BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2922138.2.1
(1095 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA... 418 e-114
dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA... 410 e-112
dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA... 410 e-112
gb|CB681766.1|CB681766 OSJNEf08G19.f OSJNEf Oryza sativa (j... 343 1e-091
gb|CF333182.1|CF333182 JMT--01-P16.g1 AtJMT-overexpressing ... 335 3e-089
gb|CF315422.1|CF315422 HD--04-F10.g1 OsHDAC1-overexpressing... 331 5e-088
gb|CF293339.1|CF293339 30DGS--02-H22.b1 Rice leaf plasmid c... 307 7e-081
gb|CB681767.1|CB681767 OSJNEf08G19.r OSJNEf Oryza sativa (j... 305 3e-080
gb|AU101758.1|AU101758 AU101758 Rice green shoot Oryza sati... 242 3e-061
gb|CV725520.1|CV725520 14Salt--02-K10.b1 Salt treated rice ... 234 8e-059
gb|CF327829.1|CF327829 NACL--02-H14.g1 Rice callus plasmid ... 212 3e-052
gb|D47553.1|D47553 RICS13124A Rice green shoot Oryza sativa... 200 1e-048
gb|C25904.1|C25904 C25904 Rice callus cDNA Oryza sativa (ja... 192 3e-046
dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA... 174 7e-041
gb|D39465.1|D39465 RICS0811A Rice shoot Oryza sativa (japon... 139 4e-030
gb|CV725521.1|CV725521 14Salt--02-K10.g1 Salt treated rice ... 121 8e-025
gb|AC132492.3| Oryza sativa (japonica cultivar-group) chrom... 119 3e-024
gb|AACV01012112.1| Oryza sativa (japonica cultivar-group) c... 119 3e-024
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 119 3e-024
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 119 3e-024
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 119 3e-024
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 119 3e-024
gb|CV723245.1|CV723245 root--02-P10.g1 Rice root lambda pha... 109 3e-021
gb|AU166756.1|AU166756 AU166756 Rice callus (2001) Oryza sa... 100 3e-018
gb|D47744.1|D47744 RICS13413A Rice green shoot Oryza sativa... 92 8e-016
gb|AACV01012111.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) c... 82 7e-013
gb|AU166755.1|AU166755 AU166755 Rice callus (2001) Oryza sa... 80 3e-012
gb|CL522875.1|CL522875 SAN1G04 Flanking Sequence Tag of Ory... 60 3e-006
gb|AU070505.1|AU070505 AU070505 Rice shoot Oryza sativa (ja... 44 0.16
dbj|AK059753.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
>dbj|AK060876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A04, full
insert sequence
Length = 1014
Score = 418 bits (211), Expect = e-114
Identities = 592/719 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 33 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 92
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 93 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 152
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 153 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 212
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 213 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 272
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 273 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 332
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 333 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 392
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagct 551
| |||| |||| ||| |||||||||||||||||||| || || ||||| | ||||||
Sbjct: 393 agtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagct 452
Query: 552 catgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaa 611
||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 453 catgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaa 512
Query: 612 gaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggag 671
|||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 513 gaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaa 572
Query: 672 ctaatcaagcagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaag 731
| | ||||||||||||||||| ||||||| || |||||| |||||||||| ||||||
Sbjct: 573 gtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaag 632
Query: 732 atcttccctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgcc 791
||||||||||| || | |||||||||| ||||||||||| | || || ||||||||
Sbjct: 633 atcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgct 692
Query: 792 gtgaagagtgctgaggaagcctttgcggacatgctcgactggttcaacaagaatctgaa 850
|| ||||| || ||||||||| | ||||||||| | |||||||| || ||||| |||||
Sbjct: 693 gtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 751
>dbj|AK073623.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048N15, full
insert sequence
Length = 1127
Score = 410 bits (207), Expect = e-112
Identities = 591/719 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 217 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 276
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 277 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 336
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 337 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 396
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 397 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 456
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 457 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 516
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 517 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 576
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagct 551
| |||| |||| ||| |||||||||||||||||||| || || ||||| | ||||||
Sbjct: 577 agtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagct 636
Query: 552 catgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaa 611
||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 637 catgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaa 696
Query: 612 gaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggag 671
|||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 697 gaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaa 756
Query: 672 ctaatcaagcagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaag 731
| ||||||||||||||||| ||||||| || |||||| |||||||||| ||||||
Sbjct: 757 gtggagaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaag 816
Query: 732 atcttccctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgcc 791
||||||||||| || | |||||||||| ||||||||||| | || || ||||||||
Sbjct: 817 atcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgct 876
Query: 792 gtgaagagtgctgaggaagcctttgcggacatgctcgactggttcaacaagaatctgaa 850
|| ||||| || ||||||||| | ||||||||| | |||||||| || ||||| |||||
Sbjct: 877 gtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 935
>dbj|AK101551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048O15, full
insert sequence
Length = 1127
Score = 410 bits (207), Expect = e-112
Identities = 591/719 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 217 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 276
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 277 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 336
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 337 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 396
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 397 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 456
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 457 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 516
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 517 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 576
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagct 551
| |||| |||| ||| |||||||||||||||||||| || || ||||| | ||||||
Sbjct: 577 agtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagct 636
Query: 552 catgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaa 611
||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 637 catgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaa 696
Query: 612 gaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggag 671
|||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 697 gaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaa 756
Query: 672 ctaatcaagcagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaag 731
| ||||||||||||||||| ||||||| || |||||| |||||||||| ||||||
Sbjct: 757 gtggagaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaag 816
Query: 732 atcttccctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgcc 791
||||||||||| || | |||||||||| ||||||||||| | || || ||||||||
Sbjct: 817 atcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgct 876
Query: 792 gtgaagagtgctgaggaagcctttgcggacatgctcgactggttcaacaagaatctgaa 850
|| ||||| || ||||||||| | ||||||||| | |||||||| || ||||| |||||
Sbjct: 877 gtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 935
>gb|CB681766.1|CB681766 OSJNEf08G19.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08G19 5', mRNA sequence
Length = 832
Score = 343 bits (173), Expect = 1e-091
Identities = 497/605 (82%)
Strand = Plus / Plus
Query: 246 tccaaggccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgagg 305
||||||||||||||||||||| | |||| |||||||| || |||||||||| |||||
Sbjct: 7 tccaaggccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgagg 66
Query: 306 aacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcat 365
|| ||||||||||||||||| ||||| || |||||||||||||| ||||||||||| |||
Sbjct: 67 aagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacat 126
Query: 366 ggggatccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacat 425
|||||||||| | |||||| | | |||||| || |||| |||||||||| ||||
Sbjct: 127 ggggatcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacat 186
Query: 426 actccggaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaaggga 485
||||| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||
Sbjct: 187 ggcccggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaagga 246
Query: 486 gtgtctgctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggca 545
|||||| | |||| |||| ||| |||||||||||||||||||| || || ||||| |
Sbjct: 247 gtgtctagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtg 306
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 307 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 366
Query: 606 atcaaagaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtcccca 665
|| ||||||||||| ||| ||||| |||| || |||||||| ||||| |||||||||
Sbjct: 367 atgaaagaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtcccca 426
Query: 666 ccggagctaatcaagcagttcgagcaggtcctttctttgaactcaggggttggccacttc 725
|| || | | ||||||||||||||||| ||||||| || |||||| ||||||||||
Sbjct: 427 ccagaagtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggccacttt 486
Query: 726 gtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgca 785
||||||||||||||||| || | |||||||||| ||||||||||| | || || |||
Sbjct: 487 gtcaagatcttccctggggttgaacatggatggactgtgagatacaagaatgatgatgca 546
Query: 786 gctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggttcaacaagaat 845
||||| || ||||| || ||||||||| | ||||||||| | |||||||| || |||||
Sbjct: 547 gctgctgtcaagagcgccgaggaagccctggcggacatgattgactggtttaataagaac 606
Query: 846 ctgaa 850
|||||
Sbjct: 607 ctgaa 611
>gb|CF333182.1|CF333182 JMT--01-P16.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--01-P16, mRNA sequence
Length = 597
Score = 335 bits (169), Expect = 3e-089
Identities = 469/569 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 29 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 88
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 89 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 148
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 149 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 208
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 209 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 268
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 269 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 328
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 329 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 388
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagct 551
| |||| |||| ||| |||||||||||||||||||| || || ||||| | ||||||
Sbjct: 389 agtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagct 448
Query: 552 catgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaa 611
||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 449 catgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaa 508
Query: 612 gaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggag 671
|||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 509 gaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaa 568
Query: 672 ctaatcaagcagttcgagcaggtcctttc 700
| | ||||||||||||||||| |||||
Sbjct: 569 gtggtgaagcagttcgagcaggttctttc 597
>gb|CF315422.1|CF315422 HD--04-F10.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-F10, mRNA sequence
Length = 607
Score = 331 bits (167), Expect = 5e-088
Identities = 470/571 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 34 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 93
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 94 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 153
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 154 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 213
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 214 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 273
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 274 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 333
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 334 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 393
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagct 551
| |||| |||| ||| |||||||||||||||||||| | || ||||| | ||||||
Sbjct: 394 agtattggggctgtaggttattgctggggtgcaaaggtggcggtagagttagtgaaagct 453
Query: 552 catgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaa 611
||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 454 catgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaa 513
Query: 612 gaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggag 671
|||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 514 gaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaa 573
Query: 672 ctaatcaagcagttcgagcaggtcctttctt 702
| | ||||||||||||||||| |||||||
Sbjct: 574 gtggtgaagcagttcgagcaggttctttctt 604
>gb|CF293339.1|CF293339 30DGS--02-H22.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--02-H22, mRNA sequence
Length = 524
Score = 307 bits (155), Expect = 7e-081
Identities = 412/498 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 25 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 84
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 85 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 144
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 145 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 204
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 205 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 264
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 265 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 324
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 325 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 384
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagct 551
| |||| |||| ||| |||||||||||||||||||| || || ||||| ||||||
Sbjct: 385 agtattggggctgtaggttattgctggggtgcaaaggtggtggtagagttantgaaagct 444
Query: 552 catgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaa 611
||||||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 445 catgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaa 504
Query: 612 gaggtcaagtgcgcaatt 629
|||||||| ||| |||||
Sbjct: 505 gaggtcaaatgcccaatt 522
>gb|CB681767.1|CB681767 OSJNEf08G19.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08G19 3', mRNA sequence
Length = 831
Score = 305 bits (154), Expect = 3e-080
Identities = 451/550 (82%)
Strand = Plus / Minus
Query: 301 tgaggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttct 360
||||||| ||||||||||||||||| ||||| || |||||||||||||| ||||||||||
Sbjct: 830 tgaggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttct 771
Query: 361 ttcatggggatccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagt 420
| ||||||||||||| | |||||| | | |||||| || |||| ||||||||||
Sbjct: 770 tacatggggatcctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaag 711
Query: 421 cacatactccggaaaaagggtttgaagagacaaaacaagttattggggctctaaaggaga 480
|||| ||||| |||| ||||||||| | |||| | |||||| ||||| |||||||
Sbjct: 710 aacatggcccggacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggaga 651
Query: 481 agggagtgtctgctgttggagctgcagggtattgctggggtgcaaaggttgttgtggagt 540
| ||||||||| | |||| |||| ||| |||||||||||||||||||| || || ||||
Sbjct: 650 aaggagtgtctagtattggggctgtaggttattgctggggtgcaaaggtggtggtagagt 591
Query: 541 tggcaaaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttg 600
| | ||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||
Sbjct: 590 tagtgaaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttg 531
Query: 601 acgatatcaaagaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgt 660
| ||||| ||||||||||| ||| ||||| |||| || |||||||| ||||| ||||
Sbjct: 530 atgatatgaaagaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgt 471
Query: 661 ccccaccggagctaatcaagcagttcgagcaggtcctttctttgaactcaggggttggcc 720
||||||| || | | ||||||||||||||||| ||||||| || |||||| ||||||
Sbjct: 470 ccccaccagaagtggtgaagcagttcgagcaggttctttcttcaaagtcagggattggcc 411
Query: 721 acttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgacg 780
|||| ||||||||||||||||| || | |||||||||| ||||||||||| | || |
Sbjct: 410 actttgtcaagatcttccctggggttgaacatggatggactgtgagatacaagaatgatg 351
Query: 781 acgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggttcaaca 840
| |||||||| || ||||| || ||||||||| | ||||||||| | |||||||| || |
Sbjct: 350 atgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggtttaata 291
Query: 841 agaatctgaa 850
|||| |||||
Sbjct: 290 agaacctgaa 281
>gb|AU101758.1|AU101758 AU101758 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13124, mRNA sequence
Length = 710
Score = 242 bits (122), Expect = 3e-061
Identities = 338/410 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 75 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 134
Query: 501 gctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagctcatgagatc 560
|||| ||| |||||||||||||||||||| || || ||||| | |||||||||||||||
Sbjct: 135 gctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagctcatgagatc 194
Query: 561 caggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaagaggtcaag 620
|||||||||||| ||| ||||| |||||||| || ||||| ||||| |||||||||||
Sbjct: 195 caggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaagaggtcaaa 254
Query: 621 tgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggagctaatcaag 680
||| ||||| |||| || |||||||| ||||| ||||||||||| || | | |||
Sbjct: 255 tgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaagtggtgaag 314
Query: 681 cagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaagatcttccct 740
|||||||||||||| ||||||| || |||||| |||||||||| |||||||||||||||
Sbjct: 315 cagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaagatcttccct 374
Query: 741 ggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgccgtgaagagt 800
|| || | |||||||||| ||||||||||| | || || |||||||| || |||||
Sbjct: 375 ggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgctgtcaagagc 434
Query: 801 gctgaggaagcctttgcggacatgctcgactggttcaacaagaatctgaa 850
|| ||||||||| | ||||||||| | |||||||| || ||||| |||||
Sbjct: 435 gccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 484
>gb|CV725520.1|CV725520 14Salt--02-K10.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-K10, mRNA sequence
Length = 478
Score = 234 bits (118), Expect = 8e-059
Identities = 328/398 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 65 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 124
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 125 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 184
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| ||
Sbjct: 185 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaaggta 244
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 245 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 304
Query: 372 ccttatgcacctgagaatgttgagaagccctttcctgtgtggataaagtcacatactccg 431
|||| | |||||| | | |||||| || |||| |||||||||| |||| |||
Sbjct: 305 cctttagtacctgaaagtactgagaaaccgtttcaaatgtggataaaagaacatggcccg 364
Query: 432 gaaaaagggtttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtct 491
|| |||| ||||||||| | |||| | |||||| ||||| |||||||| |||||||||
Sbjct: 365 gacaaagcatttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtct 424
Query: 492 gctgttggagctgcagggtattgctggggtgcaaaggt 529
| |||| |||| ||| ||||||||||||||||||||
Sbjct: 425 agtattggggctgtaggttattgctggggtgcaaaggt 462
>gb|CF327829.1|CF327829 NACL--02-H14.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--02-H14, mRNA sequence
Length = 586
Score = 212 bits (107), Expect = 3e-052
Identities = 293/355 (82%)
Strand = Plus / Minus
Query: 496 ttggagctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagctcatg 555
|||| |||| ||| |||||||||||||||||||| || || ||||| | ||||||||||
Sbjct: 582 ttggggctgtaggttattgctggggtgcaaaggtggtggtagagttagtgaaagctcatg 523
Query: 556 agatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaagagg 615
||||||||||||||||| ||| ||||| |||||||| || ||||| ||||| |||||||
Sbjct: 522 agatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgatatgaaagagg 463
Query: 616 tcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggagctaa 675
|||| ||| ||||| |||| || |||||||| ||||| ||||||||||| || |
Sbjct: 462 tcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccagaagtgg 403
Query: 676 tcaagcagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaagatct 735
| ||||||||||||||||| ||||||| || |||||| |||||||||| ||||||||||
Sbjct: 402 tgaagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaagatct 343
Query: 736 tccctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgccgtga 795
||||||| || | | |||||||| ||||||||||| | || || |||||||| || |
Sbjct: 342 tccctggggttgaacgtggatggactgtgagatacaagaatgatgatgcagctgctgtca 283
Query: 796 agagtgctgaggaagcctttgcggacatgctcgactggttcaacaagaatctgaa 850
|||| || ||||||||| | ||||||||| | |||||||| || ||||| |||||
Sbjct: 282 agagcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 228
>gb|D47553.1|D47553 RICS13124A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 457
Score = 200 bits (101), Expect = 1e-048
Identities = 181/208 (87%)
Strand = Plus / Plus
Query: 168 ctgaacccggcctgcgggaagggcaaggtcgtcgacagcttcggcgggctcaaggcctac 227
|||||||||||| ||||| |||| ||||| || || |||||||||||| ||||||| |||
Sbjct: 33 ctgaacccggccggcggggaggggaaggtggtggagagcttcggcgggatcaaggcgtac 92
Query: 228 gtcgccggccccgaggactccaaggccgccgtcgtcctcgttgccgacgtcttcggattc 287
|||| |||| ||| ||| ||||||||||||||||||||| | |||| |||||||| ||
Sbjct: 93 gtcgncggcgccgcggagtccaaggccgccgtcgtcctcatctccgatgtcttcgggttt 152
Query: 288 gaagcgccgattatgaggaacatagccgacaaagttgcttcgtcagggtactttgttgtg 347
|||||||||| ||||||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct: 153 gaagcgccgaacctgaggaagatagccgacaaagttgcctcgtctggatactttgttgtg 212
Query: 348 gtaccagatttctttcatggggatcctt 375
|| ||||||||||| |||||||||||||
Sbjct: 213 gtgccagatttcttacatggggatcctt 240
>gb|C25904.1|C25904 C25904 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C11060_1A, mRNA sequence
Length = 458
Score = 192 bits (97), Expect = 3e-046
Identities = 208/244 (85%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 26 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 85
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||| | ||||||| |||||||| ||| ||| ||| ||||||
Sbjct: 86 aaggtggtggagagcttcggcgngatcaaggcgtacgtcgc-ggcgccgcggagtccaag 144
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 145 gccgccgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 204
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatggggat 371
|||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 205 gccgacaaagttgcctcgtctggatactttgttgtggtgccagatttcttacatggggat 264
Query: 372 cctt 375
||||
Sbjct: 265 cctt 268
>dbj|AK101507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044O16, full
insert sequence
Length = 1039
Score = 174 bits (88), Expect = 7e-041
Identities = 301/372 (80%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| |||||| |||||||| ||||||||||||||||||| ||| | ||
Sbjct: 353 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatcggg 412
Query: 501 gctgcagggtattgctggggtgcaaaggttgttgtggagttggcaaaagctcatgagatc 560
|||||||| ||||| |||||||||||||| || |||||||| | |||| ||||| |||
Sbjct: 413 gctgcaggttattgttggggtgcaaaggtagtggtggagttaggcaaagtccatgaaatc 472
Query: 561 caggctgctgtgctgttgcacccttcttttgttaccgttgacgatatcaaagaggtcaag 620
||||||||||| || | ||||||||||| || | || || || |||||||| |||||
Sbjct: 473 caggctgctgtattgctacacccttctttacttgctgtcgatgacatcaaagaagtcaaa 532
Query: 621 tgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggagctaatcaag 680
||| |||||||||| || || ||||| |||||||| | ||| ||||| ||||| | |||
Sbjct: 533 tgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctgttaaag 592
Query: 681 cagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaagatcttccct 740
||||| |||||| |||||||| ||| | | | ||| |||||||||||||| |||||
Sbjct: 593 cagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagattttcccc 652
Query: 741 ggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgccgtgaagagt 800
|| || | |||||||||| ||||||||||| ||||| || ||||||||||| |||||
Sbjct: 653 ggcgtagagcatggatgggctgtgagatacaatcacgatgatgcagctgccgtcaagagc 712
Query: 801 gctgaggaagcc 812
||||||||||||
Sbjct: 713 gctgaggaagcc 724
Score = 109 bits (55), Expect = 3e-021
Identities = 193/239 (80%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 47 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 106
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 107 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 166
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||||| ||| || || ||||| || | ||||||| |||
Sbjct: 167 gccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgaggaagata 226
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatgggga 370
|| ||||| ||||||| || || ||||| |||||||| ||||||||| ||||||||||
Sbjct: 227 gcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcatgggga 285
>gb|D39465.1|D39465 RICS0811A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 247
Score = 139 bits (70), Expect = 4e-030
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 58 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 117
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 118 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 177
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
|||| |||||||||| | |||| |||||||| || |||||||||| ||||||| |||
Sbjct: 178 gccgncgtcgtcctcatctccgatgtcttcgggtttgaagcgccgaacctgaggaagata 237
Query: 312 gccgacaaa 320
|||||||||
Sbjct: 238 gccgacaaa 246
>gb|CV725521.1|CV725521 14Salt--02-K10.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-K10, mRNA sequence
Length = 389
Score = 121 bits (61), Expect = 8e-025
Identities = 145/173 (83%)
Strand = Plus / Minus
Query: 678 aagcagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaagatcttc 737
||||||||||||||||| ||||||| || |||||| |||||||||| ||||||||||||
Sbjct: 382 aagcagttcgagcaggttctttcttcaaagtcagggattggccactttgtcaagatcttc 323
Query: 738 cctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgccgtgaag 797
||||| || | |||||||||| ||||||||||| | || || |||||||| || |||
Sbjct: 322 cctggggttgaacatggatggactgtgagatacaagaatgatgatgcagctgctgtcaag 263
Query: 798 agtgctgaggaagcctttgcggacatgctcgactggttcaacaagaatctgaa 850
|| || ||||||||| | ||||||||| | |||||||| || ||||| |||||
Sbjct: 262 agcgccgaggaagccctggcggacatgattgactggtttaataagaacctgaa 210
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
complete sequence
Length = 146303
Score = 119 bits (60), Expect = 3e-024
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 69628 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 69687
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 69688 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 69747
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcgg 283
||||||||||||||| | |||| ||||||||
Sbjct: 69748 gccgccgtcgtcctcatctccgatgtcttcgg 69779
Score = 97.6 bits (49), Expect = 1e-017
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 303 aggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttcttt 362
||||| ||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 70861 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 70920
Query: 363 catggggatcctt 375
|||||||||||||
Sbjct: 70921 catggggatcctt 70933
Score = 87.7 bits (44), Expect = 1e-014
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||||||||| ||||||||||||||||| || | |||||||||| |||||||||||
Sbjct: 73021 ttggccactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaaga 73080
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| || || |||||||| || ||||| || ||||||||| | ||||||||| | |||||||
Sbjct: 73081 atgatgatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggt 73140
Query: 835 tcaacaagaatctgaa 850
| || ||||| |||||
Sbjct: 73141 ttaataagaacctgaa 73156
Score = 83.8 bits (42), Expect = 2e-013
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | ||||||||||| ||| ||||||||
Sbjct: 66488 ttggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaagg 66547
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| ||||| || ||||| || ||||| || ||||||||| | || |||||| |||||||||
Sbjct: 66548 atgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactggt 66607
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 66608 ttaataagaa 66617
Score = 81.8 bits (41), Expect = 7e-013
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 720 cacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgac 779
|||||||||||||| ||||| || || | |||||||||| ||||||||||| |||||
Sbjct: 82657 cacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaatcacgat 82716
Query: 780 gacgcagctgccgtgaagagtgctgaggaagcc 812
|| ||||||||||| ||||| ||||||||||||
Sbjct: 82717 gatgcagctgccgtcaagagcgctgaggaagcc 82749
Score = 77.8 bits (39), Expect = 1e-011
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 75436 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 75495
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 75496 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 75555
Query: 252 gccgccgtcgtcctc 266
|||||||||||||||
Sbjct: 75556 gccgccgtcgtcctc 75570
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 72106 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 72165
Query: 606 atcaaag 612
|| ||||
Sbjct: 72166 atgaaag 72172
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggag 486
||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 77242 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggag 77287
Score = 52.0 bits (26), Expect = 7e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 71898 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 71957
Query: 501 gctgcagggtattgctggggtg 522
|||| ||| |||||||||||||
Sbjct: 71958 gctgtaggttattgctggggtg 71979
Score = 50.1 bits (25), Expect = 0.003
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 611 agaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccgga 670
||||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 72267 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 72326
Query: 671 gctaatcaagcagttcgagcaggtcctttctttgaactcaggggt 715
| | ||||||||||||||||| ||||||| || ||||||||
Sbjct: 72327 agtggtgaagcagttcgagcaggttctttcttcaaagtcaggggt 72371
>gb|AACV01012112.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012112, whole
genome shotgun sequence
Length = 11769
Score = 119 bits (60), Expect = 3e-024
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 1942 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 2001
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 2002 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 2061
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcgg 283
||||||||||||||| | |||| ||||||||
Sbjct: 2062 gccgccgtcgtcctcatctccgatgtcttcgg 2093
Score = 97.6 bits (49), Expect = 1e-017
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 303 aggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttcttt 362
||||| ||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 3175 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 3234
Query: 363 catggggatcctt 375
|||||||||||||
Sbjct: 3235 catggggatcctt 3247
Score = 87.7 bits (44), Expect = 1e-014
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||||||||| ||||||||||||||||| || | |||||||||| |||||||||||
Sbjct: 5335 ttggccactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaaga 5394
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| || || |||||||| || ||||| || ||||||||| | ||||||||| | |||||||
Sbjct: 5395 atgatgatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggt 5454
Query: 835 tcaacaagaatctgaa 850
| || ||||| |||||
Sbjct: 5455 ttaataagaacctgaa 5470
Score = 77.8 bits (39), Expect = 1e-011
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 7750 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 7809
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 7810 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 7869
Query: 252 gccgccgtcgtcctc 266
|||||||||||||||
Sbjct: 7870 gccgccgtcgtcctc 7884
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 4420 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 4479
Query: 606 atcaaag 612
|| ||||
Sbjct: 4480 atgaaag 4486
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggag 486
||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 9556 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggag 9601
Score = 52.0 bits (26), Expect = 7e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 4212 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 4271
Query: 501 gctgcagggtattgctggggtg 522
|||| ||| |||||||||||||
Sbjct: 4272 gctgtaggttattgctggggtg 4293
Score = 50.1 bits (25), Expect = 0.003
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 611 agaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccgga 670
||||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 4581 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 4640
Query: 671 gctaatcaagcagttcgagcaggtcctttctttgaactcaggggt 715
| | ||||||||||||||||| ||||||| || ||||||||
Sbjct: 4641 agtggtgaagcagttcgagcaggttctttcttcaaagtcaggggt 4685
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 119 bits (60), Expect = 3e-024
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 570956 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 571015
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 571016 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 571075
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcgg 283
||||||||||||||| | |||| ||||||||
Sbjct: 571076 gccgccgtcgtcctcatctccgatgtcttcgg 571107
Score = 97.6 bits (49), Expect = 1e-017
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 303 aggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttcttt 362
||||| ||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 572189 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 572248
Query: 363 catggggatcctt 375
|||||||||||||
Sbjct: 572249 catggggatcctt 572261
Score = 87.7 bits (44), Expect = 1e-014
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||||||||| ||||||||||||||||| || | |||||||||| |||||||||||
Sbjct: 574349 ttggccactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaaga 574408
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| || || |||||||| || ||||| || ||||||||| | ||||||||| | |||||||
Sbjct: 574409 atgatgatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggt 574468
Query: 835 tcaacaagaatctgaa 850
| || ||||| |||||
Sbjct: 574469 ttaataagaacctgaa 574484
Score = 83.8 bits (42), Expect = 2e-013
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | ||||||||||| ||| ||||||||
Sbjct: 567816 ttggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaagg 567875
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| ||||| || ||||| || ||||| || ||||||||| | || |||||| |||||||||
Sbjct: 567876 atgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactggt 567935
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 567936 ttaataagaa 567945
Score = 81.8 bits (41), Expect = 7e-013
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 720 cacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgac 779
|||||||||||||| ||||| || || | |||||||||| ||||||||||| |||||
Sbjct: 583985 cacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaatcacgat 584044
Query: 780 gacgcagctgccgtgaagagtgctgaggaagcc 812
|| ||||||||||| ||||| ||||||||||||
Sbjct: 584045 gatgcagctgccgtcaagagcgctgaggaagcc 584077
Score = 77.8 bits (39), Expect = 1e-011
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 576764 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 576823
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 576824 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 576883
Query: 252 gccgccgtcgtcctc 266
|||||||||||||||
Sbjct: 576884 gccgccgtcgtcctc 576898
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 573434 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 573493
Query: 606 atcaaag 612
|| ||||
Sbjct: 573494 atgaaag 573500
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggag 486
||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 578570 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggag 578615
Score = 52.0 bits (26), Expect = 7e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 573226 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 573285
Query: 501 gctgcagggtattgctggggtg 522
|||| ||| |||||||||||||
Sbjct: 573286 gctgtaggttattgctggggtg 573307
Score = 50.1 bits (25), Expect = 0.003
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 611 agaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccgga 670
||||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 573595 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 573654
Query: 671 gctaatcaagcagttcgagcaggtcctttctttgaactcaggggt 715
| | ||||||||||||||||| ||||||| || ||||||||
Sbjct: 573655 agtggtgaagcagttcgagcaggttctttcttcaaagtcaggggt 573699
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 119 bits (60), Expect = 3e-024
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 1678546 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 1678605
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 1678606 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 1678665
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcgg 283
||||||||||||||| | |||| ||||||||
Sbjct: 1678666 gccgccgtcgtcctcatctccgatgtcttcgg 1678697
Score = 97.6 bits (49), Expect = 1e-017
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 303 aggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttcttt 362
||||| ||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 1679779 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 1679838
Query: 363 catggggatcctt 375
|||||||||||||
Sbjct: 1679839 catggggatcctt 1679851
Score = 87.7 bits (44), Expect = 1e-014
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||||||||| ||||||||||||||||| || | |||||||||| |||||||||||
Sbjct: 1681939 ttggccactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaaga 1681998
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| || || |||||||| || ||||| || ||||||||| | ||||||||| | |||||||
Sbjct: 1681999 atgatgatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggt 1682058
Query: 835 tcaacaagaatctgaa 850
| || ||||| |||||
Sbjct: 1682059 ttaataagaacctgaa 1682074
Score = 83.8 bits (42), Expect = 2e-013
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | ||||||||||| ||| ||||||||
Sbjct: 1675207 ttggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaagg 1675266
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| ||||| || ||||| || ||||| || ||||||||| | || |||||| |||||||||
Sbjct: 1675267 atgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactggt 1675326
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 1675327 ttaataagaa 1675336
Score = 81.8 bits (41), Expect = 7e-013
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 720 cacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgac 779
|||||||||||||| ||||| || || | |||||||||| ||||||||||| |||||
Sbjct: 1690469 cacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaatcacgat 1690528
Query: 780 gacgcagctgccgtgaagagtgctgaggaagcc 812
|| ||||||||||| ||||| ||||||||||||
Sbjct: 1690529 gatgcagctgccgtcaagagcgctgaggaagcc 1690561
Score = 77.8 bits (39), Expect = 1e-011
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 1684354 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 1684413
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 1684414 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 1684473
Query: 252 gccgccgtcgtcctc 266
|||||||||||||||
Sbjct: 1684474 gccgccgtcgtcctc 1684488
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 1681024 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 1681083
Query: 606 atcaaag 612
|| ||||
Sbjct: 1681084 atgaaag 1681090
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggag 486
||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 1686160 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggag 1686205
Score = 52.0 bits (26), Expect = 7e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 1680816 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 1680875
Query: 501 gctgcagggtattgctggggtg 522
|||| ||| |||||||||||||
Sbjct: 1680876 gctgtaggttattgctggggtg 1680897
Score = 50.1 bits (25), Expect = 0.003
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 611 agaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccgga 670
||||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 1681185 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 1681244
Query: 671 gctaatcaagcagttcgagcaggtcctttctttgaactcaggggt 715
| | ||||||||||||||||| ||||||| || ||||||||
Sbjct: 1681245 agtggtgaagcagttcgagcaggttctttcttcaaagtcaggggt 1681289
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 119 bits (60), Expect = 3e-024
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 18978859 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 18978918
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 18978919 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 18978978
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcgg 283
||||||||||||||| | |||| ||||||||
Sbjct: 18978979 gccgccgtcgtcctcatctccgatgtcttcgg 18979010
Score = 97.6 bits (49), Expect = 1e-017
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 303 aggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttcttt 362
||||| ||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 18980092 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 18980151
Query: 363 catggggatcctt 375
|||||||||||||
Sbjct: 18980152 catggggatcctt 18980164
Score = 87.7 bits (44), Expect = 1e-014
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||||||||| ||||||||||||||||| || | |||||||||| |||||||||||
Sbjct: 18982252 ttggccactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaaga 18982311
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| || || |||||||| || ||||| || ||||||||| | ||||||||| | |||||||
Sbjct: 18982312 atgatgatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggt 18982371
Query: 835 tcaacaagaatctgaa 850
| || ||||| |||||
Sbjct: 18982372 ttaataagaacctgaa 18982387
Score = 83.8 bits (42), Expect = 2e-013
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | ||||||||||| ||| ||||||||
Sbjct: 18975520 ttggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaagg 18975579
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| ||||| || ||||| || ||||| || ||||||||| | || |||||| |||||||||
Sbjct: 18975580 atgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactggt 18975639
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 18975640 ttaataagaa 18975649
Score = 81.8 bits (41), Expect = 7e-013
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 720 cacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgac 779
|||||||||||||| ||||| || || | |||||||||| ||||||||||| |||||
Sbjct: 18990782 cacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaatcacgat 18990841
Query: 780 gacgcagctgccgtgaagagtgctgaggaagcc 812
|| ||||||||||| ||||| ||||||||||||
Sbjct: 18990842 gatgcagctgccgtcaagagcgctgaggaagcc 18990874
Score = 77.8 bits (39), Expect = 1e-011
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 18984667 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 18984726
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 18984727 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 18984786
Query: 252 gccgccgtcgtcctc 266
|||||||||||||||
Sbjct: 18984787 gccgccgtcgtcctc 18984801
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 18981337 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 18981396
Query: 606 atcaaag 612
|| ||||
Sbjct: 18981397 atgaaag 18981403
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggag 486
||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 18986473 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggag 18986518
Score = 52.0 bits (26), Expect = 7e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 18981129 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 18981188
Query: 501 gctgcagggtattgctggggtg 522
|||| ||| |||||||||||||
Sbjct: 18981189 gctgtaggttattgctggggtg 18981210
Score = 50.1 bits (25), Expect = 0.003
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 611 agaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccgga 670
||||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 18981498 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 18981557
Query: 671 gctaatcaagcagttcgagcaggtcctttctttgaactcaggggt 715
| | ||||||||||||||||| ||||||| || ||||||||
Sbjct: 18981558 agtggtgaagcagttcgagcaggttctttcttcaaagtcaggggt 18981602
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 119 bits (60), Expect = 3e-024
Identities = 129/152 (84%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || | |||||||||||| ||||| ||||
Sbjct: 19265553 atggcgagcccgcagtgctgcgcgaacccaccgacgctgaacccggccggcggggagggg 19265612
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 19265613 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 19265672
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcgg 283
||||||||||||||| | |||| ||||||||
Sbjct: 19265673 gccgccgtcgtcctcatctccgatgtcttcgg 19265704
Score = 97.6 bits (49), Expect = 1e-017
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 303 aggaacatagccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttcttt 362
||||| ||||||||||||||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 19266786 aggaagatagccgacaaagttgcctcgtctggatactttgttgtggtgccagatttctta 19266845
Query: 363 catggggatcctt 375
|||||||||||||
Sbjct: 19266846 catggggatcctt 19266858
Score = 87.7 bits (44), Expect = 1e-014
Identities = 113/136 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||||||||| ||||||||||||||||| || | |||||||||| |||||||||||
Sbjct: 19268946 ttggccactttgtcaagatcttccctggggttgaacatggatggactgtgagatacaaga 19269005
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| || || |||||||| || ||||| || ||||||||| | ||||||||| | |||||||
Sbjct: 19269006 atgatgatgcagctgctgtcaagagcgccgaggaagccctggcggacatgattgactggt 19269065
Query: 835 tcaacaagaatctgaa 850
| || ||||| |||||
Sbjct: 19269066 ttaataagaacctgaa 19269081
Score = 83.8 bits (42), Expect = 2e-013
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | ||||||||||| ||| ||||||||
Sbjct: 19262413 ttggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaagg 19262472
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| ||||| || ||||| || ||||| || ||||||||| | || |||||| |||||||||
Sbjct: 19262473 atgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactggt 19262532
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 19262533 ttaataagaa 19262542
Score = 81.8 bits (41), Expect = 7e-013
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 720 cacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgac 779
|||||||||||||| ||||| || || | |||||||||| ||||||||||| |||||
Sbjct: 19278582 cacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaatcacgat 19278641
Query: 780 gacgcagctgccgtgaagagtgctgaggaagcc 812
|| ||||||||||| ||||| ||||||||||||
Sbjct: 19278642 gatgcagctgccgtcaagagcgctgaggaagcc 19278674
Score = 77.8 bits (39), Expect = 1e-011
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 19271361 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 19271420
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 19271421 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 19271480
Query: 252 gccgccgtcgtcctc 266
|||||||||||||||
Sbjct: 19271481 gccgccgtcgtcctc 19271495
Score = 69.9 bits (35), Expect = 3e-009
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 546 aaagctcatgagatccaggctgctgtgctgttgcacccttcttttgttaccgttgacgat 605
||||||||||||||||||||||||||| ||| ||||| |||||||| || ||||| |||
Sbjct: 19268031 aaagctcatgagatccaggctgctgtgatgtgtcacccctcttttgtgactgttgatgat 19268090
Query: 606 atcaaag 612
|| ||||
Sbjct: 19268091 atgaaag 19268097
Score = 60.0 bits (30), Expect = 3e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggag 486
||||||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 19273167 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggag 19273212
Score = 52.0 bits (26), Expect = 7e-004
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| | |||| | |||||| ||||| |||||||| ||||||||| | ||||
Sbjct: 19267823 tttgaagaggcgaaaccaattattgccgctctgaaggagaaaggagtgtctagtattggg 19267882
Query: 501 gctgcagggtattgctggggtg 522
|||| ||| |||||||||||||
Sbjct: 19267883 gctgtaggttattgctggggtg 19267904
Score = 50.1 bits (25), Expect = 0.003
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 611 agaggtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccgga 670
||||||||| ||| ||||| |||| || |||||||| ||||| ||||||||||| ||
Sbjct: 19268192 agaggtcaaatgcccaattgctatacttggagctgaaattgatcgtatgtccccaccaga 19268251
Query: 671 gctaatcaagcagttcgagcaggtcctttctttgaactcaggggt 715
| | ||||||||||||||||| ||||||| || ||||||||
Sbjct: 19268252 agtggtgaagcagttcgagcaggttctttcttcaaagtcaggggt 19268296
>gb|CV723245.1|CV723245 root--02-P10.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-P10, mRNA sequence
Length = 473
Score = 109 bits (55), Expect = 3e-021
Identities = 193/239 (80%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 61 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 120
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 121 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 180
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||||| ||| || || ||||| || | ||||||| |||
Sbjct: 181 gccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgaggaagata 240
Query: 312 gccgacaaagttgcttcgtcagggtactttgttgtggtaccagatttctttcatgggga 370
|| ||||| ||||||| || || ||||| |||||||| ||||||||| ||||||||||
Sbjct: 241 gcagacaaggttgctttgtttggttacttcgttgtggtgccagatttccttcatgggga 299
Score = 73.8 bits (37), Expect = 2e-010
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 441 tttgaagagacaaaacaagttattggggctctaaaggagaagggagtgtctgctgttgga 500
||||||||| |||||| |||||||| ||||||||||||||||||| ||| | ||
Sbjct: 367 tttgaagaggcaaaaccagttattgccgctctaaaggagaagggagcatctttcatcggg 426
Query: 501 gctgcagggtattgctggggtgcaaaggttgttgtggagtt 541
|||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 427 gctgcaggttattgttggggtgcaaaggtagtggtggagtt 467
>gb|AU166756.1|AU166756 AU166756 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50222, mRNA sequence
Length = 456
Score = 99.6 bits (50), Expect = 3e-018
Identities = 161/198 (81%)
Strand = Plus / Plus
Query: 615 gtcaagtgcgcaatttctatcctcggagctgagattgacaaaatgtccccaccggagcta 674
||||| ||| |||||||||| || || ||||| |||||||| | ||| ||||| |||||
Sbjct: 4 gtcaaatgcccaatttctatacttggtgctgaaattgacaagacgtctccaccagagctg 63
Query: 675 atcaagcagttcgagcaggtcctttctttgaactcaggggttggccacttcgtcaagatc 734
| |||||||| |||||| |||||||| ||| | | | ||| ||||||||||||||
Sbjct: 64 ttaaagcagtttgagcagatcctttctcctaaccccgagattgctcacttcgtcaagatt 123
Query: 735 ttccctggtgtggcgcatggatggagcgtgagatacaaccacgacgacgcagctgccgtg 794
||||| || || | |||||||||| ||||||||||| ||||| || |||||||||||
Sbjct: 124 ttccccggcgtagagcatggatgggctgtgagatacaatcacgatgatgcagctgccgtc 183
Query: 795 aagagtgctgaggaagcc 812
||||| ||||||||||||
Sbjct: 184 aagagcgctgaggaagcc 201
>gb|D47744.1|D47744 RICS13413A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 208
Score = 91.7 bits (46), Expect = 8e-016
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||||||| | |||||||||| ||||| || |||||||||||| ||||| ||||
Sbjct: 21 atggcgagcccgcagtgctgcgcgaacccaccgangctgaacccggccggcggggagggg 80
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||| || || |||||||||||| ||||||| |||||||||||| ||| ||| ||||||
Sbjct: 81 aaggtggtggagagcttcggcgggatcaaggcgtacgtcgccggcgccgcggagtccaag 140
Query: 252 gccgccgt 259
|||| |||
Sbjct: 141 gccgncgt 148
>gb|AACV01012111.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012111, whole
genome shotgun sequence
Length = 25687
Score = 83.8 bits (42), Expect = 2e-013
Identities = 108/130 (83%)
Strand = Plus / Minus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | ||||||||||| ||| ||||||||
Sbjct: 1348 ttggtcactttgtcaagatcttccctggggtcgagcatggatggaccgtaagatacaagg 1289
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| ||||| || ||||| || ||||| || ||||||||| | || |||||| |||||||||
Sbjct: 1288 atgacgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatcgactggt 1229
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 1228 ttaataagaa 1219
>gb|AACV01012113.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012113, whole
genome shotgun sequence
Length = 69919
Score = 81.8 bits (41), Expect = 7e-013
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 720 cacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaaccacgac 779
|||||||||||||| ||||| || || | |||||||||| ||||||||||| |||||
Sbjct: 2046 cacttcgtcaagattttccccggcgtagagcatggatgggctgtgagatacaatcacgat 2105
Query: 780 gacgcagctgccgtgaagagtgctgaggaagcc 812
|| ||||||||||| ||||| ||||||||||||
Sbjct: 2106 gatgcagctgccgtcaagagcgctgaggaagcc 2138
>gb|AU166755.1|AU166755 AU166755 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50222, mRNA sequence
Length = 421
Score = 79.8 bits (40), Expect = 3e-012
Identities = 157/196 (80%)
Strand = Plus / Plus
Query: 132 atggcgagctctcagtgctgcgataacccgccagccctgaacccggcctgcgggaagggc 191
||||| ||||| |||||||| || |||||||| || ||| |||||||| |||| ||||
Sbjct: 218 atggcaagctcgcagtgctgggagaacccgccggcgctggacccggccggcggagggggc 277
Query: 192 aaggtcgtcgacagcttcggcgggctcaaggcctacgtcgccggccccgaggactccaag 251
||||||||| | ||||||||||| ||||| |||||||| ||| | | | |||||||
Sbjct: 278 gaggtcgtcggcgacttcggcgggcagaaggcgtacgtcgctggctcggccggctccaag 337
Query: 252 gccgccgtcgtcctcgttgccgacgtcttcggattcgaagcgccgattatgaggaacata 311
||||||||||||||| | |||||| ||| || || ||||| || | ||||||| |||
Sbjct: 338 gccgccgtcgtcctcatctccgacgcctttggctttgaagccccaaacctgaggaagata 397
Query: 312 gccgacaaagttgctt 327
|| ||||| |||||||
Sbjct: 398 gcagacaaggttgctt 413
>gb|CL522875.1|CL522875 SAN1G04 Flanking Sequence Tag of Oryza sativa T-DNA insertion lines
Oryza sativa (japonica cultivar-group) genomic, DNA
sequence
Length = 236
Score = 60.0 bits (30), Expect = 3e-006
Identities = 105/130 (80%)
Strand = Plus / Minus
Query: 715 ttggccacttcgtcaagatcttccctggtgtggcgcatggatggagcgtgagatacaacc 774
|||| ||||| ||||||||||||||||| || | |||||||||| ||| ||||||||
Sbjct: 147 ttggtcactttgtcaagatcttccctggggtcgagcatggatggtccgtaagatacaagg 88
Query: 775 acgacgacgcagctgccgtgaagagtgctgaggaagcctttgcggacatgctcgactggt 834
| | ||| || ||||| || ||||| || ||||||||| | || |||||| | |||||||
Sbjct: 87 atgccgatgccgctgctgtcaagagcgccgaggaagccctggcagacatgatggactggt 28
Query: 835 tcaacaagaa 844
| || |||||
Sbjct: 27 ttaataagaa 18
>gb|AU070505.1|AU070505 AU070505 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S0631_2A, mRNA sequence
Length = 665
Score = 44.1 bits (22), Expect = 0.16
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 ccgacgtcttcggattcgaagcgccgattatgaggaacatagccgacaaagttg 324
||||| ||||||||||||||||||| | ||||||| ||||| || |||||||
Sbjct: 164 ccgacatcttcggattcgaagcgccattgctgaggaaaatagctgataaagttg 217
>dbj|AK059753.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B07, full
insert sequence
Length = 1135
Score = 44.1 bits (22), Expect = 0.16
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 271 ccgacgtcttcggattcgaagcgccgattatgaggaacatagccgacaaagttg 324
||||| ||||||||||||||||||| | ||||||| ||||| || |||||||
Sbjct: 262 ccgacatcttcggattcgaagcgccattgctgaggaaaatagctgataaagttg 315
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,445,494
Number of Sequences: 438736
Number of extensions: 1445494
Number of successful extensions: 11370
Number of sequences better than 0.5: 31
Number of HSP's better than 0.5 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11189
Number of HSP's gapped (non-prelim): 162
length of query: 1095
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1074
effective length of database: 2,791,206,460
effective search space: 2997755738040
effective search space used: 2997755738040
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)