BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131584.2.4
(739 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU863933.1|BU863933 S034C10 Populus imbibed seed cDNA li... 119 2e-025
gb|CF230138.1|CF230138 PtaC0004C5C0505 Poplar cDNA library ... 119 2e-025
gb|CV275930.1|CV275930 WS0178.B21.1_B13 PTxD-NR-A-8 Populus... 119 2e-025
gb|CV283222.1|CV283222 WS0186.B21_M03 PTxD-IL-N-A-9 Populus... 119 2e-025
gb|DT497560.1|DT497560 WS01126.BR_N07 PT-P-FL-A-2 Populus t... 119 2e-025
gb|CV131695.1|CV131695 L3P04b12 Populus stem seasonal libra... 113 1e-023
gb|BU813745.1|BU813745 N014E11 Populus bark cDNA library Po... 111 4e-023
gb|BU815727.1|BU815727 N045F12 Populus bark cDNA library Po... 111 4e-023
gb|BU822586.1|BU822586 UB39BPF04 Populus tremula cambium cD... 111 4e-023
gb|BU823752.1|BU823752 UB56BPB07 Populus tremula cambium cD... 111 4e-023
gb|BU826471.1|BU826471 UK121TB01 Populus apical shoot cDNA ... 111 4e-023
gb|BU870921.1|BU870921 Q019H08 Populus flower cDNA library ... 111 4e-023
gb|BU874609.1|BU874609 Q069H11 Populus flower cDNA library ... 111 4e-023
gb|CK097117.1|CK097117 UB39BPF04.3pR Populus active cambium... 111 4e-023
gb|CK106934.1|CK106934 UB39BPF04.5pR Populus active cambium... 111 4e-023
gb|AJ775279.1|AJ775279 AJ775279 Populus euphratica shoot 3-... 111 4e-023
gb|CV242846.1|CV242846 WS02516.B21.1_D04 PT-MB-N-A-15 Popul... 111 4e-023
gb|CV250072.1|CV250072 WS01126.B21_E06 PT-P-FL-A-2 Populus ... 111 4e-023
gb|CV252914.1|CV252914 PX0019.B21.1_H21 PT-X-FL-A-1 Populus... 111 4e-023
gb|CV252970.1|CV252970 PX0019.B21.1_L03 PT-X-FL-A-1 Populus... 111 4e-023
gb|CV253009.1|CV253009 PX0019.B21.1_N11 PT-X-FL-A-1 Populus... 111 4e-023
gb|CV254330.1|CV254330 WS0224.B21_N16 PTxD-ICC-A-12 Populus... 111 4e-023
gb|CV260622.1|CV260622 WS02014.B21_J02 PTxN-IB-N-A-11 Popul... 111 4e-023
gb|CV262800.1|CV262800 WS0202.B21_I19 PTxN-IB-N-A-11 Populu... 111 4e-023
gb|CV282738.1|CV282738 WS0185.B21_H11 PTxD-IL-N-A-9 Populus... 111 4e-023
gb|DN484401.1|DN484401 I009P52.3pR Populus senescing leaves... 111 4e-023
gb|DN493808.1|DN493808 I009P52.5pR Populus senescing leaves... 111 4e-023
gb|DT478765.1|DT478765 WS02523.BR_L20 PT-MB-N-A-15 Populus ... 111 4e-023
gb|DT483847.1|DT483847 WS02523.B21_L20 PT-MB-N-A-15 Populus... 111 4e-023
gb|DT489965.1|DT489965 WS02543.B21_K18 PT-MB-N-A-15 Populus... 111 4e-023
gb|DT497366.1|DT497366 WS01126.BR_E06 PT-P-FL-A-2 Populus t... 111 4e-023
gb|DT500671.1|DT500671 PX0019.BR.1_H21 PT-X-FL-A-1 Populus ... 111 4e-023
gb|DT500891.1|DT500891 PX0019.BR_L03 PT-X-FL-A-1 Populus tr... 111 4e-023
gb|DT500926.1|DT500926 PX0019.BR_N11 PT-X-FL-A-1 Populus tr... 111 4e-023
gb|DT515395.1|DT515395 WS02427.B21_H04 PTxD-ICC-N-A-14 Popu... 111 4e-023
gb|AJ780036.1|AJ780036 AJ780036 Populus euphratica root 3-6... 107 6e-022
gb|CV250218.1|CV250218 WS01126.B21_N07 PT-P-FL-A-2 Populus ... 105 2e-021
gb|BU824716.1|BU824716 UB68DPB04 Populus tremula cambium cD... 103 9e-021
gb|BU828149.1|BU828149 K017P33P Populus apical shoot cDNA l... 103 9e-021
gb|BU866729.1|BU866729 S070A12 Populus imbibed seed cDNA li... 103 9e-021
gb|BU891920.1|BU891920 P057B03 Populus petioles cDNA librar... 103 9e-021
gb|CV241085.1|CV241085 WS02511.B21_C21 PT-MB-N-A-15 Populus... 103 9e-021
gb|CX657485.1|CX657485 PO02048B06 Poplar SC cDNA library Po... 103 9e-021
gb|BU817057.1|BU817057 UA12BPE04 Populus tremula cambium cD... 98 6e-019
gb|BU828772.1|BU828772 K028P48P Populus apical shoot cDNA l... 96 2e-018
gb|BU834377.1|BU834377 T060D03 Populus apical shoot cDNA li... 96 2e-018
gb|BU834761.1|BU834761 T065D03 Populus apical shoot cDNA li... 96 2e-018
gb|CK116521.1|CK116521 B013P31 Hybrid aspen plasmid library... 96 2e-018
gb|BU837098.1|BU837098 T094F04 Populus apical shoot cDNA li... 94 9e-018
gb|BU878440.1|BU878440 V047C04 Populus flower cDNA library ... 88 6e-016
gb|CV242394.1|CV242394 WS02514.B21.1_P02 PT-MB-N-A-15 Popul... 88 6e-016
gb|CV248326.1|CV248326 WS01120.B21_E20 PT-P-FL-A-2 Populus ... 84 9e-015
gb|BU830907.1|BU830907 T014F04 Populus apical shoot cDNA li... 72 3e-011
gb|BU861578.1|BU861578 S003H08 Populus imbibed seed cDNA li... 60 1e-007
gb|BU833058.1|BU833058 T041C12 Populus apical shoot cDNA li... 58 5e-007
gb|BU822445.1|BU822445 UB37DPG08 Populus tremula cambium cD... 48 5e-004
>gb|BU863933.1|BU863933 S034C10 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 551
Score = 119 bits (60), Expect = 2e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || ||||| ||||||||||| ||
Sbjct: 166 aagaatgaggaggaggaattcagcactgggccgctctctgtcctgatgatgagtgtcaaa 225
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 226 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 285
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 286 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 345
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 346 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 405
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 406 aaaatgttcctc 417
>gb|CF230138.1|CF230138 PtaC0004C5C0505 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 635
Score = 119 bits (60), Expect = 2e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 156 aagaatgaggaggaggaattcagcaccgggccgctctctgttctgatgatgagtgtcaaa 215
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 216 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 275
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| |||||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 276 gcatttgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 335
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 336 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 395
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 396 aaaatgttcctc 407
>gb|CV275930.1|CV275930 WS0178.B21.1_B13 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_B13 3', mRNA sequence
Length = 603
Score = 119 bits (60), Expect = 2e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 474 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 415
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 414 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 355
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| |||||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 354 gcatttgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 295
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 294 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 235
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 234 aaaatgttcctc 223
>gb|CV283222.1|CV283222 WS0186.B21_M03 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_M03 3', mRNA sequence
Length = 662
Score = 119 bits (60), Expect = 2e-025
Identities = 204/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 516 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 457
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 456 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 397
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| |||||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 396 gcatttgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 337
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 336 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 277
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 276 aaaatgttcctc 265
>gb|DT497560.1|DT497560 WS01126.BR_N07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_N07 5', mRNA sequence
Length = 695
Score = 119 bits (60), Expect = 2e-025
Identities = 204/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 133 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 192
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 193 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 252
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| |||||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 253 gcatttgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 312
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 313 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 372
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 373 aaaatgttcctc 384
>gb|CV131695.1|CV131695 L3P04b12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 607
Score = 113 bits (57), Expect = 1e-023
Identities = 207/257 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 183 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 242
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 243 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 302
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 303 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 362
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 363 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 422
Query: 442 aagatgttcctcagggg 458
|| ||||||||| ||||
Sbjct: 423 aaaatgttcctccgggg 439
>gb|BU813745.1|BU813745 N014E11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 615
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 140 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 199
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 200 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 259
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 260 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 319
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 320 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 379
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 380 aaaatgttcctc 391
>gb|BU815727.1|BU815727 N045F12 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 550
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 141 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 200
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 201 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 260
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 261 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 320
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 321 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 380
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 381 aaaatgttcctc 392
>gb|BU822586.1|BU822586 UB39BPF04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 477
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 158 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 217
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 218 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 277
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 278 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 337
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 338 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 397
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 398 aaaatgttcctc 409
>gb|BU823752.1|BU823752 UB56BPB07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 479
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 157 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 216
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 217 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 276
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 277 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 336
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 337 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 396
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 397 aaaatgttcctc 408
>gb|BU826471.1|BU826471 UK121TB01 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 598
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 158 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 217
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 218 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 277
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 278 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 337
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 338 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 397
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 398 aaaatgttcctc 409
>gb|BU870921.1|BU870921 Q019H08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 612
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 156 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 215
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 216 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 275
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 276 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 335
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 336 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 395
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 396 aaaatgttcctc 407
>gb|BU874609.1|BU874609 Q069H11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 649
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 170 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 229
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 230 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 289
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 290 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 349
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 350 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 409
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 410 aaaatgttcctc 421
>gb|CK097117.1|CK097117 UB39BPF04.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB39BPF04 3', mRNA sequence
Length = 550
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 392 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 333
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 332 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 273
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 272 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 213
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 212 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 153
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 152 aaaatgttcctc 141
>gb|CK106934.1|CK106934 UB39BPF04.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB39BPF04 5', mRNA sequence
Length = 481
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 160 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 219
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 220 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 279
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 280 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 339
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 340 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 399
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 400 aaaatgttcctc 411
>gb|AJ775279.1|AJ775279 AJ775279 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030E02F1, mRNA sequence
Length = 466
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 119 aagaatgaggaggaggaattcagcactgggccgctttctgttctgatgatgagtgtcaaa 178
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 179 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 238
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 239 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 298
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 299 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 358
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 359 aaaatgttcctc 370
>gb|CV242846.1|CV242846 WS02516.B21.1_D04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_D04 3', mRNA sequence
Length = 635
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 520 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 461
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 460 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 401
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 400 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 341
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 340 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 281
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 280 aaaatgttcctc 269
>gb|CV250072.1|CV250072 WS01126.B21_E06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_E06 3', mRNA sequence
Length = 542
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 444 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 385
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 384 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 325
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 324 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 265
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 264 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 205
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 204 aaaatgttcctc 193
>gb|CV252914.1|CV252914 PX0019.B21.1_H21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_H21 3', mRNA sequence
Length = 606
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 515 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 456
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 455 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 396
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 395 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 336
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 335 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 276
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 275 aaaatgttcctc 264
>gb|CV252970.1|CV252970 PX0019.B21.1_L03 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_L03 3', mRNA sequence
Length = 639
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 515 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 456
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 455 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 396
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 395 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 336
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 335 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 276
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 275 aaaatgttcctc 264
>gb|CV253009.1|CV253009 PX0019.B21.1_N11 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_N11 3', mRNA sequence
Length = 639
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 515 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 456
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 455 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 396
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 395 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 336
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 335 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 276
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 275 aaaatgttcctc 264
>gb|CV254330.1|CV254330 WS0224.B21_N16 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0224_N16 3', mRNA sequence
Length = 677
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 517 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 458
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 457 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 398
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 397 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 338
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 337 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 278
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 277 aaaatgttcctc 266
>gb|CV260622.1|CV260622 WS02014.B21_J02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02014_J02 3', mRNA sequence
Length = 598
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 474 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 415
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 414 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 355
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 354 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 295
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 294 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 235
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 234 aaaatgttcctc 223
>gb|CV262800.1|CV262800 WS0202.B21_I19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0202_I19 3', mRNA sequence
Length = 634
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 489 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 430
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 429 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 370
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 369 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 310
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 309 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 250
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 249 aaaatgttcctc 238
>gb|CV282738.1|CV282738 WS0185.B21_H11 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_H11 3', mRNA sequence
Length = 586
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 462 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 403
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 402 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 343
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 342 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 283
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 282 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 223
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 222 aaaatgttcctc 211
>gb|DN484401.1|DN484401 I009P52.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I009P52 3', mRNA sequence
Length = 594
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 558 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 499
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 498 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 439
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 438 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 379
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 378 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 319
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 318 aaaatgttcctc 307
>gb|DN493808.1|DN493808 I009P52.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I009P52 5', mRNA sequence
Length = 745
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 176 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 235
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 236 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 295
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 296 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 355
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 356 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 415
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 416 aaaatgttcctc 427
>gb|DT478765.1|DT478765 WS02523.BR_L20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_L20 5', mRNA sequence
Length = 610
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 122 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 181
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 182 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 241
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 242 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 301
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 302 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 361
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 362 aaaatgttcctc 373
>gb|DT483847.1|DT483847 WS02523.B21_L20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_L20 3', mRNA sequence
Length = 610
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 489 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 430
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 429 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 370
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 369 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 310
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 309 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 250
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 249 aaaatgttcctc 238
>gb|DT489965.1|DT489965 WS02543.B21_K18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_K18 3', mRNA sequence
Length = 628
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 510 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 451
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 450 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 391
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 390 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 331
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 330 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 271
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 270 aaaatgttcctc 259
>gb|DT497366.1|DT497366 WS01126.BR_E06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_E06 5', mRNA sequence
Length = 574
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 133 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 192
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 193 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 252
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 253 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 312
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 313 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 372
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 373 aaaatgttcctc 384
>gb|DT500671.1|DT500671 PX0019.BR.1_H21 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_H21 5', mRNA sequence
Length = 642
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 139 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 198
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 199 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 258
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 259 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 318
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 319 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 378
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 379 aaaatgttcctc 390
>gb|DT500891.1|DT500891 PX0019.BR_L03 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_L03
5', mRNA sequence
Length = 553
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 139 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 198
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 199 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 258
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 259 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 318
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 319 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 378
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 379 aaaatgttcctc 390
>gb|DT500926.1|DT500926 PX0019.BR_N11 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_N11
5', mRNA sequence
Length = 595
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 139 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 198
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 199 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 258
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 259 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 318
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 319 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 378
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 379 aaaatgttcctc 390
>gb|DT515395.1|DT515395 WS02427.B21_H04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_H04 3', mRNA sequence
Length = 743
Score = 111 bits (56), Expect = 4e-023
Identities = 203/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 592 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 533
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 532 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 473
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 472 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 413
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 412 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 353
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 352 aaaatgttcctc 341
>gb|AJ780036.1|AJ780036 AJ780036 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800011A06F1, mRNA sequence
Length = 578
Score = 107 bits (54), Expect = 6e-022
Identities = 201/250 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 163 aagaatgaggaggaggaattcagcactgggccgctttctgttctgatgatgagtgtcaaa 222
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 223 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 282
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 283 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 342
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 343 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 402
Query: 442 aagatgttcc 451
|| |||||||
Sbjct: 403 aaaatgttcc 412
>gb|CV250218.1|CV250218 WS01126.B21_N07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_N07 3', mRNA sequence
Length = 645
Score = 105 bits (53), Expect = 2e-021
Identities = 204/253 (80%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 564 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 505
Query: 262 aacaacaccc-aggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcg 320
|| || |||| |||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 504 aataataccccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgag 445
Query: 321 tgcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagat 380
|| |||||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 444 ggcatttgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggt 385
Query: 381 ccccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcag 440
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 384 gccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcag 325
Query: 441 taagatgttcctc 453
|| |||||||||
Sbjct: 324 caaaatgttcctc 312
>gb|BU824716.1|BU824716 UB68DPB04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 558
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 160 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 219
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || | || |||||||||||||||||||| ||||| ||||| |
Sbjct: 220 aataatacccaggtactaactaactgccgcaacaacaagaagcttcttggacgtgtgagg 279
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 280 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 339
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 340 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 399
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 400 aaaatgttcctc 411
>gb|BU828149.1|BU828149 K017P33P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 103 bits (52), Expect = 9e-021
Identities = 203/252 (80%), Gaps = 1/252 (0%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 142 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 201
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 202 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 261
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 262 gcattcgatcgacattgcaacatggttcttgaaaatgt-agggagatgtggactgaggtg 320
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 321 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 380
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 381 aaaatgttcctc 392
>gb|BU866729.1|BU866729 S070A12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 625
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 167 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 226
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 227 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 286
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 287 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 346
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 347 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 406
Query: 442 aagatgttcctc 453
| |||||||||
Sbjct: 407 gaaatgttcctc 418
>gb|BU891920.1|BU891920 P057B03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 628
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 156 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 215
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 216 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 275
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| | | |
Sbjct: 276 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactggggtg 335
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 336 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 395
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 396 aaaatgttcctc 407
>gb|CV241085.1|CV241085 WS02511.B21_C21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02511_C21 3', mRNA sequence
Length = 573
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Minus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 473 aagaatgaggaggaggaattcagcactggaccgctctctgttctgatgatgagtgtcaaa 414
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || ||||||| |||||||||||| ||||| ||||| |
Sbjct: 413 aataatacccaggtactaattaactgccgcagcaacaagaagcttcttggacgtgtgagg 354
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 353 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 294
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 293 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 234
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 233 aaaatgttcctc 222
>gb|CX657485.1|CX657485 PO02048B06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02048B06 5', mRNA sequence
Length = 538
Score = 103 bits (52), Expect = 9e-021
Identities = 202/252 (80%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || | ||||||||||| ||
Sbjct: 86 aagaatgaggaggaggaattcagcactgggccgctctctgttttgatgatgagtgtcaaa 145
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 146 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 205
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 206 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 265
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 266 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 325
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 326 aaaatgttcctc 337
>gb|BU817057.1|BU817057 UA12BPE04 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 417
Score = 97.6 bits (49), Expect = 6e-019
Identities = 201/252 (79%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 158 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 217
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||| ||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 218 aataatacccgggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 277
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| | ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 278 gcatncgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 337
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 338 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 397
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 398 aaaatgttcctc 409
>gb|BU828772.1|BU828772 K028P48P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 495
Score = 95.6 bits (48), Expect = 2e-018
Identities = 201/252 (79%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| |
Sbjct: 80 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcata 139
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 140 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 199
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | |||||||| || ||| |
Sbjct: 200 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtgtactgaggtg 259
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 260 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 319
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 320 aaaatgttcctc 331
>gb|BU834377.1|BU834377 T060D03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 559
Score = 95.6 bits (48), Expect = 2e-018
Identities = 201/252 (79%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 122 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 181
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 182 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 241
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || | | ||||||||||| |||
Sbjct: 242 gcattcgatcgacattgcaacatggttcttgaaaatgctagggagatgtggactgaggcg 301
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||||||||||
Sbjct: 302 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagattcatcagc 361
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 362 aaaatgttcctc 373
>gb|BU834761.1|BU834761 T065D03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 631
Score = 95.6 bits (48), Expect = 2e-018
Identities = 201/252 (79%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| |||| || || || || || || ||||||||||| ||
Sbjct: 157 aagaatgaggaggaggaattcggcactgggccgctctctgttctgatgatgagtgtcaaa 216
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 217 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 276
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 277 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 336
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| ||| ||| || ||||| ||||||||||||||
Sbjct: 337 ccaaaaactgggaaaggcaagaagaaaactcagccagtcaacaaagatagattcatcagc 396
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 397 aaaatgttcctc 408
>gb|CK116521.1|CK116521 B013P31 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B013P31 5', mRNA sequence
Length = 479
Score = 95.6 bits (48), Expect = 2e-018
Identities = 202/252 (80%), Gaps = 1/252 (0%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 128 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 187
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 188 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 247
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 248 gcattcgatcgacattgcaacatggttcttgaaaatgttagggagatgtggactgaggtg 307
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || ||||| || ||||| ||||| |||| ||| | ||||| ||||||||||||||
Sbjct: 308 ccaaaaactgggaaaggcaagaagaaagctcagccag-caacaaagatagattcatcagc 366
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 367 aaaatgttcctc 378
>gb|BU837098.1|BU837098 T094F04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 480
Score = 93.7 bits (47), Expect = 9e-018
Identities = 191/239 (79%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 168 aagaatgaggaggaggaattcagcactgggccgctctctgttctgatgatgagtgtcaaa 227
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| || || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 228 aataatacccaggtactaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 287
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| || ||||| || || |||||||| || || || || | ||||||||||| ||| |
Sbjct: 288 gcattcgatcgacattgcaacatggttcttgaaaatgtcagggagatgtggactgaggtg 347
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcag 440
|| || ||||| || ||||| ||||| |||| ||| || ||||| ||||||| ||||||
Sbjct: 348 ccaaaaactgggaaaggcaagaagaaagctcagccagtcaacaaagatagatccatcag 406
>gb|BU878440.1|BU878440 V047C04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 613
Score = 87.7 bits (44), Expect = 6e-016
Identities = 200/252 (79%)
Strand = Plus / Plus
Query: 202 aagaaagaggaggaggaatttagcacaggccctctgtcagtcctaatgatgagtgttaag 261
||||| |||||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 144 aagaacgaggaggaggaattcagcactgggccactctctgttctgatgatgagtgtaaaa 203
Query: 262 aacaacacccaggtcctcatcaattgccgcaacaacaagaagctgcttggccgtgttcgt 321
|| || |||||||| | || || |||||||||||||||||||| ||||| ||||| |
Sbjct: 204 aataatacccaggtattaattaactgccgcaacaacaagaagcttcttggacgtgtgagg 263
Query: 322 gcttttgatcgccactgtaacatggtgctcgagaacgtgcgtgagatgtggacagagatc 381
|| |||||| | || || |||||||| || ||||| || | || |||||||| ||| |
Sbjct: 264 gcatttgatagacattgcaacatggttcttgagaatgtcagggaaatgtggactgaggtg 323
Query: 382 cccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcagt 441
|| || || || || ||||| ||||| |||| ||| || ||||| ||||| ||||||||
Sbjct: 324 ccaaaaaccgggaaaggcaagaagaaagctcagccagtcaacaaagataggttcatcagc 383
Query: 442 aagatgttcctc 453
|| |||||||||
Sbjct: 384 aaaatgttcctc 395
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 92,434
Number of Sequences: 369679
Number of extensions: 92434
Number of successful extensions: 24672
Number of sequences better than 0.5: 56
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24562
Number of HSP's gapped (non-prelim): 61
length of query: 739
length of database: 203,408,664
effective HSP length: 19
effective length of query: 720
effective length of database: 196,384,763
effective search space: 141397029360
effective search space used: 141397029360
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)