BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2907809.2.1
(614 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW290204.1|AW290204 NXNV015F01F Nsf Xylem Normal wood Ve... 74 7e-012
gb|AW290283.1|AW290283 NXNV017E08F Nsf Xylem Normal wood Ve... 74 7e-012
gb|AL750053.1|AL750053 AL750053 AS Pinus pinaster cDNA clon... 74 7e-012
gb|BX253341.1|BX253341 BX253341 Pinus pinaster differenciat... 74 7e-012
gb|BX254897.1|BX254897 BX254897 Pinus pinaster differenciat... 74 7e-012
gb|BX255469.1|BX255469 BX255469 Pinus pinaster differenciat... 74 7e-012
gb|AW784112.1|AW784112 NXNV_117_H11_F Nsf Xylem Normal wood... 74 7e-012
gb|BF777301.1|BF777301 NXSI_067_E08_F NXSI (Nsf Xylem Side ... 74 7e-012
gb|BG041028.1|BG041028 NXSI_117_G12_F NXSI (Nsf Xylem Side ... 74 7e-012
gb|BQ702501.1|BQ702501 NXSI_129_D02_F NXSI (Nsf Xylem Side ... 74 7e-012
gb|CD026868.1|CD026868 NXNV015F01 Nsf Xylem Normal wood Ver... 74 7e-012
gb|CD026919.1|CD026919 NXNV017E08 Nsf Xylem Normal wood Ver... 74 7e-012
gb|CF395509.1|CF395509 RTDS2_12_E02.b1_A021 Drought-stresse... 74 7e-012
gb|CF395603.1|CF395603 RTDS2_12_E02.g1_A021 Drought-stresse... 74 7e-012
gb|CF397709.1|CF397709 RTDS3_1_E10.b2_A022 Drought-stressed... 74 7e-012
gb|CF670905.1|CF670905 RTCNT1_53_H03.b1_A029 Root control P... 74 7e-012
gb|CF670979.1|CF670979 RTCNT1_53_H03.g1_A029 Root control P... 74 7e-012
gb|BX683032.1|BX683032 BX683032 Pinus pinaster differenciat... 74 7e-012
gb|BX784105.1|BX784105 BX784105 Pinus pinaster differenciat... 74 7e-012
gb|CO160371.1|CO160371 FLD1_20_B12.g1_A029 Root flooded Pin... 74 7e-012
gb|CO161874.1|CO161874 FLD1_31_F01.g1_A029 Root flooded Pin... 74 7e-012
gb|CO163824.1|CO163824 FLD1_44_B07.b1_A029 Root flooded Pin... 74 7e-012
gb|CO164148.1|CO164148 FLD1_46_D06.b1_A029 Root flooded Pin... 74 7e-012
gb|CO164222.1|CO164222 FLD1_46_D06.g1_A029 Root flooded Pin... 74 7e-012
gb|CO165879.1|CO165879 FLD1_57_F05.g1_A029 Root flooded Pin... 74 7e-012
gb|CO166149.1|CO166149 FLD1_59_E04.g1_A029 Root flooded Pin... 74 7e-012
gb|CO170935.1|CO170935 NDL1_17_H11.g1_A029 Needles control ... 74 7e-012
gb|CO196919.1|CO196919 GEO1_2_C11.g1_A029 Root gravitropism... 74 7e-012
gb|DN453025.1|DN453025 EST948824 Sequencing ESTs from loblo... 74 7e-012
gb|DN612026.1|DN612026 EST965076 Subtracted pine embryo lib... 74 7e-012
gb|DN612056.1|DN612056 EST965106 Subtracted pine embryo lib... 74 7e-012
gb|DN612387.1|DN612387 EST965437 Subtracted pine embryo lib... 74 7e-012
gb|DN615021.1|DN615021 EST968071 Subtracted pine embryo lib... 74 7e-012
gb|DN627086.1|DN627086 EST977902 Subtracted pine embryo lib... 74 7e-012
gb|DN632932.1|DN632932 EST983748 Subtracted pine embryo lib... 74 7e-012
gb|DN633401.1|DN633401 EST984217 Subtracted pine embryo lib... 74 7e-012
gb|DR012626.1|DR012626 HEAT1_14_B09.b1_A029 Root at 37 C fo... 74 7e-012
gb|DR012706.1|DR012706 HEAT1_14_B09.g1_A029 Root at 37 C fo... 74 7e-012
gb|DR013522.1|DR013522 HEAT1_19_G06.g1_A029 Root at 37 C fo... 74 7e-012
gb|DR047515.1|DR047515 RTBOR1_1_C01.g1_A029 Roots plus adde... 74 7e-012
gb|DR048766.1|DR048766 RTBOR1_11_D03.b1_A029 Roots plus add... 74 7e-012
gb|DR048846.1|DR048846 RTBOR1_11_D03.g1_A029 Roots plus add... 74 7e-012
gb|DR049543.1|DR049543 RTBOR1_17_H05.b1_A029 Roots plus add... 74 7e-012
gb|DR049615.1|DR049615 RTBOR1_17_H05.g1_A029 Roots plus add... 74 7e-012
gb|DR049682.1|DR049682 RTBOR1_18_H05.b1_A029 Roots plus add... 74 7e-012
gb|DR049759.1|DR049759 RTBOR1_18_H05.g1_A029 Roots plus add... 74 7e-012
gb|DR055038.1|DR055038 RTCA1_21_D10.b1_A029 Roots minus cal... 74 7e-012
gb|DR055114.1|DR055114 RTCA1_21_D10.g2_A029 Roots minus cal... 74 7e-012
gb|DR055813.1|DR055813 RTCA1_26_C08.b1_A029 Roots minus cal... 74 7e-012
gb|DR056289.1|DR056289 RTCA1_29_G05.b1_A029 Roots minus cal... 74 7e-012
gb|DR056990.1|DR056990 RTNIT1_1_H01.g1_A029 Roots minus nit... 74 7e-012
gb|DR089510.1|DR089510 RTAL1_9_D09.b1_A029 Roots plus added... 74 7e-012
gb|DR089589.1|DR089589 RTAL1_9_D09.g1_A029 Roots plus added... 74 7e-012
gb|DR120936.1|DR120936 RTMG1_1_D02.b1_A029 Roots minus magn... 74 7e-012
gb|DR116604.1|DR116604 RTMG1_1_D02.g1_A029 Roots minus magn... 74 7e-012
gb|DR119458.1|DR119458 RTMG1_23_H07.b1_A029 Roots minus mag... 74 7e-012
gb|DR119498.1|DR119498 RTMG1_23_D07.g1_A029 Roots minus mag... 74 7e-012
gb|DR119543.1|DR119543 RTMG1_23_H07.g1_A029 Roots minus mag... 74 7e-012
gb|DR385356.1|DR385356 RTHG1_8_E03.b1_A029 Roots plus added... 74 7e-012
gb|DR385439.1|DR385439 RTHG1_8_E03.g1_A029 Roots plus added... 74 7e-012
gb|DR742300.1|DR742300 RTCU1_3_D04.b1_A029 Roots plus added... 74 7e-012
gb|DR742745.1|DR742745 RTCU1_6_E09.g2_A029 Roots plus added... 74 7e-012
gb|DR743632.1|DR743632 RTCU1_17_E02.b1_A029 Roots plus adde... 74 7e-012
gb|DR743705.1|DR743705 RTCU1_17_E02.g1_A029 Roots plus adde... 74 7e-012
gb|DT625058.1|DT625058 EST1159333 Sequencing ESTs from lobl... 74 7e-012
gb|BF220795.1|BF220795 NXCI_152_A10_F NXCI (Nsf Xylem Compr... 68 5e-010
gb|BF777166.1|BF777166 NXSI_066_A06_F NXSI (Nsf Xylem Side ... 68 5e-010
gb|BF778141.1|BF778141 NXSI_077_F05_F NXSI (Nsf Xylem Side ... 68 5e-010
gb|BQ701825.1|BQ701825 NXSI_121_A03_F NXSI (Nsf Xylem Side ... 68 5e-010
gb|DR165914.1|DR165914 RTPHOS1_8_D02.b1_A029 Roots minus ph... 68 5e-010
gb|DR165992.1|DR165992 RTPHOS1_8_D02.g1_A029 Roots minus ph... 68 5e-010
gb|CO160294.1|CO160294 FLD1_20_B12.b1_A029 Root flooded Pin... 66 2e-009
gb|DR013434.1|DR013434 HEAT1_19_G06.b1_A029 Root at 37 C fo... 66 2e-009
gb|BF777288.1|BF777288 NXSI_067_D06_F NXSI (Nsf Xylem Side ... 64 7e-009
gb|BG039983.1|BG039983 NXSI_104_D01_F NXSI (Nsf Xylem Side ... 60 1e-007
gb|BF518051.1|BF518051 NXSI_030_D11_F NXSI (Nsf Xylem Side ... 58 4e-007
gb|BQ698926.1|BQ698926 NXRV117_B11_F NXRV (Nsf Xylem Root w... 58 4e-007
gb|CF477588.1|CF477588 RTWW3_8_A07.g1_A022 Well-watered lob... 58 4e-007
gb|CO166083.1|CO166083 FLD1_59_E04.b1_A029 Root flooded Pin... 58 4e-007
gb|AA739705.1|AA739705 470 PtIFG2 Pinus taeda cDNA clone 87... 56 2e-006
gb|CO196864.1|CO196864 GEO1_2_C11.b1_A029 Root gravitropism... 48 4e-004
gb|DR047436.1|DR047436 RTBOR1_1_C01.b1_A029 Roots plus adde... 46 0.002
>gb|AW290204.1|AW290204 NXNV015F01F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV015F01 5', mRNA sequence
Length = 532
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 306 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 365
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 366 caaacattcatctgcac 382
>gb|AW290283.1|AW290283 NXNV017E08F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV017E08 5', mRNA sequence
Length = 353
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 59 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 118
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 119 caaacattcatctgcac 135
>gb|AL750053.1|AL750053 AL750053 AS Pinus pinaster cDNA clone AS05C05, mRNA sequence
Length = 696
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 279 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 338
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 339 caaacattcatctgcac 355
>gb|BX253341.1|BX253341 BX253341 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP081G03, mRNA sequence
Length = 440
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 75 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 134
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 135 caaacattcatctgcac 151
>gb|BX254897.1|BX254897 BX254897 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107A07, mRNA sequence
Length = 668
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 144 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 203
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 204 caaacattcatctgcac 220
>gb|BX255469.1|BX255469 BX255469 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP006B07, mRNA sequence
Length = 670
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 301 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 360
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 361 caaacattcatctgcac 377
>gb|AW784112.1|AW784112 NXNV_117_H11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_117_H11 5' similar to Arabidopsis thaliana
sequence At2g23090 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 502
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 85 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 144
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 145 caaacattcatctgcac 161
>gb|BF777301.1|BF777301 NXSI_067_E08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_067_E08 5' similar to Arabidopsis thaliana
sequence At2g23090 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 525
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 299 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 358
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 359 caaacattcatctgcac 375
>gb|BG041028.1|BG041028 NXSI_117_G12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_117_G12 5' similar to Arabidopsis thaliana
sequence At2g23090 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 573
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 306 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 365
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 366 caaacattcatctgcac 382
>gb|BQ702501.1|BQ702501 NXSI_129_D02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_129_D02 5' similar to Arabidopsis thaliana
sequence At2g23090 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 484
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 310 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 369
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 370 caaacattcatctgcac 386
>gb|CD026868.1|CD026868 NXNV015F01 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV015F01 5' similar to Arabidopsis thaliana sequence
At2g23090 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 532
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 306 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 365
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 366 caaacattcatctgcac 382
>gb|CD026919.1|CD026919 NXNV017E08 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV017E08 5' similar to Arabidopsis thaliana sequence
At2g23090 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 353
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 59 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 118
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 119 caaacattcatctgcac 135
>gb|CF395509.1|CF395509 RTDS2_12_E02.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_E02_A021 3', mRNA sequence
Length = 562
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 89 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 148
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 149 caaacattcatctgcac 165
>gb|CF395603.1|CF395603 RTDS2_12_E02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_E02_A021 5', mRNA sequence
Length = 763
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 311 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 370
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 371 caaacattcatctgcac 387
>gb|CF397709.1|CF397709 RTDS3_1_E10.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_E10_A022 3', mRNA sequence
Length = 704
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 498 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 439
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 438 caaacattcatctgcac 422
>gb|CF670905.1|CF670905 RTCNT1_53_H03.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_53_H03_A029 3', mRNA sequence
Length = 614
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 109 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 168
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 169 caaacattcatctgcac 185
>gb|CF670979.1|CF670979 RTCNT1_53_H03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_53_H03_A029 5', mRNA sequence
Length = 728
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 358 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 417
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 418 caaacattcatctgcac 434
>gb|BX683032.1|BX683032 BX683032 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 127C08, mRNA sequence
Length = 664
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 130 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 189
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 190 caaacattcatctgcac 206
>gb|BX784105.1|BX784105 BX784105 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 129B11, mRNA sequence
Length = 644
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 300 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 359
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 360 caaacattcatctgcac 376
>gb|CO160371.1|CO160371 FLD1_20_B12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_20_B12_A029 5', mRNA sequence
Length = 770
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 440 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 499
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 500 caaacattcatctgcac 516
>gb|CO161874.1|CO161874 FLD1_31_F01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_31_F01_A029 5', mRNA sequence
Length = 702
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 370 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 311
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 310 caaacattcatctgcac 294
>gb|CO163824.1|CO163824 FLD1_44_B07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_44_B07_A029 3', mRNA sequence
Length = 864
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 757 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 698
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 697 caaacattcatctgcac 681
>gb|CO164148.1|CO164148 FLD1_46_D06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_D06_A029 3', mRNA sequence
Length = 815
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 295 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 354
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 355 caaacattcatctgcac 371
>gb|CO164222.1|CO164222 FLD1_46_D06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_46_D06_A029 5', mRNA sequence
Length = 821
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 282 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 341
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 342 caaacattcatctgcac 358
>gb|CO165879.1|CO165879 FLD1_57_F05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_F05_A029 5', mRNA sequence
Length = 765
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 247 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 306
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 307 caaacattcatctgcac 323
>gb|CO166149.1|CO166149 FLD1_59_E04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_E04_A029 5', mRNA sequence
Length = 797
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 283 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 342
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 343 caaacattcatctgcac 359
>gb|CO170935.1|CO170935 NDL1_17_H11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_17_H11_A029 5', mRNA sequence
Length = 830
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 289 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 348
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 349 caaacattcatctgcac 365
>gb|CO196919.1|CO196919 GEO1_2_C11.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_2_C11_A029 5', mRNA sequence
Length = 789
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 376 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 435
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 436 caaacattcatctgcac 452
>gb|DN453025.1|DN453025 EST948824 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFO48 5' end, mRNA sequence
Length = 822
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 308 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 367
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 368 caaacattcatctgcac 384
>gb|DN612026.1|DN612026 EST965076 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAB979, mRNA sequence
Length = 681
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 340 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 399
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 400 caaacattcatctgcac 416
>gb|DN612056.1|DN612056 EST965106 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABA21, mRNA sequence
Length = 684
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 337 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 396
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 397 caaacattcatctgcac 413
>gb|DN612387.1|DN612387 EST965437 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABE88, mRNA sequence
Length = 684
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 337 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 396
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 397 caaacattcatctgcac 413
>gb|DN615021.1|DN615021 EST968071 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSACA90, mRNA sequence
Length = 684
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 337 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 396
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 397 caaacattcatctgcac 413
>gb|DN627086.1|DN627086 EST977902 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAE15, mRNA sequence
Length = 830
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 335 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 394
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 395 caaacattcatctgcac 411
>gb|DN632932.1|DN632932 EST983748 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACX36, mRNA sequence
Length = 788
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 335 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 394
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 395 caaacattcatctgcac 411
>gb|DN633401.1|DN633401 EST984217 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD490, mRNA sequence
Length = 823
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 321 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 380
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 381 caaacattcatctgcac 397
>gb|DR012626.1|DR012626 HEAT1_14_B09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_B09_A029 3', mRNA sequence
Length = 754
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 253 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 312
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 313 caaacattcatctgcac 329
>gb|DR012706.1|DR012706 HEAT1_14_B09.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_B09_A029 5', mRNA sequence
Length = 816
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 415 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 474
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 475 caaacattcatctgcac 491
>gb|DR013522.1|DR013522 HEAT1_19_G06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_G06_A029 5', mRNA sequence
Length = 681
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 311 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 370
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 371 caaacattcatctgcac 387
>gb|DR047515.1|DR047515 RTBOR1_1_C01.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_C01_A029 5', mRNA sequence
Length = 597
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 313 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 372
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 373 caaacattcatctgcac 389
>gb|DR048766.1|DR048766 RTBOR1_11_D03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_11_D03_A029 3', mRNA sequence
Length = 813
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 185 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 244
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 245 caaacattcatctgcac 261
>gb|DR048846.1|DR048846 RTBOR1_11_D03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_11_D03_A029 5', mRNA sequence
Length = 794
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 284 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 343
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 344 caaacattcatctgcac 360
>gb|DR049543.1|DR049543 RTBOR1_17_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_17_H05_A029 3', mRNA sequence
Length = 688
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 407 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 348
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 347 caaacattcatctgcac 331
>gb|DR049615.1|DR049615 RTBOR1_17_H05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_17_H05_A029 5', mRNA sequence
Length = 791
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 592 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 533
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 532 caaacattcatctgcac 516
>gb|DR049682.1|DR049682 RTBOR1_18_H05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_H05_A029 3', mRNA sequence
Length = 662
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 134 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 193
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 194 caaacattcatctgcac 210
>gb|DR049759.1|DR049759 RTBOR1_18_H05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_18_H05_A029 5', mRNA sequence
Length = 722
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 287 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 346
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 347 caaacattcatctgcac 363
>gb|DR055038.1|DR055038 RTCA1_21_D10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_D10_A029 3', mRNA sequence
Length = 737
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 130 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 189
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 190 caaacattcatctgcac 206
>gb|DR055114.1|DR055114 RTCA1_21_D10.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_D10_A029 5', mRNA sequence
Length = 643
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 283 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 342
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 343 caaacattcatctgcac 359
>gb|DR055813.1|DR055813 RTCA1_26_C08.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_C08_A029 3', mRNA sequence
Length = 743
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 268 aaaggcagtcaactggagacaaacaagaaggcaatgaatattcagtgcaaggtctgcatg 327
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 328 caaacattcatctgcac 344
>gb|DR056289.1|DR056289 RTCA1_29_G05.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_G05_A029 3', mRNA sequence
Length = 110
Score = 73.8 bits (37), Expect = 7e-012
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 193 aaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagatctgcatg 252
|||||||| || |||||| | ||||||||||| ||||| || ||||||||| ||||||||
Sbjct: 109 aaaggcagtcaactggagacaaacaagaaggcgatgaatattcagtgcaaggtctgcatg 50
Query: 253 cagaccttcatctgcac 269
|| || |||||||||||
Sbjct: 49 caaacattcatctgcac 33
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 70,964
Number of Sequences: 355925
Number of extensions: 70964
Number of successful extensions: 17421
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17262
Number of HSP's gapped (non-prelim): 159
length of query: 614
length of database: 217,277,237
effective HSP length: 19
effective length of query: 595
effective length of database: 210,514,662
effective search space: 125256223890
effective search space used: 125256223890
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)