BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576612.2.1
(845 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW011226.1|AW011226 ST18C02 Pine TriplEx shoot tip libra... 230 7e-059
gb|CF399744.1|CF399744 RTDS3_25_E10.g1_A022 Drought-stresse... 230 7e-059
gb|CF472091.1|CF472091 RTDS1_8_E12.g1_A015 Drought-stressed... 230 7e-059
gb|CF478324.1|CF478324 RTWW3_18_G01.g1_A022 Well-watered lo... 230 7e-059
gb|CF671496.1|CF671496 RTCNT1_57_A12.g1_A029 Root control P... 230 7e-059
gb|CF673041.1|CF673041 RTCNT1_75_D11.g1_A029 Root control P... 230 7e-059
gb|CO170092.1|CO170092 NDL1_11_D07.g1_A029 Needles control ... 230 7e-059
gb|CO174074.1|CO174074 NDL1_41_C01.g1_A029 Needles control ... 230 7e-059
gb|CO175730.1|CO175730 NDL1_56_D03.g1_A029 Needles control ... 230 7e-059
gb|CX646426.1|CX646426 COLD1_9_F11.b1_A029 Root cold Pinus ... 230 7e-059
gb|CX646508.1|CX646508 COLD1_9_F11.g1_A029 Root cold Pinus ... 230 7e-059
gb|DR024860.1|DR024860 STRS1_68_B06.b1_A034 Shoot tip pitch... 230 7e-059
gb|DR047783.1|DR047783 RTBOR1_3_B03.g1_A029 Roots plus adde... 230 7e-059
gb|DR048154.1|DR048154 RTBOR1_7_A02.b2_A029 Roots plus adde... 230 7e-059
gb|DR048230.1|DR048230 RTBOR1_7_A02.g2_A029 Roots plus adde... 230 7e-059
gb|DR050741.1|DR050741 RTBOR1_25_H11.b1_A029 Roots plus add... 230 7e-059
gb|DR050828.1|DR050828 RTBOR1_25_H11.g1_A029 Roots plus add... 230 7e-059
gb|DR055195.1|DR055195 RTCA1_22_E01.b1_A029 Roots minus cal... 230 7e-059
gb|DR071310.1|DR071310 RTDK1_19_C01.b1_A029 Roots, dark Pin... 230 7e-059
gb|DR071357.1|DR071357 RTDK1_19_G10.b1_A029 Roots, dark Pin... 230 7e-059
gb|DR071434.1|DR071434 RTDK1_19_G10.g1_A029 Roots, dark Pin... 230 7e-059
gb|DR081816.1|DR081816 RTFEPL1_32_C02.g1_A029 Roots plus ad... 230 7e-059
gb|DR093393.1|DR093393 STRR1_8_A12.b1_A033 Stem Response Re... 230 7e-059
gb|DR093470.1|DR093470 STRR1_8_A12.g1_A033 Stem Response Re... 230 7e-059
gb|DR095952.1|DR095952 STRR1_24_F02.g1_A033 Stem Response R... 230 7e-059
gb|DR096305.1|DR096305 STRR1_27_D06.b1_A033 Stem Response R... 230 7e-059
gb|DR096384.1|DR096384 STRR1_27_D06.g1_A033 Stem Response R... 230 7e-059
gb|DR097085.1|DR097085 STRR1_32_H10.b1_A033 Stem Response R... 230 7e-059
gb|DR097160.1|DR097160 STRR1_32_H10.g1_A033 Stem Response R... 230 7e-059
gb|DR168371.1|DR168371 RTPHOS1_25_B04.b1_A029 Roots minus p... 230 7e-059
gb|AW290009.1|AW290009 NXNV009E11F Nsf Xylem Normal wood Ve... 224 5e-057
gb|CD026677.1|CD026677 NXNV009E11 Nsf Xylem Normal wood Ver... 224 5e-057
gb|CO170011.1|CO170011 NDL1_11_D07.b1_A029 Needles control ... 224 5e-057
gb|DN634442.1|DN634442 EST985258 Subtracted pine embryo lib... 222 2e-056
gb|DR054561.1|DR054561 RTCA1_18_D03.b1_A029 Roots minus cal... 222 2e-056
gb|DR054640.1|DR054640 RTCA1_18_D03.g1_A029 Roots minus cal... 222 2e-056
gb|DR177584.1|DR177584 RTMNUT1_6_E02.b1_A029 Roots minus mi... 222 2e-056
gb|DR177664.1|DR177664 RTMNUT1_6_E02.g1_A029 Roots minus mi... 222 2e-056
gb|DR024937.1|DR024937 STRS1_68_B06.g1_A034 Shoot tip pitch... 220 7e-056
gb|DR047717.1|DR047717 RTBOR1_3_B03.b1_A029 Roots plus adde... 216 1e-054
gb|DR168441.1|DR168441 RTPHOS1_25_B04.g1_A029 Roots minus p... 216 1e-054
gb|CF471295.1|CF471295 RTDS1_2_C06.g1_A015 Drought-stressed... 214 4e-054
gb|CF667615.1|CF667615 RTCNT1_31_A11.g1_A029 Root control P... 214 4e-054
gb|CO168622.1|CO168622 NDL1_1_A01.g1_A029 Needles control P... 214 4e-054
gb|CO168631.1|CO168631 NDL1_1_B01.g1_A029 Needles control P... 214 4e-054
gb|CO172875.1|CO172875 NDL1_32_B02.g1_A029 Needles control ... 214 4e-054
gb|CO198415.1|CO198415 GEO1_13_B09.g1_A029 Root gravitropis... 214 4e-054
gb|DR059173.1|DR059173 RTNIT1_16_D06.b1_A029 Roots minus ni... 214 4e-054
gb|DR120261.1|DR120261 RTMG1_28_C05.g2_A029 Roots minus mag... 214 4e-054
gb|DR742407.1|DR742407 RTCU1_3_G04.g2_A029 Roots plus added... 214 4e-054
gb|CF667537.1|CF667537 RTCNT1_31_A11.b1_A029 Root control P... 212 2e-053
gb|AI812876.1|AI812876 22A4 Pine Lambda Zap Xylem library P... 210 7e-053
gb|BE209356.1|BE209356 NXNV_166_G07_F Nsf Xylem Normal wood... 210 7e-053
gb|BX249581.1|BX249581 BX249581 Pinus pinaster differenciat... 206 1e-051
gb|BX252086.1|BX252086 BX252086 Pinus pinaster differenciat... 206 1e-051
gb|BX675192.1|BX675192 BX675192 RN Pinus pinaster cDNA clon... 206 1e-051
gb|BX680586.1|BX680586 BX680586 RS Pinus pinaster cDNA clon... 206 1e-051
gb|DN631246.1|DN631246 EST982062 Subtracted pine embryo lib... 206 1e-051
gb|DR095762.1|DR095762 STRR1_23_A09.g1_A033 Stem Response R... 206 1e-051
gb|CD028439.1|CD028439 NXSI_119_A09_F NXSI (Nsf Xylem Side ... 202 2e-050
gb|CO174001.1|CO174001 NDL1_41_C01.b1_A029 Needles control ... 202 2e-050
gb|AL749762.1|AL749762 AL749762 AN Pinus pinaster cDNA clon... 200 7e-050
gb|AA556468.1|AA556468 323 Loblolly pine C Pinus taeda cDNA... 198 3e-049
gb|AI813166.1|AI813166 23G10 Pine Lambda Zap Xylem library ... 198 3e-049
gb|CF399664.1|CF399664 RTDS3_25_E10.b1_A022 Drought-stresse... 198 3e-049
gb|CF472067.1|CF472067 RTDS1_8_E12.b1_A015 Drought-stressed... 198 3e-049
gb|DR100624.1|DR100624 STRR1_66_A05.b1_A033 Stem Response R... 198 3e-049
gb|DT630716.1|DT630716 EST1155128 Subtracted pine embryo li... 198 3e-049
gb|BM133582.1|BM133582 NXLV_009_B03_F NXLV (Nsf Xylem Late ... 194 4e-048
gb|CR393636.1|CR393636 CR393636 RN Pinus pinaster cDNA clon... 194 4e-048
gb|BX252126.1|BX252126 BX252126 Pinus pinaster differenciat... 190 6e-047
gb|DN630864.1|DN630864 EST981680 Subtracted pine embryo lib... 190 6e-047
gb|DN634290.1|DN634290 EST985106 Subtracted pine embryo lib... 190 6e-047
gb|DT630221.1|DT630221 EST1154633 Subtracted pine embryo li... 190 6e-047
gb|BF609002.1|BF609002 NXSI_039_C06_F NXSI (Nsf Xylem Side ... 188 3e-046
gb|CR393515.1|CR393515 CR393515 RN Pinus pinaster cDNA clon... 186 1e-045
gb|DR081754.1|DR081754 RTFEPL1_32_C02.b1_A029 Roots plus ad... 184 4e-045
gb|AI812848.1|AI812848 20G11 Pine Lambda Zap Xylem library ... 182 2e-044
gb|DN631897.1|DN631897 EST982713 Subtracted pine embryo lib... 176 1e-042
gb|DR071388.1|DR071388 RTDK1_19_C01.g1_A029 Roots, dark Pin... 172 1e-041
gb|BX677193.1|BX677193 BX677193 RN Pinus pinaster cDNA clon... 168 2e-040
gb|DN633035.1|DN633035 EST983851 Subtracted pine embryo lib... 168 2e-040
gb|BG275388.1|BG275388 NXSI_141_A06_F NXSI (Nsf Xylem Side ... 165 4e-039
gb|BG317627.1|BG317627 NXPV_003_H12_F NXPV (Nsf Xylem Plani... 163 1e-038
gb|AW783947.1|AW783947 NXNV_096_A02_F Nsf Xylem Normal wood... 157 9e-037
gb|CO172803.1|CO172803 NDL1_32_B02.b1_A029 Needles control ... 157 9e-037
gb|BF518133.1|BF518133 NXSI_035_D08_F NXSI (Nsf Xylem Side ... 143 1e-032
gb|BX676866.1|BX676866 BX676866 RN Pinus pinaster cDNA clon... 131 5e-029
gb|BX676939.1|BX676939 BX676939 RN Pinus pinaster cDNA clon... 131 5e-029
gb|CR393446.1|CR393446 CR393446 RN Pinus pinaster cDNA clon... 131 5e-029
gb|DR059255.1|DR059255 RTNIT1_16_D06.g1_A029 Roots minus ni... 125 3e-027
gb|BX254513.1|BX254513 BX254513 Pinus pinaster differenciat... 123 1e-026
gb|BQ699594.1|BQ699594 NXRV124_C10_F NXRV (Nsf Xylem Root w... 123 1e-026
gb|CF391176.1|CF391176 RTDR3_4_H03.b1_A022 Loblolly pine ro... 123 1e-026
gb|CF391211.1|CF391211 RTDR3_4_H03.g1_A022 Loblolly pine ro... 123 1e-026
gb|CF474315.1|CF474315 RTWW2_20_E08.b1_A021 Well-watered lo... 123 1e-026
gb|CF474458.1|CF474458 RTWW2_20_E08.g1_A021 Well-watered lo... 123 1e-026
gb|CF475279.1|CF475279 RTWW2_13_A11.b1_A021 Well-watered lo... 123 1e-026
gb|CF475331.1|CF475331 RTWW2_13_A11.g1_A021 Well-watered lo... 123 1e-026
gb|CF476078.1|CF476078 RTWW2_16_A01.g1_A021 Well-watered lo... 123 1e-026
gb|DR024686.1|DR024686 STRS1_66_G03.g1_A034 Shoot tip pitch... 123 1e-026
gb|DR060513.1|DR060513 RTNIT1_28_G06.b1_A029 Roots minus ni... 123 1e-026
gb|DR050985.1|DR050985 RTBOR1_27_A06.b1_A029 Roots plus add... 121 5e-026
gb|CF671649.1|CF671649 RTCNT1_58_H11.b1_A029 Root control P... 119 2e-025
gb|DR093799.1|DR093799 STRR1_10_B05.g1_A033 Stem Response R... 115 3e-024
gb|DR080737.1|DR080737 RTFEPL1_24_G10.g1_A029 Roots plus ad... 113 1e-023
gb|DR051063.1|DR051063 RTBOR1_27_A06.g1_A029 Roots plus add... 103 1e-020
gb|AW042785.1|AW042785 ST25D05 Pine TriplEx shoot tip libra... 100 2e-019
gb|BQ695862.1|BQ695862 NXPV_033_E05_F NXPV (Nsf Xylem Plani... 100 2e-019
gb|AW064562.1|AW064562 ST33A09 Pine TriplEx shoot tip libra... 94 1e-017
gb|CR393732.1|CR393732 CR393732 RN Pinus pinaster cDNA clon... 92 4e-017
gb|AW870206.1|AW870206 NXNV_125_E08_F Nsf Xylem Normal wood... 86 3e-015
gb|AL749551.1|AL749551 AL749551 AN Pinus pinaster cDNA clon... 78 7e-013
gb|CO167131.1|CO167131 FLD1_67_C01.b1_A029 Root flooded Pin... 68 6e-010
gb|CO167202.1|CO167202 FLD1_67_C01.g1_A029 Root flooded Pin... 68 6e-010
gb|DR743979.1|DR743979 RTCU1_19_A08.g1_A029 Roots plus adde... 68 6e-010
gb|BF516724.1|BF516724 NXSI_002_F03_F NXSI (Nsf Xylem Side ... 66 3e-009
gb|BQ699321.1|BQ699321 NXRV126_D05_F NXRV (Nsf Xylem Root w... 62 4e-008
gb|AW888060.1|AW888060 NXNV_126_G09_F Nsf Xylem Normal wood... 60 2e-007
gb|BQ701995.1|BQ701995 NXSI_123_B02_F NXSI (Nsf Xylem Side ... 58 6e-007
gb|BF609470.1|BF609470 NXSI_043_A03_F NXSI (Nsf Xylem Side ... 48 6e-004
gb|DR120185.1|DR120185 RTMG1_28_C05.b1_A029 Roots minus mag... 46 0.002
gb|BM158001.1|BM158001 NXLV_028_B11_F NXLV (Nsf Xylem Late ... 44 0.009
>gb|AW011226.1|AW011226 ST18C02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18C02, mRNA sequence
Length = 599
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 140 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 199
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 200 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 259
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 260 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 319
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 320 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 379
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 380 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 439
Query: 618 cctctgaa 625
||||||||
Sbjct: 440 cctctgaa 447
>gb|CF399744.1|CF399744 RTDS3_25_E10.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_25_E10_A022 5', mRNA sequence
Length = 654
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 215 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 274
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 275 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 334
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 335 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 394
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 395 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 454
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 455 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 514
Query: 618 cctctgaa 625
||||||||
Sbjct: 515 cctctgaa 522
>gb|CF472091.1|CF472091 RTDS1_8_E12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_8_E12_A015 5', mRNA sequence
Length = 746
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 199 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 258
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 259 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 318
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 319 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 378
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 379 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 438
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 439 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 498
Query: 618 cctctgaa 625
||||||||
Sbjct: 499 cctctgaa 506
>gb|CF478324.1|CF478324 RTWW3_18_G01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_18_G01_A022 5', mRNA sequence
Length = 736
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 206 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 265
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 266 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 325
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 326 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 385
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 386 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 445
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 446 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 505
Query: 618 cctctgaa 625
||||||||
Sbjct: 506 cctctgaa 513
>gb|CF671496.1|CF671496 RTCNT1_57_A12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_A12_A029 5', mRNA sequence
Length = 690
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 236 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 295
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 296 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 355
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 356 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 415
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 416 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 475
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 476 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 535
Query: 618 cctctgaa 625
||||||||
Sbjct: 536 cctctgaa 543
>gb|CF673041.1|CF673041 RTCNT1_75_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_D11_A029 5', mRNA sequence
Length = 789
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 221 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 280
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 281 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 340
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 341 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 400
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 401 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 460
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 461 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 520
Query: 618 cctctgaa 625
||||||||
Sbjct: 521 cctctgaa 528
>gb|CO170092.1|CO170092 NDL1_11_D07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_D07_A029 5', mRNA sequence
Length = 786
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 204 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 263
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 264 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 323
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 324 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 383
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 384 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 443
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 444 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 503
Query: 618 cctctgaa 625
||||||||
Sbjct: 504 cctctgaa 511
>gb|CO174074.1|CO174074 NDL1_41_C01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_41_C01_A029 5', mRNA sequence
Length = 708
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 184 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 243
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 244 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 303
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 304 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 363
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 364 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 423
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 424 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 483
Query: 618 cctctgaa 625
||||||||
Sbjct: 484 cctctgaa 491
>gb|CO175730.1|CO175730 NDL1_56_D03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_56_D03_A029 5', mRNA sequence
Length = 776
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 249 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 308
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 309 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 368
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 369 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 428
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 429 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 488
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 489 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 548
Query: 618 cctctgaa 625
||||||||
Sbjct: 549 cctctgaa 556
>gb|CX646426.1|CX646426 COLD1_9_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_F11_A029 3', mRNA sequence
Length = 811
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 196 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 255
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 256 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 315
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 316 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 375
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 376 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 435
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 436 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 495
Query: 618 cctctgaa 625
||||||||
Sbjct: 496 cctctgaa 503
>gb|CX646508.1|CX646508 COLD1_9_F11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_F11_A029 5', mRNA sequence
Length = 869
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 255 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 314
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 315 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 374
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 375 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 434
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 435 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 494
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 495 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 554
Query: 618 cctctgaa 625
||||||||
Sbjct: 555 cctctgaa 562
>gb|DR024860.1|DR024860 STRS1_68_B06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_B06_A034 3', mRNA sequence
Length = 611
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 6 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 65
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 66 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 125
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 126 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 185
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 186 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 245
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 246 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 305
Query: 618 cctctgaa 625
||||||||
Sbjct: 306 cctctgaa 313
>gb|DR047783.1|DR047783 RTBOR1_3_B03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_3_B03_A029 5', mRNA sequence
Length = 573
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 243 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 302
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 303 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 362
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 363 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 422
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 423 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 482
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 483 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 542
Query: 618 cctctgaa 625
||||||||
Sbjct: 543 cctctgaa 550
>gb|DR048154.1|DR048154 RTBOR1_7_A02.b2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_A02_A029 3', mRNA sequence
Length = 723
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 20 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 79
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 80 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 139
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 140 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 199
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 200 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 259
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 260 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 319
Query: 618 cctctgaa 625
||||||||
Sbjct: 320 cctctgaa 327
>gb|DR048230.1|DR048230 RTBOR1_7_A02.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_A02_A029 5', mRNA sequence
Length = 822
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 228 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 287
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 288 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 347
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 348 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 407
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 408 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 467
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 468 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 527
Query: 618 cctctgaa 625
||||||||
Sbjct: 528 cctctgaa 535
>gb|DR050741.1|DR050741 RTBOR1_25_H11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H11_A029 3', mRNA sequence
Length = 900
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 673 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 614
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 613 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 554
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 553 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 494
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 493 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 434
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 433 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 374
Query: 618 cctctgaa 625
||||||||
Sbjct: 373 cctctgaa 366
>gb|DR050828.1|DR050828 RTBOR1_25_H11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H11_A029 5', mRNA sequence
Length = 904
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 707 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 648
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 647 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 588
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 587 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 528
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 527 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 468
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 467 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 408
Query: 618 cctctgaa 625
||||||||
Sbjct: 407 cctctgaa 400
>gb|DR055195.1|DR055195 RTCA1_22_E01.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_22_E01_A029 3', mRNA sequence
Length = 749
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 522 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 463
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 462 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 403
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 402 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 343
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 342 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 283
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 282 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 223
Query: 618 cctctgaa 625
||||||||
Sbjct: 222 cctctgaa 215
>gb|DR071310.1|DR071310 RTDK1_19_C01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C01_A029 3', mRNA sequence
Length = 860
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 122 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 181
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 182 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 241
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 242 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 301
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 302 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 361
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 362 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 421
Query: 618 cctctgaa 625
||||||||
Sbjct: 422 cctctgaa 429
>gb|DR071357.1|DR071357 RTDK1_19_G10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G10_A029 3', mRNA sequence
Length = 772
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 225 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 284
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 285 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 344
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 345 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 404
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 405 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 464
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 465 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 524
Query: 618 cctctgaa 625
||||||||
Sbjct: 525 cctctgaa 532
>gb|DR071434.1|DR071434 RTDK1_19_G10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G10_A029 5', mRNA sequence
Length = 656
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 208 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 267
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 268 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 327
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 328 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 387
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 388 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 447
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 448 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 507
Query: 618 cctctgaa 625
||||||||
Sbjct: 508 cctctgaa 515
>gb|DR081816.1|DR081816 RTFEPL1_32_C02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_C02_A029 5', mRNA sequence
Length = 579
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 216 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 275
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 276 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 335
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 336 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 395
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 396 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 455
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 456 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 515
Query: 618 cctctgaa 625
||||||||
Sbjct: 516 cctctgaa 523
>gb|DR093393.1|DR093393 STRR1_8_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A12_A033 3', mRNA sequence
Length = 893
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 182 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 241
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 242 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 301
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 302 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 361
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 362 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 421
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 422 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 481
Query: 618 cctctgaa 625
||||||||
Sbjct: 482 cctctgaa 489
>gb|DR093470.1|DR093470 STRR1_8_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A12_A033 5', mRNA sequence
Length = 877
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 215 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 274
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 275 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 334
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 335 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 394
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 395 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 454
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 455 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 514
Query: 618 cctctgaa 625
||||||||
Sbjct: 515 cctctgaa 522
>gb|DR095952.1|DR095952 STRR1_24_F02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_24_F02_A033 5', mRNA sequence
Length = 727
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 195 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 254
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 255 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 314
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 315 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 374
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 375 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 434
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 435 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 494
Query: 618 cctctgaa 625
||||||||
Sbjct: 495 cctctgaa 502
>gb|DR096305.1|DR096305 STRR1_27_D06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_D06_A033 3', mRNA sequence
Length = 776
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 77 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 136
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 137 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 196
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 197 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 256
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 257 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 316
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 317 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 376
Query: 618 cctctgaa 625
||||||||
Sbjct: 377 cctctgaa 384
>gb|DR096384.1|DR096384 STRR1_27_D06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_D06_A033 5', mRNA sequence
Length = 784
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 126 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 185
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 186 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 245
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 246 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 305
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 306 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 365
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 366 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 425
Query: 618 cctctgaa 625
||||||||
Sbjct: 426 cctctgaa 433
>gb|DR097085.1|DR097085 STRR1_32_H10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_H10_A033 3', mRNA sequence
Length = 742
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 37 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 96
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 97 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 156
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 157 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 216
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 217 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 276
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 277 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 336
Query: 618 cctctgaa 625
||||||||
Sbjct: 337 cctctgaa 344
>gb|DR097160.1|DR097160 STRR1_32_H10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_H10_A033 5', mRNA sequence
Length = 678
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 168 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 227
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 228 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 287
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 288 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 347
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 348 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 407
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 408 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 467
Query: 618 cctctgaa 625
||||||||
Sbjct: 468 cctctgaa 475
>gb|DR168371.1|DR168371 RTPHOS1_25_B04.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_B04_A029 3', mRNA sequence
Length = 658
Score = 230 bits (116), Expect = 7e-059
Identities = 260/308 (84%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 439 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 380
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 379 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 320
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 319 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 260
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 259 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 200
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 199 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 140
Query: 618 cctctgaa 625
||||||||
Sbjct: 139 cctctgaa 132
>gb|AW290009.1|AW290009 NXNV009E11F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009E11 5', mRNA sequence
Length = 504
Score = 224 bits (113), Expect = 5e-057
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 57 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 116
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 117 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 176
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 177 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 236
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 237 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 296
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||| ||||| || |||||||| |||||||
Sbjct: 297 tataagccagttaagcatgggagacctggtatnggtgctacacactcctctaggtttatt 356
Query: 618 cctctgaa 625
||||||||
Sbjct: 357 cctctgaa 364
>gb|CD026677.1|CD026677 NXNV009E11 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009E11 5' similar to Arabidopsis thaliana sequence
At5g09510 ribosomal protein S15-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 504
Score = 224 bits (113), Expect = 5e-057
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 57 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 116
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 117 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 176
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 177 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 236
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 237 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 296
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||| ||||| || |||||||| |||||||
Sbjct: 297 tataagccagttaagcatgggagacctggtatnggtgctacacactcctctaggtttatt 356
Query: 618 cctctgaa 625
||||||||
Sbjct: 357 cctctgaa 364
>gb|CO170011.1|CO170011 NDL1_11_D07.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_D07_A029 3', mRNA sequence
Length = 649
Score = 224 bits (113), Expect = 5e-057
Identities = 248/293 (84%)
Strand = Plus / Plus
Query: 333 ggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgct 392
|||||||||||| |||| ||||| | |||||||||| || ||||||||| ||| |||
Sbjct: 11 ggtttgaagaggcagccaatggccttggtcaagaagctccgtaaggcgaaacgggaagct 70
Query: 393 cctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtcccc 452
|||| || ||||| ||||||||||| | ||||||||||| |||||||| ||||| ||
Sbjct: 71 cctgcaggtgagaaaccagagccagttagaacccatctccgtaacatgataattgttcct 130
Query: 453 gagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatc 512
||||||||||| |||||| ||||||| |||||||| ||||| ||||| |||||||| |||
Sbjct: 131 gagatgattggtagcattattggtgtttacaatgggaagacattcaatcaggttgaaatc 190
Query: 513 aagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaag 572
|||||||||||||||||||| ||||| |||||||| || ||||| || ||||| || |||
Sbjct: 191 aagcctgagatgattggccattatctggcagagttttctatttcgtataagccagttaag 250
Query: 573 cacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaa 625
|| ||||| || ||||||||||| || |||||||| ||||||| ||||||||
Sbjct: 251 catgggagacctggtattggtgctacacactcctctaggtttattcctctgaa 303
>gb|DN634442.1|DN634442 EST985258 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADM60, mRNA sequence
Length = 791
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 260 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 319
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 320 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 379
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 380 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 439
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 440 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 499
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| || || || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 500 tataaaccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 559
Query: 618 cctctgaa 625
||||||||
Sbjct: 560 cctctgaa 567
>gb|DR054561.1|DR054561 RTCA1_18_D03.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_D03_A029 3', mRNA sequence
Length = 774
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 62 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 121
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 122 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 181
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 182 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 241
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| |||||||||||||||| |||||| ||||| |||||||| || |||||
Sbjct: 242 aatcaggttgaaatcaagcctgagatgactggccattatctggcagagttttctatttcg 301
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 302 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 361
Query: 618 cctctgaa 625
||||||||
Sbjct: 362 cctctgaa 369
>gb|DR054640.1|DR054640 RTCA1_18_D03.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_18_D03_A029 5', mRNA sequence
Length = 746
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 199 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 258
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | ||||||||||| |||
Sbjct: 259 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaacccatctccgtaac 318
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 319 atgataattgttcctgagatgattggtagcattattggtgtttacaatgggaagacattc 378
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| |||||||||||||||| |||||| ||||| |||||||| || |||||
Sbjct: 379 aatcaggttgaaatcaagcctgagatgactggccattatctggcagagttttctatttcg 438
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 439 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 498
Query: 618 cctctgaa 625
||||||||
Sbjct: 499 cctctgaa 506
>gb|DR177584.1|DR177584 RTMNUT1_6_E02.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E02_A029 3', mRNA sequence
Length = 729
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| || |||||||||| || |||
Sbjct: 18 agaaggtttcagcgaggtttgaagaggcagccaatggccctggtcaagaagctccgtaag 77
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 78 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 137
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 138 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 197
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 198 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 257
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 258 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 317
Query: 618 cctctgaa 625
||||||||
Sbjct: 318 cctctgaa 325
>gb|DR177664.1|DR177664 RTMNUT1_6_E02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E02_A029 5', mRNA sequence
Length = 735
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| || |||||||||| || |||
Sbjct: 144 agaaggtttcagcgaggtttgaagaggcagccaatggccctggtcaagaagctccgtaag 203
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 204 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 263
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 264 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 323
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 324 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 383
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 384 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 443
Query: 618 cctctgaa 625
||||||||
Sbjct: 444 cctctgaa 451
>gb|DR024937.1|DR024937 STRS1_68_B06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_B06_A034 5', mRNA sequence
Length = 341
Score = 220 bits (111), Expect = 7e-056
Identities = 246/291 (84%)
Strand = Plus / Plus
Query: 335 tttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcc 394
|||||||||| |||| ||||| | |||||||||| || ||||||||| ||| |||||
Sbjct: 1 tttgaagaggcagccaatggccttggtcaagaagctccgtaaggcgaaacgggaagctcc 60
Query: 395 tgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccga 454
|| || ||||| ||||||||||| | ||||||||||| |||||||| ||||| || ||
Sbjct: 61 tgcaggtgagaaaccagagccagttagaacccatctccgtaacatgataattgttcctga 120
Query: 455 gatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaa 514
||||||||| |||||| ||||||| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 121 gatgattggtagcattattggtgtttacaatgggaagacattcaatcaggttgaaatcaa 180
Query: 515 gcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagca 574
|||||||||||||||||| ||||| |||||||| || ||||| || ||||| || |||||
Sbjct: 181 gcctgagatgattggccattatctggcagagttttctatttcgtataagccagttaagca 240
Query: 575 cgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaa 625
||||| || ||||||||||| || |||||||| ||||||| ||||||||
Sbjct: 241 tgggagacctggtattggtgctacacactcctctaggtttattcctctgaa 291
>gb|DR047717.1|DR047717 RTBOR1_3_B03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_3_B03_A029 3', mRNA sequence
Length = 705
Score = 216 bits (109), Expect = 1e-054
Identities = 226/265 (85%)
Strand = Plus / Plus
Query: 361 tcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtga 420
|||||||||| || ||||||||| ||| ||||||| || ||||| ||||||||||| |
Sbjct: 24 tcaagaagctccgtaaggcgaaacgggaagctcctgcaggtgagaaaccagagccagtta 83
Query: 421 agacccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtct 480
||||||||||| |||||||| ||||| || ||||||||||| |||||| ||||||| |
Sbjct: 84 gaacccatctccgtaacatgataattgttcctgagatgattggtagcattattggtgttt 143
Query: 481 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 540
||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 144 acaatgggaagacattcaatcaggttgaaatcaagcctgagatgattggccattatctgg 203
Query: 541 cagagttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgccactc 600
||||||| || ||||| || ||||| || ||||| ||||| || ||||||||||| || |
Sbjct: 204 cagagttttctatttcgtataagccagttaagcatgggagacctggtattggtgctacac 263
Query: 601 actcctcgcggtttatccctctgaa 625
||||||| ||||||| ||||||||
Sbjct: 264 actcctctaggtttattcctctgaa 288
>gb|DR168441.1|DR168441 RTPHOS1_25_B04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_B04_A029 5', mRNA sequence
Length = 639
Score = 216 bits (109), Expect = 1e-054
Identities = 226/265 (85%)
Strand = Plus / Minus
Query: 361 tcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtga 420
|||||||||| || ||||||||| ||| ||||||| || ||||| ||||||||||| |
Sbjct: 638 tcaagaagctccgtaaggcgaaacgggaagctcctgcaggtgagaaaccagagccagtta 579
Query: 421 agacccatctccgcaacatgatcattgtccccgagatgattgggagcattgttggtgtct 480
||||||||||| |||||||| ||||| || ||||||||||| |||||| ||||||| |
Sbjct: 578 gaacccatctccgtaacatgataattgttcctgagatgattggtagcattattggtgttt 519
Query: 481 acaatggcaagaccttcaaccaggttgagatcaagcctgagatgattggccactatcttg 540
||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 518 acaatgggaagacattcaatcaggttgaaatcaagcctgagatgattggccattatctgg 459
Query: 541 cagagttctccatttcctacaagccggtcaagcacgggaggcccggtattggtgccactc 600
||||||| || ||||| || ||||| || ||||| ||||| || ||||||||||| || |
Sbjct: 458 cagagttttctatttcgtataagccagttaagcatgggagacctggtattggtgctacac 399
Query: 601 actcctcgcggtttatccctctgaa 625
||||||| ||||||| ||||||||
Sbjct: 398 actcctctaggtttattcctctgaa 374
>gb|CF471295.1|CF471295 RTDS1_2_C06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_C06_A015 5', mRNA sequence
Length = 736
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 213 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 272
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 273 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 332
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 333 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 392
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 393 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 452
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 453 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 512
Query: 618 cctctgaa 625
||||||||
Sbjct: 513 cctctgaa 520
>gb|CF667615.1|CF667615 RTCNT1_31_A11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_31_A11_A029 5', mRNA sequence
Length = 743
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 233 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 292
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 293 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 352
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 353 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 412
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 413 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 472
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 473 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 532
Query: 618 cctctgaa 625
||||||||
Sbjct: 533 cctctgaa 540
>gb|CO168622.1|CO168622 NDL1_1_A01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_A01_A029 5', mRNA sequence
Length = 714
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 210 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 269
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 270 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 329
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 330 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 389
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 390 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 449
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 450 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 509
Query: 618 cctctgaa 625
||||||||
Sbjct: 510 cctctgaa 517
>gb|CO168631.1|CO168631 NDL1_1_B01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_B01_A029 5', mRNA sequence
Length = 586
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 212 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 271
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 272 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 331
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 332 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 391
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 392 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 451
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 452 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 511
Query: 618 cctctgaa 625
||||||||
Sbjct: 512 cctctgaa 519
>gb|CO172875.1|CO172875 NDL1_32_B02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_32_B02_A029 5', mRNA sequence
Length = 716
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| |||||| | |||||||||| || |||
Sbjct: 678 agaaggtttcagcgaggtttgaagaggcagccaatggcgttggtcaagaagctccgtaag 619
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| | ||||||||| | ||| ||||||| |||
Sbjct: 618 gcgaaacgggaagctcctgcaggtgagaaactagagccagttagaacctatctccgtaac 559
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| | ||||||||||| |||||| ||||||| |||||||| ||||| |||
Sbjct: 558 atgataattgttcttgagatgattggtagcattattggtgtttacaatgggaagacattc 499
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 498 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 439
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 438 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 379
Query: 618 cctctgaa 625
||||||||
Sbjct: 378 cctctgaa 371
>gb|CO198415.1|CO198415 GEO1_13_B09.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_13_B09_A029 5', mRNA sequence
Length = 690
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 151 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 210
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 211 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 270
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 271 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 330
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 331 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 390
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 391 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 450
Query: 618 cctctgaa 625
||||||||
Sbjct: 451 cctctgaa 458
>gb|DR059173.1|DR059173 RTNIT1_16_D06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_D06_A029 3', mRNA sequence
Length = 551
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 347 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 288
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 287 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 228
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 227 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 168
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 167 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 108
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 107 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 48
Query: 618 cctctgaa 625
||||||||
Sbjct: 47 cctctgaa 40
>gb|DR120261.1|DR120261 RTMG1_28_C05.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_C05_A029 5', mRNA sequence
Length = 530
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 165 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 224
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 225 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 284
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 285 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 344
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 345 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 404
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 405 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 464
Query: 618 cctctgaa 625
||||||||
Sbjct: 465 cctctgaa 472
>gb|DR742407.1|DR742407 RTCU1_3_G04.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_3_G04_A029 5', mRNA sequence
Length = 747
Score = 214 bits (108), Expect = 4e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
|||||||| ||| | |||||||||||| |||| ||||| | |||||||||| || |||
Sbjct: 206 agaaggtttcagcgaggtttgaagaggcagccaatggccttggtcaagaagctccgtaag 265
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaac 437
|||||| ||| ||||||| || ||||| ||||||||||| | || |||||||| |||
Sbjct: 266 gcgaaacgggaagctcctgcaggtgagaaaccagagccagttagaactcatctccgtaac 325
Query: 438 atgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttc 497
||||| ||||| || ||||||||||| |||||| |||| || |||||||| ||||| |||
Sbjct: 326 atgataattgttcctgagatgattggtagcattattggcgtttacaatgggaagacattc 385
Query: 498 aaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcc 557
|| |||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 386 aatcaggttgaaatcaagcctgagatgattggccattatctggcagagttttctatttcg 445
Query: 558 tacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatc 617
|| ||||| || ||||| ||||| || ||||||||||| || |||||||| |||||||
Sbjct: 446 tataagccagttaagcatgggagacctggtattggtgctacacactcctctaggtttatt 505
Query: 618 cctctgaa 625
||||||||
Sbjct: 506 cctctgaa 513
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 97,399
Number of Sequences: 355925
Number of extensions: 97399
Number of successful extensions: 22446
Number of sequences better than 0.5: 124
Number of HSP's better than 0.5 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22136
Number of HSP's gapped (non-prelim): 207
length of query: 845
length of database: 217,277,237
effective HSP length: 19
effective length of query: 826
effective length of database: 210,514,662
effective search space: 173885110812
effective search space used: 173885110812
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)