BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2576612.2.1
(845 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA756379.1|CA756379 BR030041000_PLATE_C02_11_008.ab1 OA ... 622 e-176
gb|CF338289.1|CF338289 RCL1--01-D12.g1 Regenerated callus l... 622 e-176
gb|CF338701.1|CF338701 RCL1--02-I06.g1 Regenerated callus l... 622 e-176
gb|CF338857.1|CF338857 RCL1--02-P21.g1 Regenerated callus l... 622 e-176
gb|CF339226.1|CF339226 RCL1--04-D06.g1 Regenerated callus l... 622 e-176
gb|CF339597.1|CF339597 RCL1--05-F15.g1 Regenerated callus l... 622 e-176
gb|CF339603.1|CF339603 RCL1--05-F24.g1 Regenerated callus l... 622 e-176
gb|CF339937.1|CF339937 RCL1--06-G23.g1 Regenerated callus l... 622 e-176
gb|CF340185.1|CF340185 RCL1--07-D11.g1 Regenerated callus l... 622 e-176
gb|CF340487.1|CF340487 RCL1--08-C22.g1 Regenerated callus l... 622 e-176
gb|CF339765.1|CF339765 RCL1--05-N24.g1 Regenerated callus l... 617 e-174
gb|CF340084.1|CF340084 RCL1--06-O10.g1 Regenerated callus l... 617 e-174
gb|CF332562.1|CF332562 JMT--01-B23.b1 AtJMT-overexpressing ... 615 e-173
gb|CF338934.1|CF338934 RCL1--03-E07.g1 Regenerated callus l... 615 e-173
gb|CF339785.1|CF339785 RCL1--05-O22.g1 Regenerated callus l... 613 e-173
ref|XM_476895.1| Oryza sativa (japonica cultivar-group), mRNA 611 e-172
gb|CF338469.1|CF338469 RCL1--01-M10.g1 Regenerated callus l... 605 e-170
gb|CF340438.1|CF340438 RCL1--08-A12.g1 Regenerated callus l... 591 e-166
gb|CF340291.1|CF340291 RCL1--07-J01.g1 Regenerated callus l... 579 e-163
gb|CF338258.1|CF338258 RCL1--01-B21.g1 Regenerated callus l... 567 e-159
gb|CF291958.1|CF291958 14ROOT--02-J15.g1 Rice root plasmid ... 541 e-151
gb|CF305374.1|CF305374 CLD1--01-I15.b1 Rice cold treated le... 531 e-148
dbj|AK121716.1| Oryza sativa (japonica cultivar-group) cDNA... 531 e-148
ref|XM_469972.1| Oryza sativa (japonica cultivar-group), mRNA 531 e-148
gb|CD670786.1|CD670786 OsMR203 5MT resistant rice mutant cD... 529 e-148
dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA... 523 e-146
gb|CF334419.1|CF334419 JMT--03-L08.g1 AtJMT-overexpressing ... 509 e-142
gb|AU166787.1|AU166787 AU166787 Rice callus (2001) Oryza sa... 504 e-140
gb|CF332563.1|CF332563 JMT--01-B23.g1 AtJMT-overexpressing ... 504 e-140
gb|CF337854.1|CF337854 JMT--08-H14.b1 AtJMT-overexpressing ... 482 e-133
gb|AU181587.1|AU181587 AU181587 Rice callus (2001) Oryza sa... 478 e-132
gb|CV728891.1|CV728891 FLO--01-H06.b1 Rice flower lambda ph... 458 e-126
gb|CV724860.1|CV724860 14Salt--01-K15.b1 Salt treated rice ... 450 e-124
gb|CV730809.1|CV730809 FLO--04-I19.b1 Rice flower lambda ph... 444 e-122
gb|C74747.1|C74747 C74747 Rice cDNA from immature leaf incl... 440 e-121
gb|CV721418.1|CV721418 YBH--04-A17.b1 Rice before heading y... 432 e-118
gb|AU057418.1|AU057418 AU057418 Oryza sativa mature leaf Ni... 430 e-118
gb|CV724705.1|CV724705 14Salt--01-G24.b1 Salt treated rice ... 430 e-118
gb|CF338268.1|CF338268 RCL1--01-C13.g1 Regenerated callus l... 422 e-115
gb|C28207.1|C28207 C28207 Rice callus cDNA Oryza sativa (ja... 418 e-114
gb|AU033240.1|AU033240 AU033240 Rice shoot Oryza sativa (ja... 373 e-100
gb|CV724706.1|CV724706 14Salt--01-G24.g1 Salt treated rice ... 345 2e-092
gb|CV730810.1|CV730810 FLO--04-I19.g1 Rice flower lambda ph... 341 4e-091
gb|CF291957.1|CF291957 14ROOT--02-J15.b1 Rice root plasmid ... 337 6e-090
gb|CF337855.1|CF337855 JMT--08-H14.g1 AtJMT-overexpressing ... 337 6e-090
gb|AACV01015303.1| Oryza sativa (japonica cultivar-group) c... 333 9e-089
dbj|AP003861.2| Oryza sativa (japonica cultivar-group) geno... 333 9e-089
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 333 9e-089
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 333 9e-089
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 333 9e-089
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 333 9e-089
gb|AU057419.1|AU057419 AU057419 Oryza sativa mature leaf Ni... 329 1e-087
gb|AU068754.1|AU068754 AU068754 Rice callus Oryza sativa (j... 329 1e-087
gb|CV728892.1|CV728892 FLO--01-H06.g1 Rice flower lambda ph... 325 2e-086
gb|CV724861.1|CV724861 14Salt--01-K15.g1 Salt treated rice ... 323 9e-086
gb|D16075.1|D16075 RICC2880A Rice callus Oryza sativa (japo... 315 2e-083
gb|C27669.2|C27669 C27669 Rice callus cDNA Oryza sativa (ja... 291 3e-076
gb|CV729714.1|CV729714 FLO--02-N20.b1 Rice flower lambda ph... 276 2e-071
gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 ... 276 2e-071
gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 ... 276 2e-071
gb|AACV01008095.1| Oryza sativa (japonica cultivar-group) c... 276 2e-071
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 276 2e-071
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 276 2e-071
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 276 2e-071
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 276 2e-071
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 276 2e-071
gb|AU173067.1|AU173067 AU173067 Rice root Oryza sativa (jap... 274 7e-071
gb|AU097526.1|AU097526 AU097526 Rice shoot Oryza sativa (ja... 190 8e-046
gb|CF334418.1|CF334418 JMT--03-L08.b1 AtJMT-overexpressing ... 174 5e-041
gb|CB681014.1|CB681014 OSJNEf06L19.f OSJNEf Oryza sativa (j... 145 4e-032
gb|CX728428.1|CX728428 OSJNEf06L19.r OSJNEf Oryza sativa (j... 145 4e-032
gb|AU031252.1|AU031252 AU031252 Rice cDNA from immature lea... 117 1e-023
gb|AQ868431.1|AQ868431 nbeb0027D08r CUGI Rice BAC Library (... 42 0.48
dbj|AK059157.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.48
gb|AACV01027343.1| Oryza sativa (japonica cultivar-group) C... 42 0.48
gb|AACV01028355.1| Oryza sativa (japonica cultivar-group) C... 42 0.48
>gb|CA756379.1|CA756379 BR030041000_PLATE_C02_11_008.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030041000_PLATE_C02_11_008.ab1 similar to 40S
ribosomal protein S15 [Elaeis oleifera], mRNA sequence
Length = 752
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 70 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 129
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 130 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 189
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 190 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 249
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 250 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 309
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 310 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 369
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 370 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 429
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 430 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 489
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 490 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 537
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 620 caagttatatacctaaggcattttgttctgttt 652
>gb|CF338289.1|CF338289 RCL1--01-D12.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--01-D12, mRNA sequence
Length = 649
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF338701.1|CF338701 RCL1--02-I06.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--02-I06, mRNA sequence
Length = 622
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF338857.1|CF338857 RCL1--02-P21.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--02-P21, mRNA sequence
Length = 623
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF339226.1|CF339226 RCL1--04-D06.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--04-D06, mRNA sequence
Length = 570
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF339597.1|CF339597 RCL1--05-F15.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-F15, mRNA sequence
Length = 663
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 102 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 161
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 162 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 221
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 222 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 281
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 282 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 341
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 342 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 401
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 402 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 461
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 462 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 521
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 522 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 569
>gb|CF339603.1|CF339603 RCL1--05-F24.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-F24, mRNA sequence
Length = 647
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF339937.1|CF339937 RCL1--06-G23.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--06-G23, mRNA sequence
Length = 624
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF340185.1|CF340185 RCL1--07-D11.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--07-D11, mRNA sequence
Length = 651
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF340487.1|CF340487 RCL1--08-C22.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--08-C22, mRNA sequence
Length = 565
Score = 622 bits (314), Expect = e-176
Identities = 430/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF339765.1|CF339765 RCL1--05-N24.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-N24, mRNA sequence
Length = 696
Score = 617 bits (311), Expect = e-174
Identities = 429/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 134 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 193
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 194 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 253
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 254 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 313
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 314 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 373
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 374 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 433
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 434 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 493
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 494 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 553
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| | ||||||
Sbjct: 554 cggtattggtgccacccactcctctcggttcatccctctcanatgagt 601
>gb|CF340084.1|CF340084 RCL1--06-O10.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--06-O10, mRNA sequence
Length = 647
Score = 617 bits (311), Expect = e-174
Identities = 429/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| | ||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcanatgagt 552
>gb|CF332562.1|CF332562 JMT--01-B23.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--01-B23, mRNA sequence
Length = 659
Score = 615 bits (310), Expect = e-173
Identities = 429/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 97 catggcggacgtcgacgtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 156
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 157 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 216
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 217 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 276
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 277 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 336
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 337 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 396
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || ||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 397 aagcatcgtcggtgtctgcaatggcaagaccttcaaccaggttgagattaagcctgagat 456
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 457 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 516
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 517 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 564
>gb|CF338934.1|CF338934 RCL1--03-E07.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--03-E07, mRNA sequence
Length = 556
Score = 615 bits (310), Expect = e-173
Identities = 429/468 (91%), Gaps = 3/468 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | | |||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcacaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
||||||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctctcaaatgagt 552
>gb|CF339785.1|CF339785 RCL1--05-O22.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--05-O22, mRNA sequence
Length = 633
Score = 613 bits (309), Expect = e-173
Identities = 422/459 (91%), Gaps = 3/459 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 85 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 144
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 145 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 204
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 205 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 264
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 265 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 324
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 325 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 384
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 444
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 445 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 504
Query: 584 cggtattggtgccactcactcctcgcggtttatccctct 622
||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 505 cggtattggtgccacccactcctctcggttcatccctct 543
>ref|XM_476895.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 669
Score = 611 bits (308), Expect = e-172
Identities = 424/462 (91%), Gaps = 3/462 (0%)
Strand = Plus / Plus
Query: 171 gcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggacgttc 227
||||||||||| || ||| |||||||||||||||| || || |||||||||||||||
Sbjct: 208 gcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgttc 267
Query: 228 cgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacgac 287
|||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||
Sbjct: 268 cgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatgac 327
Query: 288 ctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagaggaag 347
||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 328 ctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagaggaag 387
Query: 348 cccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaag 407
|||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 388 cccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcgagaag 447
Query: 408 ccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggagc 467
||||||||||||| |||||| ||||||||||||||||||||||| |||||||| || |||
Sbjct: 448 ccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcggaagc 507
Query: 468 attgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgatt 527
|| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 508 atcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagatgatt 567
Query: 528 ggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccggt 587
|| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 568 ggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcccggt 627
Query: 588 attggtgccactcactcctcgcggtttatccctctgaaatga 629
||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 628 attggtgccacccactcctctcggttcatccctctcaaatga 669
>gb|CF338469.1|CF338469 RCL1--01-M10.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--01-M10, mRNA sequence
Length = 560
Score = 605 bits (305), Expect = e-170
Identities = 421/459 (91%), Gaps = 3/459 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 82 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 141
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 142 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 201
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 202 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 261
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 262 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 321
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
|||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 322 taagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 381
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 382 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 441
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 442 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 501
Query: 584 cggtattggtgccactcactcctcgcggtttatccctct 622
||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 502 cggtattggtgccacccactcctctcggttcatccctct 540
>gb|CF340438.1|CF340438 RCL1--08-A12.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--08-A12, mRNA sequence
Length = 521
Score = 591 bits (298), Expect = e-166
Identities = 405/440 (92%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 82 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 141
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 142 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 201
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 202 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 261
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 262 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 321
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 322 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 381
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 382 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 441
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 442 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 501
Query: 584 cggtattggtgccactcact 603
||||||||||||||| ||||
Sbjct: 502 cggtattggtgccacccact 521
>gb|CF340291.1|CF340291 RCL1--07-J01.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--07-J01, mRNA sequence
Length = 556
Score = 579 bits (292), Expect = e-163
Identities = 405/442 (91%), Gaps = 3/442 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 115 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 174
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 175 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 234
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | | |||||||||||||||| |||||||
Sbjct: 235 tgacctcgtccagctcttccccgcgcgcgcccgcataaggttccagaggggtctgaagag 294
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 295 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 354
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| |||||||||||||||||||| || |||||||| ||
Sbjct: 355 gaagccagagccagtgaggacccacctccgcaacatgatcattgtgcctgagatgatcgg 414
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 415 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 474
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 475 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 534
Query: 584 cggtattggtgccactcactcc 605
||||||||||||||| ||||||
Sbjct: 535 cggtattggtgccacccactcc 556
>gb|CF338258.1|CF338258 RCL1--01-B21.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--01-B21, mRNA sequence
Length = 526
Score = 567 bits (286), Expect = e-159
Identities = 390/424 (91%), Gaps = 3/424 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 103 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 162
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 163 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 222
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 223 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 282
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 283 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 342
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 343 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 402
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 403 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 462
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcc 583
|||||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 463 gattggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcc 522
Query: 584 cggt 587
||||
Sbjct: 523 cggt 526
>gb|CF291958.1|CF291958 14ROOT--02-J15.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-J15, mRNA sequence
Length = 483
Score = 541 bits (273), Expect = e-151
Identities = 371/403 (92%), Gaps = 3/403 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 81 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 140
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 141 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 200
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 201 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 260
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 261 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 320
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 321 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 380
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 440
Query: 524 gattggccactatcttgcagagttctccatttcctacaagccg 566
|||||| ||||| ||||| ||||||||||| ||||||||||||
Sbjct: 441 gattggtcactaccttgcggagttctccatctcctacaagccg 483
>gb|CF305374.1|CF305374 CLD1--01-I15.b1 Rice cold treated leaf plasmid cDNA library (CLD1)
Oryza sativa (japonica cultivar-group) cDNA clone
CLD1--01-I15, mRNA sequence
Length = 566
Score = 531 bits (268), Expect = e-148
Identities = 411/458 (89%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 78 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 137
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 138 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 197
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 198 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 257
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 258 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 317
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 318 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 377
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 437
Query: 525 attggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggccc 584
||||||||||| || |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 438 attggccactacctcgcagagttctccatctcgtacaagccagtcaagcacggtaggcct 497
Query: 585 ggtattggtgccactcactcctcgcggtttatccctct 622
||||||||||| || |||||||| ||||||||||||||
Sbjct: 498 ggtattggtgctacccactcctcacggtttatccctct 535
>dbj|AK121716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079G18, full
insert sequence
Length = 758
Score = 531 bits (268), Expect = e-148
Identities = 411/458 (89%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 98 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 157
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 158 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 217
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 218 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 277
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 278 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 337
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 338 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 397
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 457
Query: 525 attggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggccc 584
||||||||||| || |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 458 attggccactacctcgcagagttctccatctcgtacaagccagtcaagcacggtaggcct 517
Query: 585 ggtattggtgccactcactcctcgcggtttatccctct 622
||||||||||| || |||||||| ||||||||||||||
Sbjct: 518 ggtattggtgctacccactcctcacggtttatccctct 555
>ref|XM_469972.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 713
Score = 531 bits (268), Expect = e-148
Identities = 411/458 (89%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 69 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 128
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 129 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 188
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 189 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 248
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 249 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 308
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 309 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 368
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 428
Query: 525 attggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggccc 584
||||||||||| || |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 429 attggccactacctcgcagagttctccatctcgtacaagccagtcaagcacggtaggcct 488
Query: 585 ggtattggtgccactcactcctcgcggtttatccctct 622
||||||||||| || |||||||| ||||||||||||||
Sbjct: 489 ggtattggtgctacccactcctcacggtttatccctct 526
>gb|CD670786.1|CD670786 OsMR203 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 553
Score = 529 bits (267), Expect = e-148
Identities = 381/417 (91%), Gaps = 4/417 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 118 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 177
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||
Sbjct: 178 gttccgcaagtacagctaccggggcgtcgacctcgacgcgctcctcgacatgtccaccga 237
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 238 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 297
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 298 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 357
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
|||||||||||||| || |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 358 gaagccagagccagcgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 417
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 418 aagcatggtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 477
Query: 524 gattggccactatcttgcagagttctccat-ttcctacaagccggtcaagcacggga 579
|||||| ||||| ||||| ||||||||||| | ||||||||||||| ||||||||||
Sbjct: 478 gattggtcactaccttgcggagttctccatctccctacaagccggttaagcacggga 534
>dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B03, full
insert sequence
Length = 1569
Score = 523 bits (264), Expect = e-146
Identities = 410/458 (89%), Gaps = 3/458 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 830 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 889
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
||||||||||||||||||||||| || |||||||| ||||| || |||||||||||||||
Sbjct: 890 ttccgcaagtacagctaccgcggtgtggacctcgacgcgctcctcgacatgtccaccgac 949
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 950 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 1009
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 1010 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 1069
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 1070 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 1129
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 1189
Query: 525 attggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggccc 584
||||||||||| || |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 1190 attggccactacctcgcagagttctccatctcgtacaagccagtcaagcacggtaggcct 1249
Query: 585 ggtattggtgccactcactcctcgcggtttatccctct 622
||||||||||| || |||||||| ||||||||||||||
Sbjct: 1250 ggtattggtgctacccactcctcacggtttatccctct 1287
>gb|CF334419.1|CF334419 JMT--03-L08.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--03-L08, mRNA sequence
Length = 561
Score = 509 bits (257), Expect = e-142
Identities = 410/459 (89%), Gaps = 4/459 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 98 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 157
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 158 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 217
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 218 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 277
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 278 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 337
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 338 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 397
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 457
Query: 525 attggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggccc 584
||||||| ||| || |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 458 attggccgctacctcgcagagttctccatctcgtacaagccagtcaagcacggtaggcct 517
Query: 585 ggtatt-ggtgccactcactcctcgcggtttatccctct 622
|||||| ||||| || |||||||| ||||||||||||||
Sbjct: 518 ggtattgggtgctacccactcctcacggtttatccctct 556
>gb|AU166787.1|AU166787 AU166787 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50348, mRNA sequence
Length = 443
Score = 504 bits (254), Expect = e-140
Identities = 343/372 (92%), Gaps = 3/372 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 70 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 129
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 130 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 189
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 190 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 249
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 250 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 309
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 310 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 369
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagat 523
||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 370 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctgagat 429
Query: 524 gattggccacta 535
|||||| |||||
Sbjct: 430 gattggtcacta 441
>gb|CF332563.1|CF332563 JMT--01-B23.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--01-B23, mRNA sequence
Length = 553
Score = 504 bits (254), Expect = e-140
Identities = 335/362 (92%)
Strand = Plus / Minus
Query: 270 gacatgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccag 329
|||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 549 gacatgtccaccgatgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccag 490
Query: 330 aggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggat 389
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggat 430
Query: 390 gctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtc 449
|| |||| |||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 429 gcccctgctggcgagaagccagagccagtgaggacccacctccgcaacatgatcattgtc 370
Query: 450 cccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgag 509
|| |||||||| || ||||| || ||||||| ||||||||||||||||||||||||||||
Sbjct: 369 cctgagatgatcggaagcatcgtcggtgtctgcaatggcaagaccttcaaccaggttgag 310
Query: 510 atcaagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtc 569
|| ||||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 309 attaagcctgagatgattggtcactaccttgcggagttctccatctcctacaagccggtt 250
Query: 570 aagcacgggaggcccggtattggtgccactcactcctcgcggtttatccctctgaaatga 629
|||||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 249 aagcacggtaggcccggtattggtgccacccactcctctcggttcatccctctcaaatga 190
Query: 630 gt 631
||
Sbjct: 189 gt 188
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 105 caagttatatacctaaggcattttgttctgttt 73
>gb|CF337854.1|CF337854 JMT--08-H14.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--08-H14, mRNA sequence
Length = 561
Score = 482 bits (243), Expect = e-133
Identities = 366/405 (90%), Gaps = 2/405 (0%)
Strand = Plus / Plus
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||
Sbjct: 152 aggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtcc 211
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||
Sbjct: 212 accgacgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctg 271
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 272 aagaggaagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgct 331
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||| |||| |||||| ||| | |||||||||||||| || ||||||
Sbjct: 332 ggtgagaagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatg 391
Query: 459 attgggagcattgtt-ggtgtctacaatggcaagaccttcaaccaggttgagatcaagcc 517
| | ||| ||| || |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 392 a-tcggaacatcgtncngtgtctacaacggcaagaccttcaaccaggttgagatcaagcc 450
Query: 518 tgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacgg 577
|||||||||||||||||| || |||||||||||||| || |||||||| |||||||||||
Sbjct: 451 tgagatgattggccactacctcgcagagttctccatctcgtacaagccagtcaagcacgg 510
Query: 578 gaggcccggtattggtgccactcactcctcgcggtttatccctct 622
||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct: 511 taggcctggtattggtgctacccactcctcacggtttatccctct 555
>gb|AU181587.1|AU181587 AU181587 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C50510, mRNA sequence
Length = 424
Score = 478 bits (241), Expect = e-132
Identities = 327/355 (92%), Gaps = 3/355 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 70 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 129
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 130 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 189
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 190 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 249
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 250 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 309
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 310 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 369
Query: 464 gagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 370 aagcatcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcct 424
>gb|CV728891.1|CV728891 FLO--01-H06.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-H06,
mRNA sequence
Length = 494
Score = 458 bits (231), Expect = e-126
Identities = 350/389 (89%), Gaps = 3/389 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 98 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 157
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 158 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 217
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 218 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 277
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 278 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 337
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 338 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 397
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 457
Query: 525 attggccactatcttgcagagttctccat 553
||||||||||| || ||||||||||||||
Sbjct: 458 attggccactacctcgcagagttctccat 486
>gb|CV724860.1|CV724860 14Salt--01-K15.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-K15, mRNA sequence
Length = 490
Score = 450 bits (227), Expect = e-124
Identities = 349/389 (89%), Gaps = 3/389 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 98 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 157
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 158 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 217
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 218 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 277
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 278 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 337
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 338 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 397
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 398 agcatcgtcggtgtctacaacggcaagaccttcaactaggttgagatcaagcctgagatg 457
Query: 525 attggccactatcttgcagagttctccat 553
||||||||||| || ||||||||||||||
Sbjct: 458 attggccactacctcgcagagttctccat 486
>gb|CV730809.1|CV730809 FLO--04-I19.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-I19,
mRNA sequence
Length = 536
Score = 444 bits (224), Expect = e-122
Identities = 307/335 (91%)
Strand = Plus / Plus
Query: 219 aggacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtcc 278
|||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||
Sbjct: 199 aggacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtcc 258
Query: 279 accgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttg 338
|||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||
Sbjct: 259 accgacgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctg 318
Query: 339 aagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtc 398
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 319 aagaggaagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgct 378
Query: 399 ggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatg 458
|| |||||||||||||| |||| |||||| ||| | |||||||||||||| || ||||||
Sbjct: 379 ggtgagaagccagagcctgtgaggacccacctcaggaacatgatcattgtgccngagatg 438
Query: 459 attgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcct 518
|| || ||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 439 atcggaagcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcct 498
Query: 519 gagatgattggccactatcttgcagagttctccat 553
||||||||||||||||| || ||||||||||||||
Sbjct: 499 gagatgattggccactacctcgcagagttctccat 533
>gb|C74747.1|C74747 C74747 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E50814_1A,
mRNA sequence
Length = 423
Score = 440 bits (222), Expect = e-121
Identities = 288/310 (92%)
Strand = Plus / Plus
Query: 322 ggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcga 381
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcga 60
Query: 382 aaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatga 441
|||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 61 aaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacatga 120
Query: 442 tcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaacc 501
|||||||||| |||||||| || ||||| || ||||||||||||||||||||||||||||
Sbjct: 121 tcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagaccttcaacc 180
Query: 502 aggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttcctaca 561
|||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 181 aggttgagattaagcctgagatgattggtcactaccttgcggagttctccatctcctaca 240
Query: 562 agccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccctc 621
||||||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 241 agccggttaagcacggtaggcccggtattggtgccacccactcctctcggttcatccctc 300
Query: 622 tgaaatgagt 631
| ||||||||
Sbjct: 301 tcaaatgagt 310
>gb|CV721418.1|CV721418 YBH--04-A17.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-A17, mRNA sequence
Length = 456
Score = 432 bits (218), Expect = e-118
Identities = 331/368 (89%), Gaps = 3/368 (0%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 89 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 148
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 149 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 208
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 209 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 268
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 269 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 328
Query: 405 aagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattggg 464
||||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| ||
Sbjct: 329 aagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcgga 388
Query: 465 agcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatg 524
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatg 448
Query: 525 attggcca 532
||||||||
Sbjct: 449 attggcca 456
>gb|AU057418.1|AU057418 AU057418 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21427_1A, mRNA sequence
Length = 464
Score = 430 bits (217), Expect = e-118
Identities = 350/391 (89%), Gaps = 5/391 (1%)
Strand = Plus / Plus
Query: 168 atggcggacgtcgatgtggagccggaggtcgccgc---cggtgctcccaagaagaggacg 224
|||||||| ||||| || ||| ||||||| ||||| ||| || || ||||||||||||
Sbjct: 69 atggcggatgtcgaggtcgaggcggaggtggccgcggccggagcgccgaagaagaggacg 128
Query: 225 ttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgac 284
|||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||
Sbjct: 129 ttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccaccgac 188
Query: 285 gacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagagg 344
|||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 189 gacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaagagg 248
Query: 345 aagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgag 404
|||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||
Sbjct: 249 aagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgag 308
Query: 405 aagccagagccagtgaagacccatc-tccgcaacatgatcattgtccccgagatgattgg 463
||||||||||| |||| |||||| | || | |||||||||||||| || |||||||| ||
Sbjct: 309 aagccagagcctgtgaggacccaccttcaggaacatgatcattgtgcctgagatgatcgg 368
Query: 464 gagcattgttggtgtctacaatggcaagacc-ttcaaccaggttgagatcaagcctgaga 522
||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 369 aagcatcgtcggtgtctacaacggcaagacctttcaaccaggttgagatcaagcctgaga 428
Query: 523 tgattggccactatcttgcagagttctccat 553
||||||||||||| || ||||||||||||||
Sbjct: 429 tgattggccactacctcgcagagttctccat 459
>gb|CV724705.1|CV724705 14Salt--01-G24.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-G24, mRNA sequence
Length = 529
Score = 430 bits (217), Expect = e-118
Identities = 304/333 (91%)
Strand = Plus / Plus
Query: 221 gacgttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccac 280
|||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||||
Sbjct: 190 gacgttccgcaagtacagctaccgcggcgtggacctcgacgcgctcctcgacatgtccac 249
Query: 281 cgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaa 340
|||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||
Sbjct: 250 cgacgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggcctgaa 309
Query: 341 gaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcgg 400
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct: 310 gaggaagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctgg 369
Query: 401 cgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgat 460
|||||||||||||| |||| |||||| ||| | |||||||||||||| || ||||||||
Sbjct: 370 tgagaagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgat 429
Query: 461 tgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctga 520
|| ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 430 cggaagcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctga 489
Query: 521 gatgattggccactatcttgcagagttctccat 553
||||||||||||||| || |||| |||||||||
Sbjct: 490 gatgattggccactacctcgcagggttctccat 522
>gb|CF338268.1|CF338268 RCL1--01-C13.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--01-C13, mRNA sequence
Length = 430
Score = 422 bits (213), Expect = e-115
Identities = 296/323 (91%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 167 catggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggac 223
||||||||||||||| || ||| |||||||||||||||| || || |||||||||||
Sbjct: 108 catggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggac 167
Query: 224 gttccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccga 283
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 168 gttccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccga 227
Query: 284 cgacctcgtccagctcttcccagcgcgcgccaggagaaggttccagaggggtttgaagag 343
|||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||
Sbjct: 228 tgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccagaggggtctgaagag 287
Query: 344 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcga 403
|||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 288 gaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcga 347
Query: 404 gaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgg 463
||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 348 gaagccagagccagtgaggacccacctccgcaacatgatcattgtccctgagatgatcgg 407
Query: 464 gagcattgttggtgtctacaatg 486
||||| || |||||||||||||
Sbjct: 408 aagcatcgtcggtgtctacaatg 430
>gb|C28207.1|C28207 C28207 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C60363_1A, mRNA sequence
Length = 332
Score = 418 bits (211), Expect = e-114
Identities = 299/329 (90%), Gaps = 1/329 (0%)
Strand = Plus / Plus
Query: 270 gacatgtccaccgacgacctcgtccagctcttcccagcgcgcgccaggagaaggttccag 329
|||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 4 gacatgtccaccgatgacctcgtccagctcttccccgcgcgcgcccgcagaaggttccag 63
Query: 330 aggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggat 389
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 64 aggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaanggat 123
Query: 390 gctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtc 449
|| |||| |||||||||||||||||||| | |||||| |||||||||||||||||||||
Sbjct: 124 gcccctgctggcgagaagccagagccagtnaggacccacctccgcaacatgatcattgtc 183
Query: 450 cccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgag 509
|| |||||||| || ||||| || |||||||||| ||||| |||||||||||||||||||
Sbjct: 184 cctgagatgatcggaagcatcgtcggtgtctacagtggcangaccttcaaccaggttgag 243
Query: 510 atcaagcctgagatgattggccactatcttgcagagttctccatttcctacaagccggtc 569
|| | ||||||||||||||| ||||| ||||| ||||||||||| ||||||| ||||||
Sbjct: 244 attangcctgagatgattggtcactaccttgcggagttctccatctcctacangccggtt 303
Query: 570 aagcacggga-ggcccggtattggtgcca 597
|||||||| | || |||||||||||||||
Sbjct: 304 aagcacggtagggnccggtattggtgcca 332
>gb|AU033240.1|AU033240 AU033240 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5686_1A, mRNA sequence
Length = 427
Score = 373 bits (188), Expect = e-100
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 1 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgcccctgctggcgagaa 60
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
|||||| ||||| | |||||| |||||||||||| |||||||||| |||||||| || ||
Sbjct: 61 gccaganccagtaaggacccacctccgcaacatgntcattgtccctgagatgatcggaag 120
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
||| || |||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 121 catcgtcggtgtctacaatggcaagaccttcaaccaggttgagattaagcctganatgat 180
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccgg 586
||| ||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 181 tggtcactaccttgcggagttctccatctcctacaagccggttaagcacggtaggcccgg 240
Query: 587 tattggtgccactcactcctcgcggtttatccctctgaaatgagt 631
|||||||||||| |||||||| ||||| |||||||| ||||||||
Sbjct: 241 tattggtgccacccactcctctcggttcatccctctcaaatgagt 285
>gb|CV724706.1|CV724706 14Salt--01-G24.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-G24, mRNA sequence
Length = 493
Score = 345 bits (174), Expect = 2e-092
Identities = 258/286 (90%)
Strand = Plus / Minus
Query: 337 tgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctg 396
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 493 tgaagaggaagcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctg 434
Query: 397 tcggcgagaagccagagccagtgaagacccatctccgcaacatgatcattgtccccgaga 456
|| |||||||||||||| |||| |||||| ||| | |||||||||||||| || ||||
Sbjct: 433 ctggtgagaagccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgaga 374
Query: 457 tgattgggagcattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagc 516
|||| || ||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 373 tgatcggaagcatcgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagc 314
Query: 517 ctgagatgattggccactatcttgcagagttctccatttcctacaagccggtcaagcacg 576
||||||||||||||||||| || |||| ||||||||| || |||||||| ||||||||||
Sbjct: 313 ctgagatgattggccactacctcgcagggttctccatctcgtacaagccagtcaagcacg 254
Query: 577 ggaggcccggtattggtgccactcactcctcgcggtttatccctct 622
| ||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct: 253 gtaggcctggtattggtgctacccactcctcacggtttatccctct 208
>gb|CV730810.1|CV730810 FLO--04-I19.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-I19,
mRNA sequence
Length = 494
Score = 341 bits (172), Expect = 4e-091
Identities = 250/276 (90%)
Strand = Plus / Minus
Query: 347 gcccatggcgctcatcaagaagctgcgcaaggcgaaaaaggatgctcctgtcggcgagaa 406
|||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||
Sbjct: 494 gcccatggcgctcatcaagaagctccgcaaggcgaaaaaggatgcacctgctggtgagaa 435
Query: 407 gccagagccagtgaagacccatctccgcaacatgatcattgtccccgagatgattgggag 466
||||||||| |||| |||||| ||| | |||||||||||||| || |||||||| || ||
Sbjct: 434 gccagagcctgtgaggacccacctcaggaacatgatcattgtgcctgagatgatcggaag 375
Query: 467 cattgttggtgtctacaatggcaagaccttcaaccaggttgagatcaagcctgagatgat 526
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cattgtcggtgtctacaacggcaagaccttcaaccaggttgagatcaagcctgagatgat 315
Query: 527 tggccactatcttgcagagttctccatttcctacaagccggtcaagcacgggaggcccgg 586
||||||||| || |||||||| |||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 314 tggccactacctcgcagagttttccatttcgtacaagccagtcaagcacggtaggcctgg 255
Query: 587 tattggtgccactcactcctcgcggtttatccctct 622
||||||||| || |||||||| ||||||||||||||
Sbjct: 254 tattggtgctacccactcctcacggtttatccctct 219
>gb|CF291957.1|CF291957 14ROOT--02-J15.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-J15, mRNA sequence
Length = 451
Score = 337 bits (170), Expect = 6e-090
Identities = 236/258 (91%)
Strand = Plus / Minus
Query: 374 caaggcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccg 433
|||||||||||||||||| |||| |||||||||||||||||||||| |||||| |||||
Sbjct: 451 caaggcgaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccg 392
Query: 434 caacatgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagac 493
|||||||||||||||||| |||||||| || ||||| || ||||||||||||||||||||
Sbjct: 391 caacatgatcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagac 332
Query: 494 cttcaaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccat 553
|||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 331 cttcaaccaggttgagattaagcctgagatgattggtcactaccttgcggagttttccat 272
Query: 554 ttcctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtt 613
|||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 271 ctcctacaagccggttaagcacggtaggcccggtattggtgccacccactcctctcggtt 212
Query: 614 tatccctctgaaatgagt 631
|||||||| ||||||||
Sbjct: 211 catccctctcaaatgagt 194
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 111 caagttatatacctaaggcattttgttctgttt 79
>gb|CF337855.1|CF337855 JMT--08-H14.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--08-H14, mRNA sequence
Length = 489
Score = 337 bits (170), Expect = 6e-090
Identities = 274/306 (89%), Gaps = 2/306 (0%)
Strand = Plus / Minus
Query: 318 agaaggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaag 377
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 484 agaaggttccagaggggcctgaagaggaagcccatggcgctcatcaagaagctccgcaag 425
Query: 378 gcgaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatc-tccgcaa 436
|||||||||||||| |||| || ||||||||||||| |||| |||||| | || | ||
Sbjct: 424 gcgaaaaaggatgcacctgctggt-agaagccagagcctgtgaggacccaccctcaggaa 366
Query: 437 catgatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagacctt 496
|||||||||||| || |||||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 365 catgatcattgtgcctgagatgatcggaagcatcgtcggtgtttacaacggcaagacctt 306
Query: 497 caaccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttc 556
||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 305 caaccaggttgagatcaagcctgagatgattggccactacctcgcagagttctccatctc 246
Query: 557 ctacaagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttat 616
|||||||| ||||||||||| ||||| ||||||||||| || |||||||| ||||||||
Sbjct: 245 gtacaagccagtcaagcacggtaggcctggtattggtgctacccactcctcacggtttat 186
Query: 617 ccctct 622
||||||
Sbjct: 185 ccctct 180
>gb|AACV01015303.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015303, whole
genome shotgun sequence
Length = 21836
Score = 333 bits (168), Expect = 9e-089
Identities = 231/252 (91%)
Strand = Plus / Plus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
|||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 12235 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 12294
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| |||||||| || ||||| || ||||||||||||||||||||||||||
Sbjct: 12295 gatcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagaccttcaa 12354
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 12355 ccaggttgagattaagcctgagatgattggtcactaccttgcggagttctccatctccta 12414
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 12415 caagccggttaagcacggtaggcccggtattggtgccacccactcctctcggttcatccc 12474
Query: 620 tctgaaatgagt 631
||| ||||||||
Sbjct: 12475 tctcaaatgagt 12486
Score = 182 bits (92), Expect = 2e-043
Identities = 142/158 (89%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggacgtt 226
|||||||||||| || ||| |||||||||||||||| || || ||||||||||||||
Sbjct: 10847 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 10906
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 10907 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 10966
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggt 324
|||||||||||||||||| ||||||||| | |||||||
Sbjct: 10967 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 11004
Score = 111 bits (56), Expect = 6e-022
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11133 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 11192
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 12569 caagttatatacctaaggcattttgttctgttt 12601
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1046_F10
Length = 118472
Score = 333 bits (168), Expect = 9e-089
Identities = 231/252 (91%)
Strand = Plus / Minus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
|||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 71945 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 71886
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| |||||||| || ||||| || ||||||||||||||||||||||||||
Sbjct: 71885 gatcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagaccttcaa 71826
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 71825 ccaggttgagattaagcctgagatgattggtcactaccttgcggagttctccatctccta 71766
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 71765 caagccggttaagcacggtaggcccggtattggtgccacccactcctctcggttcatccc 71706
Query: 620 tctgaaatgagt 631
||| ||||||||
Sbjct: 71705 tctcaaatgagt 71694
Score = 182 bits (92), Expect = 2e-043
Identities = 142/158 (89%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggacgtt 226
|||||||||||| || ||| |||||||||||||||| || || ||||||||||||||
Sbjct: 73333 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 73274
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 73273 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 73214
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggt 324
|||||||||||||||||| ||||||||| | |||||||
Sbjct: 73213 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 73176
Score = 111 bits (56), Expect = 6e-022
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73047 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 72988
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 71611 caagttatatacctaaggcattttgttctgttt 71579
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 333 bits (168), Expect = 9e-089
Identities = 231/252 (91%)
Strand = Plus / Minus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
|||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 4449298 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 4449239
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| |||||||| || ||||| || ||||||||||||||||||||||||||
Sbjct: 4449238 gatcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagaccttcaa 4449179
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 4449178 ccaggttgagattaagcctgagatgattggtcactaccttgcggagttctccatctccta 4449119
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 4449118 caagccggttaagcacggtaggcccggtattggtgccacccactcctctcggttcatccc 4449059
Query: 620 tctgaaatgagt 631
||| ||||||||
Sbjct: 4449058 tctcaaatgagt 4449047
Score = 182 bits (92), Expect = 2e-043
Identities = 142/158 (89%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggacgtt 226
|||||||||||| || ||| |||||||||||||||| || || ||||||||||||||
Sbjct: 4450686 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 4450627
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 4450626 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 4450567
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggt 324
|||||||||||||||||| ||||||||| | |||||||
Sbjct: 4450566 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 4450529
Score = 111 bits (56), Expect = 6e-022
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4450400 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 4450341
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 4448964 caagttatatacctaaggcattttgttctgttt 4448932
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 333 bits (168), Expect = 9e-089
Identities = 231/252 (91%)
Strand = Plus / Minus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
|||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1566082 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 1566023
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| |||||||| || ||||| || ||||||||||||||||||||||||||
Sbjct: 1566022 gatcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagaccttcaa 1565963
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 1565962 ccaggttgagattaagcctgagatgattggtcactaccttgcggagttctccatctccta 1565903
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1565902 caagccggttaagcacggtaggcccggtattggtgccacccactcctctcggttcatccc 1565843
Query: 620 tctgaaatgagt 631
||| ||||||||
Sbjct: 1565842 tctcaaatgagt 1565831
Score = 182 bits (92), Expect = 2e-043
Identities = 142/158 (89%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggacgtt 226
|||||||||||| || ||| |||||||||||||||| || || ||||||||||||||
Sbjct: 1567470 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 1567411
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 1567410 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 1567351
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggt 324
|||||||||||||||||| ||||||||| | |||||||
Sbjct: 1567350 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 1567313
Score = 111 bits (56), Expect = 6e-022
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567184 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 1567125
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 1565748 caagttatatacctaaggcattttgttctgttt 1565716
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 333 bits (168), Expect = 9e-089
Identities = 231/252 (91%)
Strand = Plus / Minus
Query: 380 gaaaaaggatgctcctgtcggcgagaagccagagccagtgaagacccatctccgcaacat 439
|||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||
Sbjct: 4382831 gaaaaaggatgcccctgctggcgagaagccagagccagtgaggacccacctccgcaacat 4382772
Query: 440 gatcattgtccccgagatgattgggagcattgttggtgtctacaatggcaagaccttcaa 499
|||||||||||| |||||||| || ||||| || ||||||||||||||||||||||||||
Sbjct: 4382771 gatcattgtccctgagatgatcggaagcatcgtcggtgtctacaatggcaagaccttcaa 4382712
Query: 500 ccaggttgagatcaagcctgagatgattggccactatcttgcagagttctccatttccta 559
|||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 4382711 ccaggttgagattaagcctgagatgattggtcactaccttgcggagttctccatctccta 4382652
Query: 560 caagccggtcaagcacgggaggcccggtattggtgccactcactcctcgcggtttatccc 619
||||||||| |||||||| |||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 4382651 caagccggttaagcacggtaggcccggtattggtgccacccactcctctcggttcatccc 4382592
Query: 620 tctgaaatgagt 631
||| ||||||||
Sbjct: 4382591 tctcaaatgagt 4382580
Score = 182 bits (92), Expect = 2e-043
Identities = 142/158 (89%), Gaps = 3/158 (1%)
Strand = Plus / Minus
Query: 170 ggcggacgtcgatgtggagccggaggtcgccgccggtgc---tcccaagaagaggacgtt 226
|||||||||||| || ||| |||||||||||||||| || || ||||||||||||||
Sbjct: 4384219 ggcggacgtcgaagtcgagacggaggtcgccgccggcgcacagccaaagaagaggacgtt 4384160
Query: 227 ccgcaagtacagctaccgcggcgtcgacctcgatgcgctgcttgacatgtccaccgacga 286
||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct: 4384159 ccgcaagtacagctaccgcggcgtcgacctcgacgcgctcctcgacatgtccaccgatga 4384100
Query: 287 cctcgtccagctcttcccagcgcgcgccaggagaaggt 324
|||||||||||||||||| ||||||||| | |||||||
Sbjct: 4384099 cctcgtccagctcttccccgcgcgcgcccgcagaaggt 4384062
Score = 111 bits (56), Expect = 6e-022
Identities = 59/60 (98%)
Strand = Plus / Minus
Query: 321 aggttccagaggggtttgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 380
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4383933 aggttccagaggggtctgaagaggaagcccatggcgctcatcaagaagctgcgcaaggcg 4383874
Score = 42.1 bits (21), Expect = 0.48
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 704 caagttacatacccaagacattttgttctgttt 736
||||||| ||||| ||| |||||||||||||||
Sbjct: 4382497 caagttatatacctaaggcattttgttctgttt 4382465
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,141,533
Number of Sequences: 438736
Number of extensions: 1141533
Number of successful extensions: 7273
Number of sequences better than 0.5: 76
Number of HSP's better than 0.5 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7008
Number of HSP's gapped (non-prelim): 254
length of query: 845
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 824
effective length of database: 2,791,206,460
effective search space: 2299954123040
effective search space used: 2299954123040
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)