BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204272.2.1
(739 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB641393.1|CB641393 OSJNEb01A03.r OSJNEb Oryza sativa (j... 256 1e-065
gb|CB661902.1|CB661902 OSJNEd05F11.r OSJNEd Oryza sativa (j... 256 1e-065
gb|CB668681.1|CB668681 OSJNEd16K11.r OSJNEd Oryza sativa (j... 256 1e-065
gb|CB670940.1|CB670940 OSJNEe04E10.r OSJNEe Oryza sativa (j... 256 1e-065
gb|CB674069.1|CB674069 OSJNEe08P02.r OSJNEe Oryza sativa (j... 256 1e-065
dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA... 256 1e-065
gb|CB668680.1|CB668680 OSJNEd16K11.f OSJNEd Oryza sativa (j... 250 9e-064
gb|CB663307.1|CB663307 OSJNEd08B16.r OSJNEd Oryza sativa (j... 248 4e-063
gb|CB664093.1|CB664093 OSJNEd09J24.r OSJNEd Oryza sativa (j... 248 4e-063
gb|CB649773.1|CB649773 OSJNEb13O11.r OSJNEb Oryza sativa (j... 224 5e-056
gb|CB651549.1|CB651549 OSJNEb16I21.r OSJNEb Oryza sativa (j... 224 5e-056
gb|CB669652.1|CB669652 OSJNEe02E22.r OSJNEe Oryza sativa (j... 224 5e-056
gb|CB669722.1|CB669722 OSJNEe02G23.f OSJNEe Oryza sativa (j... 224 5e-056
gb|CB678078.1|CB678078 OSJNEe15K07.r OSJNEe Oryza sativa (j... 224 5e-056
dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA... 224 5e-056
dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA... 224 5e-056
gb|CB682404.1|CB682404 OSJNEf09L04.r OSJNEf Oryza sativa (j... 220 8e-055
gb|CB637203.1|CB637203 OSJNEa03H23.r OSJNEa Oryza sativa (j... 216 1e-053
gb|CB671345.1|CB671345 OSJNEe04O03.r OSJNEe Oryza sativa (j... 196 1e-047
gb|CX728064.1|CX728064 OSJNEd08P02.r OSJNEd Oryza sativa (j... 188 3e-045
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 167 1e-038
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 167 1e-038
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 167 1e-038
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 167 1e-038
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 167 1e-038
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 167 1e-038
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 167 1e-038
gb|CB682403.1|CB682403 OSJNEf09L04.f OSJNEf Oryza sativa (j... 163 2e-037
gb|CB663675.1|CB663675 OSJNEd08P02.f OSJNEd Oryza sativa (j... 159 3e-036
gb|CB645438.1|CB645438 OSJNEb07B22.r OSJNEb Oryza sativa (j... 157 1e-035
gb|D46199.1|D46199 RICS10723A Rice green shoot Oryza sativa... 155 4e-035
gb|CB673445.1|CB673445 OSJNEe07P13.r OSJNEe Oryza sativa (j... 151 6e-034
gb|CF277012.1|CF277012 14ETL--02-G05.b1 Rice etiolated leaf... 151 6e-034
gb|CB643141.1|CB643141 OSJNEb03K21.r OSJNEb Oryza sativa (j... 147 1e-032
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 145 4e-032
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 145 4e-032
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 145 4e-032
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
gb|CB671150.1|CB671150 OSJNEe04J07.r OSJNEe Oryza sativa (j... 143 2e-031
gb|CV732956.1|CV732956 FLO--07-K16.g1 Rice flower lambda ph... 131 6e-028
gb|CV732955.1|CV732955 FLO--07-K16.b1 Rice flower lambda ph... 125 4e-026
gb|CF323512.1|CF323512 HDN--04-A19.g1 OsHDAC1-overexpressin... 121 6e-025
gb|CB664092.1|CB664092 OSJNEd09J24.f OSJNEd Oryza sativa (j... 107 8e-021
gb|CB669692.1|CB669692 OSJNEe02F24.r OSJNEe Oryza sativa (j... 100 2e-018
gb|AQ050970.2|AQ050970 nbxb0004dD06r CUGI Rice BAC Library ... 90 2e-015
gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) c... 90 2e-015
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 90 2e-015
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 90 2e-015
emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromoso... 90 2e-015
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 90 2e-015
gb|CB637215.1|CB637215 OSJNEa03I10.r OSJNEa Oryza sativa (j... 88 8e-015
gb|CB637777.1|CB637777 OSJNEa04P09.r OSJNEa Oryza sativa (j... 88 8e-015
dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA... 84 1e-013
dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA... 84 1e-013
ref|XM_471515.1| Oryza sativa (japonica cultivar-group), p... 84 1e-013
dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA... 82 5e-013
gb|AU033169.1|AU033169 AU033169 Rice shoot Oryza sativa (ja... 80 2e-012
gb|CB637085.1|CB637085 OSJNEa03E01.r OSJNEa Oryza sativa (j... 80 2e-012
gb|CL521984.1|CL521984 SAL7C07 Flanking Sequence Tag of Ory... 76 3e-011
gb|AACV01023904.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
gb|AQ575769.1|AQ575769 nbxb0087L14f CUGI Rice BAC Library O... 72 5e-010
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 68 7e-009
gb|AACV01022286.1| Oryza sativa (japonica cultivar-group) c... 68 7e-009
gb|D23838.1|D23838 RICR0328A Rice root Oryza sativa (japoni... 66 3e-008
gb|CB637289.1|CB637289 OSJNEa03L09.f OSJNEa Oryza sativa (j... 64 1e-007
dbj|AK062199.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
gb|CB637693.1|CB637693 OSJNEa04L18.r OSJNEa Oryza sativa (j... 60 2e-006
dbj|AP005514.2| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AACV01004237.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 60 2e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|CB636966.1|CB636966 OSJNEa03A01.r OSJNEa Oryza sativa (j... 58 7e-006
gb|CF277013.1|CF277013 14ETL--02-G05.g1 Rice etiolated leaf... 52 4e-004
gb|AQ272630.1|AQ272630 nbxb0028E24r CUGI Rice BAC Library O... 48 0.007
gb|AQ840400.1|AQ840400 nbxb0058D16r CUGI Rice BAC Library O... 48 0.007
>gb|CB641393.1|CB641393 OSJNEb01A03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01A03 3', mRNA sequence
Length = 818
Score = 256 bits (129), Expect = 1e-065
Identities = 380/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 167 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 226
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 227 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 286
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 287 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 345
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 346 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 405
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 406 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 465
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 466 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 525
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 526 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 585
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 586 attgttgccaggagttaaatacaatggcgtctgggttccac 626
Score = 155 bits (78), Expect = 4e-035
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 684 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 743
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 744 ctacctgcatcacttctccaaacagc 769
>gb|CB661902.1|CB661902 OSJNEd05F11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05F11 3', mRNA sequence
Length = 810
Score = 256 bits (129), Expect = 1e-065
Identities = 380/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 154 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 213
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 214 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 273
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 274 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 332
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 333 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 392
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 393 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 452
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 453 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 512
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 513 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 572
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 573 attgttgccaggagttaaatacaatggcgtctgggttccac 613
Score = 155 bits (78), Expect = 4e-035
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 671 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 730
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 731 ctacctgcatcacttctccaaacagc 756
>gb|CB668681.1|CB668681 OSJNEd16K11.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16K11 3', mRNA sequence
Length = 772
Score = 256 bits (129), Expect = 1e-065
Identities = 380/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 159 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 218
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 219 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 278
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 279 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 337
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 338 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 397
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 398 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 457
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 458 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 517
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 518 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 577
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 578 attgttgccaggagttaaatacaatggcgtctgggttccac 618
>gb|CB670940.1|CB670940 OSJNEe04E10.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E10 3', mRNA sequence
Length = 787
Score = 256 bits (129), Expect = 1e-065
Identities = 380/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 154 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 213
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 214 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 273
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 274 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 332
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 333 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 392
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 393 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 452
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 453 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 512
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 513 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 572
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 573 attgttgccaggagttaaatacaatggcgtctgggttccac 613
Score = 155 bits (78), Expect = 4e-035
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 671 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 730
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 731 ctacctgcatcacttctccaaacagc 756
>gb|CB674069.1|CB674069 OSJNEe08P02.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P02 3', mRNA sequence
Length = 797
Score = 256 bits (129), Expect = 1e-065
Identities = 380/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 164 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 223
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 224 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 283
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 284 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 342
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 343 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 402
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 403 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 462
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 463 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 522
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 523 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 582
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 583 attgttgccaggagttaaatacaatggcgtctgggttccac 623
Score = 155 bits (78), Expect = 4e-035
Identities = 84/86 (97%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 740
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 741 ctacctgcatcacttctccaaacagc 766
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full
insert sequence
Length = 2272
Score = 256 bits (129), Expect = 1e-065
Identities = 380/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 2121 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 2062
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 2061 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 2002
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 2001 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 1943
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 1942 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 1883
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 1882 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 1823
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 1822 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 1763
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 1762 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 1703
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 1702 attgttgccaggagttaaatacaatggcgtctgggttccac 1662
Score = 155 bits (78), Expect = 4e-035
Identities = 84/86 (97%)
Strand = Plus / Minus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1604 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 1545
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 1544 ctacctgcatcacttctccaaacagc 1519
>gb|CB668680.1|CB668680 OSJNEd16K11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16K11 5', mRNA sequence
Length = 752
Score = 250 bits (126), Expect = 9e-064
Identities = 365/442 (82%), Gaps = 2/442 (0%)
Strand = Plus / Minus
Query: 211 ttggactgagccagggcgagatcgaacgagctgaaggagcgaggagccagcgtgacctgc 270
|||||||| || || || |||||||| ||| ||| ||| ||||||| |||||||| |||
Sbjct: 742 ttggactgggcaagcgcaagatcgaatgaggagaaagagtgaggagcaagcgtgacttgc 683
Query: 271 atctgctctgcagcattgctcagatcgctctttaccggcacaaccttggttgggttgctg 330
||||||||||| |||||| || | ||| || || || |||||||| | ||||| ||
Sbjct: 682 atctgctctgctgcattggaaagctggcttttgacaggaacaaccttattcgggttacta 623
Query: 331 aaggagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagc 389
|| ||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| ||
Sbjct: 622 aaagagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgc 564
Query: 390 gttgatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaa 449
||| | || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| ||
Sbjct: 563 gttaacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaa 504
Query: 450 gtttatgacctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgc 509
|||||| | ||||||||||| |||||| || || || |||||||| ||||| ||||| ||
Sbjct: 503 gtttataatctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgc 444
Query: 510 tgcaagtgaacctgagtagctggagctgattgtcgttggatggaacatagcaccactaga 569
||| || ||||| ||||||||||| ||||||| ||||||| ||||||||||| |||||
Sbjct: 443 tgccagagaaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctaga 384
Query: 570 ctcgcggaaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaa 629
|| |||||||| ||||||||||||||||| ||||| ||||| || ||||||||||| ||
Sbjct: 383 ttcacggaaaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaa 324
Query: 630 gacgattgcgtctgggttccac 651
|| || |||||||||||||||
Sbjct: 323 tacaatggcgtctgggttccac 302
Score = 139 bits (70), Expect = 2e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 107 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtaaacttc 48
Query: 710 ctctacctgcatcacctctccaaaca 735
|||||||| |||||| ||||||||||
Sbjct: 47 ctctacctacatcacttctccaaaca 22
>gb|CB663307.1|CB663307 OSJNEd08B16.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B16 3', mRNA sequence
Length = 838
Score = 248 bits (125), Expect = 4e-063
Identities = 380/461 (82%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 322 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 381
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 382 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 441
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 442 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 500
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 501 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 560
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 561 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 620
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 621 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 680
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 681 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 740
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 741 attgttgccaggagtt-aatacaatggcgtctgggttccac 780
>gb|CB664093.1|CB664093 OSJNEd09J24.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09J24 3', mRNA sequence
Length = 861
Score = 248 bits (125), Expect = 4e-063
Identities = 379/461 (82%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| || ||| ||| |
Sbjct: 199 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaagagaaagagtg 258
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 259 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 318
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 319 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 377
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 378 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 437
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 438 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 497
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 498 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 557
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 558 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagttccgt 617
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 618 attgttgccaggagttaaatacaatggcgtctgggttccac 658
Score = 147 bits (74), Expect = 1e-032
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 716 ctattcttctccagtccagtaaagaaagcagcttctgccaatgaagcaagtagacttcct 775
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 776 ctacctgcatcacttctccaaacagc 801
>gb|CB649773.1|CB649773 OSJNEb13O11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13O11 3', mRNA sequence
Length = 815
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 153 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 212
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 213 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 272
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 273 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 331
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 332 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 391
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 392 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 451
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 452 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 511
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 512 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 571
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 572 attgttgccaggagttaaatacaatggcgtctgggttccac 612
Score = 139 bits (70), Expect = 2e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 670 ctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcct 729
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 730 ctacctgcatcacttctccaaacagc 755
>gb|CB651549.1|CB651549 OSJNEb16I21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I21 3', mRNA sequence
Length = 821
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 154 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 213
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 214 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 273
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 274 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 332
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 333 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 392
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 393 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 452
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 453 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 512
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 513 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 572
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 573 attgttgccaggagttaaatacaatggcgtctgggttccac 613
Score = 139 bits (70), Expect = 2e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 671 ctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcct 730
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 731 ctacctgcatcacttctccaaacagc 756
>gb|CB669652.1|CB669652 OSJNEe02E22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02E22 3', mRNA sequence
Length = 819
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 293 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 352
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 353 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 412
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 413 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 471
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 472 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 531
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 532 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 591
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 592 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 651
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 652 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 711
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 712 attgttgccaggagttaaatacaatggcgtctgggttccac 752
>gb|CB669722.1|CB669722 OSJNEe02G23.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02G23 5', mRNA sequence
Length = 798
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 293 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 352
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 353 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 412
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 413 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 471
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 472 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 531
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 532 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 591
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 592 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 651
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 652 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 711
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 712 attgttgccaggagttaaatacaatggcgtctgggttccac 752
>gb|CB678078.1|CB678078 OSJNEe15K07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15K07 3', mRNA sequence
Length = 691
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 169 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 228
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 229 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 288
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 289 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 347
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 348 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 407
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 408 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 467
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 468 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 527
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 528 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 587
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 588 attgttgccaggagttaaatacaatggcgtctgggttccac 628
>dbj|AK061612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B06, full
insert sequence
Length = 926
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 613 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 554
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 553 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 494
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 493 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 435
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 434 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 375
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 374 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 315
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 314 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 255
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 254 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 195
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 194 attgttgccaggagttaaatacaatggcgtctgggttccac 154
Score = 139 bits (70), Expect = 2e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 96 ctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcct 37
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 36 ctacctgcatcacttctccaaacagc 11
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full
insert sequence
Length = 2285
Score = 224 bits (113), Expect = 5e-056
Identities = 376/461 (81%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 2127 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 2068
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 2067 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 2008
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 2007 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 1949
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 1948 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 1889
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 1888 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 1829
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 1828 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 1769
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 1768 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 1709
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggttccac 651
| || ||||||||||| || || || |||||||||||||||
Sbjct: 1708 attgttgccaggagttaaatacaatggcgtctgggttccac 1668
Score = 139 bits (70), Expect = 2e-030
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 1610 ctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcct 1551
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 1550 ctacctgcatcacttctccaaacagc 1525
>gb|CB682404.1|CB682404 OSJNEf09L04.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L04 3', mRNA sequence
Length = 804
Score = 220 bits (111), Expect = 8e-055
Identities = 341/415 (82%), Gaps = 2/415 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 387 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 446
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 447 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 506
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 507 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 565
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 566 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 625
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 626 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 685
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 686 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 745
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
| ||||||||||| ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 746 gaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggagt 800
>gb|CB637203.1|CB637203 OSJNEa03H23.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03H23 3', mRNA sequence
Length = 598
Score = 216 bits (109), Expect = 1e-053
Identities = 372/457 (81%), Gaps = 2/457 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 143 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 202
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 203 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 262
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 263 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 321
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 322 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 381
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 382 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 441
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 442 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 501
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgt 610
| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| || |
Sbjct: 502 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttccat 561
Query: 611 aatgctgccaggagttgaagacgattgcgtctgggtt 647
| || ||||||||||| || || || |||||||||||
Sbjct: 562 attgttgccaggagttaaatacaatggcgtctgggtt 598
>gb|CB671345.1|CB671345 OSJNEe04O03.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04O03 3', mRNA sequence
Length = 785
Score = 196 bits (99), Expect = 1e-047
Identities = 338/415 (81%), Gaps = 2/415 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 360 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 419
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 420 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 479
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 480 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 538
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 539 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 598
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 599 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 658
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 659 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaactggat 718
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
| ||||||||||| ||||| || | |||||| ||||||||||||||||| |||||
Sbjct: 719 gaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagt 773
>gb|CX728064.1|CX728064 OSJNEd08P02.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08P02 3', mRNA sequence
Length = 553
Score = 188 bits (95), Expect = 3e-045
Identities = 319/391 (81%), Gaps = 2/391 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 164 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 223
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 224 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 283
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| |||||
Sbjct: 284 aaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataacag 342
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 343 tggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgaggc 402
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 403 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 462
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| || ||||| ||||||||||| ||||||| ||||||
Sbjct: 463 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattggat 522
Query: 551 ggaacatagcaccactagactcgcggaaaag 581
| ||||||||||| ||||| || ||||||||
Sbjct: 523 gaaacatagcaccgctagattcacggaaaag 553
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Plus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 64416 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 64475
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 64476 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 64535
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 64536 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 64595
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 64596 cgtctgggttccacct 64611
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 64890 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 64949
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 64950 ctctacctgcatcacttctccaaacagc 64977
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 27035 cacctatttttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 27094
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 27095 cctttaccagcatc 27108
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 55948 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 56007
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 56008 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 56067
Query: 643 gggttcca 650
||||||||
Sbjct: 56068 gggttcca 56075
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 64209 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 64267
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 64268 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 64327
Query: 453 tat 455
|||
Sbjct: 64328 tat 64330
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 63955 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 64014
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 64015 aggagcaagcgtgacttgcatctgctctgctgcattg 64051
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||| ||| ||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 26516 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 26575
Query: 643 gggttcca 650
||||||||
Sbjct: 26576 gggttcca 26583
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 56541 aggaaagcagcttctgccaatgatgcaagaaggcttcc 56578
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Minus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 1364754 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1364695
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 1364694 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1364635
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 1364634 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1364575
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 1364574 cgtctgggttccacct 1364559
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Minus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1364280 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 1364221
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 1364220 ctctacctgcatcacttctccaaacagc 1364193
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1402135 cacctatttttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1402076
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1402075 cctttaccagcatc 1402062
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 1373222 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 1373163
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 1373162 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 1373103
Query: 643 gggttcca 650
||||||||
Sbjct: 1373102 gggttcca 1373095
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 1364961 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 1364903
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1364902 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1364843
Query: 453 tat 455
|||
Sbjct: 1364842 tat 1364840
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1365215 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1365156
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1365155 aggagcaagcgtgacttgcatctgctctgctgcattg 1365119
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||| ||| ||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 1402654 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1402595
Query: 643 gggttcca 650
||||||||
Sbjct: 1402594 gggttcca 1402587
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 1372629 aggaaagcagcttctgccaatgatgcaagaaggcttcc 1372592
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Plus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 15456 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 15515
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 15516 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 15575
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 15576 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 15635
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 15636 cgtctgggttccacct 15651
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 15930 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 15989
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 15990 ctctacctgcatcacttctccaaacagc 16017
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 6987 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 7046
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 7047 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 7106
Query: 643 gggttcca 650
||||||||
Sbjct: 7107 gggttcca 7114
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 15249 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 15307
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 15308 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 15367
Query: 453 tat 455
|||
Sbjct: 15368 tat 15370
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 7580 aggaaagcagcttctgccaatgatgcaagaaggcttcc 7617
Score = 52.0 bits (26), Expect = 4e-004
Identities = 81/98 (82%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagg-gcgagatcgaacgagctgaaggagc 250
||||||||| || || || |||||||| || ||| || |||||||| ||| ||| |||
Sbjct: 14994 tcacatctctgccacgagtttggactgggcaaggcgcaagatcgaatgaggagaaagagt 15053
Query: 251 gaggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 15054 taggagcaagcgtgacttgcatctgctctgctgcattg 15091
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Minus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 1289871 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1289812
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 1289811 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1289752
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 1289751 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1289692
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 1289691 cgtctgggttccacct 1289676
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Minus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1289397 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 1289338
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 1289337 ctctacctgcatcacttctccaaacagc 1289310
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1330289 cacctatttttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1330230
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1330229 cctttaccagcatc 1330216
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 1298340 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 1298281
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 1298280 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 1298221
Query: 643 gggttcca 650
||||||||
Sbjct: 1298220 gggttcca 1298213
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 1290078 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 1290020
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1290019 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1289960
Query: 453 tat 455
|||
Sbjct: 1289959 tat 1289957
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||| ||| ||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 1330808 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1330749
Query: 643 gggttcca 650
||||||||
Sbjct: 1330748 gggttcca 1330741
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 1297747 aggaaagcagcttctgccaatgatgcaagaaggcttcc 1297710
Score = 52.0 bits (26), Expect = 4e-004
Identities = 81/98 (82%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagg-gcgagatcgaacgagctgaaggagc 250
||||||||| || || || |||||||| || ||| || |||||||| ||| ||| |||
Sbjct: 1290333 tcacatctctgccacgagtttggactgggcaaggcgcaagatcgaatgaggagaaagagt 1290274
Query: 251 gaggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1290273 taggagcaagcgtgacttgcatctgctctgctgcattg 1290236
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Minus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 1289871 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1289812
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 1289811 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1289752
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 1289751 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1289692
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 1289691 cgtctgggttccacct 1289676
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Minus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1289397 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 1289338
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 1289337 ctctacctgcatcacttctccaaacagc 1289310
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1330289 cacctatttttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1330230
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1330229 cctttaccagcatc 1330216
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 1298340 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 1298281
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 1298280 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 1298221
Query: 643 gggttcca 650
||||||||
Sbjct: 1298220 gggttcca 1298213
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 1290078 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 1290020
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1290019 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1289960
Query: 453 tat 455
|||
Sbjct: 1289959 tat 1289957
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||| ||| ||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 1330808 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1330749
Query: 643 gggttcca 650
||||||||
Sbjct: 1330748 gggttcca 1330741
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 1297747 aggaaagcagcttctgccaatgatgcaagaaggcttcc 1297710
Score = 52.0 bits (26), Expect = 4e-004
Identities = 81/98 (82%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagg-gcgagatcgaacgagctgaaggagc 250
||||||||| || || || |||||||| || ||| || |||||||| ||| ||| |||
Sbjct: 1290333 tcacatctctgccacgagtttggactgggcaaggcgcaagatcgaatgaggagaaagagt 1290274
Query: 251 gaggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1290273 taggagcaagcgtgacttgcatctgctctgctgcattg 1290236
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Minus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 1364753 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1364694
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 1364693 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1364634
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 1364633 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1364574
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 1364573 cgtctgggttccacct 1364558
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Minus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1364279 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 1364220
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 1364219 ctctacctgcatcacttctccaaacagc 1364192
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1402134 cacctatttttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1402075
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1402074 cctttaccagcatc 1402061
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 1373221 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 1373162
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 1373161 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 1373102
Query: 643 gggttcca 650
||||||||
Sbjct: 1373101 gggttcca 1373094
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 1364960 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 1364902
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1364901 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1364842
Query: 453 tat 455
|||
Sbjct: 1364841 tat 1364839
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1365214 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1365155
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1365154 aggagcaagcgtgacttgcatctgctctgctgcattg 1365118
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||| ||| ||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 1402653 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1402594
Query: 643 gggttcca 650
||||||||
Sbjct: 1402593 gggttcca 1402586
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 1372628 aggaaagcagcttctgccaatgatgcaagaaggcttcc 1372591
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 167 bits (84), Expect = 1e-038
Identities = 168/196 (85%)
Strand = Plus / Minus
Query: 458 cctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagtg 517
|||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| || |
Sbjct: 1364753 cctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccagag 1364694
Query: 518 aacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgga 577
|||| ||||||||||| ||||||| ||||||| ||||||||||| ||||| || ||||
Sbjct: 1364693 aaccagagtagctggaagtgattgtaattggatgaaacatagcaccgctagattcacgga 1364634
Query: 578 aaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattg 637
|||| ||||||||||||||||| ||||| ||||| || ||||||||||| || || || |
Sbjct: 1364633 aaagagtctgcatccagtaactaggagttccgtattgttgccaggagttaaatacaatgg 1364574
Query: 638 cgtctgggttccacct 653
||||||||||||||||
Sbjct: 1364573 cgtctgggttccacct 1364558
Score = 159 bits (80), Expect = 3e-036
Identities = 86/88 (97%)
Strand = Plus / Minus
Query: 650 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttc 709
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1364279 acctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttc 1364220
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 1364219 ctctacctgcatcacttctccaaacagc 1364192
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||||| ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1402134 cacctatttttctccaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1402075
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1402074 cctttaccagcatc 1402061
Score = 71.9 bits (36), Expect = 5e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 523 gagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagc 582
||||||||||| ||||| | ||||||| | ||||||||| || || || ||||||
Sbjct: 1373221 gagtagctggaactgatcataattggatgaatcatagcaccgcttgattcacggaaatat 1373162
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||||||| ||||| ||||| || || || ||||||||||||||||| || || |||
Sbjct: 1373161 gtctgcatccaataactaggagttccatactgttgccaggagttgaagacaatcgcatct 1373102
Query: 643 gggttcca 650
||||||||
Sbjct: 1373101 gggttcca 1373094
Score = 69.9 bits (35), Expect = 2e-009
Identities = 103/123 (83%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| ||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 1364960 gagttctcatccatcacat-tgctggatgtgataacagtggcagttgatcccagtgcgtt 1364902
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1364901 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1364842
Query: 453 tat 455
|||
Sbjct: 1364841 tat 1364839
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1365214 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1365155
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1365154 aggagcaagcgtgacttgcatctgctctgctgcattg 1365118
Score = 63.9 bits (32), Expect = 1e-007
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 583 gtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtct 642
||||||| ||| ||||| |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct: 1402653 gtctgcacccaataactaggagtgccatactgctgccaggaattgaacacaattgcatct 1402594
Query: 643 gggttcca 650
||||||||
Sbjct: 1402593 gggttcca 1402586
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||||||||||||||||||||| |||||||| |||||
Sbjct: 1372628 aggaaagcagcttctgccaatgatgcaagaaggcttcc 1372591
>gb|CB682403.1|CB682403 OSJNEf09L04.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf09L04 5', mRNA sequence
Length = 752
Score = 163 bits (82), Expect = 2e-037
Identities = 178/210 (84%)
Strand = Plus / Minus
Query: 442 gacccgaagtttatgacctttactcttaggaagctgttctcggagtcctgccaggtaatc 501
||||| |||||||| | ||||||||||| |||||| | || || |||||||| |||||
Sbjct: 714 gacccaaagtttataatctttactcttaagaagctatattcagaatcctgccaagtaatt 655
Query: 502 gcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatggaacatagca 561
||||| ||||| || ||||| ||||||||||| ||||||| ||||||| |||||||||
Sbjct: 654 gcagatgctgccagagaaccagagtagctggaagtgattgtaattggatgaaacatagca 595
Query: 562 ccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgtaatgctgccag 621
|| ||||| || |||||||| ||||||||||||||||| ||||| ||||| || ||||||
Sbjct: 594 ccgctagattcacggaaaagagtctgcatccagtaactaggagttccgtattgttgccag 535
Query: 622 gagttgaagacgattgcgtctgggttccac 651
||||| || || || |||||||||||||||
Sbjct: 534 gagttaaatacaatggcgtctgggttccac 505
Score = 147 bits (74), Expect = 1e-032
Identities = 83/86 (96%)
Strand = Plus / Minus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 447 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 388
Query: 712 ctacctgcatcacctctccaaacagc 737
|||| |||||||| ||||||||||||
Sbjct: 387 ctacttgcatcacttctccaaacagc 362
>gb|CB663675.1|CB663675 OSJNEd08P02.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08P02 5', mRNA sequence
Length = 553
Score = 159 bits (80), Expect = 3e-036
Identities = 271/332 (81%), Gaps = 2/332 (0%)
Strand = Plus / Minus
Query: 251 gaggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggca 310
||||||| |||||||| ||||| |||||||| |||||| || | ||| || || || |
Sbjct: 331 gaggagcaagcgtgacttgcatatgctctgctgcattggaaagctggcttttgacaggaa 272
Query: 311 caaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaaca 369
||||||| | ||||| || || ||||| ||||||||||||| ||||| |||||| ||||
Sbjct: 271 caaccttattcgggttactaaaagagttctcatccatcacat-tgctggatgtgataaca 213
Query: 370 gtggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcagg 429
||||| ||||||||||| ||||| | || |||||| |||||| ||| ||||| || |||
Sbjct: 212 gtggcagttgatcccagtgcgttaacacgggcctgaagcccagttgcagagatcgtgagg 153
Query: 430 gtcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcc 489
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || |||
Sbjct: 152 ctcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcc 93
Query: 490 tgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttgga 549
|| || ||||| ||||| ||||| || ||||| ||||||||||| ||||||| |||||
Sbjct: 92 tggcaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgtaattgga 33
Query: 550 tggaacatagcaccactagactcgcggaaaag 581
|| ||||||||||| ||||| || ||||||||
Sbjct: 32 tgaaacatagcaccgctagattcacggaaaag 1
>gb|CB645438.1|CB645438 OSJNEb07B22.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07B22 3', mRNA sequence
Length = 657
Score = 157 bits (79), Expect = 1e-035
Identities = 371/463 (80%), Gaps = 4/463 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 155 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 214
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 215 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 274
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || || || ||||||||||||| ||||| |||||| |||||
Sbjct: 275 aaccttattcgggttactaaaagaattctcatccatcacat-tgctggatgtgataacag 333
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| ||||| | || |||||| |||||| || |||| || |||
Sbjct: 334 tggcagttgatcccagtgcgttaacacgggcctgaagcccagctgcaaagatcgtgaggc 393
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 394 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 453
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| | |||| || |||||||| ||||||| ||||||
Sbjct: 454 gccaagtaattgcagatgctgccaaacaaccagactagctggaagtgattgtaattggat 513
Query: 551 ggaacatagca-ccactagactcgcggaaaagcgtctgcatccagtaactgggag-tgcc 608
| |||||| || || ||||| || ||||||| |||||||||||||||| |||| | ||
Sbjct: 514 gaaacataacacccgctagattcacggaaaaaactctgcatccagtaactaggagttccc 573
Query: 609 gtaatgctgccaggagttgaagacgattgcgtctgggttccac 651
||| |||||||| ||||| || || || |||||||||||||||
Sbjct: 574 gtattgctgccacgagttaaatacaatggcgtctgggttccac 616
>gb|D46199.1|D46199 RICS10723A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 340
Score = 155 bits (78), Expect = 4e-035
Identities = 84/86 (97%)
Strand = Plus / Minus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 161 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcct 102
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 101 ctacctgcatcacttctccaaacagc 76
Score = 109 bits (55), Expect = 2e-021
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 545 ttggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggag 604
||||||| ||||||||||| ||||| || |||||||| ||||||||||||||||| ||||
Sbjct: 325 ttggatgaaacatagcaccgctagattcacggaaaagagtctgcatccagtaactaggag 266
Query: 605 tgccgtaatgctgccaggagttgaagacgattgcgtctgggttccac 651
| ||||| || ||||||||||| || || || |||||||||||||||
Sbjct: 265 ttccgtattgttgccaggagttaaatacaatggcgtctgggttccac 219
>gb|CB673445.1|CB673445 OSJNEe07P13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07P13 3', mRNA sequence
Length = 799
Score = 151 bits (76), Expect = 6e-034
Identities = 285/352 (80%), Gaps = 2/352 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 440 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 499
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 500 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 559
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 560 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 618
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 619 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 678
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 679 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 738
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgt 542
|||| ||||| ||||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 739 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgt 790
>gb|CF277012.1|CF277012 14ETL--02-G05.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-G05, mRNA sequence
Length = 552
Score = 151 bits (76), Expect = 6e-034
Identities = 82/84 (97%)
Strand = Plus / Minus
Query: 654 attcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcctct 713
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 344 attcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagtagacttcctct 285
Query: 714 acctgcatcacctctccaaacagc 737
||||||||||| ||||||||||||
Sbjct: 284 acctgcatcacttctccaaacagc 261
Score = 117 bits (59), Expect = 9e-024
Identities = 127/150 (84%)
Strand = Plus / Minus
Query: 502 gcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatggaacatagca 561
||||| ||||| || ||||| |||||||||| ||||||| ||||||| |||||||||
Sbjct: 552 gcagatgctgccagagaaccagagtagctgggagtgattgtaattggatgaaacatagca 493
Query: 562 ccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgtaatgctgccag 621
|| ||||| || |||||||| ||||||||||||||||| ||||| ||||| || || |||
Sbjct: 492 ccgctagattcacggaaaagagtctgcatccagtaactaggagttccgtattgttgncag 433
Query: 622 gagttgaagacgattgcgtctgggttccac 651
||||| || || || |||||||||||||||
Sbjct: 432 gagttaaatacaatggcgtctgggttccac 403
>gb|CB643141.1|CB643141 OSJNEb03K21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03K21 3', mRNA sequence
Length = 766
Score = 147 bits (74), Expect = 1e-032
Identities = 322/402 (80%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 251 gaggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggca 310
||||||| |||| ||| |||||||||||||| |||||| || | ||| || ||||| |
Sbjct: 213 gaggagcaagcgggacttgcatctgctctgctgcattggaaagctggcttttgaccggaa 272
Query: 311 caaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaaca 369
||||||| | ||||| || || ||||| ||||||||||||| | ||| ||| |||||||
Sbjct: 273 caaccttattcgggttactaaaagagttctcatccatcacat-tactggatgagagaaca 331
Query: 370 gtggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcagg 429
||||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 332 gtggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgagg 391
Query: 430 gtcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcc 489
|||| | ||| |||| ||| |||| | ||||||||||| |||||| || || | |||
Sbjct: 392 ctcactggatcaaacccaaagattataatctttactcttaagaagctattttcacaatcc 451
Query: 490 tgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttgga 549
||||| ||||| ||| | ||||| | ||||| |||| ||||| ||||||| ||||
Sbjct: 452 tgccaagtaattgcacatgctgccaaagaaccaaagtacctggaaatgattgtaactgga 511
Query: 550 tggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccg 609
|| ||||||||||| ||||| || | |||||| ||||||||||||||||| ||||| ||
Sbjct: 512 tgaaacatagcaccgctagattcaccgaaaagagtctgcatccagtaactaggagttcca 571
Query: 610 taatgctgccaggagttgaagacgattgcgtctgggttccac 651
|| || ||||||||||| || || || |||||||||||||||
Sbjct: 572 tattgttgccaggagttaaatacaatggcgtctgggttccac 613
Score = 139 bits (70), Expect = 2e-030
Identities = 82/86 (95%)
Strand = Plus / Plus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcct 711
||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct: 671 ctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcct 730
Query: 712 ctacctgcatcacctctccaaacagc 737
||||||||||||| ||||||||||||
Sbjct: 731 ctacctgcatcacttctccaaacagc 756
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 79249 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 79190
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 79189 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 79130
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 79129 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 79070
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 79069 gcgtctgggttccacct 79053
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 78773 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 78714
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 78713 cctctacctgcatcacttctccaaacagc 78685
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 86602 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 86543
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 86542 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 86483
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 86482 tccatactgttgccaggagttgaagacaattgcatctgggttcca 86438
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||| | ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 110181 cacctatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 110122
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 110121 cctttaccagcatc 110108
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 79708 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 79649
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 79648 aggagcaagcgtgacttgcatctgctctgctgcattg 79612
Score = 61.9 bits (31), Expect = 5e-007
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 492 ccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatg 551
|||||| || ||||| || || |||||| | ||||||||||| | ||| || |||||||
Sbjct: 110798 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 110739
Query: 552 gaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgta 611
| || || |||||| || || |||||| || |||||||| ||||| |||||||| ||
Sbjct: 110738 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 110679
Query: 612 atgctgccaggagttgaagacgattgcgtctgggttcca 650
|| |||||||| ||||| || ||||| |||||||||||
Sbjct: 110678 ctgttgccaggaattgaatacaattgcatctgggttcca 110640
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 79454 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 79396
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 79395 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 79336
Query: 453 tat 455
|||
Sbjct: 79335 tat 79333
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 85741 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 85698
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 458736 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 458677
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 458676 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 458617
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 458616 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 458557
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 458556 gcgtctgggttccacct 458540
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 458260 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 458201
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 458200 cctctacctgcatcacttctccaaacagc 458172
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 466089 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 466030
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 466029 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 465970
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 465969 tccatactgttgccaggagttgaagacaattgcatctgggttcca 465925
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||| | ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 489668 cacctatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 489609
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 489608 cctttaccagcatc 489595
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 459195 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 459136
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 459135 aggagcaagcgtgacttgcatctgctctgctgcattg 459099
Score = 61.9 bits (31), Expect = 5e-007
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 492 ccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatg 551
|||||| || ||||| || || |||||| | ||||||||||| | ||| || |||||||
Sbjct: 490285 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 490226
Query: 552 gaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgta 611
| || || |||||| || || |||||| || |||||||| ||||| |||||||| ||
Sbjct: 490225 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 490166
Query: 612 atgctgccaggagttgaagacgattgcgtctgggttcca 650
|| |||||||| ||||| || ||||| |||||||||||
Sbjct: 490165 ctgttgccaggaattgaatacaattgcatctgggttcca 490127
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 458941 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 458883
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 458882 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 458823
Query: 453 tat 455
|||
Sbjct: 458822 tat 458820
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 465228 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 465185
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 22505 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 22564
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 22565 cctctacctgcatcacttctccaaacagc 22593
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Plus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 22029 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 22088
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 22089 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 22148
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 22149 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 22208
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 22209 gcgtctgggttccacct 22225
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Plus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 14676 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 14735
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 14736 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 14795
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 14796 tccatactgttgccaggagttgaagacaattgcatctgggttcca 14840
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 21570 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 21629
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 21630 aggagcaagcgtgacttgcatctgctctgctgcattg 21666
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 21824 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 21882
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 21883 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 21942
Query: 453 tat 455
|||
Sbjct: 21943 tat 21945
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 15537 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 15580
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 1153601 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1153542
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 1153541 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1153482
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 1153481 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1153422
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 1153421 gcgtctgggttccacct 1153405
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 1153125 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 1153066
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 1153065 cctctacctgcatcacttctccaaacagc 1153037
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 1160954 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 1160895
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 1160894 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 1160835
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 1160834 tccatactgttgccaggagttgaagacaattgcatctgggttcca 1160790
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||| | ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1185460 cacctatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1185401
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1185400 cctttaccagcatc 1185387
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1154060 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1154001
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1154000 aggagcaagcgtgacttgcatctgctctgctgcattg 1153964
Score = 61.9 bits (31), Expect = 5e-007
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 492 ccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatg 551
|||||| || ||||| || || |||||| | ||||||||||| | ||| || |||||||
Sbjct: 1186077 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1186018
Query: 552 gaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgta 611
| || || |||||| || || |||||| || |||||||| ||||| |||||||| ||
Sbjct: 1186017 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1185958
Query: 612 atgctgccaggagttgaagacgattgcgtctgggttcca 650
|| |||||||| ||||| || ||||| |||||||||||
Sbjct: 1185957 ctgttgccaggaattgaatacaattgcatctgggttcca 1185919
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 1153806 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 1153748
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1153747 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1153688
Query: 453 tat 455
|||
Sbjct: 1153687 tat 1153685
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 1160093 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 1160050
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 1455893 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1455834
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 1455833 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1455774
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 1455773 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1455714
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 1455713 gcgtctgggttccacct 1455697
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 1455417 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 1455358
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 1455357 cctctacctgcatcacttctccaaacagc 1455329
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 1463246 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 1463187
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 1463186 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 1463127
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 1463126 tccatactgttgccaggagttgaagacaattgcatctgggttcca 1463082
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||| | ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1487752 cacctatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1487693
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1487692 cctttaccagcatc 1487679
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1456352 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1456293
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1456292 aggagcaagcgtgacttgcatctgctctgctgcattg 1456256
Score = 61.9 bits (31), Expect = 5e-007
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 492 ccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatg 551
|||||| || ||||| || || |||||| | ||||||||||| | ||| || |||||||
Sbjct: 1488369 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1488310
Query: 552 gaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgta 611
| || || |||||| || || |||||| || |||||||| ||||| |||||||| ||
Sbjct: 1488309 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1488250
Query: 612 atgctgccaggagttgaagacgattgcgtctgggttcca 650
|| |||||||| ||||| || ||||| |||||||||||
Sbjct: 1488249 ctgttgccaggaattgaatacaattgcatctgggttcca 1488211
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 1456098 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 1456040
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1456039 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1455980
Query: 453 tat 455
|||
Sbjct: 1455979 tat 1455977
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 1462385 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 1462342
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 1460454 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1460395
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 1460394 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1460335
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 1460334 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1460275
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 1460274 gcgtctgggttccacct 1460258
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 1459978 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 1459919
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 1459918 cctctacctgcatcacttctccaaacagc 1459890
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 1467807 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 1467748
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 1467747 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 1467688
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 1467687 tccatactgttgccaggagttgaagacaattgcatctgggttcca 1467643
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||| | ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1491386 cacctatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1491327
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1491326 cctttaccagcatc 1491313
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1460913 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1460854
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1460853 aggagcaagcgtgacttgcatctgctctgctgcattg 1460817
Score = 61.9 bits (31), Expect = 5e-007
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 492 ccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatg 551
|||||| || ||||| || || |||||| | ||||||||||| | ||| || |||||||
Sbjct: 1492003 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1491944
Query: 552 gaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgta 611
| || || |||||| || || |||||| || |||||||| ||||| |||||||| ||
Sbjct: 1491943 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1491884
Query: 612 atgctgccaggagttgaagacgattgcgtctgggttcca 650
|| |||||||| ||||| || ||||| |||||||||||
Sbjct: 1491883 ctgttgccaggaattgaatacaattgcatctgggttcca 1491845
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 1460659 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 1460601
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1460600 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1460541
Query: 453 tat 455
|||
Sbjct: 1460540 tat 1460538
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 1466946 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 1466903
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 145 bits (73), Expect = 4e-032
Identities = 166/197 (84%)
Strand = Plus / Minus
Query: 457 acctttactcttaggaagctgttctcggagtcctgccaggtaatcgcagacgctgcaagt 516
||||||||||||| |||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 1458175 acctttactcttaagaagctattttcagaatcctgccaagtaattgcagatgctgccaga 1458116
Query: 517 gaacctgagtagctggagctgattgtcgttggatggaacatagcaccactagactcgcgg 576
||||| ||||||||||| ||||||| |||||| ||||||||||| ||||| || | |
Sbjct: 1458115 gaaccagagtagctggaagtgattgtaactggatgaaacatagcaccgctagattcaccg 1458056
Query: 577 aaaagcgtctgcatccagtaactgggagtgccgtaatgctgccaggagttgaagacgatt 636
||||| ||||||||||||||||| ||||| || || || ||||||||||| || || ||
Sbjct: 1458055 aaaagagtctgcatccagtaactaggagttccatattgttgccaggagttaaatacaatg 1457996
Query: 637 gcgtctgggttccacct 653
|||||||||||||||||
Sbjct: 1457995 gcgtctgggttccacct 1457979
Score = 145 bits (73), Expect = 4e-032
Identities = 85/89 (95%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 1457699 cacctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactt 1457640
Query: 709 cctctacctgcatcacctctccaaacagc 737
|||||||||||||||| ||||||||||||
Sbjct: 1457639 cctctacctgcatcacttctccaaacagc 1457611
Score = 81.8 bits (41), Expect = 5e-013
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 486 gtcctgccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgt 545
|||||||||||| || ||||| ||||| ||| || | |||||||||||||||| ||
Sbjct: 1465528 gtcctgccaggtgattgcagatgctgccagtaaatcaaagtagctggagctgatagtgac 1465469
Query: 546 tggatggaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagt 605
|||||| | || || |||||| || || |||||| || |||||||| ||||| |||||
Sbjct: 1465468 tggatgaatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagt 1465409
Query: 606 gccgtaatgctgccaggagttgaagacgattgcgtctgggttcca 650
|| || || ||||||||||||||||| ||||| |||||||||||
Sbjct: 1465408 tccatactgttgccaggagttgaagacaattgcatctgggttcca 1465364
Score = 67.9 bits (34), Expect = 7e-009
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
|||||||| ||||| | ||||||||||||||||| || |||| |||||||||||| |||
Sbjct: 1489107 cacctatttttctctaacccagtaaggaaagcagcctcagccagtgaagcaagaaggctt 1489048
Query: 709 cctctacctgcatc 722
||| |||| |||||
Sbjct: 1489047 cctttaccagcatc 1489034
Score = 65.9 bits (33), Expect = 3e-008
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 1458634 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 1458575
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattg 288
|||||| |||||||| |||||||||||||| ||||||
Sbjct: 1458574 aggagcaagcgtgacttgcatctgctctgctgcattg 1458538
Score = 61.9 bits (31), Expect = 5e-007
Identities = 127/159 (79%)
Strand = Plus / Minus
Query: 492 ccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggatg 551
|||||| || ||||| || || |||||| | ||||||||||| | ||| || |||||||
Sbjct: 1489724 ccaggtgattgcagatgcagccagtgaatcggagtagctggaaccgatcgtaattggatg 1489665
Query: 552 gaacatagcaccactagactcgcggaaaagcgtctgcatccagtaactgggagtgccgta 611
| || || |||||| || || |||||| || |||||||| ||||| |||||||| ||
Sbjct: 1489664 aatcacagaaccacttgattcacggaaatatgtttgcatccaataactaggagtgccata 1489605
Query: 612 atgctgccaggagttgaagacgattgcgtctgggttcca 650
|| |||||||| ||||| || ||||| |||||||||||
Sbjct: 1489604 ctgttgccaggaattgaatacaattgcatctgggttcca 1489566
Score = 61.9 bits (31), Expect = 5e-007
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Minus
Query: 334 gagttttcatccatcacatctgctg-atgtgagaacagtggcggttgatcccagagcgtt 392
||||| ||||||||||||| | ||| |||||||||||||||| ||||||||||| || ||
Sbjct: 1458380 gagttctcatccatcacat-tactggatgtgagaacagtggcagttgatcccagtgcatt 1458322
Query: 393 gatactggcctggagcccacttgtggagattgtcagggtcacagcatctgacccgaagtt 452
| || |||||| |||||| ||| ||||| || ||| |||| | ||| ||||| |||||
Sbjct: 1458321 aacacgggcctgaagcccagttgcagagatcgtgaggctcactggatcagacccaaagtt 1458262
Query: 453 tat 455
|||
Sbjct: 1458261 tat 1458259
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 667 ccagtaaggaaagcagcttctgccaatgaagcaagaagacttcc 710
||||| |||||||||||||||||||| || ||||| || |||||
Sbjct: 1464667 ccagtgaggaaagcagcttctgccaacgatgcaaggaggcttcc 1464624
>gb|CB671150.1|CB671150 OSJNEe04J07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04J07 3', mRNA sequence
Length = 779
Score = 143 bits (72), Expect = 2e-031
Identities = 284/352 (80%), Gaps = 2/352 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 414 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 473
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 474 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 533
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| |||||| |||||
Sbjct: 534 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgaaaacag 592
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 593 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 652
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 653 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 712
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgt 542
|||| ||||| ||||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 713 gccaagtaattgcagatgctgccagagaaccagagtagctggaagtgattgt 764
>gb|CV732956.1|CV732956 FLO--07-K16.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-K16,
mRNA sequence
Length = 496
Score = 131 bits (66), Expect = 6e-028
Identities = 260/322 (80%), Gaps = 2/322 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || || || |||||||| || || || |||||||| ||| ||| ||| |
Sbjct: 173 tcacatctctgccacgagtttggactgggcaagcgcaagatcgaatgaggagaaagagtg 232
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 233 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 292
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgctg-atgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | ||| ||||||||||||
Sbjct: 293 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgagaacag 351
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| ||||| || |||
Sbjct: 352 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcagagatcgtgaggc 411
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| ||||| |||||||| | ||||||||||| |||||| || || || ||||
Sbjct: 412 tcactggatcagacccaaagtttataatctttactcttaagaagctattttcagaatcct 471
Query: 491 gccaggtaatcgcagacgctgc 512
|||| ||||| ||||| |||||
Sbjct: 472 gccaagtaattgcagatgctgc 493
>gb|CV732955.1|CV732955 FLO--07-K16.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-K16,
mRNA sequence
Length = 152
Score = 125 bits (63), Expect = 4e-026
Identities = 75/79 (94%)
Strand = Plus / Minus
Query: 659 tctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagacttcctctacctg 718
|||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||
Sbjct: 152 tctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagacttcctctacctg 93
Query: 719 catcacctctccaaacagc 737
|||||| ||||||||||||
Sbjct: 92 catcacttctccaaacagc 74
>gb|CF323512.1|CF323512 HDN--04-A19.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-A19, mRNA sequence
Length = 498
Score = 121 bits (61), Expect = 6e-025
Identities = 82/88 (93%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 652 ctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt--c 709
||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| |
Sbjct: 413 ctattcttctccagtccagtaaggaaagctgcctctgccaatgaagcaagtagactttcc 354
Query: 710 ctctacctgcatcacctctccaaacagc 737
||||||||||||||| ||||||||||||
Sbjct: 353 ctctacctgcatcacttctccaaacagc 326
>gb|CB664092.1|CB664092 OSJNEd09J24.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09J24 5', mRNA sequence
Length = 774
Score = 107 bits (54), Expect = 8e-021
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 673 aggaaagcagcttctgccaatgaagcaagaagacttcctctacctgcatcacctctccaa 732
||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 774 aggaaagcagcttctgccaatgaagcaagtagacttcctctacntgcatcacttctccaa 715
Query: 733 acagc 737
|||||
Sbjct: 714 acagc 710
>gb|CB669692.1|CB669692 OSJNEe02F24.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02F24 3', mRNA sequence
Length = 699
Score = 99.6 bits (50), Expect = 2e-018
Identities = 316/402 (78%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 192 tcacatctccgctacaagcttggactgagccagggcgagatcgaacgagctgaaggagcg 251
||||||||| || ||||| |||||||| || || || | |||||| ||| || ||| |
Sbjct: 299 tcacatctctgccacaagtttggactgggcaagcgcaaaatcgaatgaggaaaaagagtg 358
Query: 252 aggagccagcgtgacctgcatctgctctgcagcattgctcagatcgctctttaccggcac 311
|||||| |||||||| |||||||||||||| |||||| || | ||| || || || ||
Sbjct: 359 aggagcaagcgtgacttgcatctgctctgctgcattggaaagctggcttttgacaggaac 418
Query: 312 aaccttggttgggttgctgaaggagttttcatccatcacatctgct-gatgtgagaacag 370
|||||| | ||||| || || ||||| ||||||||||||| | || ||||||| |||||
Sbjct: 419 aaccttattcgggttactaaaagagttctcatccatcacat-tactggatgtgaaaacag 477
Query: 371 tggcggttgatcccagagcgttgatactggcctggagcccacttgtggagattgtcaggg 430
|||| ||||||||||| || || | || |||||| |||||| ||| | || || |||
Sbjct: 478 tggcagttgatcccagtgcattaacacgggcctgaagcccagttgcaaaaatcgtgaggc 537
Query: 431 tcacagcatctgacccgaagtttatgacctttactcttaggaagctgttctcggagtcct 490
|||| | ||| |||| |||||||| | ||||||||||| ||||| || || | ||||
Sbjct: 538 tcactggatcaaacccaaagtttataatctttactcttaaaaagctattttcaaaatcct 597
Query: 491 gccaggtaatcgcagacgctgcaagtgaacctgagtagctggagctgattgtcgttggat 550
|||| ||||| ||||| ||||| | |||| |||||||||| ||||||| |||||
Sbjct: 598 gccaagtaattgcagatgctgccaaaaaaccaaagtagctggaagtgattgtaactggat 657
Query: 551 ggaacatagcaccactagactcgcggaaaagcgtctgcatcc 592
| ||||||||||| ||||| || | |||||| ||||||||||
Sbjct: 658 gaaacatagcaccgctagattcaccgaaaagagtctgcatcc 699
>gb|AQ050970.2|AQ050970 nbxb0004dD06r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0004H12r, DNA sequence
Length = 847
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||| ||
Sbjct: 272 cacctattcttctccagtccagtgaggaaagcagcctcagccagtgaggcaagaagagtt 213
Query: 709 cctctacct 717
|||||||||
Sbjct: 212 cctctacct 204
>gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009093, whole
genome shotgun sequence
Length = 33275
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||| ||
Sbjct: 9196 cacctattcttctccagtccagtgaggaaagcagcctcagccagtgaggcaagaagagtt 9255
Query: 709 cctctacct 717
|||||||||
Sbjct: 9256 cctctacct 9264
Score = 71.9 bits (36), Expect = 5e-010
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 530 tggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagcgtctgca 589
||||| |||||||| |||||| | || ||||||||| || |||||||||| |||||||
Sbjct: 8777 tggagttgattgtcactggatgcagcacagcaccactcgattcgcggaaaattgtctgca 8836
Query: 590 tccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtctgggttcc 649
|||||||||| ||| | || || || | ||| ||||||||||||| || |||||||||
Sbjct: 8837 tccagtaactaggacttccatactgtttccatgagttgaagacgacagcagctgggttcc 8896
Query: 650 acct 653
||||
Sbjct: 8897 acct 8900
>ref|NT_079855.2| Oryza sativa (japonica cultivar-group)
Length = 2354488
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 649 cacctattcttctccagtccagtaaggaaagcagcttctgccaatgaagcaagaagactt 708
||||||||||||||||||||||| ||||||||||| || |||| ||| ||||||||| ||
Sbjct: 2228884 cacctattcttctccagtccagtgaggaaagcagcctcagccagtgaggcaagaagagtt 2228943
Query: 709 cctctacct 717
|||||||||
Sbjct: 2228944 cctctacct 2228952
Score = 71.9 bits (36), Expect = 5e-010
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 530 tggagctgattgtcgttggatggaacatagcaccactagactcgcggaaaagcgtctgca 589
||||| |||||||| |||||| | || ||||||||| || |||||||||| |||||||
Sbjct: 2228465 tggagttgattgtcactggatgcagcacagcaccactcgattcgcggaaaattgtctgca 2228524
Query: 590 tccagtaactgggagtgccgtaatgctgccaggagttgaagacgattgcgtctgggttcc 649
|||||||||| ||| | || || || | ||| ||||||||||||| || |||||||||
Sbjct: 2228525 tccagtaactaggacttccatactgtttccatgagttgaagacgacagcagctgggttcc 2228584
Query: 650 acct 653
||||
Sbjct: 2228585 acct 2228588
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 806,507
Number of Sequences: 438736
Number of extensions: 806507
Number of successful extensions: 4113
Number of sequences better than 0.5: 82
Number of HSP's better than 0.5 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3682
Number of HSP's gapped (non-prelim): 343
length of query: 739
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 718
effective length of database: 2,791,206,460
effective search space: 2004086238280
effective search space used: 2004086238280
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)