
Query: 687 agggcaagaacttcagggtctgatg 711
|||||||||||||||||||||||||
Sbjct: 61 agggcaagaacttcagggtctgatg 85
Score = 40.1 bits (20), Expect = 0.40
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 936 ctctgaaaaaatggagtcttttcttctgaaca 967
||||||||||| ||||| ||| ||||||||||
Sbjct: 266 ctctgaaaaaaaggagtttttgcttctgaaca 297
>gb|BI351300.1|BI351300 IP1_69_H01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 145
Score = 129 bits (65), Expect = 6e-028
Identities = 108/121 (89%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 36 cacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcgggtacggcaa 95
|||||||||||||||||| ||||| | ||| |||||||| || ||||| || |||||
Sbjct: 26 cacgttctacggcggcagtgacgcctcgggcaccatgggcggcgcgtgcggctatggcaa 85
Query: 96 cctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcgctgttcgacg 155
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 86 cctgt-acagccaggggtacggcgtgaacaacgcggcgctgagcacggcgctgttcaacg 144
Query: 156 a 156
|
Sbjct: 145 a 145
>gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_33_A06_A002 5', mRNA sequence
Length = 520
Score = 127 bits (64), Expect = 2e-027
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 390 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 449
Query: 308 aacccgccccgcccgcacttcgac 331
|||||||| |||||||||||||||
Sbjct: 450 aacccgccgcgcccgcacttcgac 473
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 181 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 240
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 241 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 299
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 300 ctgttcaacga 310
>gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_D09_A002 5', mRNA sequence
Length = 779
Score = 127 bits (64), Expect = 2e-027
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 248 acggccaccaacttctgcccgcccaactacgcgctcccctccgacgacggcggctggtgc 307
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 690 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 749
Query: 308 aacccgccccgcccgcacttcgac 331
|||||||| |||||||||||||||
Sbjct: 750 aacccgccgcgcccgcacttcgac 773
Score = 85.7 bits (43), Expect = 8e-015
Identities = 110/131 (83%), Gaps = 1/131 (0%)
Strand = Plus / Plus
Query: 26 gcgcgcacgccacgttctacggcggcagcgacgcttttggctttatgggcggggcctgcg 85
|||| ||||||||||||||||||||| ||||||| | ||| |||||||| || || |
Sbjct: 481 gcgcccacgccacgttctacggcggcggcgacgcgtccggcacaatgggcggcgcgtgtg 540
Query: 86 ggtacggcaacctgtgacagccaggggtacggcgtgaacaacgcggcgctgagcacggcg 145
||||||| ||| ||| ||||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 541 ggtacgggaacatgt-acagcacggggtacggcacgaacacggcggcgctgagcacggcg 599
Query: 146 ctgttcgacga 156
|||||| ||||
Sbjct: 600 ctgttcaacga 610
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 307,139
Number of Sequences: 832831
Number of extensions: 307139
Number of successful extensions: 91764
Number of sequences better than 0.5: 229
Number of HSP's better than 0.5 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91001
Number of HSP's gapped (non-prelim): 652
length of query: 1044
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1024
effective length of database: 474,703,049
effective search space: 486095922176
effective search space used: 486095922176
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)