BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276562.2.1
(1286 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN129755.1|CN129755 RHOH1_37_E12.b1_A002 Acid- and alkal... 1150 0.0
gb|CF482260.1|CF482260 POL1_5_H04.g1_A002 Pollen Sorghum bi... 1120 0.0
gb|CN134246.1|CN134246 OX1_25_E03.b1_A002 Oxidatively-stres... 1098 0.0
gb|CD225943.1|CD225943 CCC1_42_F11.g1_A007 Callus culture/c... 946 0.0
gb|CX609506.1|CX609506 ANR1_13_D03.b1_A002 Anaerobic roots ... 942 0.0
gb|CN129931.1|CN129931 RHOH1_38_F11.b1_A002 Acid- and alkal... 936 0.0
gb|CN146586.1|CN146586 WOUND1_42_E08.b1_A002 Wounded leaves... 928 0.0
gb|CF428809.1|CF428809 PH1_17_E03.g1_A002 Phosphorous-defic... 908 0.0
gb|CX611887.1|CX611887 ANR1_27_G01.b1_A002 Anaerobic roots ... 898 0.0
gb|CN131290.1|CN131290 RHOH1_47_B12.b1_A002 Acid- and alkal... 894 0.0
gb|BE358403.1|BE358403 DG1_29_B05.g1_A002 Dark Grown 1 (DG1... 890 0.0
gb|AW565401.1|AW565401 LG1_343_H02.g1_A002 Light Grown 1 (L... 884 0.0
gb|BE358636.1|BE358636 DG1_30_E11.g1_A002 Dark Grown 1 (DG1... 868 0.0
gb|AW744951.1|AW744951 LG1_385_B06.b1_A002 Light Grown 1 (L... 860 0.0
gb|BG357510.1|BG357510 OV2_30_G08.g1_A002 Ovary 2 (OV2) Sor... 846 0.0
gb|CF428698.1|CF428698 PH1_17_E03.b1_A002 Phosphorous-defic... 844 0.0
gb|CD235068.1|CD235068 SS1_21_C11.b1_A012 Salt-stressed see... 837 0.0
gb|CD221439.1|CD221439 CCC1_54_G12.g1_A007 Callus culture/c... 833 0.0
gb|CD225918.1|CD225918 CCC1_42_F11.b1_A007 Callus culture/c... 823 0.0
gb|CN131364.1|CN131364 RHOH1_47_B12.g1_A002 Acid- and alkal... 819 0.0
gb|CD235196.1|CD235196 SS1_21_C11.g1_A012 Salt-stressed see... 801 0.0
gb|AW678166.1|AW678166 WS1_13_H01.g1_A002 Water-stressed 1 ... 797 0.0
gb|BG053007.1|BG053007 RHIZ2_16_C07.g1_A003 Rhizome2 (RHIZ2... 797 0.0
gb|BG356749.1|BG356749 OV2_9_E04.g1_A002 Ovary 2 (OV2) Sorg... 789 0.0
gb|CD221496.1|CD221496 CCC1_55_B01.b1_A007 Callus culture/c... 783 0.0
gb|CF771952.1|CF771952 DSBF1_26_F03.g9_A010 Drought-stresse... 777 0.0
gb|CN130018.1|CN130018 RHOH1_38_F11.g1_A002 Acid- and alkal... 775 0.0
gb|CF756992.1|CF756992 DSAF1_12_C05.g1_A011 Drought-stresse... 763 0.0
gb|CF482175.1|CF482175 POL1_5_H04.b1_A002 Pollen Sorghum bi... 751 0.0
gb|BG412581.1|BG412581 OV2_36_B12.g1_A002 Ovary 2 (OV2) Sor... 745 0.0
gb|BG103881.1|BG103881 RHIZ2_37_H09.b1_A003 Rhizome2 (RHIZ2... 733 0.0
gb|BG048173.1|BG048173 OV1_28_F01.g1_A002 Ovary 1 (OV1) Sor... 716 0.0
gb|AW677502.1|AW677502 DG1_8_C01.b1_A002 Dark Grown 1 (DG1)... 696 0.0
gb|BG053082.1|BG053082 RHIZ2_16_D07.b1_A003 Rhizome2 (RHIZ2... 660 0.0
gb|AW678084.1|AW678084 WS1_13_H01.b1_A002 Water-stressed 1 ... 656 0.0
gb|AW287406.2|AW287406 LG1_303_E07.b1_A002 Light Grown 1 (L... 652 0.0
gb|AW744998.1|AW744998 LG1_385_B06.g1_A002 Light Grown 1 (L... 652 0.0
gb|CN134327.1|CN134327 OX1_25_E03.g1_A002 Oxidatively-stres... 652 0.0
gb|BG053072.1|BG053072 RHIZ2_16_C07.b1_A003 Rhizome2 (RHIZ2... 648 0.0
gb|BG103339.1|BG103339 RHIZ2_19_A03.b1_A003 Rhizome2 (RHIZ2... 648 0.0
gb|BG357829.1|BG357829 OV2_30_G08.b1_A002 Ovary 2 (OV2) Sor... 648 0.0
gb|CF761539.1|CF761539 DSAF1_77_E05.b1_A011 Drought-stresse... 632 e-179
gb|BG103167.1|BG103167 RHIZ2_19_A03.g1_A003 Rhizome2 (RHIZ2... 624 e-177
gb|CX623174.1|CX623174 GABR1_68_D09.b1_A002 GA- or brassino... 595 e-168
gb|BG103552.1|BG103552 RHIZ2_37_H09.g1_A003 Rhizome2 (RHIZ2... 591 e-167
gb|BG047850.1|BG047850 OV1_28_F01.b1_A002 Ovary 1 (OV1) Sor... 587 e-165
gb|AW677613.1|AW677613 DG1_8_C01.g1_A002 Dark Grown 1 (DG1)... 585 e-165
gb|BE358601.1|BE358601 DG1_30_E11.b1_A002 Dark Grown 1 (DG1... 573 e-161
gb|BG053093.1|BG053093 RHIZ2_16_E07.b1_A003 Rhizome2 (RHIZ2... 567 e-160
gb|CW224969.1|CW224969 104_662_11204102_148_37205_057 Sorgh... 565 e-159
gb|CW429932.1|CW429932 fsbb001f143g20f0 Sorghum methylation... 565 e-159
gb|BG412892.1|BG412892 OV2_36_B12.b1_A002 Ovary 2 (OV2) Sor... 563 e-158
gb|CX611976.1|CX611976 ANR1_27_G01.g1_A002 Anaerobic roots ... 555 e-156
gb|CW318108.1|CW318108 104_810_11473774_116_35874_093 Sorgh... 549 e-154
gb|BF655741.1|BF655741 FM1_48_D12.b1_A003 Floral-Induced Me... 547 e-154
gb|CN129835.1|CN129835 RHOH1_37_E12.g1_A002 Acid- and alkal... 547 e-154
gb|CW299565.1|CW299565 104_782_11463186_116_36235_069 Sorgh... 533 e-149
gb|CW158532.1|CW158532 104_564_11148871_116_36395_026 Sorgh... 531 e-149
gb|CF771949.1|CF771949 DSBF1_26_E11.g9_A010 Drought-stresse... 529 e-148
gb|AW282669.1|AW282669 LG1_303_E07.g1_A002 Light Grown 1 (L... 509 e-142
gb|BG357066.1|BG357066 OV2_9_E04.b1_A002 Ovary 2 (OV2) Sorg... 509 e-142
gb|CF427447.1|CF427447 PH1_1_B02.g1_A002 Phosphorous-defici... 505 e-141
gb|BE360652.1|BE360652 DG1_66_F04.b2_A002 Dark Grown 1 (DG1... 448 e-124
gb|CN146642.1|CN146642 WOUND1_42_E08.g1_A002 Wounded leaves... 432 e-119
gb|CX609593.1|CX609593 ANR1_13_D03.g1_A002 Anaerobic roots ... 430 e-118
gb|AW678952.1|AW678952 WS1_21_B11.b1_A002 Water-stressed 1 ... 406 e-111
gb|CX617404.1|CX617404 GABR1_33_C04.g1_A002 GA- or brassino... 404 e-111
gb|CF484980.1|CF484980 POL1_28_E11.g1_A002 Pollen Sorghum b... 396 e-108
gb|BE360723.1|BE360723 DG1_66_F04.g2_A002 Dark Grown 1 (DG1... 365 7e-099
gb|BF704822.1|BF704822 FM1_52_A02.b1_A003 Floral-Induced Me... 335 6e-090
gb|CF480438.1|CF480438 POL1_65_F08.g1_A002 Pollen Sorghum b... 329 4e-088
gb|BE356543.1|BE356543 DG1_126_B11.b1_A002 Dark Grown 1 (DG... 317 1e-084
gb|CW204823.1|CW204823 104_633_11186753_148_36926_079 Sorgh... 315 6e-084
gb|BE593171.1|BE593171 WS1_98_D07.g1_A002 Water-stressed 1 ... 311 9e-083
gb|BE593481.1|BE593481 WS1_98_D07.b1_A002 Water-stressed 1 ... 311 9e-083
gb|CW050265.1|CW050265 104_290_10514553_114_30195 Sorghum m... 305 5e-081
gb|CW429933.1|CW429933 fsbb001f143g20k0 Sorghum methylation... 301 8e-080
gb|BG948519.1|BG948519 IP1_10_F10.b1_A002 Immature pannicle... 297 1e-078
gb|BG488384.1|BG488384 RHIZ2_63_A05.b1_A003 Rhizome2 (RHIZ2... 289 3e-076
gb|CW427821.1|CW427821 fsbb001f140a02k0 Sorghum methylation... 281 8e-074
gb|CF427467.1|CF427467 PH1_1_H01.g1_A002 Phosphorous-defici... 278 1e-072
gb|CF760999.1|CF760999 DSAF1_69_F12.b1_A011 Drought-stresse... 272 8e-071
gb|CW093734.1|CW093734 104_457_10999949_116_37477_031 Sorgh... 268 1e-069
gb|BZ695603.1|BZ695603 SP__Ba0066B13.r SP__Ba Sorghum propi... 260 3e-067
gb|BG102316.1|BG102316 RHIZ2_24_G08.b1_A003 Rhizome2 (RHIZ2... 256 4e-066
gb|CW790150.1|CW790150 SP__Ba0066B13.r SP__Ba Sorghum propi... 248 1e-063
gb|CW501004.1|CW501004 fsbb001f296j13f0 Sorghum methylation... 244 2e-062
gb|CX623264.1|CX623264 GABR1_68_D09.g1_A002 GA- or brassino... 234 2e-059
gb|BE362230.1|BE362230 DG1_85_D08.b1_A002 Dark Grown 1 (DG1... 226 4e-057
gb|BG050036.1|BG050036 FM1_65_F09.b1_A003 Floral-Induced Me... 226 4e-057
gb|CF760240.1|CF760240 DSAF1_57_C03.b1_A011 Drought-stresse... 218 1e-054
gb|AW922911.1|AW922911 DG1_47_B07.b1_A002 Dark Grown 1 (DG1... 208 9e-052
gb|BQ656174.1|BQ656174 pRC1204 Sorghum halepense rhizome cD... 194 1e-047
gb|CF427336.1|CF427336 PH1_1_B02.b1_A002 Phosphorous-defici... 188 9e-046
gb|CW299566.1|CW299566 104_782_11463186_148_36236_069 Sorgh... 178 8e-043
gb|CD430695.1|CD430695 ETH1_20_E07.g1_A002 Ethylene-treated... 157 3e-036
gb|CW336889.1|CW336889 104_836_11483843_116_36112_042 Sorgh... 149 7e-034
gb|BE356595.1|BE356595 DG1_126_B11.g1_A002 Dark Grown 1 (DG... 149 7e-034
gb|AC169375.3| Sorghum bicolor clone SB_BBc0020O07, WORKING... 145 1e-032
gb|BG948209.1|BG948209 IP1_10_F10.g1_A002 Immature pannicle... 141 2e-031
gb|CW093735.1|CW093735 104_457_10999949_148_37478_031 Sorgh... 135 1e-029
gb|CW025808.1|CW025808 104_227_10488407_116_30503 Sorghum m... 129 7e-028
gb|CW289445.1|CW289445 104_768_11412482_116_35546_009 Sorgh... 129 7e-028
gb|CW441932.1|CW441932 fsbb001f161f07k0 Sorghum methylation... 129 7e-028
gb|CW441931.1|CW441931 fsbb001f161f07f0 Sorghum methylation... 121 2e-025
gb|CW336890.1|CW336890 104_836_11483843_148_36108_042 Sorgh... 119 7e-025
gb|BE357348.1|BE357348 DG1_148_C07.g1_A002 Dark Grown 1 (DG... 119 7e-025
gb|BF656588.1|BF656588 FM1_52_A02.g1_A003 Floral-Induced Me... 117 3e-024
gb|AW282656.2|AW282656 LG1_303_G11.g1_A002 Light Grown 1 (L... 113 4e-023
gb|AW922927.1|AW922927 DG1_47_B07.g1_A002 Dark Grown 1 (DG1... 113 4e-023
gb|CW025807.1|CW025807 104_227_10488407_114_30507 Sorghum m... 109 6e-022
gb|CW289446.1|CW289446 104_768_11412482_148_35550_009 Sorgh... 109 6e-022
gb|BG102098.1|BG102098 RHIZ2_24_G08.g1_A003 Rhizome2 (RHIZ2... 103 4e-020
gb|CD430647.1|CD430647 ETH1_20_E07.b1_A002 Ethylene-treated... 101 2e-019
gb|CF480354.1|CF480354 POL1_65_F08.b1_A002 Pollen Sorghum b... 101 2e-019
gb|BE357269.1|BE357269 DG1_148_D07.b1_A002 Dark Grown 1 (DG... 98 2e-018
gb|BE358573.1|BE358573 DG1_31_E04.g1_A002 Dark Grown 1 (DG1... 98 2e-018
gb|CF484899.1|CF484899 POL1_28_E11.b1_A002 Pollen Sorghum b... 96 1e-017
gb|BE358528.1|BE358528 DG1_31_E04.b1_A002 Dark Grown 1 (DG1... 90 6e-016
gb|CW102093.1|CW102093 104_470_11011154_116_34417_011 Sorgh... 86 9e-015
gb|CW153908.1|CW153908 104_555_11145300_116_36346_036 Sorgh... 86 9e-015
gb|CW153909.1|CW153909 104_555_11145300_148_36345_036 Sorgh... 86 9e-015
gb|CW455258.1|CW455258 fsbb001f200a23k0 Sorghum methylation... 86 9e-015
gb|CW318109.1|CW318109 104_810_11473774_148_35870_093 Sorgh... 82 1e-013
gb|BG052205.1|BG052205 RHIZ2_7_E04.b1_A003 Rhizome2 (RHIZ2)... 82 1e-013
gb|CW204822.1|CW204822 104_633_11186753_116_36925_079 Sorgh... 64 3e-008
gb|CW247550.1|CW247550 104_708_11221835_116_35017_038 Sorgh... 56 8e-006
gb|BZ339886.1|BZ339886 ic35d11.b1 WGS-SbicolorF (JM107 adap... 40 0.50
gb|BZ339919.1|BZ339919 ic35f06.b1 WGS-SbicolorF (JM107 adap... 40 0.50
gb|CW093881.1|CW093881 104_457_11000025_148_37474_043 Sorgh... 40 0.50
gb|CW158533.1|CW158533 104_564_11148871_148_36396_026 Sorgh... 40 0.50
gb|CW224968.1|CW224968 104_662_11204102_116_37206_057 Sorgh... 40 0.50
gb|CW271998.1|CW271998 104_744_11403259_116_36225_076 Sorgh... 40 0.50
gb|CW361520.1|CW361520 fsbb001f030c09k0 Sorghum methylation... 40 0.50
gb|CW423682.1|CW423682 fsbb001f133j19k0 Sorghum methylation... 40 0.50
gb|CW479444.1|CW479444 fsbb001f237p09f0 Sorghum methylation... 40 0.50
gb|CF486752.1|CF486752 POL1_39_C03.g1_A002 Pollen Sorghum b... 40 0.50
>gb|CN129755.1|CN129755 RHOH1_37_E12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E12_A002 3', mRNA sequence
Length = 860
Score = 1150 bits (580), Expect = 0.0
Identities = 769/832 (92%)
Strand = Plus / Minus
Query: 95 gttacaaatttattattattcaaaaccacggccatgtggataccacgtcgatgcagtttt 154
|||||||| |||||||| ||||||| ||| ||| ||| ||||||| |||||||||||||
Sbjct: 837 gttacaaacttattattgttcaaaaacacaaccacgtgtataccacatcgatgcagtttt 778
Query: 155 ttggccccatcaaacaagtaggagcagatgagatcgagttgaggcacgcctcctcactcc 214
||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 777 ttgttcccatcaaacaaggaggagcagatgggatggagttgaggcacgcctcctcactcc 718
Query: 215 gccccaaggagggcaagcataatatcctcataatctctagttgtatctttggccacagca 274
||||| ||||||||||| | |||||||||||||||||||||||||||||| || ||||||
Sbjct: 717 gcccctaggagggcaaggagaatatcctcataatctctagttgtatctttagcaacagca 658
Query: 275 cgctccagcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacc 334
|| ||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||
Sbjct: 657 cggtccagcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacc 598
Query: 335 tcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaaga 394
|||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||
Sbjct: 597 tcggcgcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaaga 538
Query: 395 gccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcc 454
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgct 478
Query: 455 cgcagtgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatga 514
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cgcagtgttgaaaggaactcatccttggggtcagctttcagatccttgttgattgcatga 418
Query: 515 gtgaactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtg 574
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 417 ccaaactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgcgtggtg 358
Query: 575 agaattctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtatt 634
||||| || ||||||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 357 agaatcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaatt 298
Query: 635 ttggcttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcacta 694
|||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 297 ttggcttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcactt 238
Query: 695 acaagaggcactaaaagctttcggaagtcgccggtgacatgcgcggcaacgtcctcctcg 754
||||||||||| || ||||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 237 acaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcg 178
Query: 755 agcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcgggcgtg 814
||||| ||||| || ||||| ||||||||||||||| |||| |||||||||||||| |||
Sbjct: 177 agcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgcgggggtg 118
Query: 815 cgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgcctcctcg 874
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 117 cgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgcctcctcg 58
Query: 875 ttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccg 926
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccg 6
>gb|CF482260.1|CF482260 POL1_5_H04.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_5_H04_A002
5', mRNA sequence
Length = 765
Score = 1120 bits (565), Expect = 0.0
Identities = 697/741 (94%)
Strand = Plus / Minus
Query: 422 ctgtcagggcaggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttg 481
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 765 ctgtcagggcaggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttg 706
Query: 482 gggtcagctttcagatccttgttgattgcatgagtgaactgatccttgtagctattgaat 541
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 705 gggtcagctttcagatccttgttgattgcatgaccaaactgatccttgtagttattgaat 646
Query: 542 gttgcaagtagctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactg 601
|||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 645 gttgcaagtagctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactg 586
Query: 602 taagccttcttatggatcttctcatgaagtattttggcttcagaatgagccaaagatgtg 661
|||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct: 585 taagcctttttatcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtg 526
Query: 662 ttcacctctgggccatcatagcggtacgcactaacaagaggcactaaaagctttcggaag 721
|||||||||||||||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 525 ttcacctctgggccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaag 466
Query: 722 tcgccggtgacatgcgcggcaacgtcctcctcgagcgatcgcttaaaccggtcatggtac 781
||||||||||| ||||| || ||||||||||||||||| ||||| || ||||| ||||||
Sbjct: 465 tcgccggtgacgtgcgccgcgacgtcctcctcgagcgagcgcttgaagcggtcgtggtac 406
Query: 782 gcctgcttgaccgcaaagagctgcgcgggcgtgcgcgcgcacgcgatctccaccagcgcg 841
||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 405 gcctgcttggccgcgaagagctgcgcgggggtgcgcgcgcacgcgatctccaccagcgcg 346
Query: 842 cggccgccggggtggctcttcttcgcctcctcgttcgccagcaccgcgtccctctccgcg 901
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cggccgccggggtgccatttcttcgcctcctcgttcgccagcaccgcgtccctctccgcg 286
Query: 902 gggtccagcgtccacaggatcaccgccctctcgaacttgccgtggatctcgtcgccgaga 961
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 285 gggtccagcgtccacaggatcaccgttctctcgaacttgccgtggatctcgtcgccgagg 226
Query: 962 gcgcggagcagctccttcccgtacgcctcggcgtagccgcggcggatcgcgcggcgctgc 1021
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 225 gcgcggagcagctccttcccgtacgcctcggcgtacgcgcggcggatcgcgcggcgctgc 166
Query: 1022 gcggcgttgcggtgggccaggatggagatgatcagcttctcgttggtgccccaaccttcg 1081
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 165 gccgcgttgcggtgggccaggatggagatgatcagcttctcgttggtgccccaaccctcg 106
Query: 1082 aaggccttgtggagctgctcgcagtcctcggcgacggccgggacggaggaaggaacggtg 1141
||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||
Sbjct: 105 aaggccttgtggagctgctcggcgtcctcggcgacggccgggacggaggaggggacggtg 46
Query: 1142 agcgtcgccattgcgtcggtt 1162
|| ||||||||||||||||||
Sbjct: 45 agggtcgccattgcgtcggtt 25
>gb|CN134246.1|CN134246 OX1_25_E03.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_E03_A002 3', mRNA sequence
Length = 843
Score = 1098 bits (554), Expect = 0.0
Identities = 752/817 (92%), Gaps = 2/817 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 815 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 758
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 757 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 698
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 697 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 638
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 637 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 578
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 577 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 518
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 458
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 457 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 398
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 397 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 338
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 337 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 278
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 277 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 218
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgac 732
||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 217 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgac 158
Query: 733 atgcgcggcaacgtcctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttgac 792
||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||| |
Sbjct: 157 gtgcgccgcgacgtcctcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttggc 98
Query: 793 cgcaaagagctgcgcgggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggg 852
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cgcgaagagctgcgcgggggtgcgcgcgcacgcgatctccaccagcgcgcggccgccggg 38
Query: 853 gtggctcttcttcgcctcctcgttcgccagcaccgcg 889
||| | ||||||||||||||||||||||||||||||
Sbjct: 37 gtgccatttcttcgcctcctcgttcgccagcaccgcg 1
>gb|CD225943.1|CD225943 CCC1_42_F11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_F11_A007 5', mRNA sequence
Length = 654
Score = 946 bits (477), Expect = 0.0
Identities = 591/629 (93%)
Strand = Plus / Minus
Query: 534 tattgaatgttgcaagtagctgagctttgctccgtgtggtgagaattctaatgatctcct 593
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 650 tattgaatgttgcaagtagctgagctttgctccgtgtggtgagaatcctgatgatctcct 591
Query: 594 catcactgtaagccttcttatggatcttctcatgaagtattttggcttcagaatgagcca 653
| |||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 590 cgtcactgtaagcctttttatcgatcttctcatgaagaattttggcttcagaatgggcca 531
Query: 654 aagatgtgttcacctctgggccatcatagcggtacgcactaacaagaggcactaaaagct 713
|||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||
Sbjct: 530 aagacgtgttcacctctgggccatcatagcggtatgcacttacaagaggcaccaacagct 471
Query: 714 ttcggaagtcgccggtgacatgcgcggcaacgtcctcctcgagcgatcgcttaaaccggt 773
| ||||||||||||||||| ||||| || ||||||||||||||||| ||||| || ||||
Sbjct: 470 tgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcgagcgagcgcttgaagcggt 411
Query: 774 catggtacgcctgcttgaccgcaaagagctgcgcgggcgtgcgcgcgcacgcgatctcca 833
| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 410 cgtggtacgcctgcttggccgcgaagagctgcgcgggggtgcgcgcgcacgcgatctcca 351
Query: 834 ccagcgcgcggccgccggggtggctcttcttcgcctcctcgttcgccagcaccgcgtccc 893
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 350 ccagcgcgcggccgccggggtgccatttcttcgcctcctcgttcgccagcaccgcgtccc 291
Query: 894 tctccgcggggtccagcgtccacaggatcaccgccctctcgaacttgccgtggatctcgt 953
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 290 tctccgcggggtccagcgtccacaggatcaccgttctctcgaacttgccgtggatctcgt 231
Query: 954 cgccgagagcgcggagcagctccttcccgtacgcctcggcgtagccgcggcggatcgcgc 1013
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 230 cgccgagggcgcggagcagctccttcccgtacgcctcggcgtacgcgcggcggatcgcgc 171
Query: 1014 ggcgctgcgcggcgttgcggtgggccaggatggagatgatcagcttctcgttggtgcccc 1073
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ggcgctgcgccgcgttgcggtgggccaggatggagatgatcagcttctcgttggtgcccc 111
Query: 1074 aaccttcgaaggccttgtggagctgctcgcagtcctcggcgacggccgggacggaggaag 1133
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 110 aaccttcgaaggccttgtggagctgctcggcgtcctcggcgacggccgggacggaggagg 51
Query: 1134 gaacggtgagcgtcgccattgcgtcggtt 1162
| |||||||| |||||| |||||||||||
Sbjct: 50 ggacggtgagggtcgcctttgcgtcggtt 22
>gb|CX609506.1|CX609506 ANR1_13_D03.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_13_D03_A002 3', mRNA sequence
Length = 780
Score = 942 bits (475), Expect = 0.0
Identities = 658/718 (91%), Gaps = 2/718 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 718 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 661
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 660 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 601
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 600 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 541
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 540 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 481
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 480 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 421
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atctgtgtccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 361
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 360 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 301
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 300 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 241
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 240 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 181
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 180 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 121
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgac 732
||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 120 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgac 61
Query: 733 atgcgcggcaacgtcctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttg 790
||||| || ||||||||||||||||| ||||| || ||||| |||||||||||||||
Sbjct: 60 gtgcgccgcgacgtcctcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttg 3
>gb|CN129931.1|CN129931 RHOH1_38_F11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_38_F11_A002 3', mRNA sequence
Length = 721
Score = 936 bits (472), Expect = 0.0
Identities = 640/696 (91%)
Strand = Plus / Minus
Query: 95 gttacaaatttattattattcaaaaccacggccatgtggataccacgtcgatgcagtttt 154
|||||||| |||||||| ||||||| ||| ||| ||| ||||||| |||||||||||||
Sbjct: 698 gttacaaacttattattgttcaaaaacacaaccacgtgtataccacatcgatgcagtttt 639
Query: 155 ttggccccatcaaacaagtaggagcagatgagatcgagttgaggcacgcctcctcactcc 214
||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 638 ttgttcccatcaaacaaggaggagcagatgggatggagttgaggcacgcctcctcactcc 579
Query: 215 gccccaaggagggcaagcataatatcctcataatctctagttgtatctttggccacagca 274
||||| ||||||||||| | |||||||||||||||||||||||||||||| || ||||||
Sbjct: 578 gcccctaggagggcaaggagaatatcctcataatctctagttgtatctttagcaacagca 519
Query: 275 cgctccagcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacc 334
|| ||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||
Sbjct: 518 cggtccagcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacc 459
Query: 335 tcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaaga 394
|||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||
Sbjct: 458 tcggcgcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaaga 399
Query: 395 gccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcc 454
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgct 339
Query: 455 cgcagtgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatga 514
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cgcagtgttgaaaggaactcatccttggggtcagctttcagatccttgttgattgcatga 279
Query: 515 gtgaactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtg 574
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ccaaactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtg 219
Query: 575 agaattctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtatt 634
||||| || ||||||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 218 agaatcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaatt 159
Query: 635 ttggcttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcacta 694
|||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 158 ttggcttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcactt 99
Query: 695 acaagaggcactaaaagctttcggaagtcgccggtgacatgcgcggcaacgtcctcctcg 754
||||||||||| || ||||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 98 acaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcg 39
Query: 755 agcgatcgcttaaaccggtcatggtacgcctgcttg 790
||||| ||||| || ||||| |||||||||||||||
Sbjct: 38 agcgagcgcttgaagcggtcgtggtacgcctgcttg 3
>gb|CN146586.1|CN146586 WOUND1_42_E08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_E08_A002 3', mRNA sequence
Length = 725
Score = 928 bits (468), Expect = 0.0
Identities = 639/696 (91%)
Strand = Plus / Minus
Query: 95 gttacaaatttattattattcaaaaccacggccatgtggataccacgtcgatgcagtttt 154
|||||||| |||||||| ||||||| ||| ||| || ||||||| |||||||||||||
Sbjct: 700 gttacaaacttattattgttcaaaaacacaaccacttgtataccacatcgatgcagtttt 641
Query: 155 ttggccccatcaaacaagtaggagcagatgagatcgagttgaggcacgcctcctcactcc 214
||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 640 ttgttcccatcaaacaaggaggagcagatgggatggagttgaggcacgcctcctcactcc 581
Query: 215 gccccaaggagggcaagcataatatcctcataatctctagttgtatctttggccacagca 274
||||| ||||||||||| | |||||||||||||||||||||||||||||| || ||||||
Sbjct: 580 gcccctaggagggcaaggagaatatcctcataatctctagttgtatctttagcaacagca 521
Query: 275 cgctccagcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacc 334
|| ||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||
Sbjct: 520 cggtccagcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacc 461
Query: 335 tcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaaga 394
|||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||
Sbjct: 460 tcggcgcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaaga 401
Query: 395 gccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcc 454
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgct 341
Query: 455 cgcagtgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatga 514
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cgcagtgttgaaaggaactcatccttggggtcagctttcagatccttgttgattgcatga 281
Query: 515 gtgaactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtg 574
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ccaaactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtg 221
Query: 575 agaattctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtatt 634
||||| || ||||||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 220 agaatcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaatt 161
Query: 635 ttggcttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcacta 694
|||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 160 ttggcttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcactt 101
Query: 695 acaagaggcactaaaagctttcggaagtcgccggtgacatgcgcggcaacgtcctcctcg 754
||||||||||| || ||||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 100 acaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcg 41
Query: 755 agcgatcgcttaaaccggtcatggtacgcctgcttg 790
||||| ||||| || ||||| |||||||||||||||
Sbjct: 40 agcgagcgcttgaagcggtcgtggtacgcctgcttg 5
>gb|CF428809.1|CF428809 PH1_17_E03.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_E03_A002 5', mRNA sequence
Length = 623
Score = 908 bits (458), Expect = 0.0
Identities = 583/622 (93%), Gaps = 2/622 (0%)
Strand = Plus / Minus
Query: 455 cgcagtgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatga 514
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cgcagtgttgaaaggaactcatccttggggtcagctttcagatccttgttgattgcatga 563
Query: 515 gtgaactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtg 574
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccaaactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtg 503
Query: 575 agaattctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtatt 634
||||| || ||||||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 502 agaatcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaatt 443
Query: 635 ttggcttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcacta 694
|||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 442 ttggcttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcactt 383
Query: 695 acaagaggcactaaaagctttcggaagtcgccggtgacatgcgcggcaacgtcctcctcg 754
||||||||||| || ||||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 382 acaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcg 323
Query: 755 agcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcgggcgtg 814
||||| ||||| || ||||| ||||||||||||||| |||| |||||||||||||| |||
Sbjct: 322 agcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgcgggggtg 263
Query: 815 cgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgcctcctcg 874
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 262 cgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgcctcctcg 203
Query: 875 ttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgccctctcg 934
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 202 ttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgttctctcg 143
Query: 935 aacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccgtacgcctcggcg 994
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 142 aacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccgtacgcctcggcg 83
Query: 995 tagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggcc-aggatggagatgat 1053
|| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 82 tacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccnaggatggagatgat 23
Query: 1054 cagcttc-tcgttggtgcccca 1074
||||||| ||||||||||||||
Sbjct: 22 cagcttcttcgttggtgcccca 1
>gb|CX611887.1|CX611887 ANR1_27_G01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_G01_A002 3', mRNA sequence
Length = 681
Score = 898 bits (453), Expect = 0.0
Identities = 625/680 (91%), Gaps = 3/680 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| |||||||| || ||| |||
Sbjct: 677 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaac-acaaccacgtg 621
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 620 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 561
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 560 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 501
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 500 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 441
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 440 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 381
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 321
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 320 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 261
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 260 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 201
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 200 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 141
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 140 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 81
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgac 732
||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 80 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgac 21
Query: 733 atgcgcggcaacgtcctcct 752
||||| || ||||||||||
Sbjct: 20 gtgcgccgcgacgtcctcct 1
>gb|CN131290.1|CN131290 RHOH1_47_B12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_B12_A002 3', mRNA sequence
Length = 690
Score = 894 bits (451), Expect = 0.0
Identities = 613/666 (92%), Gaps = 2/666 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 664 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 607
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 606 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 547
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 546 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 487
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 486 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 427
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 426 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 367
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 307
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 306 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 247
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 246 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 187
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 186 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 127
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 126 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 67
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgac 732
||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 66 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgac 7
Query: 733 atgcgc 738
|||||
Sbjct: 6 gtgcgc 1
>gb|BE358403.1|BE358403 DG1_29_B05.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 677
Score = 890 bits (449), Expect = 0.0
Identities = 608/660 (92%), Gaps = 2/660 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 659 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 602
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 601 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 542
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 541 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 482
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 481 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 422
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 421 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 362
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 302
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 301 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 242
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 241 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 182
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 181 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 122
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 121 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 62
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgac 732
||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 61 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgac 2
>gb|AW565401.1|AW565401 LG1_343_H02.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 683
Score = 884 bits (446), Expect = 0.0
Identities = 605/657 (92%), Gaps = 2/657 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 655 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 598
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 597 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 538
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 537 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 478
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 477 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 418
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 417 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 358
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 298
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 297 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 238
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 237 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 178
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 177 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 118
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 117 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 58
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggt 729
||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||
Sbjct: 57 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggt 1
>gb|BE358636.1|BE358636 DG1_30_E11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 658
Score = 868 bits (438), Expect = 0.0
Identities = 597/649 (91%), Gaps = 2/649 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 647 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 590
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 589 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 530
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 529 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 470
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 469 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 410
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 409 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 350
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 290
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 289 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 230
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 229 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 170
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 169 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 110
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 109 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 50
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctttcggaag 721
||||||||||||||| ||||| ||||||||||| || ||||| ||||||
Sbjct: 49 gccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaag 1
>gb|AW744951.1|AW744951 LG1_385_B06.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 860 bits (434), Expect = 0.0
Identities = 548/586 (93%)
Strand = Plus / Minus
Query: 329 tcgacctcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcct 388
|||||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||
Sbjct: 594 tcgacctcggcgcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcct 535
Query: 389 ccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatg 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatg 475
Query: 449 atcgcccgcagtgttgaaagaaactcatccttggggtcagctttcagatccttgttgatt 508
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 474 atcgctcgcagtgttgaaaggaactcatccttggggtcagctttcagatccttgttgatt 415
Query: 509 gcatgagtgaactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgt 568
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 414 gcatgaccaaactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgt 355
Query: 569 gtggtgagaattctaatgatctcctcatcactgtaagccttcttatggatcttctcatga 628
||||||||||| || ||||||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 354 gtggtgagaatcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatga 295
Query: 629 agtattttggcttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtac 688
|| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 294 agaattttggcttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtat 235
Query: 689 gcactaacaagaggcactaaaagctttcggaagtcgccggtgacatgcgcggcaacgtcc 748
||||| ||||||||||| || ||||| ||||||||||||||||| ||||| || ||||||
Sbjct: 234 gcacttacaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgccgcgacgtcc 175
Query: 749 tcctcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcg 808
||||||||||| ||||| || ||||| ||||||||||||||| |||| ||||||||||||
Sbjct: 174 tcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgcg 115
Query: 809 ggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgcc 868
|| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 114 ggggtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgcc 55
Query: 869 tcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtcc 914
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 54 tcctcgttcgccagcaccgcgtccctctccgcgaggtccagcgtcc 9
>gb|BG357510.1|BG357510 OV2_30_G08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 663
Score = 846 bits (427), Expect = 0.0
Identities = 589/642 (91%), Gaps = 2/642 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 644 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 587
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 586 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 527
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 526 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 467
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 466 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 407
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 406 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 347
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 346 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgacagggca 287
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 286 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 227
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 226 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 167
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 166 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 107
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 106 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 47
Query: 673 gccatcatagcggtacgcactaacaagaggcactaaaagctt 714
||||||||||||||| ||||| |||||| |||| || |||||
Sbjct: 46 gccatcatagcggtatgcacttacaagaagcaccaacagctt 5
>gb|CF428698.1|CF428698 PH1_17_E03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_17_E03_A002 3', mRNA sequence
Length = 650
Score = 844 bits (426), Expect = 0.0
Identities = 573/621 (92%), Gaps = 2/621 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 623 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 566
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 565 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 506
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 505 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 446
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 445 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 386
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 385 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 326
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 266
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 265 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 206
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 205 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 146
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 145 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 86
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 85 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 26
Query: 673 gccatcatagcggtacgcact 693
||||||||||||||| |||||
Sbjct: 25 gccatcatagcggtatgcact 5
>gb|CD235068.1|CD235068 SS1_21_C11.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_21_C11_A012 3', mRNA sequence
Length = 653
Score = 837 bits (422), Expect = 0.0
Identities = 572/621 (92%), Gaps = 2/621 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||| ||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 623 gcgctgctagtgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 566
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 565 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 506
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 505 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 446
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 445 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 386
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 385 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 326
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 266
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 265 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 206
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 205 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 146
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 145 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 86
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 85 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 26
Query: 673 gccatcatagcggtacgcact 693
||||||||||||||| |||||
Sbjct: 25 gccatcatagcggtatgcact 5
>gb|CD221439.1|CD221439 CCC1_54_G12.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_54_G12_A007 5', mRNA sequence
Length = 603
Score = 833 bits (420), Expect = 0.0
Identities = 519/552 (94%)
Strand = Plus / Minus
Query: 611 ttatggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctct 670
|||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 601 ttatcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctct 542
Query: 671 gggccatcatagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtg 730
||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 541 gggccatcatagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtg 482
Query: 731 acatgcgcggcaacgtcctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttg 790
|| ||||| || ||||||||||||||||| ||||| || ||||| |||||||||||||||
Sbjct: 481 acgtgcgccgcgacgtcctcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttg 422
Query: 791 accgcaaagagctgcgcgggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccg 850
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccgcgaagagctgcgcgggggtgcgcgcgcacgcgatctccaccagcgcgcggccgccg 362
Query: 851 gggtggctcttcttcgcctcctcgttcgccagcaccgcgtccctctccgcggggtccagc 910
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggtgccatttcttcgcctcctcgttcgccagcaccgcgtccctctccgcggggtccagc 302
Query: 911 gtccacaggatcaccgccctctcgaacttgccgtggatctcgtcgccgagagcgcggagc 970
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 301 gtccacaggatcaccgttctctcgaacttgccgtggatctcgtcgccgagggcgcggagc 242
Query: 971 agctccttcccgtacgcctcggcgtagccgcggcggatcgcgcggcgctgcgcggcgttg 1030
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 241 agctccttcccgtacgcctcggcgtacgcgcggcggatcgcgcggcgctgcgccgcgttg 182
Query: 1031 cggtgggccaggatggagatgatcagcttctcgttggtgccccaaccttcgaaggccttg 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggtgggccaggatggagatgatcagcttctcgttggtgccccaaccttcgaaggccttg 122
Query: 1091 tggagctgctcgcagtcctcggcgacggccgggacggaggaaggaacggtgagcgtcgcc 1150
|||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 121 tggagctgctcggcgtcctcggcgacggccgggacggaggaggggacggtgagggtcgcc 62
Query: 1151 attgcgtcggtt 1162
||||||||||||
Sbjct: 61 attgcgtcggtt 50
>gb|CD225918.1|CD225918 CCC1_42_F11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_42_F11_A007 3', mRNA sequence
Length = 624
Score = 823 bits (415), Expect = 0.0
Identities = 571/621 (91%), Gaps = 3/621 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 620 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 563
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||| | ||||||||||||| ||||||||||| ||| |||
Sbjct: 562 tataccacatcgatgcagttttt-gttcccatcaaacaaggaggagcagatgggatggag 504
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 503 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 444
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 443 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 384
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 383 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 324
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atctgtgcccacgcctccnagagccagtcgaatgactttctcgaagtatctgtcagggca 264
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 263 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 204
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 203 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 144
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 143 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 84
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgg 672
|| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 83 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgg 24
Query: 673 gccatcatagcggtacgcact 693
||||||||||||||| |||||
Sbjct: 23 gccatcatagcggtatgcact 3
>gb|CN131364.1|CN131364 RHOH1_47_B12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_47_B12_A002 5', mRNA sequence
Length = 835
Score = 819 bits (413), Expect = 0.0
Identities = 548/593 (92%)
Strand = Plus / Minus
Query: 224 agggcaagcataatatcctcataatctctagttgtatctttggccacagcacgctccagc 283
|||||||| | |||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 835 agggcaaggagaatatcctcataatctctagttgtatctttagcaacagcacggtccagc 776
Query: 284 ggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcgcga 343
||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||||||||
Sbjct: 775 ggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacctcggcgcga 716
Query: 344 gtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaagagccagtcga 403
||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct: 715 gtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaagagccagtcga 656
Query: 404 atgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagtgtt 463
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 655 atgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgctcgcagtgtt 596
Query: 464 gaaagaaactcatccttggggtcagctttcagatccttgttgattgcatgagtgaactga 523
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 595 gaaaggaactcatccttggggtcagctttcagatccttgttgattgcatgaccaaactga 536
Query: 524 tccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtgagaattcta 583
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 535 tccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtgagaatcctg 476
Query: 584 atgatctcctcatcactgtaagccttcttatggatcttctcatgaagtattttggcttca 643
||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 475 atgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaattttggcttca 416
Query: 644 gaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcactaacaagaggc 703
||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 415 gaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcacttacaagaggc 356
Query: 704 actaaaagctttcggaagtcgccggtgacatgcgcggcaacgtcctcctcgagcgatcgc 763
|| || ||||| ||||||||||||||||| ||||| || ||||||||||||||||| |||
Sbjct: 355 accaacagcttgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcgagcgagcgc 296
Query: 764 ttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcgggcgtgcg 816
|| || ||||| ||||||||||||||| |||| |||||||||||||| |||||
Sbjct: 295 ttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgcgggggtgcg 243
Score = 234 bits (118), Expect = 2e-059
Identities = 139/146 (95%)
Strand = Plus / Minus
Query: 1017 gctgcgcggcgttgcggtgggccaggatggagatgatcagcttctcgttggtgccccaac 1076
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gctgcgcgggggtgcggtgggccaggatggagatgatcagcttctcgttggtgccccaac 199
Query: 1077 cttcgaaggccttgtggagctgctcgcagtcctcggcgacggccgggacggaggaaggaa 1136
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
Sbjct: 198 cttcgaaggccttgtggagctgctcggcgtcctcggcgacggccgggacggaggagggga 139
Query: 1137 cggtgagcgtcgccattgcgtcggtt 1162
||||||| ||||||||||||||||||
Sbjct: 138 cggtgagggtcgccattgcgtcggtt 113
Score = 56.0 bits (28), Expect = 8e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1251 ccgcggtgcgcgcggggaacaggcgccgggag 1282
|||||||||||||||||||||| |||||||||
Sbjct: 52 ccgcggtgcgcgcggggaacagacgccgggag 21
>gb|CD235196.1|CD235196 SS1_21_C11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA clone
SS1_21_C11_A012 5', mRNA sequence
Length = 611
Score = 801 bits (404), Expect = 0.0
Identities = 509/544 (93%)
Strand = Plus / Minus
Query: 619 cttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgggccatc 678
|||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 611 cttctcatgaagaattttggcttcagaatggcccaaagacgtgttcacctctgggccatc 552
Query: 679 atagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgacatgcgc 738
||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 551 atagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgc 492
Query: 739 ggcaacgtcctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaa 798
|| ||||||||||||||||| ||||| || ||||| ||||||||||||||| |||| ||
Sbjct: 491 cgcgacgtcctcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaa 432
Query: 799 gagctgcgcgggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggct 858
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 431 gagctgcgcgggggtgcgcgcgcacgcgatctccaccagcgcgtggccgccggggtgcca 372
Query: 859 cttcttcgcctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacag 918
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tttcttcgcctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacag 312
Query: 919 gatcaccgccctctcgaacttgccgtggatctcgtcgccgagagcgcggagcagctcctt 978
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 311 gatcaccgttctctcgaacttgccgtggatctcgtcgccgagggcgcggagcagctcctt 252
Query: 979 cccgtacgcctcggcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggc 1038
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 251 cccgtacgcctcggcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggc 192
Query: 1039 caggatggagatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctg 1098
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 191 caggatggagatgatcagcttctcgttggtgccccaatcttcgaaggccttgtggagctg 132
Query: 1099 ctcgcagtcctcggcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtc 1158
|||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 131 ctcggcgtcctcggcgacggccgggacggaggaggggacggtgagggtcgccattgcgtc 72
Query: 1159 ggtt 1162
||||
Sbjct: 71 ggtt 68
>gb|AW678166.1|AW678166 WS1_13_H01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 635
Score = 797 bits (402), Expect = 0.0
Identities = 546/593 (92%), Gaps = 2/593 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 591 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 534
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 533 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 474
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 473 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 414
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 413 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 354
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 353 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 294
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 234
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 233 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 174
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 173 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 114
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 113 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 54
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttca 665
|| ||||||||||||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 53 atcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttca 1
>gb|BG053007.1|BG053007 RHIZ2_16_C07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 591
Score = 797 bits (402), Expect = 0.0
Identities = 516/554 (93%)
Strand = Plus / Minus
Query: 134 ataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgagt 193
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| ||||
Sbjct: 555 ataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggagt 496
Query: 194 tgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctcta 253
|||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||
Sbjct: 495 tgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctcta 436
Query: 254 gttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctcc 313
||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 435 gttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttcc 376
Query: 314 tttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctca 373
||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 375 cctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctca 316
Query: 374 tcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcag 433
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcag 256
Query: 434 gtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagctttc 493
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 255 gtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttagggtcagctttc 196
Query: 494 agatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtagc 553
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 195 agatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtagc 136
Query: 554 tgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctta 613
|||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 135 tgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttta 76
Query: 614 tggatcttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctggg 673
| ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 75 tcgatcttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctggg 16
Query: 674 ccatcatagcggta 687
||||||||||||||
Sbjct: 15 ccatcatagcggta 2
>gb|BG356749.1|BG356749 OV2_9_E04.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 682
Score = 789 bits (398), Expect = 0.0
Identities = 539/585 (92%), Gaps = 2/585 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 665 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 608
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 607 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 548
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 547 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 488
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 487 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 428
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 427 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 368
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 308
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 307 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 248
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 247 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 188
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 187 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 128
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaaaga 657
|| ||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 127 atcgatcttctcatgaagaattttggcttcagaatgggccaaaga 83
>gb|CD221496.1|CD221496 CCC1_55_B01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_55_B01_A007 3', mRNA sequence
Length = 585
Score = 783 bits (395), Expect = 0.0
Identities = 536/582 (92%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 580 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 523
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 522 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 463
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 462 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 403
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 402 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 343
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 342 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 283
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 223
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 222 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 163
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 162 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 103
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 102 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 43
Query: 613 atggatcttctcatgaagtattttggcttcagaatgagccaa 654
|| ||||||||||||||| ||||||||||||||||| |||||
Sbjct: 42 atcgatcttctcatgaagaattttggcttcagaatgggccaa 1
>gb|CF771952.1|CF771952 DSBF1_26_F03.g9_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_26_F03_A010 3', mRNA sequence
Length = 595
Score = 777 bits (392), Expect = 0.0
Identities = 526/570 (92%), Gaps = 2/570 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 568 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 511
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 510 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 451
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 450 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 391
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 390 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 331
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 330 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 271
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atctgtgcccacgcctccnagagccagtcgaatgactttctcgaagtatctgtcagggca 211
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 210 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 151
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 150 cagatccttgttgattgcatgaccgaactgatccttgtagttattgaatgttgcaagtag 91
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 90 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 31
Query: 613 atggatcttctcatgaagtattttggcttc 642
|||||||||||||||||| |||||||||||
Sbjct: 30 atggatcttctcatgaagaattttggcttc 1
>gb|CN130018.1|CN130018 RHOH1_38_F11.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_38_F11_A002 5', mRNA sequence
Length = 622
Score = 775 bits (391), Expect = 0.0
Identities = 481/511 (94%)
Strand = Plus / Minus
Query: 652 caaagatgtgttcacctctgggccatcatagcggtacgcactaacaagaggcactaaaag 711
|||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| || ||
Sbjct: 622 caaagacgtgttcacctctgggccatcatagcggtatgcacttacaagaggcaccaacag 563
Query: 712 ctttcggaagtcgccggtgacatgcgcggcaacgtcctcctcgagcgatcgcttaaaccg 771
||| ||||||||||||||||| ||||| || ||||||||||||||||| ||||| || ||
Sbjct: 562 cttgcggaagtcgccggtgacgtgcgccgcgacgtcctcctcgagcgagcgcttgaagcg 503
Query: 772 gtcatggtacgcctgcttgaccgcaaagagctgcgcgggcgtgcgcgcgcacgcgatctc 831
||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 502 gtcgtggtacgcctgcttggccgcgaagagctgcgcgggggtgcgcgcgcacgcgatctc 443
Query: 832 caccagcgcgcggccgccggggtggctcttcttcgcctcctcgttcgccagcaccgcgtc 891
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 442 caccagcgcgcggccgccggggtgccatttcttcgcctcctcgttcgccagcaccgcgtc 383
Query: 892 cctctccgcggggtccagcgtccacaggatcaccgccctctcgaacttgccgtggatctc 951
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 382 cctctccgcggggtccagcgtccacaggatcaccgttctctcgaacttgccgtggatctc 323
Query: 952 gtcgccgagagcgcggagcagctccttcccgtacgcctcggcgtagccgcggcggatcgc 1011
||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 322 gtcgccgagggcgcggagcagctccttcccgtacgcctcggcgtacgcgcggcggatcgc 263
Query: 1012 gcggcgctgcgcggcgttgcggtgggccaggatggagatgatcagcttctcgttggtgcc 1071
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcggcgctgcgccgcgttgcggtgggccaggatggagatgatcagcttctcgttggtgcc 203
Query: 1072 ccaaccttcgaaggccttgtggagctgctcgcagtcctcggcgacggccgggacggagga 1131
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 ccaaccttcgaaggccttgtggagctgctcggcgtcctcggcgacggccgggacggagga 143
Query: 1132 aggaacggtgagcgtcgccattgcgtcggtt 1162
|| |||||||| ||||||||||||||||||
Sbjct: 142 ggggacggtgagggtcgccattgcgtcggtt 112
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1251 ccgcggtgcgcgcggggaacaggcgccgggag 1282
|||| ||||||||||||||||| |||||||||
Sbjct: 51 ccgcagtgcgcgcggggaacagacgccgggag 20
>gb|CF756992.1|CF756992 DSAF1_12_C05.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_12_C05_A011 3', mRNA sequence
Length = 581
Score = 763 bits (385), Expect = 0.0
Identities = 514/556 (92%), Gaps = 2/556 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 554 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 497
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 496 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 437
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 436 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 377
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 376 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 317
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 316 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 257
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 197
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 196 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 137
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 136 cagatccttgttgattgcatgaccgaactgatccttgtagttattgaatgttgcaagtag 77
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 76 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 17
Query: 613 atggatcttctcatga 628
||||||||||||||||
Sbjct: 16 atggatcttctcatga 1
>gb|CF482175.1|CF482175 POL1_5_H04.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_5_H04_A002 3', mRNA sequence
Length = 598
Score = 751 bits (379), Expect = 0.0
Identities = 523/570 (91%), Gaps = 2/570 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 568 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 511
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 510 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 451
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
|||||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 450 ttgagggacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 391
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 390 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 331
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 330 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 271
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atctgtgcccacgcctcccagagccagtcgaatgactttctcgaagtatctgtcagggca 211
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 210 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 151
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 150 cagatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 91
Query: 553 ctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctt 612
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||
Sbjct: 90 ctgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttt 31
Query: 613 atggatcttctcatgaagtattttggcttc 642
|| ||||||||||||||| |||||||||||
Sbjct: 30 atcgatcttctcatgaagaattttggcttc 1
>gb|BG412581.1|BG412581 OV2_36_B12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 745 bits (376), Expect = 0.0
Identities = 481/516 (93%)
Strand = Plus / Minus
Query: 142 tcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgagttgaggcac 201
|||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 624 tcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggagttgaggcac 565
Query: 202 gcctcctcactccgccccaaggagggcaagcataatatcctcataatctctagttgtatc 261
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct: 564 gcctcctcactccgcccctaggagggcaaggagaatatcctcataatctctagttgtatc 505
Query: 262 tttggccacagcacgctccagcggcacactgtttctcttctgataagcctcctttatcag 321
||| || |||||||| ||||||||||||||||| |||||||| ||||| ||| ||| ||
Sbjct: 504 tttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttcccctattag 445
Query: 322 cttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcc 381
||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||
Sbjct: 444 cttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctcatctgtgcc 385
Query: 382 catgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagca 441
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagca 325
Query: 442 ccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagctttcagatcctt 501
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 324 ccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagctttcagatcctt 265
Query: 502 gttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtagctgagcttt 561
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 gttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtagctgagcttt 205
Query: 562 gctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttcttatggatctt 621
|||||||||||||||||| || ||||||||||| |||||||||||||| |||| ||||||
Sbjct: 204 gctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagcctttttatcgatctt 145
Query: 622 ctcatgaagtattttggcttcagaatgagccaaaga 657
||||||||| ||||||||||||||||| ||||||||
Sbjct: 144 ctcatgaagaattttggcttcagaatgggccaaaga 109
>gb|BG103881.1|BG103881 RHIZ2_37_H09.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 530
Score = 733 bits (370), Expect = 0.0
Identities = 481/518 (92%)
Strand = Plus / Minus
Query: 221 aggagggcaagcataatatcctcataatctctagttgtatctttggccacagcacgctcc 280
||||||||||| | |||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 524 aggagggcaaggagaatatcctcataatctctagttgtatctttagcaacagcacggtcc 465
Query: 281 agcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggcg 340
|||||||||||||| |||||||| ||||| ||| ||| |||||||||||||||||||||
Sbjct: 464 agcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacctcggcg 405
Query: 341 cgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaagagccagt 400
|||||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||
Sbjct: 404 cgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaagagccagt 345
Query: 401 cgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcagt 460
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 344 cgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgctcgcagt 285
Query: 461 gttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatgagtgaac 520
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 284 gttgaaaggaactcatccttagggtcagctttcagatccttgttgattgcatgaccaaac 225
Query: 521 tgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtgagaatt 580
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtgagaatc 165
Query: 581 ctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtattttggct 640
|| ||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct: 164 ctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaattttggct 105
Query: 641 tcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcactaacaaga 700
|||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 104 tcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcacttacaaga 45
Query: 701 ggcactaaaagctttcggaagtcgccggtgacatgcgc 738
||||| || ||||| ||||||||||||||||| |||||
Sbjct: 44 ggcaccaacagcttgcggaagtcgccggtgacgtgcgc 7
>gb|BG048173.1|BG048173 OV1_28_F01.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 716 bits (361), Expect = 0.0
Identities = 463/497 (93%)
Strand = Plus / Minus
Query: 134 ataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgagt 193
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| ||||
Sbjct: 500 ataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggagt 441
Query: 194 tgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctcta 253
|||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||
Sbjct: 440 tgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctcta 381
Query: 254 gttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctcc 313
||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| |||
Sbjct: 380 gttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttcc 321
Query: 314 tttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctca 373
||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 320 cctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctca 261
Query: 374 tcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcag 433
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcag 201
Query: 434 gtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagctttc 493
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 200 gtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagctttc 141
Query: 494 agatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtagc 553
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 140 agatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtagc 81
Query: 554 tgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttctta 613
|||||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||
Sbjct: 80 tgagctttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagccttttta 21
Query: 614 tggatcttctcatgaag 630
| |||||||||||||||
Sbjct: 20 tcgatcttctcatgaag 4
>gb|AW677502.1|AW677502 DG1_8_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 489
Score = 696 bits (351), Expect = 0.0
Identities = 423/447 (94%)
Strand = Plus / Minus
Query: 716 cggaagtcgccggtgacatgcgcggcaacgtcctcctcgagcgatcgcttaaaccggtca 775
||||||||||||||||| ||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 486 cggaagtcgccggtgacgtgcgccgcgacgtcctcctcgagcgagcgcttgaagcggtcg 427
Query: 776 tggtacgcctgcttgaccgcaaagagctgcgcgggcgtgcgcgcgcacgcgatctccacc 835
||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 426 tggtacgcctgcttggccgcgaagagctgcgcgggggtgcgcgcgcacgcgatctccacc 367
Query: 836 agcgcgcggccgccggggtggctcttcttcgcctcctcgttcgccagcaccgcgtccctc 895
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 366 agcgcgcggccgccggggtgccatttcttcgcctcctcgttcgccagcaccgcgtccctc 307
Query: 896 tccgcggggtccagcgtccacaggatcaccgccctctcgaacttgccgtggatctcgtcg 955
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 306 tccgcggggtccagcgtccacaggatcaccgttctctcgaacttgccgtggatctcgtcg 247
Query: 956 ccgagagcgcggagcagctccttcccgtacgcctcggcgtagccgcggcggatcgcgcgg 1015
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 246 ccgagggcgcggagcagctccttcccgtacgcctcggcgtacgcgcggcggatcgcgcgg 187
Query: 1016 cgctgcgcggcgttgcggtgggccaggatggagatgatcagcttctcgttggtgccccaa 1075
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cgctgcgccgcgttgcggtgggccaggatggagatgatcagcttctcgttggtgccccaa 127
Query: 1076 ccttcgaaggccttgtggagctgctcgcagtcctcggcgacggccgggacggaggaagga 1135
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 126 ccttcgaaggccttgtggagctgctcggcgtcctcggcgacggccgggacggaggagggg 67
Query: 1136 acggtgagcgtcgccattgcgtcggtt 1162
|||||||| ||||||||||||||||||
Sbjct: 66 acggtgagggtcgccattgcgtcggtt 40
>gb|BG053082.1|BG053082 RHIZ2_16_D07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 470
Score = 660 bits (333), Expect = 0.0
Identities = 429/461 (93%)
Strand = Plus / Minus
Query: 278 tccagcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcg 337
||||||||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||
Sbjct: 467 tccagcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacctcg 408
Query: 338 gcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaagagcc 397
||||||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 407 gcgcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaagagcc 348
Query: 398 agtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgc 457
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 347 agtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgctcgc 288
Query: 458 agtgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatgagtg 517
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 287 agtgttgaaaggaactcatccttagggtcagctttcagatccttgttgattgcatgacca 228
Query: 518 aactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtgaga 577
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtgaga 168
Query: 578 attctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtattttg 637
|| || ||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||
Sbjct: 167 atcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaattttg 108
Query: 638 gcttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcactaaca 697
||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 107 gcttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcacttaca 48
Query: 698 agaggcactaaaagctttcggaagtcgccggtgacatgcgc 738
|||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 47 agaggcaccaacagcttgcggaagtcgccggtgacgtgcgc 7
>gb|AW678084.1|AW678084 WS1_13_H01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 432
Score = 656 bits (331), Expect = 0.0
Identities = 394/415 (94%)
Strand = Plus / Minus
Query: 748 ctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgc 807
|||||||||||| ||||| || ||||| ||||||||||||||| |||| |||||||||||
Sbjct: 432 ctcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgc 373
Query: 808 gggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgc 867
||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 372 gggggtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgc 313
Query: 868 ctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgc 927
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgt 253
Query: 928 cctctcgaacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccgtacgc 987
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 252 tctctcgaacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccgtacgc 193
Query: 988 ctcggcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggccaggatgga 1047
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 192 ctcggcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccaggatgga 133
Query: 1048 gatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcgcagtc 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 132 gatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcggcgtc 73
Query: 1108 ctcggcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtcggtt 1162
|||||||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 72 ctcggcgacggccgggacggaggaggggacggtgagggtcgccattgcgtcggtt 18
>gb|AW287406.2|AW287406 LG1_303_E07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 465
Score = 652 bits (329), Expect = 0.0
Identities = 392/413 (94%)
Strand = Plus / Minus
Query: 750 cctcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcgg 809
|||||||||| ||||| || ||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 465 cctcgagcgagcgcttgaagcggtcgtggtacgcctgcttgcccgcgaagagctgcgcgg 406
Query: 810 gcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgcct 869
| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 405 gggtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgcct 346
Query: 870 cctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgccc 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 345 cctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgttc 286
Query: 930 tctcgaacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccgtacgcct 989
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 285 tctcgaacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccgtacgcct 226
Query: 990 cggcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggccaggatggaga 1049
||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 225 cggcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccaggatggaga 166
Query: 1050 tgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcgcagtcct 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 165 tgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcggcgtcct 106
Query: 1110 cggcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtcggtt 1162
|||||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 105 cggcgacggccgggacggaggaggggacggtgagggtcgccattgcgtcggtt 53
>gb|AW744998.1|AW744998 LG1_385_B06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 652 bits (329), Expect = 0.0
Identities = 452/492 (91%), Gaps = 2/492 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 490 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 433
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 432 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 373
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 372 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 313
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 312 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 253
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 252 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 193
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 133
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 132 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 73
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtag 552
|| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 72 caaatccttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtag 13
Query: 553 ctgagctttgct 564
||||||||||||
Sbjct: 12 ctgagctttgct 1
>gb|CN134327.1|CN134327 OX1_25_E03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_E03_A002 5', mRNA sequence
Length = 436
Score = 652 bits (329), Expect = 0.0
Identities = 397/420 (94%)
Strand = Plus / Minus
Query: 743 acgtcctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagc 802
||||||||||||||||| ||||| || ||||| ||||||||| ||||| |||| ||||||
Sbjct: 428 acgtcctcctcgagcgagcgcttgaagcggtcgtggtacgcccgcttggccgcgaagagc 369
Query: 803 tgcgcgggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttc 862
|||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 368 tgcgcgggggtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttc 309
Query: 863 ttcgcctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatc 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttcgcctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatc 249
Query: 923 accgccctctcgaacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccg 982
|||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 248 accgttctctcgaacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccg 189
Query: 983 tacgcctcggcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggccagg 1042
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 188 tacgcctcggcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccagg 129
Query: 1043 atggagatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcg 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggagatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcg 69
Query: 1103 cagtcctcggcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtcggtt 1162
||||||||||||||||||||||||||| || | |||||| ||||||||||||||||||
Sbjct: 68 gcgtcctcggcgacggccgggacggaggagggganggtgagggtcgccattgcgtcggtt 9
>gb|BG053072.1|BG053072 RHIZ2_16_C07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 469
Score = 648 bits (327), Expect = 0.0
Identities = 426/459 (92%)
Strand = Plus / Minus
Query: 280 cagcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcgacctcggc 339
||||||||||||||| |||||||| ||||| ||| ||| ||||||||||||||||||||
Sbjct: 465 cagcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcgacctcggc 406
Query: 340 gcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaagagccag 399
||||||||||| |||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 405 gcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaagagccag 346
Query: 400 tcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcgcccgcag 459
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 345 tcgaatgactttcttgaagtatctgtcagggcaggtgaagcaccggatgatcgctcgcag 286
Query: 460 tgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcatgagtgaa 519
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 285 tgttgaaaggaactcatccttagggtcagctttcagatccttgttgattgcatgaccaaa 226
Query: 520 ctgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtggtgagaat 579
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtggtgagaat 166
Query: 580 tctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaagtattttggc 639
|| ||||||||||| |||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 165 cctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaagaattttggc 106
Query: 640 ttcagaatgagccaaagatgtgttcacctctgggccatcatagcggtacgcactaacaag 699
||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 105 ttcagaatgggccaaagacgtgttcacctctgggccatcatagcggtatgcacttacaag 46
Query: 700 aggcactaaaagctttcggaagtcgccggtgacatgcgc 738
|||||| || ||||| ||||||||||||||||| |||||
Sbjct: 45 aggcaccaacagcttgcggaagtcgccggtgacgtgcgc 7
>gb|BG103339.1|BG103339 RHIZ2_19_A03.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 444
Score = 648 bits (327), Expect = 0.0
Identities = 390/411 (94%)
Strand = Plus / Minus
Query: 752 tcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcgggc 811
|||||||| ||||| || ||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 444 tcgagcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgcgggg 385
Query: 812 gtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgcctcc 871
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 384 gtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgcctcc 325
Query: 872 tcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgccctc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 tcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgttctc 265
Query: 932 tcgaacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccgtacgcctcg 991
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 tcgaacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccgtacgcctcg 205
Query: 992 gcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggccaggatggagatg 1051
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 gcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccaggatggagatg 145
Query: 1052 atcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcgcagtcctcg 1111
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 144 atcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcggcgtcctcg 85
Query: 1112 gcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtcggtt 1162
|||||||||||| ||||||| || |||||||||||||||||||||||||||
Sbjct: 84 gcgacggccggggcggaggaggggacggtgagcgtcgccattgcgtcggtt 34
>gb|BG357829.1|BG357829 OV2_30_G08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 530
Score = 648 bits (327), Expect = 0.0
Identities = 390/411 (94%)
Strand = Plus / Minus
Query: 752 tcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaagagctgcgcgggc 811
|||||||| ||||| || ||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 530 tcgagcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaagagctgcgcgggg 471
Query: 812 gtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcgcctcc 871
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 470 gtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcgcctcc 411
Query: 872 tcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgccctc 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 410 tcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccgttctc 351
Query: 932 tcgaacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccgtacgcctcg 991
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 350 tcgaacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccgtacgcctcg 291
Query: 992 gcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggccaggatggagatg 1051
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 290 gcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccaggatggagatg 231
Query: 1052 atcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcgcagtcctcg 1111
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 230 atcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcggcgtcctcg 171
Query: 1112 gcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtcggtt 1162
|||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 170 gcgacggccgggacggaggaggggacggtgagggtcgccattgcgtcggtt 120
Score = 56.0 bits (28), Expect = 8e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1251 ccgcggtgcgcgcggggaacaggcgccgggag 1282
|||||||||||||||||||||| |||||||||
Sbjct: 59 ccgcggtgcgcgcggggaacagacgccgggag 28
>gb|CF761539.1|CF761539 DSAF1_77_E05.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_77_E05_A011 5', mRNA sequence
Length = 436
Score = 632 bits (319), Expect = e-179
Identities = 394/419 (94%)
Strand = Plus / Minus
Query: 320 agcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtg 379
||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||
Sbjct: 419 agcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctcatctgtg 360
Query: 380 cccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaag 439
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaag 300
Query: 440 caccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagctttcagatcc 499
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 299 caccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagctttcagatcc 240
Query: 500 ttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtagctgagct 559
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 239 ttgttgattgcatgaccgaactgatccttgtagttattgaatgttgcaagtagctgagct 180
Query: 560 ttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttcttatggatc 619
|||||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||
Sbjct: 179 ttgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagcctttttatggatc 120
Query: 620 ttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgggccatca 679
||||||||||| ||||||||||||||||| | |||||| |||||||||||||||||||||
Sbjct: 119 ttctcatgaagaattttggcttcagaatgggacaaagacgtgttcacctctgggccatca 60
Query: 680 tagcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgacatgcgc 738
|||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| |||||
Sbjct: 59 tagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgc 1
>gb|BG103167.1|BG103167 RHIZ2_19_A03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 459
Score = 624 bits (315), Expect = e-177
Identities = 417/451 (92%)
Strand = Plus / Minus
Query: 190 gagttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatc 249
|||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct: 451 gagttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatc 392
Query: 250 tctagttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagc 309
||||||||||||||| || |||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 391 tctagttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagc 332
Query: 310 ctcctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatc 369
||| ||| ||||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 331 ttcccctattagcttcaggtcgacctcggcgcgagacgttatgaccctggtgagagcatc 272
Query: 370 ctcatcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagg 429
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctcatctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagg 212
Query: 430 gcaggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagc 489
|||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 211 gcaggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttagggtcagc 152
Query: 490 tttcagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaag 549
||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||
Sbjct: 151 tttcagatccttgttgattgcatgaccaaactgatccctgtagttattgaatgttgcaag 92
Query: 550 tagctgagctttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagcctt 609
|||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 91 tagctgagctttgctccgagtggtgagaatcctgatgatctcctcgtcactgtaagcctt 32
Query: 610 cttatggatcttctcatgaagtattttggct 640
|||| ||||||||||||||| |||||||||
Sbjct: 31 tttatcgatcttctcatgaagaattttggct 1
>gb|CX623174.1|CX623174 GABR1_68_D09.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_68_D09_A002 3', mRNA sequence
Length = 478
Score = 595 bits (300), Expect = e-168
Identities = 432/475 (90%), Gaps = 2/475 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 473 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 416
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 415 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 356
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 355 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 296
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 295 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 236
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 235 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 176
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 116
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 115 ggtgaagcacccgatgatcgctcgcagtgttgaaaggaacccatccttggggtcagcttt 56
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgtagctattgaatgttgca 547
|| ||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 55 caaatccttgttgattgcatgaccaaactgatccttgtaattattgaatgttgca 1
>gb|BG103552.1|BG103552 RHIZ2_37_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 421
Score = 591 bits (298), Expect = e-167
Identities = 388/418 (92%)
Strand = Plus / Minus
Query: 213 ccgccccaaggagggcaagcataatatcctcataatctctagttgtatctttggccacag 272
||||||| | ||||||||| | |||||||||||||||||||||||||||||| || ||||
Sbjct: 421 ccgcccctatgagggcaaggagaatatcctcataatctctagttgtatctttagcaacag 362
Query: 273 cacgctccagcggcacactgtttctcttctgataagcctcctttatcagcttcaggtcga 332
|||| ||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||
Sbjct: 361 cacggtccagcggcacactgttcctcttctggtaagcttcccctattagcttcaggtcga 302
Query: 333 cctcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtgcccatgcctccaa 392
|||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 301 cctcggcgcgagtagttatgaccctggtgagagcatcctcatctgtgcccacgcctccaa 242
Query: 393 gagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaagcaccggatgatcg 182
Query: 453 cccgcagtgttgaaagaaactcatccttggggtcagctttcagatccttgttgattgcat 512
| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 ctcgcagtgttgaaaggaactcatccttagggtcagctttcagatccttgttgattgcat 122
Query: 513 gagtgaactgatccttgtagctattgaatgttgcaagtagctgagctttgctccgtgtgg 572
|| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaccaaactgatccttgtagttattgaatgttgcaagtagctgagctttgctccgtgtgg 62
Query: 573 tgagaattctaatgatctcctcatcactgtaagccttcttatggatcttctcatgaag 630
||||||| || ||||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 61 tgagaatcctgatgatctcctcgtcactgtaagcctttttatcgatcttctcatgaag 4
>gb|BG047850.1|BG047850 OV1_28_F01.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 413
Score = 587 bits (296), Expect = e-165
Identities = 341/356 (95%)
Strand = Plus / Minus
Query: 807 cgggcgtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtggctcttcttcg 866
|||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 412 cgggggtgcgcgcgcacgcgatctccaccagcgcgcggccgccggggtgccatttcttcg 353
Query: 867 cctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccg 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cctcctcgttcgccagcaccgcgtccctctccgcggggtccagcgtccacaggatcaccg 293
Query: 927 ccctctcgaacttgccgtggatctcgtcgccgagagcgcggagcagctccttcccgtacg 986
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 292 ttctctcgaacttgccgtggatctcgtcgccgagggcgcggagcagctccttcccgtacg 233
Query: 987 cctcggcgtagccgcggcggatcgcgcggcgctgcgcggcgttgcggtgggccaggatgg 1046
|||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 232 cctcggcgtacgcgcggcggatcgcgcggcgctgcgccgcgttgcggtgggccaggatgg 173
Query: 1047 agatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcgcagt 1106
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 172 agatgatcagcttctcgttggtgccccaaccttcgaaggccttgtggagctgctcggcgt 113
Query: 1107 cctcggcgacggccgggacggaggaaggaacggtgagcgtcgccattgcgtcggtt 1162
||||||||||||||||||||||||| || |||||||| ||||||||||||||||||
Sbjct: 112 cctcggcgacggccgggacggaggaggggacggtgagggtcgccattgcgtcggtt 57
>gb|AW677613.1|AW677613 DG1_8_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 585 bits (295), Expect = e-165
Identities = 418/458 (91%), Gaps = 2/458 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 456 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 399
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 398 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 339
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||| || |||||||||||
Sbjct: 338 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatctcttcataatctct 279
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 278 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 219
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 218 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 159
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 99
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 98 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 39
Query: 493 cagatccttgttgattgcatgagtgaactgatccttgt 530
|||||||||||||||||||||| |||||||||||||
Sbjct: 38 cagatccttgttgattgcatgaccaaactgatccttgt 1
>gb|BE358601.1|BE358601 DG1_30_E11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 563
Score = 573 bits (289), Expect = e-161
Identities = 376/405 (92%)
Strand = Plus / Minus
Query: 441 accggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagctttcagatcct 500
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 563 accggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagctttcagatcct 504
Query: 501 tgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtagctgagctt 560
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 503 tgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtagctgagctt 444
Query: 561 tgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttcttatggatct 620
||||||||||||||||||| || ||||||||||| |||||||||||||| |||| |||||
Sbjct: 443 tgctccgtgtggtgagaatcctgatgatctcctcgtcactgtaagcctttttatcgatct 384
Query: 621 tctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgggccatcat 680
|||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 383 tctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctctgggccatcat 324
Query: 681 agcggtacgcactaacaagaggcactaaaagctttcggaagtcgccggtgacatgcgcgg 740
||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| ||||| |
Sbjct: 323 agcggtatgcacttacaagaggcaccaacagcttgcggaagtcgccggtgacgtgcgccg 264
Query: 741 caacgtcctcctcgagcgatcgcttaaaccggtcatggtacgcctgcttgaccgcaaaga 800
| ||||||||||||||||| ||||| || ||||| ||||||||||||||| |||| ||||
Sbjct: 263 cgacgtcctcctcgagcgagcgcttgaagcggtcgtggtacgcctgcttggccgcgaaga 204
Query: 801 gctgcgcgggcgtgcgcgcgcacgcgatctccaccagcgcgcggc 845
|||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 203 gctgcgcgggggtgcgcgcgcacgcgatctccaccagcgcgcggc 159
Score = 258 bits (130), Expect = 1e-066
Identities = 148/154 (96%)
Strand = Plus / Minus
Query: 1009 cgcgcggcgctgcgcggcgttgcggtgggccaggatggagatgatcagcttctcgttggt 1068
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cgcgcggcgctgcgccgcgttgcggtgggccaggatggagatgatcagcttctcgttggt 107
Query: 1069 gccccaaccttcgaaggccttgtggagctgctcgcagtcctcggcgacggccgggacgga 1128
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 106 gccccaaccttcgaaggccttgtggagctgctcggcgtcctcggcgacggccgggacgga 47
Query: 1129 ggaaggaacggtgagcgtcgccattgcgtcggtt 1162
||| || |||||||| ||||||||||||||||||
Sbjct: 46 ggaggggacggtgagggtcgccattgcgtcggtt 13
>gb|BG053093.1|BG053093 RHIZ2_16_E07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 425
Score = 567 bits (286), Expect = e-160
Identities = 376/406 (92%)
Strand = Plus / Minus
Query: 320 agcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctcatcagtg 379
||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| |||
Sbjct: 406 agcttcaggtcgacctcggcgcgagtagttatgactctggtgagagcatcctcatctgtg 347
Query: 380 cccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggcaggtgaag 439
|||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 346 cccacgcctccaagagccagtcgaatgcctttctcaaagtatctgtcagggcaggtgaag 287
Query: 440 caccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagctttcagatcc 499
|||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 286 caccggatgatcgctcgcagtgttgaaaggaactcatccttagggtcagctttcagatcc 227
Query: 500 ttgttgattgcatgagtgaactgatccttgtagctattgaatgttgcaagtagctgagct 559
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 226 ttgttgattgcatgaccaaactgatccttgtagttattgaatgttgcaagtagctgagct 167
Query: 560 ttgctccgtgtggtgagaattctaatgatctcctcatcactgtaagccttcttatggatc 619
|||||||||||||||||||| || ||||| ||||| |||||||||||||| |||| ||||
Sbjct: 166 ttgctccgtgtggtgagaatcctgatgatatcctcgtcactgtaagcctttttatcgatc 107
Query: 620 ttctcatgaagtattttggcttcagaatgagccaaagatgtgttcacctctgggccatca 679
||||||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||
Sbjct: 106 ttctcatgaagaattttggcttcagaatgggccaaagacgtgttcacctttgggccatca 47
Query: 680 tagcggtacgcactaacaagaggcactaaaagctttcggaagtcgc 725
|||||||| ||||| ||||||||||| || ||||| ||||||||||
Sbjct: 46 tagcggtatgcacttacaagaggcaccaacagcttgcggaagtcgc 1
>gb|CW224969.1|CW224969 104_662_11204102_148_37205_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204102, DNA
sequence
Length = 632
Score = 565 bits (285), Expect = e-159
Identities = 393/428 (91%), Gaps = 2/428 (0%)
Strand = Plus / Minus
Query: 73 gcgctgctaatgcaggctacgtgttacaaatttattattattcaaaaccacggccatgtg 132
||||||||||||||||||| || |||||| |||||||| ||||||| ||| ||| |||
Sbjct: 604 gcgctgctaatgcaggctaggt--tacaaacttattattgttcaaaaacacaaccacgtg 547
Query: 133 gataccacgtcgatgcagttttttggccccatcaaacaagtaggagcagatgagatcgag 192
||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 546 tataccacatcgatgcagttttttgttcccatcaaacaaggaggagcagatgggatggag 487
Query: 193 ttgaggcacgcctcctcactccgccccaaggagggcaagcataatatcctcataatctct 252
||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||
Sbjct: 486 ttgaggcacgcctcctcactccgcccctaggagggcaaggagaatatcctcataatctct 427
Query: 253 agttgtatctttggccacagcacgctccagcggcacactgtttctcttctgataagcctc 312
|||||||||||| || |||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct: 426 agttgtatctttagcaacagcacggtccagcggcacactgttcctcttctggtaagcttc 367
Query: 313 ctttatcagcttcaggtcgacctcggcgcgagtagttacgaccctggtgaggtcatcctc 372
| ||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 366 ccctattagcttcaggtcgacctcggcgcgagtagttatgaccctggtgagagcatcctc 307
Query: 373 atcagtgcccatgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 432
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atctgtgcccacgcctccaagagccagtcgaatgactttctcgaagtatctgtcagggca 247
Query: 433 ggtgaagcaccggatgatcgcccgcagtgttgaaagaaactcatccttggggtcagcttt 492
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 246 ggtgaagcaccggatgatcgctcgcagtgttgaaaggaactcatccttggggtcagcttt 187
Query: 493 cagatcct 500
||||||||
Sbjct: 186 cagatcct 179
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 379,417
Number of Sequences: 832831
Number of extensions: 379417
Number of successful extensions: 103075
Number of sequences better than 0.5: 137
Number of HSP's better than 0.5 without gapping: 135
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 102756
Number of HSP's gapped (non-prelim): 253
length of query: 1286
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1266
effective length of database: 474,703,049
effective search space: 600974060034
effective search space used: 600974060034
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)