BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521334.2.1
(1277 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ656174.1|BQ656174 pRC1204 Sorghum halepense rhizome cD... 1144 0.0
gb|CX617404.1|CX617404 GABR1_33_C04.g1_A002 GA- or brassino... 989 0.0
gb|CD430695.1|CD430695 ETH1_20_E07.g1_A002 Ethylene-treated... 981 0.0
gb|CF480438.1|CF480438 POL1_65_F08.g1_A002 Pollen Sorghum b... 938 0.0
gb|CF480354.1|CF480354 POL1_65_F08.b1_A002 Pollen Sorghum b... 896 0.0
gb|BE356595.1|BE356595 DG1_126_B11.g1_A002 Dark Grown 1 (DG... 860 0.0
gb|CF484980.1|CF484980 POL1_28_E11.g1_A002 Pollen Sorghum b... 852 0.0
gb|BG948209.1|BG948209 IP1_10_F10.g1_A002 Immature pannicle... 839 0.0
gb|BE357348.1|BE357348 DG1_148_C07.g1_A002 Dark Grown 1 (DG... 765 0.0
gb|BG102098.1|BG102098 RHIZ2_24_G08.g1_A003 Rhizome2 (RHIZ2... 753 0.0
gb|AW922911.1|AW922911 DG1_47_B07.b1_A002 Dark Grown 1 (DG1... 751 0.0
gb|AW922927.1|AW922927 DG1_47_B07.g1_A002 Dark Grown 1 (DG1... 747 0.0
gb|BE356543.1|BE356543 DG1_126_B11.b1_A002 Dark Grown 1 (DG... 648 0.0
gb|CD430647.1|CD430647 ETH1_20_E07.b1_A002 Ethylene-treated... 615 e-174
gb|BG948519.1|BG948519 IP1_10_F10.b1_A002 Immature pannicle... 567 e-160
gb|BG488384.1|BG488384 RHIZ2_63_A05.b1_A003 Rhizome2 (RHIZ2... 565 e-159
gb|CF484899.1|CF484899 POL1_28_E11.b1_A002 Pollen Sorghum b... 561 e-158
gb|CF760999.1|CF760999 DSAF1_69_F12.b1_A011 Drought-stresse... 543 e-152
gb|BE358573.1|BE358573 DG1_31_E04.g1_A002 Dark Grown 1 (DG1... 500 e-139
gb|BG102316.1|BG102316 RHIZ2_24_G08.b1_A003 Rhizome2 (RHIZ2... 494 e-137
gb|CW102093.1|CW102093 104_470_11011154_116_34417_011 Sorgh... 488 e-136
gb|CW153908.1|CW153908 104_555_11145300_116_36346_036 Sorgh... 488 e-136
gb|CW153909.1|CW153909 104_555_11145300_148_36345_036 Sorgh... 488 e-136
gb|CW455258.1|CW455258 fsbb001f200a23k0 Sorghum methylation... 488 e-136
gb|CW336889.1|CW336889 104_836_11483843_116_36112_042 Sorgh... 396 e-108
gb|CW025808.1|CW025808 104_227_10488407_116_30503 Sorghum m... 383 e-104
gb|CW289445.1|CW289445 104_768_11412482_116_35546_009 Sorgh... 383 e-104
gb|CW441932.1|CW441932 fsbb001f161f07k0 Sorghum methylation... 383 e-104
gb|AC169375.3| Sorghum bicolor clone SB_BBc0020O07, WORKING... 383 e-104
gb|CW441931.1|CW441931 fsbb001f161f07f0 Sorghum methylation... 375 e-102
gb|CN129755.1|CN129755 RHOH1_37_E12.b1_A002 Acid- and alkal... 355 6e-096
gb|CF482260.1|CF482260 POL1_5_H04.g1_A002 Pollen Sorghum bi... 351 1e-094
gb|BG050036.1|BG050036 FM1_65_F09.b1_A003 Floral-Induced Me... 341 1e-091
gb|BE357269.1|BE357269 DG1_148_D07.b1_A002 Dark Grown 1 (DG... 337 2e-090
gb|CF760240.1|CF760240 DSAF1_57_C03.b1_A011 Drought-stresse... 337 2e-090
gb|BE362230.1|BE362230 DG1_85_D08.b1_A002 Dark Grown 1 (DG1... 333 2e-089
gb|CW336890.1|CW336890 104_836_11483843_148_36108_042 Sorgh... 327 1e-087
gb|AW744951.1|AW744951 LG1_385_B06.b1_A002 Light Grown 1 (L... 327 1e-087
gb|CF428809.1|CF428809 PH1_17_E03.g1_A002 Phosphorous-defic... 317 1e-084
gb|CN134246.1|CN134246 OX1_25_E03.b1_A002 Oxidatively-stres... 309 3e-082
gb|CD225943.1|CD225943 CCC1_42_F11.g1_A007 Callus culture/c... 293 2e-077
gb|CN131364.1|CN131364 RHOH1_47_B12.g1_A002 Acid- and alkal... 291 8e-077
gb|BE358601.1|BE358601 DG1_30_E11.b1_A002 Dark Grown 1 (DG1... 276 5e-072
gb|CN129931.1|CN129931 RHOH1_38_F11.b1_A002 Acid- and alkal... 266 5e-069
gb|CN146586.1|CN146586 WOUND1_42_E08.b1_A002 Wounded leaves... 266 5e-069
gb|CX609506.1|CX609506 ANR1_13_D03.b1_A002 Anaerobic roots ... 266 5e-069
gb|BG049798.1|BG049798 FM1_65_F09.g1_A003 Floral-Induced Me... 250 3e-064
gb|CD221439.1|CD221439 CCC1_54_G12.g1_A007 Callus culture/c... 236 4e-060
gb|CX611887.1|CX611887 ANR1_27_G01.b1_A002 Anaerobic roots ... 236 4e-060
gb|CN131290.1|CN131290 RHOH1_47_B12.b1_A002 Acid- and alkal... 232 6e-059
gb|BG053082.1|BG053082 RHIZ2_16_D07.b1_A003 Rhizome2 (RHIZ2... 226 4e-057
gb|BG103881.1|BG103881 RHIZ2_37_H09.b1_A003 Rhizome2 (RHIZ2... 226 4e-057
gb|CF761539.1|CF761539 DSAF1_77_E05.b1_A011 Drought-stresse... 224 2e-056
gb|BE358403.1|BE358403 DG1_29_B05.g1_A002 Dark Grown 1 (DG1... 222 6e-056
gb|BG053072.1|BG053072 RHIZ2_16_C07.b1_A003 Rhizome2 (RHIZ2... 222 6e-056
gb|CN130018.1|CN130018 RHOH1_38_F11.g1_A002 Acid- and alkal... 222 6e-056
gb|AW565401.1|AW565401 LG1_343_H02.g1_A002 Light Grown 1 (L... 218 1e-054
gb|BE357341.1|BE357341 DG1_148_D07.g1_A002 Dark Grown 1 (DG... 218 1e-054
gb|BE358528.1|BE358528 DG1_31_E04.b1_A002 Dark Grown 1 (DG1... 218 1e-054
gb|BE358636.1|BE358636 DG1_30_E11.g1_A002 Dark Grown 1 (DG1... 214 2e-053
gb|CD235196.1|CD235196 SS1_21_C11.g1_A012 Salt-stressed see... 214 2e-053
gb|BG052205.1|BG052205 RHIZ2_7_E04.b1_A003 Rhizome2 (RHIZ2)... 202 6e-050
gb|BG053093.1|BG053093 RHIZ2_16_E07.b1_A003 Rhizome2 (RHIZ2... 202 6e-050
gb|BG357510.1|BG357510 OV2_30_G08.g1_A002 Ovary 2 (OV2) Sor... 192 6e-047
gb|CD235068.1|CD235068 SS1_21_C11.b1_A012 Salt-stressed see... 182 5e-044
gb|CF428698.1|CF428698 PH1_17_E03.b1_A002 Phosphorous-defic... 182 5e-044
gb|CD225918.1|CD225918 CCC1_42_F11.b1_A007 Callus culture/c... 178 8e-043
gb|BG053007.1|BG053007 RHIZ2_16_C07.g1_A003 Rhizome2 (RHIZ2... 170 2e-040
gb|AW677502.1|AW677502 DG1_8_C01.b1_A002 Dark Grown 1 (DG1)... 163 5e-038
gb|CW204823.1|CW204823 104_633_11186753_148_36926_079 Sorgh... 161 2e-037
gb|AW678166.1|AW678166 WS1_13_H01.g1_A002 Water-stressed 1 ... 161 2e-037
gb|BG356749.1|BG356749 OV2_9_E04.g1_A002 Ovary 2 (OV2) Sorg... 161 2e-037
gb|BG357066.1|BG357066 OV2_9_E04.b1_A002 Ovary 2 (OV2) Sorg... 161 2e-037
gb|BG412581.1|BG412581 OV2_36_B12.g1_A002 Ovary 2 (OV2) Sor... 161 2e-037
gb|BG412892.1|BG412892 OV2_36_B12.b1_A002 Ovary 2 (OV2) Sor... 161 2e-037
gb|CD221496.1|CD221496 CCC1_55_B01.b1_A007 Callus culture/c... 161 2e-037
gb|CF482175.1|CF482175 POL1_5_H04.b1_A002 Pollen Sorghum bi... 161 2e-037
gb|CF771952.1|CF771952 DSBF1_26_F03.g9_A010 Drought-stresse... 161 2e-037
gb|CW477556.1|CW477556 fsbb001f234p01f0 Sorghum methylation... 159 8e-037
gb|BG048173.1|BG048173 OV1_28_F01.g1_A002 Ovary 1 (OV1) Sor... 153 5e-035
gb|BG103167.1|BG103167 RHIZ2_19_A03.g1_A003 Rhizome2 (RHIZ2... 149 7e-034
gb|CF756992.1|CF756992 DSAF1_12_C05.g1_A011 Drought-stresse... 149 7e-034
gb|BG103552.1|BG103552 RHIZ2_37_H09.g1_A003 Rhizome2 (RHIZ2... 145 1e-032
gb|CW025807.1|CW025807 104_227_10488407_114_30507 Sorghum m... 135 1e-029
gb|CW247550.1|CW247550 104_708_11221835_116_35017_038 Sorgh... 135 1e-029
gb|CW289446.1|CW289446 104_768_11412482_148_35550_009 Sorgh... 135 1e-029
gb|CW429933.1|CW429933 fsbb001f143g20k0 Sorghum methylation... 133 4e-029
gb|AW678084.1|AW678084 WS1_13_H01.b1_A002 Water-stressed 1 ... 131 2e-028
gb|BG103339.1|BG103339 RHIZ2_19_A03.b1_A003 Rhizome2 (RHIZ2... 127 3e-027
gb|BG357829.1|BG357829 OV2_30_G08.b1_A002 Ovary 2 (OV2) Sor... 127 3e-027
gb|CN134327.1|CN134327 OX1_25_E03.g1_A002 Oxidatively-stres... 127 3e-027
gb|CW427821.1|CW427821 fsbb001f140a02k0 Sorghum methylation... 125 1e-026
gb|AW287406.2|AW287406 LG1_303_E07.b1_A002 Light Grown 1 (L... 121 2e-025
gb|BG051986.1|BG051986 RHIZ2_7_E04.g1_A003 Rhizome2 (RHIZ2)... 117 3e-024
gb|CW093734.1|CW093734 104_457_10999949_116_37477_031 Sorgh... 113 4e-023
gb|CW299566.1|CW299566 104_782_11463186_148_36236_069 Sorgh... 100 6e-019
gb|AW677613.1|AW677613 DG1_8_C01.g1_A002 Dark Grown 1 (DG1)... 94 4e-017
gb|AW678952.1|AW678952 WS1_21_B11.b1_A002 Water-stressed 1 ... 94 4e-017
gb|BF655741.1|BF655741 FM1_48_D12.b1_A003 Floral-Induced Me... 88 2e-015
gb|AW744998.1|AW744998 LG1_385_B06.g1_A002 Light Grown 1 (L... 86 9e-015
gb|BE360723.1|BE360723 DG1_66_F04.g2_A002 Dark Grown 1 (DG1... 86 9e-015
gb|BG047850.1|BG047850 OV1_28_F01.b1_A002 Ovary 1 (OV1) Sor... 84 4e-014
gb|CF427447.1|CF427447 PH1_1_B02.g1_A002 Phosphorous-defici... 84 4e-014
gb|CN129835.1|CN129835 RHOH1_37_E12.g1_A002 Acid- and alkal... 84 4e-014
gb|CW050265.1|CW050265 104_290_10514553_114_30195 Sorghum m... 78 2e-012
gb|CW158532.1|CW158532 104_564_11148871_116_36395_026 Sorgh... 78 2e-012
gb|CW224969.1|CW224969 104_662_11204102_148_37205_057 Sorgh... 78 2e-012
gb|CW299565.1|CW299565 104_782_11463186_116_36235_069 Sorgh... 78 2e-012
gb|CW318108.1|CW318108 104_810_11473774_116_35874_093 Sorgh... 78 2e-012
gb|CW429932.1|CW429932 fsbb001f143g20f0 Sorghum methylation... 78 2e-012
gb|CW102094.1|CW102094 104_470_11011154_148_34413_011 Sorgh... 74 4e-011
gb|BG488077.1|BG488077 RHIZ2_63_A05.g1_A003 Rhizome2 (RHIZ2... 74 4e-011
gb|BZ695603.1|BZ695603 SP__Ba0066B13.r SP__Ba Sorghum propi... 70 6e-010
gb|CW790150.1|CW790150 SP__Ba0066B13.r SP__Ba Sorghum propi... 70 6e-010
gb|CX623174.1|CX623174 GABR1_68_D09.b1_A002 GA- or brassino... 70 6e-010
gb|AW282669.1|AW282669 LG1_303_E07.g1_A002 Light Grown 1 (L... 60 5e-007
gb|CF771949.1|CF771949 DSBF1_26_E11.g9_A010 Drought-stresse... 60 5e-007
gb|BE360652.1|BE360652 DG1_66_F04.b2_A002 Dark Grown 1 (DG1... 56 8e-006
gb|CX611976.1|CX611976 ANR1_27_G01.g1_A002 Anaerobic roots ... 56 8e-006
gb|CW204822.1|CW204822 104_633_11186753_116_36925_079 Sorgh... 54 3e-005
gb|AW282656.2|AW282656 LG1_303_G11.g1_A002 Light Grown 1 (L... 50 5e-004
gb|BE593171.1|BE593171 WS1_98_D07.g1_A002 Water-stressed 1 ... 50 5e-004
gb|BE593481.1|BE593481 WS1_98_D07.b1_A002 Water-stressed 1 ... 50 5e-004
gb|CX609593.1|CX609593 ANR1_13_D03.g1_A002 Anaerobic roots ... 50 5e-004
gb|BF704822.1|BF704822 FM1_52_A02.b1_A003 Floral-Induced Me... 46 0.008
gb|CF427467.1|CF427467 PH1_1_H01.g1_A002 Phosphorous-defici... 46 0.008
gb|CX623264.1|CX623264 GABR1_68_D09.g1_A002 GA- or brassino... 46 0.008
gb|CN146642.1|CN146642 WOUND1_42_E08.g1_A002 Wounded leaves... 42 0.12
gb|CL185608.1|CL185608 104_399_10899654_114_32391_017 Sorgh... 40 0.49
gb|CW027067.1|CW027067 104_253_10498301_114_30534 Sorghum m... 40 0.49
gb|CW100784.1|CW100784 104_468_11004291_148_34392_010 Sorgh... 40 0.49
gb|CW156810.1|CW156810 104_559_11146890_148_36377_065 Sorgh... 40 0.49
gb|CW161949.1|CW161949 104_569_11150680_148_36438_064 Sorgh... 40 0.49
gb|CW197754.1|CW197754 104_622_11181850_116_36828_043 Sorgh... 40 0.49
gb|CW215579.1|CW215579 104_648_11194612_116_37116_016 Sorgh... 40 0.49
gb|CW237004.1|CW237004 104_693_11215927_148_37519_028 Sorgh... 40 0.49
gb|CW255520.1|CW255520 104_720_11226281_148_35403_077 Sorgh... 40 0.49
gb|CW276012.1|CW276012 104_749_11405262_116_35389_023 Sorgh... 40 0.49
gb|CW371406.1|CW371406 fsbb001f046n15f0 Sorghum methylation... 40 0.49
gb|CW401866.1|CW401866 fsbb001f092o05k0 Sorghum methylation... 40 0.49
gb|CW445042.1|CW445042 fsbb001f166p03k0 Sorghum methylation... 40 0.49
gb|CW482566.1|CW482566 fsbb001f242l16f0 Sorghum methylation... 40 0.49
gb|BE597399.1|BE597399 PI1_69_A11.b1_A002 Pathogen induced ... 40 0.49
>gb|BQ656174.1|BQ656174 pRC1204 Sorghum halepense rhizome cDNA library Sorghum halepense cDNA
clone pRC1204, mRNA sequence
Length = 856
Score = 1144 bits (577), Expect = 0.0
Identities = 679/711 (95%), Gaps = 4/711 (0%)
Strand = Plus / Plus
Query: 367 gcggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacc 426
||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 2 gcggcgcggaagtggcagcccgggaacagagtgctcgtcgagatcgcctgcacgcgcacc 61
Query: 427 tccgcgcagatcttcgcgaccaggcaggcttatcacgagc-ggttcaagcgctcgcttga 485
||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||
Sbjct: 62 tccgcgcaggtcttcgcggccaggcaggcgtatcacgagcaggttcaagcgctcgcttga 121
Query: 486 ggaagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaag 545
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 122 ggaggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaag 181
Query: 546 tacttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaact 605
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tacataccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaact 241
Query: 606 acttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcac 665
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actccatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcac 301
Query: 666 cactaggagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggcca 725
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 302 cactaggagcaaacctcagctgcttgctacattcaatcattacaatgatgcatttggcca 361
Query: 726 ccgaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggc 785
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 362 ccgaatcaacaaggatctgaaggctgaccccaaggacgagtacctcaaaacgctgcgggc 421
Query: 786 gatcatccggtgcttcagttgccctgacaggtactttgagaaggtggctaggcaggccat 845
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 422 aatcatccggtgcttcagttgccctgacaggtactttgagaaggtcgctaggcaggccat 481
Query: 846 agcggggctaggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggt 905
|||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||
Sbjct: 482 agcggggctaggcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggt 541
Query: 906 ggacctcaaactgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggc 965
|||||| || |||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 542 ggacctgaagctgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgc 601
Query: 966 cgtcgcgggggacacctccggcgactacgagagcatgctcctcgcgctcctggggcagga 1025
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 602 cgtcgctggggacacctccggcgactacgagagcatgctcctcgcgctccttgggcagga 661
Query: 1026 gtgatgagccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
||||||||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 662 gtgatgagccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 709
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 803 cagtggtgataaataagttactgtgttttcgacgaatgaac 843
Score = 40.1 bits (20), Expect = 0.49
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 1091 aataaacctgat-tgcctagctgtacgtgaggctgtttcttcgg 1133
|||||||||| | ||||||||||||| ||||| ||||||||||
Sbjct: 729 aataaacctggtatgcctagctgtacctgaggtggtttcttcgg 772
>gb|CX617404.1|CX617404 GABR1_33_C04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_33_C04_A002 5', mRNA sequence
Length = 762
Score = 989 bits (499), Expect = 0.0
Identities = 553/571 (96%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 251
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 311
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 312 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 371
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 372 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 431
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagta 547
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 432 aggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaagta 491
Query: 548 cttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactac 607
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cataccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactac 551
Query: 608 ttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcacca 667
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tccatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcacca 611
Query: 668 ctaggagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggccacc 727
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ctaggagcaaacctcagctgcttgctacattcaatcattacaatgatgcatttggccacc 671
Query: 728 gaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcga 787
||||||||||||||||||||||||||||| |||| |||||||||| ||| |||||||| |
Sbjct: 672 gaatcaacaaggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaa 731
Query: 788 tcatccggtgcttcagttgccctgacaggta 818
|||||||||||||||||||||| ||||||||
Sbjct: 732 tcatccggtgcttcagttgccccgacaggta 762
Score = 202 bits (102), Expect = 6e-050
Identities = 126/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| ||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 14 tcacagtcaccaggaacggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 73
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 133
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 134 tccatcctcggcca 147
>gb|CD430695.1|CD430695 ETH1_20_E07.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_E07_A002 5', mRNA sequence
Length = 693
Score = 981 bits (495), Expect = 0.0
Identities = 594/625 (95%), Gaps = 4/625 (0%)
Strand = Plus / Plus
Query: 452 aggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactg 511
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 27 aggcgtatcacgagcggttcaagcgctcgcttgaggaggacatcgctgcgcacgtcactg 86
Query: 512 gggacttccgcaagctattggtgccacttgtaagtacttaccgctatgatggaccagagg 571
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 87 gggacttccgcaagctactggtgccacttgtaagtacataccgctatgatggaccagagg 146
Query: 572 tcaacacaaggttggcacactcagaagccaaactacttcatgagaagatccatcacaagg 631
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 147 tcaacacaaggttggcacactcagaagccaaactactccatgagac-atccatcacaagg 205
Query: 632 cttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgattg 691
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 206 cttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgcttg 265
Query: 692 ctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctg 325
Query: 752 acccccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctg 811
||||| |||| |||||||||| ||| |||||||| ||||||||||||||||||||||| |
Sbjct: 326 accccaaggatgagtacctcaaaacactgcgggcaatcatccggtgcttcagttgccccg 385
Query: 812 acaggtactttgagaaggtggctaggcaggccatagcggggctaggcacagatgagaact 871
||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 386 acaggtactttgagaaggtcgccaggcaggccatagcggggctaggcacagacgagaacg 445
Query: 872 ccctgaccagggtcatcaccacccgcgctgaggtggacctcaaactgattaaggaggcgt 931
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 446 ccctgaccagggtcattaccacccgcgctgaggtggacctgaaactgattaaggaggcgt 505
Query: 932 accagaagaggaacagcgtgccgctggagcgggccgtcgcgggggacacctccggcgact 991
|||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct: 506 accagaagaggaacagcgtgcccctggagcgcgccgtcgctggggacacctccggcgact 565
Query: 992 acgagagcatgctcctcgcgctcctggggcaggagtgatgagccgtactggtgcgctggt 1051
||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |
Sbjct: 566 acgagagcatgctcctcgcgctccttgggcaggagtgatgagccg---tggtgcactgtt 622
Query: 1052 gcctttctgaccggcgccgtggtgt 1076
|| | ||||||||||||||||||||
Sbjct: 623 gcgtctctgaccggcgccgtggtgt 647
>gb|CF480438.1|CF480438 POL1_65_F08.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_F08_A002 5', mRNA sequence
Length = 774
Score = 938 bits (473), Expect = 0.0
Identities = 545/565 (96%), Gaps = 3/565 (0%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 267
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 327
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 328 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 387
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagc-gctcgcttgag 486
|||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 388 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcngctcgcttgag 447
Query: 487 gaagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagt 546
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 448 gaggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaagt 507
Query: 547 acttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaacta 606
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acataccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaacta 567
Query: 607 cttcatgagaagatccatcacaaggc-ttacagtgatgatgagatcatcagaatcctcac 665
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 568 ctccatgagaagatccatcacaaggctttacagtgatgatgagatcatcagaatcctcac 627
Query: 666 cactaggagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggcca 725
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 628 cactaggagcaaacctcagctgcttgctacattcaatcattacaatgatgcatttggcca 687
Query: 726 ccgaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggc 785
||||||||||||||||||||||||||||||| |||| |||||||||| ||| ||||||||
Sbjct: 688 ccgaatcaacaaggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggc 747
Query: 786 gatcatcc-ggtgcttcagttgccc 809
||||||| ||||||||||||||||
Sbjct: 748 aatcatccgggtgcttcagttgccc 772
Score = 89.7 bits (45), Expect = 6e-016
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 159 agggtggggcacgaacgaggcgctcatcatctccatcctcggcca 203
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 agggtggggcacgaacgaggcgctcatcatctccatcctcggcca 163
>gb|CF480354.1|CF480354 POL1_65_F08.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_65_F08_A002 3', mRNA sequence
Length = 737
Score = 896 bits (452), Expect = 0.0
Identities = 587/622 (94%), Gaps = 10/622 (1%)
Strand = Plus / Plus
Query: 462 cgagcggttcaagcgctcgcttgaggaagacatcgctgcgc-acgtcactggggacttcc 520
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 1 cgagcggttcaagcgctcgcttgaggaggacatcgctgcgccacgtcactggggacttcc 60
Query: 521 gcaagc-tattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacaca 579
|||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gcaagcctactggtgccacttgtaagtacataccgctatgatggaccagaggtcaacaca 120
Query: 580 aggtt-ggcacactcagaagcc-aaactacttc-atgagaagatccatcac-aaggctta 635
||||| |||||||||||||||| |||||||| | ||||||||||||||||| ||||||||
Sbjct: 121 aggttnggcacactcagaagccnaaactactcccatgagaagatccatcaccaaggctta 180
Query: 636 cagtgatgatgagatcatcagaatcctcacca-ctaggagcaaacctcagctgattgcta 694
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 181 cagtgatgatgagatcatcagaatcctcaccanctaggagcaaacctcagctgcttgcta 240
Query: 695 cattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacc 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacc 300
Query: 755 cccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctgaca 814
|| |||| |||||||||| ||| |||||||| ||||||||||||||||||||||| ||||
Sbjct: 301 ccaaggatgagtacctcaaaacactgcgggcaatcatccggtgcttcagttgccccgaca 360
Query: 815 ggtactttgagaaggtggctaggcaggccatagcggggctaggcacagatgagaactccc 874
|||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||
Sbjct: 361 ggtactttgagaaggtcgccaggcaggccatagcggggctaggcacagacgagaacgccc 420
Query: 875 tgaccagggtcatcaccacccgcgctgaggtggacctcaaactgattaaggaggcgtacc 934
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 tgaccagggtcattaccacccgcgctgaggtggacctgaaactgattaaggaggcgtacc 480
Query: 935 agaagaggaacagcgtgccgctggagcgggccgtcgcgggggacacctccggcgactacg 994
||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct: 481 agaagaggaacagcgtgcccctggagcgcgccgtcgctggggacacctccggcgactacg 540
Query: 995 agagcatgctcctcgcgctcctggggcaggagtgatgagccgtactggtgcgctggtgcc 1054
|||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||
Sbjct: 541 agagcatgctcctcgcgctcctcgggcaggagtgatgagccg---tggtgcactgttgcg 597
Query: 1055 tttctgaccggcgccgtggtgt 1076
| ||||||||||||||||||||
Sbjct: 598 tctctgaccggcgccgtggtgt 619
Score = 50.1 bits (25), Expect = 5e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtg 1195
|||||||||||||||||||||||||
Sbjct: 713 cagtggtgataaataagttactgtg 737
>gb|BE356595.1|BE356595 DG1_126_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 860 bits (434), Expect = 0.0
Identities = 494/514 (96%)
Strand = Plus / Plus
Query: 524 agctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaaggt 583
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 agctactggtgccacttgtaagtacataccgctatgatggaccagaggtcaacacaaggt 60
Query: 584 tggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgatg 643
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcacactcagaagccaaactactccatgagaagatccatcacaaggcttacagtgatg 120
Query: 644 atgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaatc 703
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 atgagatcatcagaatcctcaccactaggagcaaacctcagctgcttgctacattcaatc 180
Query: 704 attacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccaggacg 763
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 181 attacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgaccccaaggatg 240
Query: 764 agtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctgacaggtactttg 823
||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 241 agtacctcaaaacactgcgggcaatcatccggtgcttcagttgccccgacaggtactttg 300
Query: 824 agaaggtggctaggcaggccatagcggggctaggcacagatgagaactccctgaccaggg 883
||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 301 agaaggtcgccaggcaggccatagcggggctaggcacagacgagaacgccctgaccaggg 360
Query: 884 tcatcaccacccgcgctgaggtggacctcaaactgattaaggaggcgtaccagaagagga 943
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 tcattaccacccgcgctgaggtggacctgaaactgattaaggaggcgtaccagaagagga 420
Query: 944 acagcgtgccgctggagcgggccgtcgcgggggacacctccggcgactacgagagcatgc 1003
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 421 acagcgtgcccctggagcgcgccgtcgctggggacacctccggcgactacgagagcatgc 480
Query: 1004 tcctcgcgctcctggggcaggagtgatgagccgt 1037
||||||||||||| ||||||||||||||||||||
Sbjct: 481 tcctcgcgctccttgggcaggagtgatgagccgt 514
>gb|CF484980.1|CF484980 POL1_28_E11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_28_E11_A002 5', mRNA sequence
Length = 668
Score = 852 bits (430), Expect = 0.0
Identities = 469/482 (97%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 187 aggcccacggcgaggagctcctccgctccatcacggacgtgatctccggcgacttcgaga 246
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 306
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 307 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 366
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 367 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 426
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagta 547
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 427 aggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaagta 486
Query: 548 cttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactac 607
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cataccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactac 546
Query: 608 ttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcacca 667
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tccatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcacca 606
Query: 668 ctaggagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggccacc 727
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctaggagcaaacctcagctgcttgctacattcaatcattacaatgatgcatttggccacc 666
Query: 728 ga 729
||
Sbjct: 667 ga 668
Score = 210 bits (106), Expect = 2e-052
Identities = 127/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 9 tcacagtcaccgggagtggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 68
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 128
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 129 tccatcctcggcca 142
>gb|BG948209.1|BG948209 IP1_10_F10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 669
Score = 839 bits (423), Expect = 0.0
Identities = 500/525 (95%), Gaps = 3/525 (0%)
Strand = Plus / Plus
Query: 552 ccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactacttca 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactactcca 60
Query: 612 tgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcaccactag 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcaccactag 120
Query: 672 gagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggccaccgaat 731
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcaaacctcagctgcttgctacattcaatcattacaatgatgcatttggccaccgaat 180
Query: 732 caacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcat 791
||||||||||||||||||||||||| |||| |||||||||| ||| |||||||| |||||
Sbjct: 181 caacaaggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatcat 240
Query: 792 ccggtgcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagcggg 851
|||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 241 ccggtgcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagcggg 300
Query: 852 gctaggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacct 911
|||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 gctaggcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtggacct 360
Query: 912 caaactgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgtcgc 971
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 361 gaaactgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgtcgc 420
Query: 972 gggggacacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtgatg 1031
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 tggggacacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtgatg 480
Query: 1032 agccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 481 agccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 522
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 616 cagtggtgataaataagttactgtgttttcgacgaatgaac 656
>gb|BE357348.1|BE357348 DG1_148_C07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 686
Score = 765 bits (386), Expect = 0.0
Identities = 466/492 (94%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 585 ggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgatga 644
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcacactcagaagccaaactactccatgagaagatccatcacaaggcttacagtgatga 60
Query: 645 tgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaatca 704
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 tgagatcatcagaatcctcaccactaggagcaaacctcagctgcttgctacattcaatca 120
Query: 705 ttacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccaggacga 764
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 121 ttacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgaccccaaggatga 180
Query: 765 gtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctgacaggtactttga 824
|||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 gtacctcaaaacactgcgggcaatcatccggtgcttcagttgccccgacaggtactttga 240
Query: 825 gaaggtggctaggcaggccatagcggggctaggcacagatgagaactccctgaccagggt 884
|||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 241 gaaggtcgccaggcaggccatagcggggctaggcacagacgagaacgccctgaccagggt 300
Query: 885 catcaccacccgcgctgaggtggacctcaaactgattaaggaggcgtaccagaagaggaa 944
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 tattaccacccgcgctgaggtggacctgaaactgattaaggaggcgtaccagaagaggaa 360
Query: 945 cagcgtgccgctggagcgggccgtcgcgggggacacctccggcgactacgagagcatgct 1004
||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 cagcgtgcccctggagcgcgccgtcgctggggacacctccggcgactacgagagcatgct 420
Query: 1005 cctcgcgctcctggggcaggagtgatgagccgtactggtgcgctggtgcctttctgaccg 1064
|||||||||||| ||||||||||||||||||| |||||| ||| ||| | ||||||||
Sbjct: 421 cctcgcgctccttgggcaggagtgatgagccg---tggtgcactgttgcgtctctgaccg 477
Query: 1065 gcgccgtggtgt 1076
||||||||||||
Sbjct: 478 gcgccgtggtgt 489
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 583 cagtggtgataaataagttactgtgttttcgacgaatgaac 623
>gb|BG102098.1|BG102098 RHIZ2_24_G08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 594
Score = 753 bits (380), Expect = 0.0
Identities = 454/478 (94%), Gaps = 3/478 (0%)
Strand = Plus / Plus
Query: 599 ccaaactacttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaa 658
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ccaaactactccatgagaagatccatcacaaagcttacagtgatgatgagatcatcagaa 60
Query: 659 tcctcaccactaggagcaaacctcagctgattgctacattcaatcattacaatgatgcat 718
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tcctcaccactaggagcaaacctcagctgcttgctacattcaatcattacaatgatgcat 120
Query: 719 ttggccaccgaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgc 778
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 121 ttggccaccgaatcaacaaggatctgaaggctgaccccaaggacgagtacctcaaaacgc 180
Query: 779 tgcgggcgatcatccggtgcttcagttgccctgacaggtactttgagaaggtggctaggc 838
| ||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 181 ttcgggcaatcatccggtgcttcagttgccctgacaggtactttgagaaggtcgccaggc 240
Query: 839 aggccatagcggggctaggcacagatgagaactccctgaccagggtcatcaccacccgcg 898
||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 241 aggccatagcggggctaggcacagacgagaacgccctgaccagggtcattaccacccgcg 300
Query: 899 ctgaggtggacctcaaactgattaaggaggcgtaccagaagaggaacagcgtgccgctgg 958
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 ctgaggtggacctgaaactgattaaggaggcgtaccagaagaggaacagcgtgcccctgg 360
Query: 959 agcgggccgtcgcgggggacacctccggcgactacgagagcatgctcctcgcgctcctgg 1018
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 agcgcgccgtcgctggggacacctccggcgactacgagagcatgctcctcgcgctccttg 420
Query: 1019 ggcaggagtgatgagccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 421 ggcaggagtgatgagccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 475
Score = 46.1 bits (23), Expect = 0.008
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactg 1193
|||||||||||||||||||||||
Sbjct: 569 cagtggtgataaataagttactg 591
Score = 40.1 bits (20), Expect = 0.49
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 1091 aataaacctgat-tgcctagctgtacgtgaggctgtttcttcgg 1133
|||||||||| | ||||||||||||| ||||| ||||||||||
Sbjct: 495 aataaacctggtatgcctagctgtacctgaggtggtttcttcgg 538
>gb|AW922911.1|AW922911 DG1_47_B07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 443
Score = 751 bits (379), Expect = 0.0
Identities = 427/443 (96%)
Strand = Plus / Plus
Query: 400 ctcgtcgagatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttat 459
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||
Sbjct: 1 ctcgtcgagatcgcctgcacgcgcacctccgcgcaggtcttcgcggccaggcaggcgtat 60
Query: 460 cacgagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttc 519
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 cacgagcggttcaagcgctcgcttgaggaggacatcgctgcgcacgtcactggggacttc 120
Query: 520 cgcaagctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacaca 579
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 121 cgcaagctactggtgccacttgtaagtacataccgctatgatggaccagaggtcaacaca 180
Query: 580 aggttggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagt 639
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 aggttggcacactcagaagccaaactactccatgagaagatccatcacaaggcttacagt 240
Query: 640 gatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattc 699
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 gatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgcttgctacattc 300
Query: 700 aatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccag 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 301 aatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgaccccaag 360
Query: 760 gacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctgacaggtac 819
|| |||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 361 gatgagtacctcaaaacactgcgggcaatcatccggtgcttcagttgccccgacaggtac 420
Query: 820 tttgagaaggtggctaggcaggc 842
||||||||||| || ||||||||
Sbjct: 421 tttgagaaggtcgccaggcaggc 443
>gb|AW922927.1|AW922927 DG1_47_B07.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 563
Score = 747 bits (377), Expect = 0.0
Identities = 454/479 (94%), Gaps = 3/479 (0%)
Strand = Plus / Plus
Query: 598 gccaaactacttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcaga 657
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaaactactccatgagaagatccatcacaaggcttacagtgatgatgagatcatcaga 60
Query: 658 atcctcaccactaggagcaaacctcagctgattgctacattcaatcattacaatgatgca 717
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 atcctcaccactaggagcaaacctcagctgcttgctacattcaatcattacaatgatgca 120
Query: 718 tttggccaccgaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacg 777
||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||
Sbjct: 121 tttggccaccgaatcaacaaggatctgaaggctgaccccaaggatgagtacctcaaaaca 180
Query: 778 ctgcgggcgatcatccggtgcttcagttgccctgacaggtactttgagaaggtggctagg 837
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct: 181 ctgcgggcaatcatccggtgcttcagttgccccgacaggtactttgagaaggtcgccagg 240
Query: 838 caggccatagcggggctaggcacagatgagaactccctgaccagggtcatcaccacccgc 897
|||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||
Sbjct: 241 caggccatagcggggctaggcacagacgagaacgccctgaccagggtcattaccacccgc 300
Query: 898 gctgaggtggacctcaaactgattaaggaggcgtaccagaagaggaacagcgtgccgctg 957
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 gctgaggtggacctgaaactgattaaggaggcgtaccagaagaggaacagcgtgcccctg 360
Query: 958 gagcgggccgtcgcgggggacacctccggcgactacgagagcatgctcctcgcgctcctg 1017
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcgcgccgtcgctggggacacctccggcgactacgagagcatgctcctcgcgctcctt 420
Query: 1018 gggcaggagtgatgagccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
||||||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 421 gggcaggagtgatgagccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 476
>gb|BE356543.1|BE356543 DG1_126_B11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 561
Score = 648 bits (327), Expect = 0.0
Identities = 360/371 (97%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 250
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 310
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 311 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 370
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 371 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 430
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagta 547
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 431 aggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaagta 490
Query: 548 cttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactac 607
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cataccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactac 550
Query: 608 ttcatgagaag 618
| |||||||||
Sbjct: 551 tccatgagaag 561
Score = 218 bits (110), Expect = 1e-054
Identities = 128/134 (95%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 13 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 72
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 132
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 133 tccatcctcggcca 146
>gb|CD430647.1|CD430647 ETH1_20_E07.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_E07_A002 3', mRNA sequence
Length = 615
Score = 615 bits (310), Expect = e-174
Identities = 384/408 (94%), Gaps = 3/408 (0%)
Strand = Plus / Plus
Query: 669 taggagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggccaccg 728
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggagcaaacctcagctgcttgctacattcaatcattacaatgatgcatttggccaccg 60
Query: 729 aatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgat 788
|||||||||||||||||||||||||||| |||| |||||||||| ||| |||||||| ||
Sbjct: 61 aatcaacaaggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaat 120
Query: 789 catccggtgcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagc 848
||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 121 catccggtgcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagc 180
Query: 849 ggggctaggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtgga 908
||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 181 ggggctaggcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtgga 240
Query: 909 cctcaaactgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgt 968
||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 241 cctgaaactgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgt 300
Query: 969 cgcgggggacacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtg 1028
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 cgctggggacacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtg 360
Query: 1029 atgagccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 361 atgagccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 405
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 499 cagtggtgataaataagttactgtgttttcgacgaatgaac 539
>gb|BG948519.1|BG948519 IP1_10_F10.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 523
Score = 567 bits (286), Expect = e-160
Identities = 316/326 (96%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 257
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 317
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 318 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 377
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 378 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 437
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagta 547
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 438 aggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaagta 497
Query: 548 cttaccgctatgatggaccagaggtc 573
| ||||||||||||||||||||||||
Sbjct: 498 cataccgctatgatggaccagaggtc 523
Score = 218 bits (110), Expect = 1e-054
Identities = 128/134 (95%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 20 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 79
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 139
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 140 tccatcctcggcca 153
>gb|BG488384.1|BG488384 RHIZ2_63_A05.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 515
Score = 565 bits (285), Expect = e-159
Identities = 315/325 (96%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 250
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 310
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 311 cggcgcggaagtggcagcccgggaacagagtgctcgtcgagatcgcctgcacgcgcacct 370
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 371 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 430
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagta 547
| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 431 aggacatcgctgcgcacgtcactggggacttccgcaagctactggtgccacttgtaagta 490
Query: 548 cttaccgctatgatggaccagaggt 572
| |||||||||||||||||||||||
Sbjct: 491 cataccgctatgatggaccagaggt 515
Score = 210 bits (106), Expect = 2e-052
Identities = 127/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 13 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgac 72
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 132
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 133 tccatcctcggcca 146
>gb|CF484899.1|CF484899 POL1_28_E11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_28_E11_A002 3', mRNA sequence
Length = 690
Score = 561 bits (283), Expect = e-158
Identities = 357/381 (93%), Gaps = 3/381 (0%)
Strand = Plus / Plus
Query: 696 attcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgaccc 755
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 attcaatcattacaatgatgcatttggccaccgaaccaacaaggatctgaaggctgaccc 60
Query: 756 ccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctgacag 815
| |||| |||||||||| ||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 61 caaggatgagtacctcaaaacactgcgggcaatcatccggtgcttcagttgccccgacag 120
Query: 816 gtactttgagaaggtggctaggcaggccatagcggggctaggcacagatgagaactccct 875
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 121 gtactttgagaaggtcgccaggcaggccatagcggggctaggcacagacgagaacgccct 180
Query: 876 gaccagggtcatcaccacccgcgctgaggtggacctcaaactgattaaggaggcgtacca 935
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 gaccagggtcattaccacccgcgctgaggtggacctgaaactgattaaggaggcgtacca 240
Query: 936 gaagaggaacagcgtgccgctggagcgggccgtcgcgggggacacctccggcgactacga 995
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct: 241 gaagaggaacagcgtgcccctggagcgcgccgtcgctggggacacctccggcgactacga 300
Query: 996 gagcatgctcctcgcgctcctggggcaggagtgatgagccgtactggtgcgctggtgcct 1055
||||||||||||||||||||| ||||||||||||||||||| |||||| ||| ||| |
Sbjct: 301 gagcatgctcctcgcgctccttgggcaggagtgatgagccg---tggtgcactgttgcgt 357
Query: 1056 ttctgaccggcgccgtggtgt 1076
||||||||||||||||||||
Sbjct: 358 ctctgaccggcgccgtggtgt 378
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 472 cagtggtgataaataagttactgtgttttcgacgaatgaac 512
>gb|CF760999.1|CF760999 DSAF1_69_F12.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_69_F12_A011 5', mRNA sequence
Length = 536
Score = 543 bits (274), Expect = e-152
Identities = 307/318 (96%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 278
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 338
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 339 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 398
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 399 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 458
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagta 547
| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 459 aggacatcgctacgcacgtcactggggacttccgcaagctactggtgccacttgtaagta 518
Query: 548 cttaccgctatgatggac 565
| ||||||||||||||||
Sbjct: 519 cataccgctatgatggac 536
Score = 210 bits (106), Expect = 2e-052
Identities = 127/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 41 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 100
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 101 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcgtc 160
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 161 tccatcctcggcca 174
>gb|BE358573.1|BE358573 DG1_31_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 578
Score = 500 bits (252), Expect = e-139
Identities = 323/346 (93%), Gaps = 3/346 (0%)
Strand = Plus / Plus
Query: 731 tcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatca 790
|||||||||||||||||||||||||| |||| |||||||||| ||| |||||||| ||||
Sbjct: 1 tcaacaaggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatca 60
Query: 791 tccggtgcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagcgg 850
||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct: 61 tccggtgcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagcgg 120
Query: 851 ggctaggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacc 910
||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 ggctaggcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtggacc 180
Query: 911 tcaaactgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgtcg 970
| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 181 tgaaactgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgtcg 240
Query: 971 cgggggacacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtgat 1030
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 ctggggacacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtgat 300
Query: 1031 gagccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 301 gagccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 343
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 437 cagtggtgataaataagttactgtgttttcgacgaatgaac 477
>gb|BG102316.1|BG102316 RHIZ2_24_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 511
Score = 494 bits (249), Expect = e-137
Identities = 273/281 (97%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 286
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 346
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 347 cggcgcggaagtggcagcccgggaacagagtgctcgtcgagatcgcctgcacgcgcacct 406
Query: 428 ccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgagg 487
|||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 407 ccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttgagg 466
Query: 488 aagacatcgctgcgcacgtcactggggacttccgcaagcta 528
| |||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aggacatcgctgcgcacgtcactggggacttccgcaagcta 507
Score = 210 bits (106), Expect = 2e-052
Identities = 127/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 49 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgac 108
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 168
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 169 tccatcctcggcca 182
>gb|CW102093.1|CW102093 104_470_11011154_116_34417_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11011154, DNA
sequence
Length = 634
Score = 488 bits (246), Expect = e-136
Identities = 317/340 (93%), Gaps = 3/340 (0%)
Strand = Plus / Plus
Query: 737 aggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggt 796
|||||||||||||||||||| |||| |||||||||| ||| |||||||| ||||||||||
Sbjct: 126 aggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatcatccggt 185
Query: 797 gcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagcggggctag 856
||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 186 gcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagcggggctag 245
Query: 857 gcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaac 916
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 246 gcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtggacctgaaac 305
Query: 917 tgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgtcgcggggg 976
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 306 tgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgtcgctgggg 365
Query: 977 acacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtgatgagccg 1036
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 366 acacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtgatgagccg 425
Query: 1037 tactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||| ||| ||| | ||||||||||||||||||||
Sbjct: 426 ---tggtgcactgttgcgtctctgaccggcgccgtggtgt 462
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 556 cagtggtgataaataagttactgtgttttcgacgaatgaac 596
>gb|CW153908.1|CW153908 104_555_11145300_116_36346_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145300, DNA
sequence
Length = 709
Score = 488 bits (246), Expect = e-136
Identities = 317/340 (93%), Gaps = 3/340 (0%)
Strand = Plus / Plus
Query: 737 aggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggt 796
|||||||||||||||||||| |||| |||||||||| ||| |||||||| ||||||||||
Sbjct: 284 aggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatcatccggt 343
Query: 797 gcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagcggggctag 856
||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 344 gcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagcggggctag 403
Query: 857 gcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaac 916
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 404 gcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtggacctgaaac 463
Query: 917 tgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgtcgcggggg 976
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 464 tgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgtcgctgggg 523
Query: 977 acacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtgatgagccg 1036
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 524 acacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtgatgagccg 583
Query: 1037 tactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||| ||| ||| | ||||||||||||||||||||
Sbjct: 584 ---tggtgcactgttgcgtctctgaccggcgccgtggtgt 620
>gb|CW153909.1|CW153909 104_555_11145300_148_36345_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145300, DNA
sequence
Length = 653
Score = 488 bits (246), Expect = e-136
Identities = 317/340 (93%), Gaps = 3/340 (0%)
Strand = Plus / Minus
Query: 737 aggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggt 796
|||||||||||||||||||| |||| |||||||||| ||| |||||||| ||||||||||
Sbjct: 426 aggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatcatccggt 367
Query: 797 gcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagcggggctag 856
||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 366 gcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagcggggctag 307
Query: 857 gcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaac 916
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 306 gcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtggacctgaaac 247
Query: 917 tgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgtcgcggggg 976
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 246 tgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgtcgctgggg 187
Query: 977 acacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtgatgagccg 1036
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 186 acacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtgatgagccg 127
Query: 1037 tactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||| ||| ||| | ||||||||||||||||||||
Sbjct: 126 ---tggtgcactgttgcgtctctgaccggcgccgtggtgt 90
>gb|CW455258.1|CW455258 fsbb001f200a23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f200a23, DNA
sequence
Length = 472
Score = 488 bits (246), Expect = e-136
Identities = 317/340 (93%), Gaps = 3/340 (0%)
Strand = Plus / Plus
Query: 737 aggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggt 796
|||||||||||||||||||| |||| |||||||||| ||| |||||||| ||||||||||
Sbjct: 45 aggatctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatcatccggt 104
Query: 797 gcttcagttgccctgacaggtactttgagaaggtggctaggcaggccatagcggggctag 856
||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 105 gcttcagttgccccgacaggtactttgagaaggtcgccaggcaggccatagcggggctag 164
Query: 857 gcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaac 916
||||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 165 gcacagacgagaacgccctgaccagggtcattaccacccgcgctgaggtggacctgaaac 224
Query: 917 tgattaaggaggcgtaccagaagaggaacagcgtgccgctggagcgggccgtcgcggggg 976
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 225 tgattaaggaggcgtaccagaagaggaacagcgtgcccctggagcgcgccgtcgctgggg 284
Query: 977 acacctccggcgactacgagagcatgctcctcgcgctcctggggcaggagtgatgagccg 1036
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 285 acacctccggcgactacgagagcatgctcctcgcgctccttgggcaggagtgatgagccg 344
Query: 1037 tactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||| ||| ||| | ||||||||||||||||||||
Sbjct: 345 ---tggtgcactgttgcgtctctgaccggcgccgtggtgt 381
>gb|CW336889.1|CW336889 104_836_11483843_116_36112_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483843, DNA
sequence
Length = 672
Score = 396 bits (200), Expect = e-108
Identities = 212/216 (98%)
Strand = Plus / Plus
Query: 524 agctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaaggt 583
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 63 agctactggtgccacttgtaagtacataccgctatgatggaccagaggtcaacacaaggt 122
Query: 584 tggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgatg 643
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 123 tggcacactcagaagccaaactactccatgagaagatccatcacaaggcttacagtgatg 182
Query: 644 atgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaatc 703
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 183 atgagatcatcagaatcctcaccactaggagcaaacctcagctgcttgctacattcaatc 242
Query: 704 attacaatgatgcatttggccaccgaatcaacaagg 739
||||||||||||||||||||||||||||||||||||
Sbjct: 243 attacaatgatgcatttggccaccgaatcaacaagg 278
>gb|CW025808.1|CW025808 104_227_10488407_116_30503 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10488407, DNA
sequence
Length = 582
Score = 383 bits (193), Expect = e-104
Identities = 214/221 (96%)
Strand = Plus / Minus
Query: 305 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 503
Query: 365 aggcggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgca 424
||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 502 aggcggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgca 443
Query: 425 cctccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttg 484
||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 442 cctccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttg 383
Query: 485 aggaagacatcgctgcgcacgtcactggggacttccgcaag 525
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggaggacatcgctgcgcacgtcactggggacttccgcaag 342
>gb|CW289445.1|CW289445 104_768_11412482_116_35546_009 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412482, DNA
sequence
Length = 556
Score = 383 bits (193), Expect = e-104
Identities = 214/221 (96%)
Strand = Plus / Minus
Query: 305 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 352
Query: 365 aggcggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgca 424
||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 351 aggcggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgca 292
Query: 425 cctccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttg 484
||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 291 cctccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttg 232
Query: 485 aggaagacatcgctgcgcacgtcactggggacttccgcaag 525
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 231 aggaggacatcgctgcgcacgtcactggggacttccgcaag 191
Score = 83.8 bits (42), Expect = 4e-014
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 265 ctcctccgctccatcacggacgagatctccggcgacttcgag 306
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctcctccgctccatcacggacgagatctccggcgacttcgag 515
>gb|CW441932.1|CW441932 fsbb001f161f07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f161f07, DNA
sequence
Length = 651
Score = 383 bits (193), Expect = e-104
Identities = 214/221 (96%)
Strand = Plus / Plus
Query: 305 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 470
Query: 365 aggcggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgca 424
||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 471 aggcggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgca 530
Query: 425 cctccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttg 484
||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 531 cctccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttg 590
Query: 485 aggaagacatcgctgcgcacgtcactggggacttccgcaag 525
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 591 aggaggacatcgctgcgcacgtcactggggacttccgcaag 631
Score = 109 bits (55), Expect = 6e-022
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgag 306
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgag 307
Score = 89.7 bits (45), Expect = 6e-016
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 159 agggtggggcacgaacgaggcgctcatcatctccatcctcggcca 203
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agggtggggcacgaacgaggcgctcatcatctccatcctcggcca 204
>gb|AC169375.3| Sorghum bicolor clone SB_BBc0020O07, WORKING DRAFT SEQUENCE, 11
unordered pieces
Length = 124462
Score = 383 bits (193), Expect = e-104
Identities = 214/221 (96%)
Strand = Plus / Minus
Query: 305 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78138 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 78079
Query: 365 aggcggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgca 424
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 78078 aggcggcgcggaagtggcagcccgggaaccgcgtgctcgtcgagatcgcctgcacgcgca 78019
Query: 425 cctccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttg 484
||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 78018 cctccgcgcaggtcttcgcggccaggcaggcgtaccacgagcggttcaagcgctcgcttg 77959
Query: 485 aggaagacatcgctgcgcacgtcactggggacttccgcaag 525
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 77958 aggaggacatcgctgcgcacgtcactggggacttccgcaag 77918
Score = 109 bits (55), Expect = 6e-022
Identities = 58/59 (98%)
Strand = Plus / Minus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgag 306
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78300 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgag 78242
>gb|CW441931.1|CW441931 fsbb001f161f07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f161f07, DNA
sequence
Length = 608
Score = 375 bits (189), Expect = e-102
Identities = 213/221 (96%)
Strand = Plus / Minus
Query: 305 agagggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaggcccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacg 482
Query: 365 aggcggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgca 424
||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 481 aggcggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgca 422
Query: 425 cctccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttg 484
||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 cctccgcgcaggtcttcgcggccaggcaggcgtatcacgagcggttcaagcgctcgcttg 362
Query: 485 aggaagacatcgctgcgcacgtcactggggacttccgcaag 525
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggaggacatcgctgcgcacgtcactggggacttccgcaag 321
>gb|CN129755.1|CN129755 RHOH1_37_E12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E12_A002 3', mRNA sequence
Length = 860
Score = 355 bits (179), Expect = 6e-096
Identities = 431/515 (83%)
Strand = Plus / Plus
Query: 313 gtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgaggcggcg 372
||||||||||||||||||||||| |||||| | |||||||||||||| ||||||| ||||
Sbjct: 8 gtgatcctgtggacgctggaccccgcggagagggacgcggtgctggcgaacgaggaggcg 67
Query: 373 cggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacctccgcg 432
||| ||| | ||||| ||| | ||| || |||||||| ||| |||||||| |||||
Sbjct: 68 aagaaatggcaccccggcggccgcgcgctggtggagatcgcgtgcgcgcgcacccccgcg 127
Query: 433 cagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcgcttgaggaagac 492
||| |||||||| ||| |||||| || ||||| || |||||||||||||| ||||| |||
Sbjct: 128 cagctcttcgcggccaagcaggcgtaccacgaccgcttcaagcgctcgctcgaggaggac 187
Query: 493 atcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaagtacttac 552
|||| ||||||||||| || |||||||||||||| |||||||| ||||||||| | |||
Sbjct: 188 gtcgcggcgcacgtcaccggcgacttccgcaagctgttggtgcctcttgtaagtgcatac 247
Query: 553 cgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaactacttcat 612
||||||||||| |||||||| ||||| ||||| || || ||||||||| | ||||||
Sbjct: 248 cgctatgatggcccagaggtgaacacgtctttggcccattctgaagccaaaattcttcat 307
Query: 613 gagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctcaccactagg 672
||||||||| || | |||||||||||||| || ||||||||||| || |||||||| ||
Sbjct: 308 gagaagatcgataaaaaggcttacagtgacgaggagatcatcaggattctcaccacgcgg 367
Query: 673 agcaaacctcagctgattgctacattcaatcattacaatgatgcatttggccaccgaatc 732
|||||| ||||||| |||| ||||||||| | ||||| ||| ||||| || ||||
Sbjct: 368 agcaaagctcagctacttgcaacattcaataactacaaggatcagtttggtcatgcaatc 427
Query: 733 aacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatc 792
|||||||||||||| ||||||||| |||| |||| ||| ||| ||||| |||||||||
Sbjct: 428 aacaaggatctgaaagctgaccccaaggatgagttcctttcaacactgcgagcgatcatc 487
Query: 793 cggtgcttcagttgccctgacaggtactttgagaa 827
|||||||||| ||||||||||| ||||| |||||
Sbjct: 488 cggtgcttcacctgccctgacagatacttcgagaa 522
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 551 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 610
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 611 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 654
>gb|CF482260.1|CF482260 POL1_5_H04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_5_H04_A002 5', mRNA sequence
Length = 765
Score = 351 bits (177), Expect = 1e-094
Identities = 444/533 (83%)
Strand = Plus / Plus
Query: 283 gacgagatctccggcgacttcgagagggccgtgatcctgtggacgctggacccagcggag 342
||||||||| |||| | |||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 233 gacgagatccacggcaagttcgagagaacggtgatcctgtggacgctggaccccgcggag 292
Query: 343 cgcgacgcggtgctggccaacgaggcggcgcggaagtggaagcccgggaaccgtgtgctc 402
| |||||||||||||| ||||||| |||| ||| ||| | ||||| ||| | |||
Sbjct: 293 agggacgcggtgctggcgaacgaggaggcgaagaaatggcaccccggcggccgcgcgctg 352
Query: 403 gtcgagatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttatcac 462
|| |||||||| ||| |||||||| |||||||| |||||||| ||| |||||| || |||
Sbjct: 353 gtggagatcgcgtgcgcgcgcacccccgcgcagctcttcgcggccaagcaggcgtaccac 412
Query: 463 gagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttccgc 522
|| || |||||||||||||| ||||| ||| |||| ||||||||||| || |||||||||
Sbjct: 413 gaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgc 472
Query: 523 aagctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaagg 582
||||| |||||||| ||||||||| | |||||||||||||| |||||||| |||||
Sbjct: 473 aagctgttggtgcctcttgtaagtgcataccgctatgatggcccagaggtgaacacgtct 532
Query: 583 ttggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgat 642
||||| || || ||||||||| | ||||||||||||||| || | ||||||||||||||
Sbjct: 533 ttggcccattctgaagccaaaattcttcatgagaagatcgataaaaaggcttacagtgac 592
Query: 643 gatgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaat 702
|| ||||||||||| || |||||||| |||||||| ||||||| |||| |||||||||
Sbjct: 593 gaggagatcatcaggattctcaccacacggagcaaagctcagctacttgcaacattcaat 652
Query: 703 cattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccaggac 762
| ||||| ||| ||||| || |||||||||||||||||| ||||||||| ||||
Sbjct: 653 aactacaaggatcagtttggtcatgcaatcaacaaggatctgaaagctgaccccaaggat 712
Query: 763 gagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccctgacag 815
|||| ||| ||| ||||| ||||||||||||||||||| |||||||||||
Sbjct: 713 gagttcctttcaacactgcgagcgatcatccggtgcttcacctgccctgacag 765
>gb|BG050036.1|BG050036 FM1_65_F09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 391
Score = 341 bits (172), Expect = 1e-091
Identities = 184/188 (97%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 259
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 319
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 320 cggcgcggaagtggcagcccgggaacagagtgctcgtcgagatcgcctgcacgcgcacct 379
Query: 428 ccgcgcag 435
||||||||
Sbjct: 380 ccgcgcag 387
Score = 210 bits (106), Expect = 2e-052
Identities = 127/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 22 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgac 81
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 141
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 142 tccatcctcggcca 155
>gb|BE357269.1|BE357269 DG1_148_D07.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 202
Score = 337 bits (170), Expect = 2e-090
Identities = 194/202 (96%)
Strand = Plus / Plus
Query: 622 catcacaaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacct 681
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 catcacaaggcttacagtgatgatgagatcatcataatcctcaccactaggagcaaacct 60
Query: 682 cagctgattgctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggat 741
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagctgcttgctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggat 120
Query: 742 ctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttc 801
||||||||||||||| |||| |||||||||| ||| |||||||| |||||||||||||||
Sbjct: 121 ctgaaggctgaccccaaggatgagtacctcaaaacactgcgggcaatcatccggtgcttc 180
Query: 802 agttgccctgacaggtactttg 823
|||||||| |||||||||||||
Sbjct: 181 agttgccccgacaggtactttg 202
>gb|CF760240.1|CF760240 DSAF1_57_C03.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_57_C03_A011 5', mRNA sequence
Length = 404
Score = 337 bits (170), Expect = 2e-090
Identities = 182/186 (97%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 278
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 338
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 339 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 398
Query: 428 ccgcgc 433
||||||
Sbjct: 399 ccgcgc 404
Score = 210 bits (106), Expect = 2e-052
Identities = 127/134 (94%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 41 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 100
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 101 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcgtc 160
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 161 tccatcctcggcca 174
>gb|BE362230.1|BE362230 DG1_85_D08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 387
Score = 333 bits (168), Expect = 2e-089
Identities = 183/188 (97%)
Strand = Plus / Plus
Query: 248 aggcctacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 307
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aggcccacggcgaggagctcctccgctccatcacggacgagatctccggcgacttcgaga 258
Query: 308 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gggccgtgatcctgtggacgctggacccagcggagcgcgacgcggtgctggccaacgagg 318
Query: 368 cggcgcggaagtggaagcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacct 427
|||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 319 cggcgcggaagtggcagccagggaaccgcgtgctcgtcgagatcgcctgcacgcgcacct 378
Query: 428 ccgcgcag 435
|||||||
Sbjct: 379 acgcgcag 386
Score = 218 bits (110), Expect = 1e-054
Identities = 128/134 (95%)
Strand = Plus / Plus
Query: 70 tcacattcaccgggaatggcaacgctcaaggtcccagccactgttcctcccgtcgccgat 129
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 21 tcacagtcaccgggaatggcgacgctcaaggtcccagccactgtccctcccgtcgccgat 80
Query: 130 gactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgaggcgctcatcatc 189
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gactgcgagcagctccgcaaggcattccaagggtggggcacgaacgaggcgctcatcatc 140
Query: 190 tccatcctcggcca 203
||||||||||||||
Sbjct: 141 tccatcctcggcca 154
>gb|CW336890.1|CW336890 104_836_11483843_148_36108_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11483843, DNA
sequence
Length = 644
Score = 327 bits (165), Expect = 1e-087
Identities = 171/173 (98%)
Strand = Plus / Minus
Query: 567 agaggtcaacacaaggttggcacactcagaagccaaactacttcatgagaagatccatca 626
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 644 agaggtcaacacaaggttggcacactcagaagccaaactactccatgagaagatccatca 585
Query: 627 caaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagct 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 caaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagct 525
Query: 687 gattgctacattcaatcattacaatgatgcatttggccaccgaatcaacaagg 739
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gcttgctacattcaatcattacaatgatgcatttggccaccgaatcaacaagg 472
>gb|AW744951.1|AW744951 LG1_385_B06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 327 bits (165), Expect = 1e-087
Identities = 420/505 (83%)
Strand = Plus / Plus
Query: 323 ggacgctggacccagcggagcgcgacgcggtgctggccaacgaggcggcgcggaagtgga 382
|||||||||||| |||||| | |||||||||||||| ||||||| |||| ||| |||
Sbjct: 9 ggacgctggacctcgcggagagggacgcggtgctggcgaacgaggaggcgaagaaatggc 68
Query: 383 agcccgggaaccgtgtgctcgtcgagatcgcctgcacgcgcacctccgcgcagatcttcg 442
| ||||| ||| | ||| || |||||||| ||| |||||||| |||||||| ||||||
Sbjct: 69 accccggcggccgcgcgctggtggagatcgcgtgcgcgcgcacccccgcgcagctcttcg 128
Query: 443 cgaccaggcaggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgc 502
|| ||| |||||| || ||||| || |||||||||||||| ||||| ||| |||| ||||
Sbjct: 129 cggccaagcaggcgtaccacgaccgcttcaagcgctcgctcgaggaggacgtcgcggcgc 188
Query: 503 acgtcactggggacttccgcaagctattggtgccacttgtaagtacttaccgctatgatg 562
||||||| || |||||||||||||| |||||||| ||||||||| | |||||||||||||
Sbjct: 189 acgtcaccggcgacttccgcaagctgttggtgcctcttgtaagtgcataccgctatgatg 248
Query: 563 gaccagaggtcaacacaaggttggcacactcagaagccaaactacttcatgagaagatcc 622
| |||||||| ||||| ||||| || || ||||||||| | |||||||||||||||
Sbjct: 249 gcccagaggtgaacacgtctttggcccattctgaagccaaaattcttcatgagaagatcg 308
Query: 623 atcacaaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctc 682
|| | |||||||||||||| || ||||||||||| || |||||||| |||||||| |||
Sbjct: 309 ataaaaaggcttacagtgacgaggagatcatcaggattctcaccacacggagcaaagctc 368
Query: 683 agctgattgctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggatc 742
|||| |||| ||||||||| | ||||| ||| ||||| || ||||||||||||||
Sbjct: 369 agctacttgcaacattcaataactacaaggatcagtttggtcatgcaatcaacaaggatc 428
Query: 743 tgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttca 802
|||| ||||||||| |||| |||| ||| ||| ||||| |||||||||||||||||||
Sbjct: 429 tgaaagctgaccccaaggatgagttcctttcaacactgcgagcgatcatccggtgcttca 488
Query: 803 gttgccctgacaggtactttgagaa 827
||||||||||| ||||| |||||
Sbjct: 489 cctgccctgacagatacttcgagaa 513
>gb|CF428809.1|CF428809 PH1_17_E03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_E03_A002 5', mRNA sequence
Length = 623
Score = 317 bits (160), Expect = 1e-084
Identities = 403/484 (83%)
Strand = Plus / Plus
Query: 283 gacgagatctccggcgacttcgagagggccgtgatcctgtggacgctggacccagcggag 342
||||||||| |||| | |||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 123 gacgagatccacggcaagttcgagagaacggtgatcctgtggacgctggaccccgcggag 182
Query: 343 cgcgacgcggtgctggccaacgaggcggcgcggaagtggaagcccgggaaccgtgtgctc 402
| |||||||||||||| ||||||| |||| ||| ||| | ||||| ||| | |||
Sbjct: 183 agggacgcggtgctggcgaacgaggaggcgaagaaatggcaccccggcggccgcgcgctg 242
Query: 403 gtcgagatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttatcac 462
|| |||||||| ||| |||||||| |||||||| |||||||| ||| |||||| || |||
Sbjct: 243 gtggagatcgcgtgcgcgcgcacccccgcgcagctcttcgcggccaagcaggcgtaccac 302
Query: 463 gagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttccgc 522
|| || |||||||||||||| ||||| ||| |||| ||||||||||| || |||||||||
Sbjct: 303 gaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgc 362
Query: 523 aagctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaagg 582
||||| |||||||| ||||||||| | |||||||||||||| |||||||| |||||
Sbjct: 363 aagctgttggtgcctcttgtaagtgcataccgctatgatggcccagaggtgaacacgtct 422
Query: 583 ttggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgat 642
||||| || || ||||||||| | ||||||||||||||| || | ||||||||||||||
Sbjct: 423 ttggcccattctgaagccaaaattcttcatgagaagatcgataaaaaggcttacagtgac 482
Query: 643 gatgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaat 702
|| ||||||||||| || |||||||| |||||||| ||||||| |||| |||||||||
Sbjct: 483 gaggagatcatcaggattctcaccacacggagcaaagctcagctacttgcaacattcaat 542
Query: 703 cattacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccaggac 762
| ||||| ||| ||||| || |||||||||||||||||| ||||||||| ||||
Sbjct: 543 aactacaaggatcagtttggtcatgcaatcaacaaggatctgaaagctgaccccaaggat 602
Query: 763 gagt 766
||||
Sbjct: 603 gagt 606
>gb|CN134246.1|CN134246 OX1_25_E03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_E03_A002 3', mRNA sequence
Length = 843
Score = 309 bits (156), Expect = 3e-082
Identities = 399/480 (83%)
Strand = Plus / Plus
Query: 348 cgcggtgctggccaacgaggcggcgcggaagtggaagcccgggaaccgtgtgctcgtcga 407
|||||||||||| ||||||| |||| ||| ||| | ||||| ||| | ||| || ||
Sbjct: 1 cgcggtgctggcgaacgaggaggcgaagaaatggcaccccggcggccgcgcgctggtgga 60
Query: 408 gatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttatcacgagcg 467
|||||| ||| |||||||| |||||||| |||||||| ||| |||||| || ||||| ||
Sbjct: 61 gatcgcgtgcgcgcgcacccccgcgcagctcttcgcggccaagcaggcgtaccacgaccg 120
Query: 468 gttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttccgcaagct 527
|||||||||||||| ||||| ||| |||| ||||||||||| || ||||||||||||||
Sbjct: 121 cttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgcaagct 180
Query: 528 attggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaaggttggc 587
|||||||| ||||||||| | |||||||||||||| |||||||| ||||| |||||
Sbjct: 181 gttggtgcctcttgtaagtgcataccgctatgatggcccagaggtgaacacgtctttggc 240
Query: 588 acactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgatgatga 647
|| || ||||||||| | ||||||||||||||| || | |||||||||||||| || ||
Sbjct: 241 ccattctgaagccaaaattcttcatgagaagatcgataaaaaggcttacagtgacgagga 300
Query: 648 gatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaatcatta 707
||||||||| || |||||||| |||||||| ||||||| |||| ||||||||| | ||
Sbjct: 301 gatcatcaggattctcaccacacggagcaaagctcagctacttgcaacattcaataacta 360
Query: 708 caatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccaggacgagta 767
||| ||| ||||| || |||||||||||||||||| ||||||||| |||| ||||
Sbjct: 361 caaggatcagtttggtcatgcaatcaacaaggatctgaaagctgaccccaaggatgagtt 420
Query: 768 cctcagaacgctgcgggcgatcatccggtgcttcagttgccctgacaggtactttgagaa 827
||| ||| ||||| ||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 421 cctttcaacactgcgagcgatcatccggtgcttcacctgccctgacagatacttcgagaa 480
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 509 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 568
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 569 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 612
>gb|CD225943.1|CD225943 CCC1_42_F11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_F11_A007 5', mRNA sequence
Length = 654
Score = 293 bits (148), Expect = 2e-077
Identities = 352/420 (83%)
Strand = Plus / Plus
Query: 283 gacgagatctccggcgacttcgagagggccgtgatcctgtggacgctggacccagcggag 342
||||||||| |||| | |||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 230 gacgagatccacggcaagttcgagagaacggtgatcctgtggacgctggaccccgcggag 289
Query: 343 cgcgacgcggtgctggccaacgaggcggcgcggaagtggaagcccgggaaccgtgtgctc 402
| |||||||||||||| ||||||| |||| ||| ||| | ||||| ||| | |||
Sbjct: 290 agggacgcggtgctggcgaacgaggaggcgaagaaatggcaccccggcggccgcgcgctg 349
Query: 403 gtcgagatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttatcac 462
|| |||||||| ||| |||||||| |||||||| |||||||| ||| |||||| || |||
Sbjct: 350 gtggagatcgcgtgcgcgcgcacccccgcgcagctcttcgcggccaagcaggcgtaccac 409
Query: 463 gagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttccgc 522
|| || |||||||||||||| ||||| ||| |||| ||||||||||| || |||||||||
Sbjct: 410 gaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgc 469
Query: 523 aagctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaagg 582
||||| |||||||| ||||||||| | |||||||||||||| |||||||| |||||
Sbjct: 470 aagctgttggtgcctcttgtaagtgcataccgctatgatggcccagaggtgaacacgtct 529
Query: 583 ttggcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgat 642
||||| || || ||||||||| | ||||||||||||||| || | ||||||||||||||
Sbjct: 530 ttggcccattctgaagccaaaattcttcatgagaagatcgataaaaaggcttacagtgac 589
Query: 643 gatgagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaat 702
|| ||||||||||| || |||||||| |||||||| ||||||| |||| |||||||||
Sbjct: 590 gaggagatcatcaggattctcaccacacggagcaaagctcagctacttgcaacattcaat 649
Score = 46.1 bits (23), Expect = 0.008
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 119 ccgtcgccgatgactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgagg 178
|||||||||| ||| ||| ||||| | ||| || ||| |||| |||||||| ||||||
Sbjct: 66 ccgtcgccgaggacgccgagcagctccacaaggccttcgaaggttggggcaccaacgaga 125
Query: 179 cgctcatcatctccatcct 197
||| ||||||||||||||
Sbjct: 126 agctgatcatctccatcct 144
>gb|CN131364.1|CN131364 RHOH1_47_B12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_B12_A002 5', mRNA sequence
Length = 835
Score = 291 bits (147), Expect = 8e-077
Identities = 342/407 (84%)
Strand = Plus / Plus
Query: 421 cgcacctccgcgcagatcttcgcgaccaggcaggcttatcacgagcggttcaagcgctcg 480
|||||| |||||||| |||||||| ||| |||||| || ||||| || ||||||||||||
Sbjct: 243 cgcacccccgcgcagctcttcgcggccaagcaggcgtaccacgaccgcttcaagcgctcg 302
Query: 481 cttgaggaagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccactt 540
|| ||||| ||| |||| ||||||||||| || |||||||||||||| |||||||| |||
Sbjct: 303 ctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgcaagctgttggtgcctctt 362
Query: 541 gtaagtacttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagcc 600
|||||| | |||||||||||||| |||||||| ||||| ||||| || || ||||||
Sbjct: 363 gtaagtgcataccgctatgatggcccagaggtgaacacgtctttggcccattctgaagcc 422
Query: 601 aaactacttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatc 660
||| | ||||||||||||||| || | |||||||||||||| || ||||||||||| ||
Sbjct: 423 aaaattcttcatgagaagatcgataaaaaggcttacagtgacgaggagatcatcaggatt 482
Query: 661 ctcaccactaggagcaaacctcagctgattgctacattcaatcattacaatgatgcattt 720
|||||||| |||||||| ||||||| |||| ||||||||| | ||||| ||| |||
Sbjct: 483 ctcaccacacggagcaaagctcagctacttgcaacattcaataactacaaggatcagttt 542
Query: 721 ggccaccgaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctg 780
|| || |||||||||||||||||| ||||||||| |||| |||| ||| ||| |||
Sbjct: 543 ggtcatgcaatcaacaaggatctgaaagctgaccccaaggatgagttcctttcaacactg 602
Query: 781 cgggcgatcatccggtgcttcagttgccctgacaggtactttgagaa 827
|| ||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 603 cgagcgatcatccggtgcttcacctgccctgacagatacttcgagaa 649
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 678 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 737
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 738 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 781
Score = 46.1 bits (23), Expect = 0.008
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 119 ccgtcgccgatgactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgagg 178
|||||||||| ||| ||| ||||| | ||| || ||| |||| |||||||| ||||||
Sbjct: 157 ccgtcgccgaggacgccgagcagctccacaaggccttcgaaggttggggcaccaacgaga 216
Query: 179 cgctcatcatctccatcct 197
||| ||||||||||||||
Sbjct: 217 agctgatcatctccatcct 235
>gb|BE358601.1|BE358601 DG1_30_E11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 563
Score = 276 bits (139), Expect = 5e-072
Identities = 328/391 (83%)
Strand = Plus / Plus
Query: 406 gagatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttatcacgag 465
|||||||| ||| |||||||| |||||||| |||||||| ||| |||||| || |||||
Sbjct: 173 gagatcgcgtgcgcgcgcacccccgcgcagctcttcgcggccaagcaggcgtaccacgac 232
Query: 466 cggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttccgcaag 525
|| |||||||||||||| ||||| ||| |||| ||||||||||| || ||||||||||||
Sbjct: 233 cgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgcaag 292
Query: 526 ctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaaggttg 585
|| |||||||| ||||||||| | |||||||||||||| |||||||| ||||| |||
Sbjct: 293 ctgttggtgcctcttgtaagtgcataccgctatgatggcccagaggtgaacacgtctttg 352
Query: 586 gcacactcagaagccaaactacttcatgagaagatccatcacaaggcttacagtgatgat 645
|| || || ||||||||| | ||||||||||||||| || | |||||||||||||| ||
Sbjct: 353 gcccattctgaagccaaaattcttcatgagaagatcgataaaaaggcttacagtgacgag 412
Query: 646 gagatcatcagaatcctcaccactaggagcaaacctcagctgattgctacattcaatcat 705
||||||||||| || |||||||| |||||||| ||||||| |||| ||||||||| |
Sbjct: 413 gagatcatcaggattctcaccacacggagcaaagctcagctacttgcaacattcaataac 472
Query: 706 tacaatgatgcatttggccaccgaatcaacaaggatctgaaggctgacccccaggacgag 765
||||| ||| ||||| || |||||||||||||||||| ||||||||| |||| |||
Sbjct: 473 tacaaggatcagtttggtcatgcaatcaacaaggatctgaaagctgaccccaaggatgag 532
Query: 766 tacctcagaacgctgcgggcgatcatccggt 796
| ||| ||| ||||| |||||||||||||
Sbjct: 533 ttcctttcaacactgcgagcgatcatccggt 563
Score = 46.1 bits (23), Expect = 0.008
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 119 ccgtcgccgatgactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgagg 178
|||||||||| ||| ||| ||||| | ||| || ||| |||| |||||||| ||||||
Sbjct: 57 ccgtcgccgaggacgccgagcagctccacaaggccttcgaaggttggggcaccaacgaga 116
Query: 179 cgctcatcatctccatcct 197
||| ||||||||||||||
Sbjct: 117 agctgatcatctccatcct 135
>gb|CN129931.1|CN129931 RHOH1_38_F11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_F11_A002 3', mRNA sequence
Length = 721
Score = 266 bits (134), Expect = 5e-069
Identities = 317/378 (83%)
Strand = Plus / Plus
Query: 450 gcaggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcac 509
|||||| || ||||| || |||||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 6 gcaggcgtaccacgaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcac 65
Query: 510 tggggacttccgcaagctattggtgccacttgtaagtacttaccgctatgatggaccaga 569
|| |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||
Sbjct: 66 cggcgacttccgcaagctgttggtgcctcttgtaagtgcataccgctatgatggcccaga 125
Query: 570 ggtcaacacaaggttggcacactcagaagccaaactacttcatgagaagatccatcacaa 629
||| ||||| ||||| || || ||||||||| | ||||||||||||||| || | ||
Sbjct: 126 ggtgaacacgtctttggcccattctgaagccaaaattcttcatgagaagatcgataaaaa 185
Query: 630 ggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgat 689
|||||||||||| || ||||||||||| || |||||||| |||||||| ||||||| |
Sbjct: 186 ggcttacagtgacgaggagatcatcaggattctcaccacacggagcaaagctcagctact 245
Query: 690 tgctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggc 749
||| ||||||||| | ||||| ||| ||||| || |||||||||||||||||| ||
Sbjct: 246 tgcaacattcaataactacaaggatcagtttggtcatgcaatcaacaaggatctgaaagc 305
Query: 750 tgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccc 809
||||||| |||| |||| ||| ||| ||||| ||||||||||||||||||| |||||
Sbjct: 306 tgaccccaaggatgagttcctttcaacactgcgagcgatcatccggtgcttcacctgccc 365
Query: 810 tgacaggtactttgagaa 827
|||||| ||||| |||||
Sbjct: 366 tgacagatacttcgagaa 383
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 412 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 471
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 472 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 515
>gb|CN146586.1|CN146586 WOUND1_42_E08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_E08_A002 3', mRNA sequence
Length = 725
Score = 266 bits (134), Expect = 5e-069
Identities = 317/378 (83%)
Strand = Plus / Plus
Query: 450 gcaggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcac 509
|||||| || ||||| || |||||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 8 gcaggcgtaccacgaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcac 67
Query: 510 tggggacttccgcaagctattggtgccacttgtaagtacttaccgctatgatggaccaga 569
|| |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||
Sbjct: 68 cggcgacttccgcaagctgttggtgcctcttgtaagtgcataccgctatgatggcccaga 127
Query: 570 ggtcaacacaaggttggcacactcagaagccaaactacttcatgagaagatccatcacaa 629
||| ||||| ||||| || || ||||||||| | ||||||||||||||| || | ||
Sbjct: 128 ggtgaacacgtctttggcccattctgaagccaaaattcttcatgagaagatcgataaaaa 187
Query: 630 ggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgat 689
|||||||||||| || ||||||||||| || |||||||| |||||||| ||||||| |
Sbjct: 188 ggcttacagtgacgaggagatcatcaggattctcaccacacggagcaaagctcagctact 247
Query: 690 tgctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggc 749
||| ||||||||| | ||||| ||| ||||| || |||||||||||||||||| ||
Sbjct: 248 tgcaacattcaataactacaaggatcagtttggtcatgcaatcaacaaggatctgaaagc 307
Query: 750 tgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccc 809
||||||| |||| |||| ||| ||| ||||| ||||||||||||||||||| |||||
Sbjct: 308 tgaccccaaggatgagttcctttcaacactgcgagcgatcatccggtgcttcacctgccc 367
Query: 810 tgacaggtactttgagaa 827
|||||| ||||| |||||
Sbjct: 368 tgacagatacttcgagaa 385
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 414 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 473
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 474 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 517
>gb|CX609506.1|CX609506 ANR1_13_D03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_13_D03_A002 3', mRNA sequence
Length = 780
Score = 266 bits (134), Expect = 5e-069
Identities = 317/378 (83%)
Strand = Plus / Plus
Query: 450 gcaggcttatcacgagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcac 509
|||||| || ||||| || |||||||||||||| ||||| ||| |||| |||||||||||
Sbjct: 6 gcaggcgtaccacgaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcac 65
Query: 510 tggggacttccgcaagctattggtgccacttgtaagtacttaccgctatgatggaccaga 569
|| |||||||||||||| |||||||| ||||||||| | |||||||||||||| |||||
Sbjct: 66 cggcgacttccgcaagctgttggtgcctcttgtaagtgcataccgctatgatggcccaga 125
Query: 570 ggtcaacacaaggttggcacactcagaagccaaactacttcatgagaagatccatcacaa 629
||| ||||| ||||| || || ||||||||| | ||||||||||||||| || | ||
Sbjct: 126 ggtgaacacgtctttggcccattctgaagccaaaattcttcatgagaagatcgataaaaa 185
Query: 630 ggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaacctcagctgat 689
|||||||||||| || ||||||||||| || |||||||| |||||||| ||||||| |
Sbjct: 186 ggcttacagtgacgaggagatcatcaggattctcaccacacggagcaaagctcagctact 245
Query: 690 tgctacattcaatcattacaatgatgcatttggccaccgaatcaacaaggatctgaaggc 749
||| ||||||||| | ||||| ||| ||||| || |||||||||||||||||| ||
Sbjct: 246 tgcaacattcaataactacaaggatcagtttggtcatgcaatcaacaaggatctgaaagc 305
Query: 750 tgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtgcttcagttgccc 809
||||||| |||| |||| ||| ||| ||||| ||||||||||||||||||| |||||
Sbjct: 306 tgaccccaaggatgagttcctttcaacactgcgagcgatcatccggtgcttcacctgccc 365
Query: 810 tgacaggtactttgagaa 827
|||||| ||||| |||||
Sbjct: 366 tgacagatacttcgagaa 383
Score = 54.0 bits (27), Expect = 3e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 877 accagggtcatcaccacccgcgctgaggtggacctcaaactgattaaggaggcgtaccag 936
||||||||||| || || ||||| ||||| ||||| || || || ||| || ||||||
Sbjct: 433 accagggtcataactactcgcgccgaggtcgacctgaagctaataggggaagcttaccag 492
Query: 937 aagaggaacagcgtgccgctgga 959
||||||||||| |||||||||||
Sbjct: 493 aagaggaacagtgtgccgctgga 515
>gb|BG049798.1|BG049798 FM1_65_F09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 507
Score = 250 bits (126), Expect = 3e-064
Identities = 164/176 (93%), Gaps = 3/176 (1%)
Strand = Plus / Plus
Query: 901 gaggtggacctcaaactgattaaggaggcgtaccagaagaggaacagcgtgccgctggag 960
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gaggtggacctgaaactgattaaggaggcgtaccagaagaggaacagcgtgcccctggag 60
Query: 961 cgggccgtcgcgggggacacctccggcgactacgagagcatgctcctcgcgctcctgggg 1020
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 cgcgccgtcgctggggacacctccggcgactacgagagcatgctcctcgcgctccttggg 120
Query: 1021 caggagtgatgagccgtactggtgcgctggtgcctttctgaccggcgccgtggtgt 1076
|||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||
Sbjct: 121 caggagtgatgagccg---tggtgcactgttgcgtctctgaccggcgccgtggtgt 173
Score = 73.8 bits (37), Expect = 4e-011
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1171 cagtggtgataaataagttactgtgctttcgacgaatgaac 1211
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 267 cagtggtgataaataagttactgtgttttcgacgaatgaac 307
Score = 40.1 bits (20), Expect = 0.49
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 1091 aataaacctgat-tgcctagctgtacgtgaggctgtttcttcgg 1133
|||||||||| | ||||||||||||| ||||| ||||||||||
Sbjct: 193 aataaacctggtatgcctagctgtacctgaggtggtttcttcgg 236
>gb|CD221439.1|CD221439 CCC1_54_G12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_G12_A007 5', mRNA sequence
Length = 603
Score = 236 bits (119), Expect = 4e-060
Identities = 284/339 (83%)
Strand = Plus / Plus
Query: 283 gacgagatctccggcgacttcgagagggccgtgatcctgtggacgctggacccagcggag 342
||||||||| |||| | |||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 258 gacgagatccacggcaagttcgagagaacggtgatcctgtggacgctggaccccgcggag 317
Query: 343 cgcgacgcggtgctggccaacgaggcggcgcggaagtggaagcccgggaaccgtgtgctc 402
| |||||||||||||| ||||||| |||| ||| ||| | ||||| ||| | |||
Sbjct: 318 agggacgcggtgctggcgaacgaggaggcgaagaaatggcaccccggcggccgcgcgctg 377
Query: 403 gtcgagatcgcctgcacgcgcacctccgcgcagatcttcgcgaccaggcaggcttatcac 462
|| |||||||| ||| |||||||| |||||||| |||||||| ||| |||||| || |||
Sbjct: 378 gtggagatcgcgtgcgcgcgcacccccgcgcagctcttcgcggccaagcaggcgtaccac 437
Query: 463 gagcggttcaagcgctcgcttgaggaagacatcgctgcgcacgtcactggggacttccgc 522
|| || |||||||||||||| ||||| ||| |||| ||||||||||| || |||||||||
Sbjct: 438 gaccgcttcaagcgctcgctcgaggaggacgtcgcggcgcacgtcaccggcgacttccgc 497
Query: 523 aagctattggtgccacttgtaagtacttaccgctatgatggaccagaggtcaacacaagg 582
||||| |||||||| ||||||||| | |||||||||||||| |||||||| |||||
Sbjct: 498 aagctgttggtgcctcttgtaagtgcataccgctatgatggcccagaggtgaacacgtct 557
Query: 583 ttggcacactcagaagccaaactacttcatgagaagatc 621
||||| || || ||||||||| | |||||||||||||||
Sbjct: 558 ttggcccattctgaagccaaaattcttcatgagaagatc 596
Score = 46.1 bits (23), Expect = 0.008
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 119 ccgtcgccgatgactgcgaccagctgcgcaaagcattccaagggtggggcacgaacgagg 178
|||||||||| ||| ||| ||||| | ||| || ||| |||| |||||||| ||||||
Sbjct: 94 ccgtcgccgaggacgccgagcagctccacaaggccttcgaaggttggggcaccaacgaga 153
Query: 179 cgctcatcatctccatcct 197
||| ||||||||||||||
Sbjct: 154 agctgatcatctccatcct 172
>gb|CX611887.1|CX611887 ANR1_27_G01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_G01_A002 3', mRNA sequence
Length = 681
Score = 236 bits (119), Expect = 4e-060
Identities = 287/343 (83%)
Strand = Plus / Plus
Query: 485 aggaagacatcgctgcgcacgtcactggggacttccgcaagctattggtgccacttgtaa 544
|||| ||| |||| ||||||||||| || |||||||||||||| |||||||| |||||||
Sbjct: 1 aggaggacgtcgcggcgcacgtcaccggcgacttccgcaagctgttggtgcctcttgtaa 60
Query: 545 gtacttaccgctatgatggaccagaggtcaacacaaggttggcacactcagaagccaaac 604
|| | |||||||||||||| |||||||| ||||| ||||| || || |||||||||
Sbjct: 61 gtgcataccgctatgatggcccagaggtgaacacgtctttggcccattctgaagccaaaa 120
Query: 605 tacttcatgagaagatccatcacaaggcttacagtgatgatgagatcatcagaatcctca 664
| ||||||||||||||| || | |||||||||||||| || ||||||||||| || ||||
Sbjct: 121 ttcttcatgagaagatcgataaaaaggcttacagtgacgaggagatcatcaggattctca 180
Query: 665 ccactaggagcaaacctcagctgattgctacattcaatcattacaatgatgcatttggcc 724
|||| |||||||| ||||||| |||| ||||||||| | ||||| ||| ||||| |
Sbjct: 181 ccacacggagcaaagctcagctacttgcaacattcaataactacaaggatcagtttggtc 240
Query: 725 accgaatcaacaaggatctgaaggctgacccccaggacgagtacctcagaacgctgcggg 784
| |||||||||||||||||| ||||||||| |||| |||| ||| ||| ||||| |
Sbjct: 241 atgcaatcaacaaggatctgaaagctgaccccaaggatgagttcctttcaacactgcgag 300
Query: 785 cgatcatccggtgcttcagttgccctgacaggtactttgagaa 827
|||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 301 cgatcatccggtgcttcacctgccctgacagatacttcgagaa 343
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 372 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 431
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 432 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 475
>gb|CN131290.1|CN131290 RHOH1_47_B12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_B12_A002 3', mRNA sequence
Length = 690
Score = 232 bits (117), Expect = 6e-059
Identities = 276/329 (83%)
Strand = Plus / Plus
Query: 499 gcgcacgtcactggggacttccgcaagctattggtgccacttgtaagtacttaccgctat 558
||||||||||| || |||||||||||||| |||||||| ||||||||| | |||||||||
Sbjct: 1 gcgcacgtcaccggcgacttccgcaagctgttggtgcctcttgtaagtgcataccgctat 60
Query: 559 gatggaccagaggtcaacacaaggttggcacactcagaagccaaactacttcatgagaag 618
||||| |||||||| ||||| ||||| || || ||||||||| | ||||||||||||
Sbjct: 61 gatggcccagaggtgaacacgtctttggcccattctgaagccaaaattcttcatgagaag 120
Query: 619 atccatcacaaggcttacagtgatgatgagatcatcagaatcctcaccactaggagcaaa 678
||| || | |||||||||||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 121 atcgataaaaaggcttacagtgacgaggagatcatcaggattctcaccacacggagcaaa 180
Query: 679 cctcagctgattgctacattcaatcattacaatgatgcatttggccaccgaatcaacaag 738
||||||| |||| ||||||||| | ||||| ||| ||||| || ||||||||||
Sbjct: 181 gctcagctacttgcaacattcaataactacaaggatcagtttggtcatgcaatcaacaag 240
Query: 739 gatctgaaggctgacccccaggacgagtacctcagaacgctgcgggcgatcatccggtgc 798
|||||||| ||||||||| |||| |||| ||| ||| ||||| |||||||||||||||
Sbjct: 241 gatctgaaagctgaccccaaggatgagttcctttcaacactgcgagcgatcatccggtgc 300
Query: 799 ttcagttgccctgacaggtactttgagaa 827
|||| ||||||||||| ||||| |||||
Sbjct: 301 ttcacctgccctgacagatacttcgagaa 329
Score = 56.0 bits (28), Expect = 8e-006
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 856 ggcacagatgagaactccctgaccagggtcatcaccacccgcgctgaggtggacctcaaa 915
|||||||||||| | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 358 ggcacagatgaggatgctctcaccagggtcataactactcgcgccgaggtcgacctgaag 417
Query: 916 ctgattaaggaggcgtaccagaagaggaacagcgtgccgctgga 959
|| || ||| || ||||||||||||||||| |||||||||||
Sbjct: 418 ctaataggggaagcttaccagaagaggaacagtgtgccgctgga 461
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 294,350
Number of Sequences: 832831
Number of extensions: 294350
Number of successful extensions: 83910
Number of sequences better than 0.5: 143
Number of HSP's better than 0.5 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83362
Number of HSP's gapped (non-prelim): 400
length of query: 1277
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1257
effective length of database: 474,703,049
effective search space: 596701732593
effective search space used: 596701732593
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)