BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161254.2.1
(1192 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA... 793 0.0
dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA... 743 0.0
gb|CB651548.1|CB651548 OSJNEb16I21.f OSJNEb Oryza sativa (j... 737 0.0
gb|CB649772.1|CB649772 OSJNEb13O11.f OSJNEb Oryza sativa (j... 611 e-172
ref|XM_471515.1| Oryza sativa (japonica cultivar-group), p... 609 e-171
gb|CB676487.1|CB676487 OSJNEe12M09.f OSJNEe Oryza sativa (j... 595 e-167
gb|CB643140.1|CB643140 OSJNEb03K21.f OSJNEb Oryza sativa (j... 593 e-167
gb|CB671149.1|CB671149 OSJNEe04J07.f OSJNEe Oryza sativa (j... 593 e-167
gb|CF305908.1|CF305908 HDA1--02-B11.g1 OsHDAC1-overexpressi... 563 e-158
gb|CB669060.1|CB669060 OSJNEe01E11.f OSJNEe Oryza sativa (j... 539 e-150
gb|CB663306.1|CB663306 OSJNEd08B16.f OSJNEd Oryza sativa (j... 529 e-147
gb|CB669691.1|CB669691 OSJNEe02F24.f OSJNEe Oryza sativa (j... 523 e-146
gb|CB661901.1|CB661901 OSJNEd05F11.f OSJNEd Oryza sativa (j... 515 e-143
gb|CB670939.1|CB670939 OSJNEe04E10.f OSJNEe Oryza sativa (j... 482 e-133
gb|CF303549.1|CF303549 ABF1--02-J07.g1 ABF3-overexpressing ... 424 e-116
gb|CB674068.1|CB674068 OSJNEe08P02.f OSJNEe Oryza sativa (j... 422 e-115
gb|CB637796.1|CB637796 OSJNEa05A13.f OSJNEa Oryza sativa (j... 412 e-112
gb|CB671344.1|CB671344 OSJNEe04O03.f OSJNEe Oryza sativa (j... 412 e-112
gb|CB641392.1|CB641392 OSJNEb01A03.f OSJNEb Oryza sativa (j... 365 4e-098
gb|CF307181.1|CF307181 HDA1--05-P15.g1 OsHDAC1-overexpressi... 363 1e-097
gb|CB640184.1|CB640184 OSJNEa13K04.f OSJNEa Oryza sativa (j... 357 9e-096
gb|CB637202.1|CB637202 OSJNEa03H23.f OSJNEa Oryza sativa (j... 353 1e-094
gb|CB645437.1|CB645437 OSJNEb07B22.f OSJNEb Oryza sativa (j... 311 5e-082
gb|CB673444.1|CB673444 OSJNEe07P13.f OSJNEe Oryza sativa (j... 301 5e-079
gb|CV722807.1|CV722807 root--01-K02.g1 Rice root lambda pha... 295 3e-077
gb|CB664092.1|CB664092 OSJNEd09J24.f OSJNEd Oryza sativa (j... 291 4e-076
gb|CB640067.1|CB640067 OSJNEa13C06.f OSJNEa Oryza sativa (j... 281 4e-073
gb|CB637568.1|CB637568 OSJNEa04G24.f OSJNEa Oryza sativa (j... 270 2e-069
gb|CB637776.1|CB637776 OSJNEa04P09.f OSJNEa Oryza sativa (j... 236 2e-059
gb|CB639189.1|CB639189 OSJNEa08L04.f OSJNEa Oryza sativa (j... 236 2e-059
gb|CB678077.1|CB678077 OSJNEe15K07.f OSJNEe Oryza sativa (j... 232 4e-058
gb|CB636965.1|CB636965 OSJNEa03A01.f OSJNEa Oryza sativa (j... 228 5e-057
gb|CB639113.1|CB639113 OSJNEa08G24.f OSJNEa Oryza sativa (j... 228 5e-057
gb|CB641073.1|CB641073 OSJNEa17L09.f OSJNEa Oryza sativa (j... 216 2e-053
gb|CB641099.1|CB641099 OSJNEa17N09.f OSJNEa Oryza sativa (j... 216 2e-053
gb|CB641297.1|CB641297 OSJNEa18K10.f OSJNEa Oryza sativa (j... 200 1e-048
gb|CB637913.1|CB637913 OSJNEa05G23.f OSJNEa Oryza sativa (j... 198 5e-048
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 196 2e-047
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 196 2e-047
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 196 2e-047
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 196 2e-047
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 196 2e-047
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 196 2e-047
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 196 2e-047
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 188 5e-045
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 188 5e-045
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 188 5e-045
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 188 5e-045
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 188 5e-045
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 188 5e-045
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 188 5e-045
dbj|AG214514.1| Oryza sativa (japonica cultivar-group) DNA,... 178 5e-042
gb|CB639303.1|CB639303 OSJNEa09H24.f OSJNEa Oryza sativa (j... 172 3e-040
dbj|AK102526.1| Oryza sativa (japonica cultivar-group) cDNA... 172 3e-040
dbj|AG209167.1| Oryza sativa (japonica cultivar-group) DNA,... 168 4e-039
dbj|AK103721.1| Oryza sativa (japonica cultivar-group) cDNA... 157 2e-035
dbj|AK119404.1| Oryza sativa (japonica cultivar-group) cDNA... 157 2e-035
gb|CF324005.1|CF324005 HDN--05-F21.g1 OsHDAC1-overexpressin... 147 2e-032
dbj|AK099668.1| Oryza sativa (japonica cultivar-group) cDNA... 143 3e-031
gb|CG408882.1|CG408882 Ds576 Ds insertion lines Oryza sativ... 141 1e-030
gb|CF323929.1|CF323929 HDN--05-C10.g1 OsHDAC1-overexpressin... 137 2e-029
gb|CB637692.1|CB637692 OSJNEa04L18.f OSJNEa Oryza sativa (j... 135 6e-029
gb|AACV01009093.1| Oryza sativa (japonica cultivar-group) c... 133 2e-028
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 133 2e-028
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 133 2e-028
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 133 2e-028
emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromoso... 133 2e-028
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 133 2e-028
gb|AACV01023904.1| Oryza sativa (japonica cultivar-group) c... 117 1e-023
gb|CB676812.1|CB676812 OSJNEe13E16.f OSJNEe Oryza sativa (j... 113 2e-022
gb|AQ256065.1|AQ256065 nbxb0015G22f CUGI Rice BAC Library O... 107 1e-020
dbj|AK062739.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA... 100 3e-018
ref|XM_479599.1| Oryza sativa (japonica cultivar-group), mRNA 100 3e-018
gb|AQ870490.1|AQ870490 nbeb0039K12r CUGI Rice BAC Library (... 86 5e-014
dbj|AG023178.1| Oryza sativa (japonica cultivar-group) DNA,... 78 1e-011
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|AACV01022286.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
dbj|AP003818.2| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
gb|AACV01017045.1| Oryza sativa (japonica cultivar-group) c... 70 3e-009
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 70 3e-009
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 70 3e-009
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 70 3e-009
gb|D25136.1|D25136 RICR3282A Rice root Oryza sativa (japoni... 60 3e-006
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 58 1e-005
gb|AACV01006501.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CB650175.1|CB650175 OSJNEb14H19.f OSJNEb Oryza sativa (j... 56 5e-005
dbj|AG024487.1| Oryza sativa (japonica cultivar-group) DNA,... 54 2e-004
dbj|AG024755.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.044
>dbj|AK065240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I08, full
insert sequence
Length = 2285
Score = 793 bits (400), Expect = 0.0
Identities = 709/812 (87%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 250 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 309
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 310 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 369
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 370 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 429
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 430 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 489
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 490 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 549
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 550 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 609
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| ||||||||
Sbjct: 610 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagt 669
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| ||||||||| |||| ||| | |||||||| |||| ||||||
Sbjct: 670 tctgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattgg 729
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 730 acaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaata 789
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| ||||| || |||||||| ||| ||||||||||||| |||||||||| ||||||
Sbjct: 790 acaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagacact 849
Query: 973 tacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacga 1032
||||||||||||||||| ||||||||||||||||| ||| | ||||| || |||||||||
Sbjct: 850 tacaagggacatggttttcgcacagaacttatatctatgatgttggacttaaaaccacga 909
Query: 1033 ttcttgagatttcctggaggttgttttgtagaaggtgactggctaagaaatgcattcaga 1092
||||||||||| ||||||||||| ||||| || || || ||| |||| || ||||||||
Sbjct: 910 ttcttgagattccctggaggttgctttgtggagggggaatggttaaggaacgcattcagg 969
Query: 1093 tggagagaatcaattggtccatgggaagagaggcctggacacttcggggatgtttggcat 1152
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 970 tggagggaatctattggtccatgggaagagaggcctggacactttggggatgtttggcat 1029
Query: 1153 tactggactgatgatgggcttggatattatga 1184
||||||||||||||||| ||||||||||||||
Sbjct: 1030 tactggactgatgatggccttggatattatga 1061
>dbj|AK072576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M13, full
insert sequence
Length = 2272
Score = 743 bits (375), Expect = 0.0
Identities = 705/815 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 245 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 304
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 305 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 364
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 365 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 424
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 425 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 484
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 485 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 544
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct: 545 ggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagacctac 604
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| || |||||
Sbjct: 605 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttgacaagt 664
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| |||||||| ||| ||| | |||||||| | || ||||||
Sbjct: 665 tctgatgggtcgcaaaatctggcttcaagtaccataccggtttctggtgcgtcgaattgg 724
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 725 acaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggcttcaaata 784
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| ||||||
Sbjct: 785 acaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgcagacact 844
Query: 973 tacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacga 1032
||||||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||
Sbjct: 845 tacaagggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacga 904
Query: 1033 ttcttgagatttcctggaggttgttttgtagaaggtgactggctaagaaatgcattcaga 1092
||||||||||| ||||||||||| || || || ||||| ||| ||||||| ||||||||
Sbjct: 905 ttcttgagattccctggaggttgcttcgtggagggtgaatggttaagaaacgcattcagg 964
Query: 1093 tggagagaatcaattggtccatgggaagagaggcctggacacttcggggatgtttggcat 1152
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 965 tggagggaatctattggtccatgggaagagaggcctggacactttggggatgtttggcat 1024
Query: 1153 tactggactgatgatgggcttggatattatgagtt 1187
||||||||||||||||| |||||||||||||||||
Sbjct: 1025 tactggactgatgatggccttggatattatgagtt 1059
>gb|CB651548.1|CB651548 OSJNEb16I21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I21 5', mRNA sequence
Length = 843
Score = 737 bits (372), Expect = 0.0
Identities = 645/736 (87%)
Strand = Plus / Plus
Query: 449 tttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaaca 508
|||||||||| |||||||||||||| |||||||| |||||||| || ||||| |||||||
Sbjct: 1 tttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaaca 60
Query: 509 gaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattg 568
||||||| |||||||||||| ||||||| ||||||||||| || || |||||||| ||||
Sbjct: 61 gaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattg 120
Query: 569 gagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattg 628
| |||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | ||
Sbjct: 121 gtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactg 180
Query: 629 ttgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttata 688
||||||| ||||||||||| ||||||||| | || ||||||||||||||||| ||||||
Sbjct: 181 ttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttata 240
Query: 689 acccaggtttttggggcatgaacatagaagatgggaaggcctacaatctcgttatgtatg 748
||||||| || ||||||||||||||||||||||| ||| ||||||| | || |||||||
Sbjct: 241 acccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgtatg 300
Query: 749 ttcagtccccagaaacaaaggatctaacagtttcattaacaagctctgatgggttgcaaa 808
|| | || |||||||| ||| | |||||||| |||||||| |||||||||| |||||
Sbjct: 301 ttaaatcaccagaaactgtggagttgacagtttccttaacaagttctgatgggtcgcaaa 360
Query: 809 acttggcttcagctacaataacagtttctggcacatcaaattggacaaaagtggagcaga 868
| ||||||||| |||| ||| | |||||||| |||| |||||||||||| |||||||||
Sbjct: 361 atttggcttcaactaccataccggtttctggtgcatcgaattggacaaaactggagcaga 420
Query: 869 agctggttgctaaaggaaccaatagaacatcaaggcttcaaataacaacgaacaaaaaag 928
|| |||||||| ||||||| |||||||| |||||||||||||||||||| ||||| || |
Sbjct: 421 agttggttgctcaaggaacaaatagaacctcaaggcttcaaataacaactaacaagaagg 480
Query: 929 gagttgtttggcttgatcaagtatcactcatgcctgaagacacatacaagggacatggtt 988
||||||| ||| ||||||||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 481 gagttgtatggtttgatcaagtatcgctcatgcctgcagacacttacaagggacatggtt 540
Query: 989 tccgcacagaacttatatccatgcttttggatttgaaaccacgattcttgagatttcctg 1048
| ||||||||||||||||| ||| | ||||| || |||||||||||||||||||| ||||
Sbjct: 541 ttcgcacagaacttatatctatgatgttggacttaaaaccacgattcttgagattccctg 600
Query: 1049 gaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattg 1108
||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| ||||
Sbjct: 601 gaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctattg 660
Query: 1109 gtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatg 1168
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 661 gtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgatg 720
Query: 1169 ggcttggatattatga 1184
| ||||||||||||||
Sbjct: 721 gccttggatattatga 736
>gb|CB649772.1|CB649772 OSJNEb13O11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13O11 5', mRNA sequence
Length = 848
Score = 611 bits (308), Expect = e-172
Identities = 542/620 (87%)
Strand = Plus / Plus
Query: 565 attggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaac 624
||||| |||||||| ||| | ||||||||||||||||| || |||||||| ||||| ||
Sbjct: 4 attggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaat 63
Query: 625 attgttgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtt 684
| ||||||||| ||||||||||| ||||||||| | || ||||||||||||||||| ||
Sbjct: 64 actgttgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatt 123
Query: 685 tataacccaggtttttggggcatgaacatagaagatgggaaggcctacaatctcgttatg 744
||||||||||| || ||||||||||||||||||||||| ||| ||||||| | || |||
Sbjct: 124 tataacccagggttctggggcatgaacatagaagatggaaagatctacaatttagtgatg 183
Query: 745 tatgttcagtccccagaaacaaaggatctaacagtttcattaacaagctctgatgggttg 804
|||||| | || |||||||| ||| | |||||||| |||||||| |||||||||| |
Sbjct: 184 tatgttaaatcaccagaaactgtggagttgacagtttccttaacaagttctgatgggtcg 243
Query: 805 caaaacttggcttcagctacaataacagtttctggcacatcaaattggacaaaagtggag 864
||||| ||||||||| |||| ||| | |||||||| |||| |||||||||||| |||||
Sbjct: 244 caaaatttggcttcaactaccataccggtttctggtgcatcgaattggacaaaactggag 303
Query: 865 cagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaataacaacgaacaaa 924
|||||| |||||||| ||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 304 cagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaataacaactaacaag 363
Query: 925 aaaggagttgtttggcttgatcaagtatcactcatgcctgaagacacatacaagggacat 984
|| |||||||| ||| ||||||||||||| |||||||||| |||||| ||||||||||||
Sbjct: 364 aagggagttgtatggtttgatcaagtatcgctcatgcctgcagacacttacaagggacat 423
Query: 985 ggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattcttgagattt 1044
||||| ||||||||||||||||| ||| | ||||| || ||||||||||||||||||||
Sbjct: 424 ggttttcgcacagaacttatatctatgatgttggacttaaaaccacgattcttgagattc 483
Query: 1045 cctggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatca 1104
||||||||||| ||||| || || || ||| |||| || |||||||| ||||| |||||
Sbjct: 484 cctggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatct 543
Query: 1105 attggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgat 1164
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 544 attggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgat 603
Query: 1165 gatgggcttggatattatga 1184
||||| ||||||||||||||
Sbjct: 604 gatggccttggatattatga 623
>ref|XM_471515.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1965
Score = 609 bits (307), Expect = e-171
Identities = 685/811 (84%)
Strand = Plus / Plus
Query: 382 gcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaaacactgttt 441
|||| |||||||||||||||||| || |||| ||| || ||||||||||| ||||| |||
Sbjct: 103 gcagtcctcaaggttgatgcctcaccgcagcatgctcgaaagatccctgagacactcttt 162
Query: 442 gggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtc 501
||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 163 gggatatttttcgaggagatcaaccatgctggagcaggtggaatatgggcagagcttgtc 222
Query: 502 agtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtcc 561
|| |||||||||||||||||||||||| || |||||||||| | ||| ||||| ||||||
Sbjct: 223 agcaacagaggtttcgaagctggaggccctaatactccatcgagcattgacccttggtcc 282
Query: 562 atcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcga 621
|| |||||| |||| || | | | ||||| |||||||| |||||||||||||||||
Sbjct: 283 ataattggaaatgaatctgtcatatcagtggcaactgatcgatcatcatgtttcagtcga 342
Query: 622 aacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggt 681
|| || ||||||||||||||||||| ||||||| ||| || | |||||||||||||||
Sbjct: 343 aatatcattgctctgaggatggaggttctctgtggtgactgccaagctggtggtgttggc 402
Query: 682 gtttataacccaggtttttggggcatgaacatagaagatgggaaggcctacaatctcgtt 741
|||| || ||||| || ||||||||||||||||| ||||| ||| ||||| ||| ||
Sbjct: 403 atttacaatccaggattctggggcatgaacatagaggatggaaagaactacagtcttgtc 462
Query: 742 atgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagctctgatggg 801
||||||| | | || ||||| | || ||||||||||| |||||||||||||||||
Sbjct: 463 atgtatgctaaatcattagaaaatacagagttaacagtttcactaacaagctctgatggg 522
Query: 802 ttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattggacaaaagtg 861
|||||||| || |||| ||||| ||| |||| |||| |||||||||||||||||| |
Sbjct: 523 ttgcaaaatctgtcttctgctaccatacaagttgctggtacatcaaattggacaaaactt 582
Query: 862 gagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaataacaacgaac 921
||||||||| |||||||||||||||| || ||||| |||||||||||||||||||| |||
Sbjct: 583 gagcagaagttggttgctaaaggaacaaacagaacctcaaggcttcaaataacaactaac 642
Query: 922 aaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacacatacaaggga 981
|| ||||| || | ||| | |||||| |||||||||||||| |||||| || |||||
Sbjct: 643 aagaaaggtgtcatatggttggatcaaatatcactcatgccttcagacacgtataagggt 702
Query: 982 catggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattcttgaga 1041
||||||||||| | ||||||| |||| |||||||||||||| ||||||| |||| ||||
Sbjct: 703 catggtttccggaaagaacttgtatcaatgcttttggatttaaaaccacaattcatgagg 762
Query: 1042 tttcctggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaa 1101
||||||||||| || ||||| ||||| | ||| |||||||||||||||| ||| | ||
Sbjct: 763 tttcctggaggctgctttgttgaaggccagtggttaagaaatgcattcaggtggcgtgag 822
Query: 1102 tcaattggtccatgggaagagaggcctggacacttcggggatgtttggcattactggact 1161
|| ||||||| ||||| ||||||||||||||||| || ||||| ||| ||| ||||||
Sbjct: 823 tctgttggtccgtgggaggagaggcctggacactttggtgatgtctggggttattggact 882
Query: 1162 gatgatgggcttggatattatgagttccttc 1192
|||||||| ||||||||||||||||| ||||
Sbjct: 883 gatgatggccttggatattatgagtttcttc 913
>gb|CB676487.1|CB676487 OSJNEe12M09.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12M09 5', mRNA sequence
Length = 851
Score = 595 bits (300), Expect = e-167
Identities = 551/635 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 206 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 265
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 266 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 325
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 326 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 385
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 386 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 445
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 446 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 505
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 506 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 565
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| ||||||||
Sbjct: 566 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagt 625
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| ||||||||| |||| ||| | |||||||| |||| ||||||
Sbjct: 626 tctgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattgg 685
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 686 acaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaata 745
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| ||||| || |||||||| ||| ||||||||||||| |||||||||| ||||||
Sbjct: 746 acaactaacaagaanggagttgtatggtttgatcaagtatcgctcatgcctgcagacact 805
Query: 973 tacaagggacatggtttccgcacagaacttatatc 1007
||||||||||||||||| |||||||||||||||||
Sbjct: 806 tacaagggacatggttttcgcacagaacttatatc 840
>gb|CB643140.1|CB643140 OSJNEb03K21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03K21 5', mRNA sequence
Length = 839
Score = 593 bits (299), Expect = e-167
Identities = 551/635 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 198 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 257
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 258 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 317
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 318 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 377
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 378 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 437
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 438 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 497
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 498 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 557
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| ||||||||
Sbjct: 558 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagt 617
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| ||||||||| |||| ||| | |||||||| |||| ||||||
Sbjct: 618 tctgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattgg 677
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 678 acaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaata 737
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| ||||| || |||||||| ||| ||||||||||||| |||||||||| ||||||
Sbjct: 738 acaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagacact 797
Query: 973 tacaagggacatggtttccgcacagaacttatatc 1007
||||||||||||||||| |||||||||||||||||
Sbjct: 798 tacaagggacatggttttcgcacagaacttatatc 832
>gb|CB671149.1|CB671149 OSJNEe04J07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04J07 5', mRNA sequence
Length = 814
Score = 593 bits (299), Expect = e-167
Identities = 551/635 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 161 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 220
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 221 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 280
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 281 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 340
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 341 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 400
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 401 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 460
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 461 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 520
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| ||||||||
Sbjct: 521 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagt 580
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| ||||||||| |||| ||| | |||||||| |||| ||||||
Sbjct: 581 tctgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattgg 640
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 641 acaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaata 700
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| ||||| || |||||||| ||| ||||||||||||| |||||||||| ||||||
Sbjct: 701 acaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagacact 760
Query: 973 tacaagggacatggtttccgcacagaacttatatc 1007
||||||||||||||||| |||||||||||||||||
Sbjct: 761 tacaagggacatggttttcgcacagaacttatatc 795
>gb|CF305908.1|CF305908 HDA1--02-B11.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--02-B11, mRNA sequence
Length = 680
Score = 563 bits (284), Expect = e-158
Identities = 564/658 (85%)
Strand = Plus / Plus
Query: 530 ctcatactccatcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttg 589
||||||| ||||||||||| || || |||||||| |||||||||||||| ||| | ||||
Sbjct: 9 ctcataccccatcaaacattgatccatggtccataattggagatgactcttccatatttg 68
Query: 590 tggcgactgatcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcc 649
||||||||||||| || |||||||||||||| || | ||||||||| ||||||||||| |
Sbjct: 69 tggcgactgatcgaacgtcatgtttcagtcggaatactgttgctctaaggatggaggttc 128
Query: 650 tctgtgatgagtgtccagctggtggtgttggtgtttataacccaggtttttggggcatga 709
||||||| ||||| ||||||||||||| ||||||||||||| || ||| | |
Sbjct: 129 tctgtgacatnngtccatctggtggtgttggcatttataacccaggattctggtttttta 188
Query: 710 acatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaagg 769
||||||||||||| ||| |||||||| | || ||||||||| | || |||||||| ||
Sbjct: 189 acatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgtgg 248
Query: 770 atctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctacaataa 829
| | |||||||| || ||||| |||||||||| |||||| |||||||| ||| |||
Sbjct: 249 agttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttcaagtaccatac 308
Query: 830 cagtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaacca 889
| |||||||| | || |||||||||||| ||||||||||| |||||||||||||||| |
Sbjct: 309 cggtttctggtgcgtcgaattggacaaaactggagcagaagttggttgctaaaggaacaa 368
Query: 890 atagaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaag 949
||||||| |||||||||||||||||||| | ||| || |||||||| ||| |||||||||
Sbjct: 369 atagaacctcaaggcttcaaataacaactaccaagaagggagttgtatggtttgatcaag 428
Query: 950 tatcactcatgcctgaagacacatacaagggacatggtttccgcacagaacttatatcca 1009
| || |||||| ||| |||||| ||||||||||||||||| ||||||||||| ||||| |
Sbjct: 429 tctctctcatgtctgcagacacttacaagggacatggttttcgcacagaactaatatcta 488
Query: 1010 tgcttttggatttgaaaccacgattcttgagatttcctggaggttgttttgtagaaggtg 1069
|| | ||||| || |||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 489 tgatgttggacttaaaaccacgattcttgagattccctggaggttgcttcgtggagggtg 548
Query: 1070 actggctaagaaatgcattcagatggagagaatcaattggtccatgggaagagaggcctg 1129
| ||| ||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 549 aatggttaagaaacgcattcaggtggagggaatctattggtccatgggaagagaggcctg 608
Query: 1130 gacacttcggggatgtttggcattactggactgatgatgggcttggatattatgagtt 1187
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 609 gacactttggggatgtttggcattactggactgatgatggccttggatattatgagtt 666
>gb|CB669060.1|CB669060 OSJNEe01E11.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E11 5', mRNA sequence
Length = 799
Score = 539 bits (272), Expect = e-150
Identities = 470/536 (87%)
Strand = Plus / Plus
Query: 649 ctctgtgatgagtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
||||||||| | || ||||||||||||||||| ||||||||||||| || |||||||||
Sbjct: 18 ctctgtgataattgcccagctggtggtgttggcatttataacccagggttctggggcatg 77
Query: 709 aacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaag 768
|||||||||||||| ||| ||||||| | || ||||||||| | || |||||||| |
Sbjct: 78 aacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgtg 137
Query: 769 gatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctacaata 828
|| | |||||||| |||||||| |||||||||| |||||| ||||||||| |||| |||
Sbjct: 138 gagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactaccata 197
Query: 829 acagtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaacc 888
| |||||||| |||| |||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 198 ccggtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaaca 257
Query: 889 aatagaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaa 948
|||||||| |||||||||||||||||||| ||||| || |||||||| ||| ||||||||
Sbjct: 258 aatagaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaa 317
Query: 949 gtatcactcatgcctgaagacacatacaagggacatggtttccgcacagaacttatatcc 1008
||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 318 gtatcgctcatgcctgcagacacttacaagggacatggttttcgcacagaacttatatct 377
Query: 1009 atgcttttggatttgaaaccacgattcttgagatttcctggaggttgttttgtagaaggt 1068
||| | ||||| || |||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct: 378 atgatgttggacttaaaaccacgattcttgagattccctggaggttgctttgtggagggg 437
Query: 1069 gactggctaagaaatgcattcagatggagagaatcaattggtccatgggaagagaggcct 1128
|| ||| |||| || |||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 438 gaatggttaaggaacgcattcaggtggagggaatctattggtccatgggaagagaggcct 497
Query: 1129 ggacacttcggggatgtttggcattactggactgatgatgggcttggatattatga 1184
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 498 ggacactttggggatgtttggcattactggactgatgatggccttggatattatga 553
>gb|CB663306.1|CB663306 OSJNEd08B16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd08B16 5', mRNA sequence
Length = 736
Score = 529 bits (267), Expect = e-147
Identities = 543/635 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 96 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 155
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 156 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 215
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 216 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 275
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 276 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 335
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 336 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 395
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct: 396 ggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagacctac 455
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| || |||||
Sbjct: 456 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttgacaagt 515
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| |||||||| ||| ||| | |||||||| | || ||||||
Sbjct: 516 tctgatgggtcgcaaaatctggcttcaagtaccataccggtttctggtgcgtcgaattgg 575
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 576 acaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggcttcaaata 635
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| ||||||
Sbjct: 636 acaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgcagacact 695
Query: 973 tacaagggacatggtttccgcacagaacttatatc 1007
||||||||||||||||| ||||||||||| |||||
Sbjct: 696 tacaagggacatggttttcgcacagaactaatatc 730
>gb|CB669691.1|CB669691 OSJNEe02F24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02F24 5', mRNA sequence
Length = 837
Score = 523 bits (264), Expect = e-146
Identities = 510/592 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 245 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 304
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 305 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 364
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 365 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 424
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 425 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 484
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| | ||||||||| ||||||||| | || |||||||||
Sbjct: 485 tttagtcggaatactgttgctctaaagatggaggttctctgtgataattgcccagctggt 544
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 545 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 604
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| ||||||||
Sbjct: 605 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagt 664
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| ||||||||| |||| ||| | |||||||| |||| ||||||
Sbjct: 665 tctgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattgg 724
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 725 acaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggcttcaaata 784
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctg 964
||||| ||||| || |||||||| ||| ||||||||||||| ||||||||||
Sbjct: 785 acaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctg 836
>gb|CB661901.1|CB661901 OSJNEd05F11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05F11 5', mRNA sequence
Length = 871
Score = 515 bits (260), Expect = e-143
Identities = 541/635 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 225 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 284
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 285 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 344
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| | |||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 345 gaacttgttactaacagaggttttgaagctggaggccctcataccccatcaaacattgat 404
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 405 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 464
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 465 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 524
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct: 525 ggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagacctac 584
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| || |||||
Sbjct: 585 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttgacaagt 644
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| |||||||| ||| ||| | |||||||| | || ||||||
Sbjct: 645 tctgatgggtcgcaaaatctggcttcaagtaccataccggtttctggtgcgtcgaattgg 704
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 705 acaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggcttcaaata 764
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacaca 972
||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| ||||||
Sbjct: 765 acaactaccaagaanggagttgtatggtttgatcaagtctctctcatgtctgcagacact 824
Query: 973 tacaagggacatggtttccgcacagaacttatatc 1007
||||||||||||| ||| ||||||||||| |||||
Sbjct: 825 tacaagggacatgtttttcgcacagaactaatatc 859
>gb|CB670939.1|CB670939 OSJNEe04E10.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04E10 5', mRNA sequence
Length = 832
Score = 482 bits (243), Expect = e-133
Identities = 510/599 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 225 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 284
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 285 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 344
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 345 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 404
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 405 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 464
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 465 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 524
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct: 525 ggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagacctac 584
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| || |||||
Sbjct: 585 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttgacaagt 644
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| |||||||| ||| ||| | |||||||| | || ||||||
Sbjct: 645 tctgatgggtcgcaaaatctggcttcaagtaccataccggtttctggtgcgtcgaattgg 704
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaata 912
|||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 705 acaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggcttcaaata 764
Query: 913 acaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacac 971
||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| ||||||
Sbjct: 765 acaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgcagacac 823
>gb|CF303549.1|CF303549 ABF1--02-J07.g1 ABF3-overexpressing transgenic rice lambda phage cDNA
library (ABF1) Oryza sativa (japonica cultivar-group)
cDNA clone ABF1--02-J07, mRNA sequence
Length = 493
Score = 424 bits (214), Expect = e-116
Identities = 403/466 (86%)
Strand = Plus / Plus
Query: 722 ggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaaggatctaacagttt 781
||||| |||||||| | || ||||||||| | || |||||||| ||| | |||||||
Sbjct: 7 ggaagacctacaatttagtgatgtatgttaaatcaccagaaactgtggagttgacagttt 66
Query: 782 cattaacaagctctgatgggttgcaaaacttggcttcagctacaataacagtttctggca 841
| || ||||| |||||||||| |||||| |||||||| ||| ||| | ||||||||
Sbjct: 67 ccttgacaagttctgatgggtcgcaaaatctggcttcaagtaccataccggtttctggtg 126
Query: 842 catcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaa 901
| || |||||||||||| ||||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 127 cgtcgaattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaa 186
Query: 902 ggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgc 961
|||||||||||||||| | ||| || |||||||| ||| |||||||||| || ||||||
Sbjct: 187 ggcttcaaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgt 246
Query: 962 ctgaagacacatacaagggacatggtttccgcacagaacttatatccatgcttttggatt 1021
||| |||||| ||||||||||||||||| ||||||||||| ||||| ||| | ||||| |
Sbjct: 247 ctgcagacacttacaagggacatggttttcgcacagaactaatatctatgatgttggact 306
Query: 1022 tgaaaccacgattcttgagatttcctggaggttgttttgtagaaggtgactggctaagaa 1081
| |||||||||||||||||||| ||||||||||| || || || ||||| ||| ||||||
Sbjct: 307 taaaaccacgattcttgagattccctggaggttgcttcgtggagggtgaatggttaagaa 366
Query: 1082 atgcattcagatggagagaatcaattggtccatgggaagagaggcctggacacttcgggg 1141
| |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 367 acgcattcaggtggagggaatctattggtccatgggaagagaggcctggacactttgggg 426
Query: 1142 atgtttggcattactggactgatgatgggcttggatattatgagtt 1187
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 427 atgtttggcattactggactgatgatggccttggatattatgagtt 472
>gb|CB674068.1|CB674068 OSJNEe08P02.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08P02 5', mRNA sequence
Length = 752
Score = 422 bits (213), Expect = e-115
Identities = 452/532 (84%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 221 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 280
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 281 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 340
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 341 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 400
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 401 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 460
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 461 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 520
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct: 521 ggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagacctac 580
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| || |||||
Sbjct: 581 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttgacaagt 640
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattgg 852
|||||||||| |||||| |||||||| ||| ||| | |||||||| | || ||||||
Sbjct: 641 tctgatgggtcgcaaaatctggcttcaagtaccataccggtttctggtgcgtcgaattgg 700
Query: 853 acaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggc 904
|||||| ||||||||||| ||||||||| |||||| |||||||| |||||||
Sbjct: 701 acaaaactggagcagaagttggttgctanaggaacaaatagaacctcaaggc 752
>gb|CB637796.1|CB637796 OSJNEa05A13.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa05A13 5', mRNA sequence
Length = 574
Score = 412 bits (208), Expect = e-112
Identities = 476/564 (84%), Gaps = 1/564 (0%)
Strand = Plus / Plus
Query: 556 tggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttc 615
|||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||||
Sbjct: 11 tggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgtttt 70
Query: 616 agtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggtggt 675
|||| || | ||||||||| | ||||||||| ||||||||| | || ||||||||||||
Sbjct: 71 agtctgaatactgttgctctaacgatggaggttctctgtgataattgcccagctggtggt 130
Query: 676 gttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctacaat 735
||||| ||||||||||| | || |||||||||||||||||| |||| ||| |||||||
Sbjct: 131 gttggcatttataacccatggttctggggcatgaacatagaacatggaaagatctacaat 190
Query: 736 ctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagct-c 794
| || ||||||||| | || |||||||| ||| | |||||||| |||||||| | |
Sbjct: 191 ttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttaacaagtttc 250
Query: 795 tgatgggttgcaaaacttggcttcagctacaataacagtttctggcacatcaaattggac 854
|||||||| |||||| ||||||||| |||| ||| | |||||||| |||| ||||||||
Sbjct: 251 tgatgggtcgcaaaatttggcttcaactaccataccggtttctggtgcatcgaattggac 310
Query: 855 aaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaataac 914
|||| |||||||||| |||||||| ||||||| |||||||| || | ||||||||| ||
Sbjct: 311 aaaactggagcagaacttggttgctcaaggaacaaatagaacctccatgcttcaaatgac 370
Query: 915 aacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaagacacata 974
||| ||||| || |||||||| ||| ||||||||||||| |||||||||| |||||| ||
Sbjct: 371 aactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgcagacactta 430
Query: 975 caagggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgatt 1034
||||||||||||||| ||||||||||||||||| ||| | ||||| || |||||||||||
Sbjct: 431 caagggacatggttttcgcacagaacttatatctatgatgttggacttaaaaccacgatt 490
Query: 1035 cttgagatttcctggaggttgttttgtagaaggtgactggctaagaaatgcattcagatg 1094
||||||||| ||||||||||| ||||| || || || ||| |||| || |||| || ||
Sbjct: 491 cttgagattccctggaggttgctttgtggagggggaatggttaaggaacgcatccatgtg 550
Query: 1095 gagagaatcaattggtccatggga 1118
||| ||||| ||||||||||||||
Sbjct: 551 gagggaatctattggtccatggga 574
>gb|CB671344.1|CB671344 OSJNEe04O03.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04O03 5', mRNA sequence
Length = 699
Score = 412 bits (208), Expect = e-112
Identities = 467/552 (84%), Gaps = 1/552 (0%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 140 acccagactgcggacctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 199
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 200 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 259
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| | ||||| |||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 260 gaacttgttaataacataggttttgaagctggaggccctcataccccatcaaacattgat 319
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 320 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 379
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || ||| ||||
Sbjct: 380 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccaactgga 439
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 440 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 499
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || ||| |||| ||| | |||||||| ||||||||
Sbjct: 500 aatttagtgatgtatgttaaatcaccacaaactgtggagttgacagtttccttaacaagg 559
Query: 793 tctgatgggttgcaaaacttggcttcagctacaataacagtt-tctggcacatcaaattg 851
|||||||||| |||||| ||||||||| |||| ||| | ||| ||||| |||| |||||
Sbjct: 560 tctgatgggtcgcaaaatttggcttcaactaccataccggttatctggtgcatcgaattg 619
Query: 852 gacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggcttcaaat 911
||||||| ||||||||||| |||||||| ||||||| |||||||| |||| ||||| ||
Sbjct: 620 gacaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaatgcttctgat 679
Query: 912 aacaacgaacaa 923
|||||| |||||
Sbjct: 680 aacaactaacaa 691
>gb|CB641392.1|CB641392 OSJNEb01A03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01A03 5', mRNA sequence
Length = 864
Score = 365 bits (184), Expect = 4e-098
Identities = 283/316 (89%)
Strand = Plus / Plus
Query: 872 tggttgctaaaggaaccaatagaacatcaaggcttcaaataacaacgaacaaaaaaggag 931
|||||||||||||||| |||||||| |||||||||||||||||||| | ||| || ||||
Sbjct: 179 tggttgctaaaggaacaaatagaacctcaaggcttcaaataacaactaccaagaagggag 238
Query: 932 ttgtttggcttgatcaagtatcactcatgcctgaagacacatacaagggacatggtttcc 991
|||| ||| |||||||||| || |||||| ||| |||||| ||||||||||||||||| |
Sbjct: 239 ttgtatggtttgatcaagtctctctcatgtctgcagacacttacaagggacatggttttc 298
Query: 992 gcacagaacttatatccatgcttttggatttgaaaccacgattcttgagatttcctggag 1051
|||||||||| ||||| ||| | ||||| || |||||||||||||||||||| |||||||
Sbjct: 299 gcacagaactaatatctatgatgttggacttaaaaccacgattcttgagattccctggag 358
Query: 1052 gttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtc 1111
|||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||||||
Sbjct: 359 gttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctattggtc 418
Query: 1112 catgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggc 1171
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 419 catgggaagagaggcctggacactttggggatgtttggcattactggactgatgatggcc 478
Query: 1172 ttggatattatgagtt 1187
||||||||||||||||
Sbjct: 479 ttggatattatgagtt 494
Score = 119 bits (60), Expect = 4e-024
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 664 ccagctggtggtgttggtgtttataacccaggtttttggggcatgaacatagaagatggg 723
||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||
Sbjct: 8 ccagctggtggtgttggcatttataacccaggattctggggcatgaacatagaagatgga 67
Query: 724 aaggcctacaatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttca 783
||| |||||||| | || ||||||||| | || |||||||| ||| | ||||||||
Sbjct: 68 aagacctacaatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttcc 127
Query: 784 ttaacaagctctgatgggttgcaaaacttggcttca 819
|| ||||| |||||||||| |||||| ||||||||
Sbjct: 128 ttgacaagttctgatgggtcgcaaaatctggcttca 163
>gb|CF307181.1|CF307181 HDA1--05-P15.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--05-P15, mRNA sequence
Length = 669
Score = 363 bits (183), Expect = 1e-097
Identities = 381/447 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 188 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 247
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 248 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 307
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 308 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 367
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 368 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 427
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 428 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 487
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct: 488 ggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagacctac 547
Query: 733 aatctcgttatgtatgttcagtccccagaaacaaaggatctaacagtttcattaacaagc 792
||| | || ||||||||| | || |||||||| ||| | |||||||| || |||||
Sbjct: 548 aatttagtgatgtatgttaaatcaccagaaactgtggagttgacagtttccttgacaagt 607
Query: 793 tctgatgggttgcaaaacttggcttca 819
|||||||||| |||||| ||||||||
Sbjct: 608 tctgatgggtcgcaaaatctggcttca 634
>gb|CB640184.1|CB640184 OSJNEa13K04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13K04 5', mRNA sequence
Length = 616
Score = 357 bits (180), Expect = 9e-096
Identities = 339/392 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 208 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 267
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 268 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 327
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 328 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 387
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 388 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 447
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 448 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 507
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 508 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 567
Query: 733 aatctcgttatgtatgttcagtccccagaaac 764
||| | || ||||||||| | || ||||||||
Sbjct: 568 aatttagtgatgtatgttaaatcaccagaaac 599
>gb|CB637202.1|CB637202 OSJNEa03H23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03H23 5', mRNA sequence
Length = 592
Score = 353 bits (178), Expect = 1e-094
Identities = 328/378 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 208 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 267
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 268 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 327
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 328 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 387
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 388 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 447
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| ||||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 448 tttagtcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 507
Query: 673 ggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggcctac 732
|||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 508 ggtgttggcatttataacccagggttctggggcatgaacatagaagatggaaagatctac 567
Query: 733 aatctcgttatgtatgtt 750
||| | || |||||||||
Sbjct: 568 aatttagtgatgtatgtt 585
>gb|CB645437.1|CB645437 OSJNEb07B22.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07B22 5', mRNA sequence
Length = 577
Score = 311 bits (157), Expect = 5e-082
Identities = 335/393 (85%), Gaps = 1/393 (0%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgcca-cagcttgcccggaagatccctga 431
|||||||| || | ||||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 123 acccagactgcggtcctcaaggttgatgcctcgactgcaacatgctcgacagatccccga 182
Query: 432 aacactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggc 491
|| || ||||| |||||||||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 183 cacgctatttggaatattttttgaggaaatcaaccatgcaagagctggtggaatatgggc 242
Query: 492 agagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcga 551
|| | || |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 243 tgaagtggttagtaacagaggttttgaagctggaggccctcataccccatcaaacattga 302
Query: 552 cccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatg 611
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || |||||
Sbjct: 303 tccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatg 362
Query: 612 tttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctgg 671
||||||||| || | ||||||||| ||||||||||| |||||||| | || ||||||||
Sbjct: 363 tttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctgg 422
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaacatagaagatgggaaggccta 731
||||||||| ||||||||||||| || ||||||||||||||||||||||| ||| ||||
Sbjct: 423 tggtgttggcatttataacccaggattctggggcatgaacatagaagatggaaagaccta 482
Query: 732 caatctcgttatgtatgttcagtccccagaaac 764
| || | || ||||||||| | || ||||||||
Sbjct: 483 ctatttagtgatgtatgttaaatcaccagaaac 515
>gb|CB673444.1|CB673444 OSJNEe07P13.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07P13 5', mRNA sequence
Length = 683
Score = 301 bits (152), Expect = 5e-079
Identities = 290/336 (86%)
Strand = Plus / Plus
Query: 387 cctcaaggttgatgcctcgccacagcttgcccggaagatccctgaaacactgtttgggat 446
|||||||| ||||||||| || || ||||| || |||||||||| ||||| ||||| ||
Sbjct: 300 cctcaaggatgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 359
Query: 447 attttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaa 506
|||||||||||| |||||||||||||| |||||||| |||||||| || ||||| |||||
Sbjct: 360 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 419
Query: 507 cagaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcat 566
|||||| || |||||||||||| ||||||| ||||||||||| || || |||||||| ||
Sbjct: 420 cagaggctttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 479
Query: 567 tggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacat 626
||| |||||||| ||| | ||||||||||||||||| || |||||||| || || || |
Sbjct: 480 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagacggaatac 539
Query: 627 tgttgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgttta 686
||||||||| ||||||||||| ||||||||| | || ||||||||||| ||||| ||||
Sbjct: 540 tgttgctctaaggatggaggttctctgtgataattgcccagctggtggagttggcattta 599
Query: 687 taacccaggtttttggggcatgaacatagaagatgg 722
||||||||| || |||||||||||||||||| ||||
Sbjct: 600 taacccagggttctggggcatgaacatagaacatgg 635
>gb|CV722807.1|CV722807 root--01-K02.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone root--01-K02,
mRNA sequence
Length = 389
Score = 295 bits (149), Expect = 3e-077
Identities = 255/289 (88%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 900 aaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcat 959
|||||||||||||||||| | ||| || |||||||| ||| |||||||||| || |||||
Sbjct: 9 aaggcttcaaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcat 68
Query: 960 gcctgaagacacatacaagggacatggtttccgcacagaacttatatccatgcttttgga 1019
| ||| |||||| ||||||||||||||||| ||||||||||| ||||| ||| | |||||
Sbjct: 69 gtctgcagacacttacaagggacatggttttcgcacagaactaatatctatgatgttgga 128
Query: 1020 tttgaaa-ccacgattcttgagatttcctggaggttgttttgtagaaggtgactggctaa 1078
|| | ||||||||||||||||| ||||||||||| || || || ||||| ||| |||
Sbjct: 129 cttatattccacgattcttgagattccctggaggttgcttcgtggagggtgaatggttaa 188
Query: 1079 gaaatgcattcagatggagagaatcaattggtccatgggaagagaggcctggacacttcg 1138
|||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |
Sbjct: 189 gaaacgcattcaggtggagggaatctattggtccatgggaagagaggcctggacactttg 248
Query: 1139 gggatgtttggcattactggactgatgatgggcttggatattatgagtt 1187
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 249 gggatgtttggcattactggactgatgatggccttggatattatgagtt 297
>gb|CB664092.1|CB664092 OSJNEd09J24.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd09J24 5', mRNA sequence
Length = 774
Score = 291 bits (147), Expect = 4e-076
Identities = 222/247 (89%)
Strand = Plus / Plus
Query: 941 ttgatcaagtatcactcatgcctgaagacacatacaagggacatggtttccgcacagaac 1000
|||||||||| || |||||| ||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 3 ttgatcaagtctctctcatgtctgcagacacttacaagggacatggttttcgcacagaac 62
Query: 1001 ttatatccatgcttttggatttgaaaccacgattcttgagatttcctggaggttgttttg 1060
| ||||| ||| | ||||| || |||||||||||||||||||| ||||||||||| || |
Sbjct: 63 taatatctatgatgttggacttaaaaccacgattcttgagattccctggaggttgcttcg 122
Query: 1061 tagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgggaag 1120
| || ||||| ||| ||||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct: 123 tggagggtgaatggttaagaaacgcattcaggtggagggaatctattggtccatgggaag 182
Query: 1121 agaggcctggacacttcggggatgtttggcattactggactgatgatgggcttggatatt 1180
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 183 agaggcctggacactttggggatgtttggcattactggactgatgatggccttggatatt 242
Query: 1181 atgagtt 1187
|||||||
Sbjct: 243 atgagtt 249
>gb|CB640067.1|CB640067 OSJNEa13C06.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13C06 5', mRNA sequence
Length = 601
Score = 281 bits (142), Expect = 4e-073
Identities = 274/318 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 284 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 343
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 344 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 403
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 404 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 463
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 464 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 523
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|||||||| || | ||||||||| ||||||||||| |||||||| | || |||||||||
Sbjct: 524 ttcagtcggaatactgttgctctaaggatggaggttctctgtgacaattgcccagctggt 583
Query: 673 ggtgttggtgtttataac 690
|||||||| ||||||||
Sbjct: 584 ggtgttggcatttataac 601
>gb|CB637568.1|CB637568 OSJNEa04G24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04G24 5', mRNA sequence
Length = 395
Score = 270 bits (136), Expect = 2e-069
Identities = 265/308 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||| ||||||||||| || || ||||| || ||||||||||
Sbjct: 86 acccagactgcggtcctcaaagttgatgcctcaccgcaacttgctcgacagatccctgac 145
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 146 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 205
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| ||||||||| || ||||||| ||||||||||| ||
Sbjct: 206 gaacttgttagtaacagaggttttgaagctggacgccctcataccccatcaaacattgat 265
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 266 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 325
Query: 613 ttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgagtgtccagctggt 672
|| | ||| || | ||||||||| ||||||||||| ||||||||| | || |||||||||
Sbjct: 326 tttaatcggaatactgttgctctaaggatggaggttctctgtgataattgcccagctggt 385
Query: 673 ggtgttgg 680
||||||||
Sbjct: 386 ggtgttgg 393
>gb|CB637776.1|CB637776 OSJNEa04P09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04P09 5', mRNA sequence
Length = 496
Score = 236 bits (119), Expect = 2e-059
Identities = 233/271 (85%)
Strand = Plus / Plus
Query: 387 cctcaaggttgatgcctcgccacagcttgcccggaagatccctgaaacactgtttgggat 446
|||||||||||||||||| || || ||||| || |||||||||| ||||| ||||| ||
Sbjct: 220 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 279
Query: 447 attttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaa 506
|||||||||||| |||||||||||| | |||||||| |||||||| || ||||| |||||
Sbjct: 280 attttttgaggaaatcaaccatgcatgggctggtggaatatgggctgaacttgttagtaa 339
Query: 507 cagaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcat 566
||||||||| |||||||||||| ||||||| ||||||||||| || || |||||||| ||
Sbjct: 340 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 399
Query: 567 tggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacat 626
||| |||||||| ||| | ||||||||||||||||| || |||||||| | ||| || |
Sbjct: 400 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttactcggaatac 459
Query: 627 tgttgctctgaggatggaggtcctctgtgat 657
||||||||| | |||||| || |||||||||
Sbjct: 460 tgttgctctaacgatggacgttctctgtgat 490
>gb|CB639189.1|CB639189 OSJNEa08L04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08L04 5', mRNA sequence
Length = 280
Score = 236 bits (119), Expect = 2e-059
Identities = 227/263 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 17 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 76
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
||||| ||||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 77 acactatttggaatattttttgaggaaatcaaccatgcaggggctggtggaatatgggct 136
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 137 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 196
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| ||||| |||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 197 ccatggtccataattggtgatgactcttccatatttgtggcgactgatcgaacgtcatgt 256
Query: 613 ttcagtcgaaacattgttgctct 635
|| | ||| || | |||||||||
Sbjct: 257 tttactcggaatactgttgctct 279
>gb|CB678077.1|CB678077 OSJNEe15K07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15K07 5', mRNA sequence
Length = 510
Score = 232 bits (117), Expect = 4e-058
Identities = 222/257 (86%)
Strand = Plus / Plus
Query: 387 cctcaaggttgatgcctcgccacagcttgcccggaagatccctgaaacactgtttgggat 446
|||||||||||||||||| || || ||||| || |||||||||| ||||| ||||| ||
Sbjct: 254 cctcaaggttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 313
Query: 447 attttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaa 506
|||||||||||| |||||||||||||| |||||||| |||||||| || ||||| |||||
Sbjct: 314 attttttgaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaa 373
Query: 507 cagaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcat 566
|| |||||| |||||||||||| ||||||| ||||||||||| || || |||||||| ||
Sbjct: 374 cacaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 433
Query: 567 tggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacat 626
||| |||||||| ||| | ||||||||||||||||| || |||||||| || || || |
Sbjct: 434 tggcgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagacggaatac 493
Query: 627 tgttgctctgaggatgg 643
||||||||| |||||||
Sbjct: 494 tgttgctctaaggatgg 510
>gb|CB636965.1|CB636965 OSJNEa03A01.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03A01 5', mRNA sequence
Length = 530
Score = 228 bits (115), Expect = 5e-057
Identities = 214/247 (86%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| | || | ||| || ||||||| ||
Sbjct: 284 acccagactgcggtcctcaaggttgatgcctcactgcaacatgctcgacagatccccgac 343
Query: 433 acactgtttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggca 492
|| || ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 344 acgctatttggaatattttttgaggaaatcaaccatgcaggagctggtggaatatgggct 403
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggctctcatactccatcaaacatcgac 552
|| ||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| ||
Sbjct: 404 gaacttgttagtaacagaggttttgaagctggaggccctcataccccatcaaacattgat 463
Query: 553 ccgtggtccatcattggagatgactcctccgtgtttgtggcgactgatcgtacatcatgt 612
|| |||||||| |||||||||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 464 ccatggtccataattggagatgactcttccatatttgtggcgactgatcgaacgtcatgt 523
Query: 613 ttcagtc 619
|||||||
Sbjct: 524 ttcagtc 530
>gb|CB639113.1|CB639113 OSJNEa08G24.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08G24 5', mRNA sequence
Length = 500
Score = 228 bits (115), Expect = 5e-057
Identities = 229/267 (85%)
Strand = Plus / Plus
Query: 387 cctcaaggttgatgcctcgccacagcttgcccggaagatccctgaaacactgtttgggat 446
|||||| ||||||||||| || || ||||| || |||||||||| ||||| ||||| ||
Sbjct: 222 cctcaaagttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaat 281
Query: 447 attttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaa 506
|||||||||||| |||||||||||| | |||||||| |||||||| || ||||| | |||
Sbjct: 282 attttttgaggaaatcaaccatgcatgggctggtggaatatgggctgaacttgttactaa 341
Query: 507 cagaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcat 566
||||||||| |||||||||||| ||||||| ||||||||||| || || |||||||| ||
Sbjct: 342 cagaggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataat 401
Query: 567 tggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacat 626
||| |||||||| ||| | ||||||||||||||||| || |||||||| | ||| || |
Sbjct: 402 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgttttaatcggaatac 461
Query: 627 tgttgctctgaggatggaggtcctctg 653
||||||||| ||||||||||| |||||
Sbjct: 462 tgttgctctaaggatggaggttctctg 488
>gb|CB641073.1|CB641073 OSJNEa17L09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa17L09 5', mRNA sequence
Length = 607
Score = 216 bits (109), Expect = 2e-053
Identities = 166/185 (89%)
Strand = Plus / Plus
Query: 1000 cttatatccatgcttttggatttgaaaccacgattcttgagatttcctggaggttgtttt 1059
|||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||| |||
Sbjct: 1 cttatatctatgatgttggacttaaaaccacgattcttgagattccctggaggttgcttt 60
Query: 1060 gtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgggaa 1119
|| || || || ||| |||| || |||||||| ||||| ||||| |||||||||||||||
Sbjct: 61 gtggagggggaatggttaaggaacgcattcaggtggagggaatctattggtccatgggaa 120
Query: 1120 gagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttggatat 1179
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gagaggcctggacactttggggatgtttggcattactggactgatgatggccttggatat 180
Query: 1180 tatga 1184
|||||
Sbjct: 181 tatga 185
>gb|CB641099.1|CB641099 OSJNEa17N09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa17N09 5', mRNA sequence
Length = 569
Score = 216 bits (109), Expect = 2e-053
Identities = 166/185 (89%)
Strand = Plus / Plus
Query: 1000 cttatatccatgcttttggatttgaaaccacgattcttgagatttcctggaggttgtttt 1059
|||||||| ||| | ||||| || |||||||||||||||||||| ||||||||||| |||
Sbjct: 1 cttatatctatgatgttggacttaaaaccacgattcttgagattccctggaggttgcttt 60
Query: 1060 gtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgggaa 1119
|| || || || ||| |||| || |||||||| ||||| ||||| |||||||||||||||
Sbjct: 61 gtggagggggaatggttaaggaacgcattcaggtggagggaatctattggtccatgggaa 120
Query: 1120 gagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttggatat 1179
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gagaggcctggacactttggggatgtttggcattactggactgatgatggccttggatat 180
Query: 1180 tatga 1184
|||||
Sbjct: 181 tatga 185
>gb|CB641297.1|CB641297 OSJNEa18K10.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa18K10 5', mRNA sequence
Length = 350
Score = 200 bits (101), Expect = 1e-048
Identities = 161/181 (88%)
Strand = Plus / Plus
Query: 1002 tatatccatgcttttggatttgaaaccacgattcttgagatttcctggaggttgttttgt 1061
|||||| ||| | ||||| || ||||||| |||||||||||| ||||||||||| |||||
Sbjct: 1 tatatctatgatgttggacttaaaaccacaattcttgagattccctggaggttgctttgt 60
Query: 1062 agaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgggaaga 1121
|| || || ||| |||| || |||||||| ||||| ||||| |||||||||||||||||
Sbjct: 61 ggagggggaatggttaaggaacgcattcaggtggagggaatctattggtccatgggaaga 120
Query: 1122 gaggcctggacacttcggggatgtttggcattactggactgatgatgggcttggatatta 1181
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 gaggcctggacactttggggatgtttggcattactggactgatgatggccttggatatta 180
Query: 1182 t 1182
|
Sbjct: 181 t 181
>gb|CB637913.1|CB637913 OSJNEa05G23.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa05G23 5', mRNA sequence
Length = 410
Score = 198 bits (100), Expect = 5e-048
Identities = 211/248 (85%)
Strand = Plus / Plus
Query: 387 cctcaaggttgatgcctcgccacagcttgcccggaagatccctgaaacactgtttgggat 446
|||||| ||||||||||| || | ||||| || |||||||||| ||||| ||||| ||
Sbjct: 163 cctcaaagttgatgcctcaccgccacttgctcgacagatccctgacacactatttggaat 222
Query: 447 attttttgaggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaa 506
|||||||||||| |||||||||||| | |||||||| |||||||| || ||||| | |||
Sbjct: 223 attttttgaggaaatcaaccatgcatgggctggtggaatatgggctgaacttgttactaa 282
Query: 507 cagaggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcat 566
||||||||| |||||||||||| ||||||| ||||||||||| || || |||||||| ||
Sbjct: 283 cagaggtttagaagctggaggccctcataccccatcaaacattgatccatggtccataat 342
Query: 567 tggagatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacat 626
||| |||||||| ||| | ||||||||||||||||| || |||||| | ||||| || |
Sbjct: 343 tggtgatgactcttccatatttgtggcgactgatcgaacgtcatgtgttagtcggaatac 402
Query: 627 tgttgctc 634
||||||||
Sbjct: 403 tgttgctc 410
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Minus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 68619 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 68560
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 68559 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 68500
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 68499 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 68440
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 68439 cccaggattctggggcatg 68421
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 67495 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 67436
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 67435 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 67376
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 67375 ggccttggatattatgagtt 67356
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Minus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 67948 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 67889
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 67888 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 67829
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 67828 gacacttacaaggtacat 67811
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Minus
Query: 1057 tttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgg 1116
||||| |||||||| ||| |||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 29079 tttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtccatgg 29020
Query: 1117 gaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttgga 1176
||| |||| ||||| ||||| || ||||||| | |||| ||||| |||||||| || |||
Sbjct: 29019 gaacagagacctgggcactttggagatgtttagaattattggaccgatgatggcctagga 28960
Query: 1177 tattatgagtt 1187
|||||||||||
Sbjct: 28959 tattatgagtt 28949
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 59140 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 59081
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 59080 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 59021
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 59020 cttgggtattatgagtt 59004
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Minus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 60585 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 60526
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 60525 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 60466
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 60465 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 60416
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 67670 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 67611
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 67610 tgagattccctgg 67598
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 69451 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 69393
Score = 71.9 bits (36), Expect = 8e-010
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacaga 510
|||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 31450 aaccatgctggagctggtgggatatgggcggagcttgtcagtaacaga 31403
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 68172 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 68113
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 68112 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 68061
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 631 gctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataac 690
||||| ||||||||| | |||||||| | ||||||||||| |||||||| |||| |||
Sbjct: 30700 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 30641
Query: 691 ccaggtttttggggcatg 708
||||| || |||||||||
Sbjct: 30640 ccaggattctggggcatg 30623
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 29923 tttggtttgatcaagtgtcactcatgccatcagacacatacaagg 29879
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1360551 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360610
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 1360611 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360670
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 1360671 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360730
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1360731 cccaggattctggggcatg 1360749
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 1361675 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 1361734
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1361735 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1361794
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 1361795 ggccttggatattatgagtt 1361814
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Plus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 1361222 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 1361281
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 1361282 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 1361341
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 1361342 gacacttacaaggtacat 1361359
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 1057 tttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgg 1116
||||| |||||||| ||| |||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 1400091 tttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtccatgg 1400150
Query: 1117 gaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttgga 1176
||| |||| ||||| ||||| || ||||||| | |||| ||||| |||||||| || |||
Sbjct: 1400151 gaacagagacctgggcactttggagatgtttagaattattggaccgatgatggcctagga 1400210
Query: 1177 tattatgagtt 1187
|||||||||||
Sbjct: 1400211 tattatgagtt 1400221
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 1370030 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 1370089
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 1370090 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 1370149
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 1370150 cttgggtattatgagtt 1370166
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 1368585 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 1368644
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 1368645 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 1368704
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 1368705 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 1368754
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 1361500 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 1361559
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 1361560 tgagattccctgg 1361572
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1359719 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 1359777
Score = 71.9 bits (36), Expect = 8e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacaga 510
|||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1397720 aaccatgctggagctggtgggatatgggcggagcttgtcagtaacaga 1397767
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 1360998 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361057
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 1361058 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1361109
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 631 gctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataac 690
||||| ||||||||| | |||||||| | ||||||||||| |||||||| |||| |||
Sbjct: 1398470 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1398529
Query: 691 ccaggtttttggggcatg 708
||||| || |||||||||
Sbjct: 1398530 ccaggattctggggcatg 1398547
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 1399247 tttggtttgatcaagtgtcactcatgccatcagacacatacaagg 1399291
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Minus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 19659 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 19600
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 19599 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 19540
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 19539 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 19480
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 19479 cccaggattctggggcatg 19461
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Minus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 18535 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 18476
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 18475 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 18416
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 18415 ggccttggatattatgagtt 18396
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Minus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 18988 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 18929
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 18928 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 18869
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 18868 gacacttacaaggtacat 18851
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Minus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 10179 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 10120
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 10119 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 10060
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 10059 cttgggtattatgagtt 10043
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Minus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 11624 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 11565
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 11564 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 11505
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 11504 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 11455
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 18710 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 18651
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 18650 tgagattccctgg 18638
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 20491 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 20433
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Minus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 19212 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 19153
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 19152 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 19101
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1285668 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1285727
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 1285728 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1285787
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 1285788 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1285847
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1285848 cccaggattctggggcatg 1285866
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 1286792 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 1286851
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1286852 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1286911
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 1286912 ggccttggatattatgagtt 1286931
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Plus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 1286339 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 1286398
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 1286399 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 1286458
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 1286459 gacacttacaaggtacat 1286476
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 1057 tttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgg 1116
||||| |||||||| ||| |||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 1328245 tttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtccatgg 1328304
Query: 1117 gaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttgga 1176
||| |||| ||||| ||||| || ||||||| | |||| ||||| |||||||| || |||
Sbjct: 1328305 gaacagagacctgggcactttggagatgtttagaattattggaccgatgatggcctagga 1328364
Query: 1177 tattatgagtt 1187
|||||||||||
Sbjct: 1328365 tattatgagtt 1328375
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 1295148 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 1295207
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 1295208 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 1295267
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 1295268 cttgggtattatgagtt 1295284
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 1293703 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 1293762
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 1293763 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 1293822
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 1293823 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 1293872
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 1286617 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 1286676
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 1286677 tgagattccctgg 1286689
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1284836 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 1284894
Score = 71.9 bits (36), Expect = 8e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacaga 510
|||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1325876 aaccatgctggagctggtgggatatgggcggagcttgtcagtaacaga 1325923
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 1286115 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1286174
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 1286175 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1286226
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 631 gctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataac 690
||||| ||||||||| | |||||||| | ||||||||||| |||||||| |||| |||
Sbjct: 1326626 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1326685
Query: 691 ccaggtttttggggcatg 708
||||| || |||||||||
Sbjct: 1326686 ccaggattctggggcatg 1326703
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 1327401 tttggtttgatcaagtgtcactcatgccatcagacacatacaagg 1327445
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1285668 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1285727
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 1285728 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1285787
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 1285788 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1285847
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1285848 cccaggattctggggcatg 1285866
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 1286792 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 1286851
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1286852 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1286911
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 1286912 ggccttggatattatgagtt 1286931
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Plus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 1286339 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 1286398
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 1286399 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 1286458
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 1286459 gacacttacaaggtacat 1286476
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 1057 tttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgg 1116
||||| |||||||| ||| |||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 1328245 tttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtccatgg 1328304
Query: 1117 gaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttgga 1176
||| |||| ||||| ||||| || ||||||| | |||| ||||| |||||||| || |||
Sbjct: 1328305 gaacagagacctgggcactttggagatgtttagaattattggaccgatgatggcctagga 1328364
Query: 1177 tattatgagtt 1187
|||||||||||
Sbjct: 1328365 tattatgagtt 1328375
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 1295148 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 1295207
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 1295208 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 1295267
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 1295268 cttgggtattatgagtt 1295284
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 1293703 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 1293762
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 1293763 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 1293822
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 1293823 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 1293872
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 1286617 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 1286676
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 1286677 tgagattccctgg 1286689
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1284836 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 1284894
Score = 71.9 bits (36), Expect = 8e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacaga 510
|||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1325876 aaccatgctggagctggtgggatatgggcggagcttgtcagtaacaga 1325923
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 1286115 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1286174
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 1286175 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1286226
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 631 gctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataac 690
||||| ||||||||| | |||||||| | ||||||||||| |||||||| |||| |||
Sbjct: 1326626 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1326685
Query: 691 ccaggtttttggggcatg 708
||||| || |||||||||
Sbjct: 1326686 ccaggattctggggcatg 1326703
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 1327401 tttggtttgatcaagtgtcactcatgccatcagacacatacaagg 1327445
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1360550 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360609
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 1360610 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360669
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 1360670 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360729
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1360730 cccaggattctggggcatg 1360748
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 1361674 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 1361733
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1361734 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1361793
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 1361794 ggccttggatattatgagtt 1361813
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Plus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 1361221 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 1361280
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 1361281 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 1361340
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 1361341 gacacttacaaggtacat 1361358
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 1057 tttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgg 1116
||||| |||||||| ||| |||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 1400090 tttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtccatgg 1400149
Query: 1117 gaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttgga 1176
||| |||| ||||| ||||| || ||||||| | |||| ||||| |||||||| || |||
Sbjct: 1400150 gaacagagacctgggcactttggagatgtttagaattattggaccgatgatggcctagga 1400209
Query: 1177 tattatgagtt 1187
|||||||||||
Sbjct: 1400210 tattatgagtt 1400220
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 1370029 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 1370088
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 1370089 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 1370148
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 1370149 cttgggtattatgagtt 1370165
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 1368584 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 1368643
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 1368644 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 1368703
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 1368704 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 1368753
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 1361499 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 1361558
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 1361559 tgagattccctgg 1361571
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1359718 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 1359776
Score = 71.9 bits (36), Expect = 8e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacaga 510
|||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1397719 aaccatgctggagctggtgggatatgggcggagcttgtcagtaacaga 1397766
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 1360997 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361056
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 1361057 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1361108
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 631 gctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataac 690
||||| ||||||||| | |||||||| | ||||||||||| |||||||| |||| |||
Sbjct: 1398469 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1398528
Query: 691 ccaggtttttggggcatg 708
||||| || |||||||||
Sbjct: 1398529 ccaggattctggggcatg 1398546
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 1399246 tttggtttgatcaagtgtcactcatgccatcagacacatacaagg 1399290
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 196 bits (99), Expect = 2e-047
Identities = 174/199 (87%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1360550 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1360609
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
||||||||| ||| | ||||||||||||||||| || |||||||||||||| || | |||
Sbjct: 1360610 agatgactcttccatatttgtggcgactgatcgaacgtcatgtttcagtcggaatactgt 1360669
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| |||||||| | || ||||||||||||||||| |||||||
Sbjct: 1360670 tgctctaaggatggaggttctctgtgacaattgcccagctggtggtgttggcatttataa 1360729
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1360730 cccaggattctggggcatg 1360748
Score = 182 bits (92), Expect = 3e-043
Identities = 128/140 (91%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| || || || ||||| ||| ||||||| |||||||| ||||| ||||| |||
Sbjct: 1361674 ggaggttgcttcgtggagggtgaatggttaagaaacgcattcaggtggagggaatctatt 1361733
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1361734 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1361793
Query: 1168 gggcttggatattatgagtt 1187
|| |||||||||||||||||
Sbjct: 1361794 ggccttggatattatgagtt 1361813
Score = 147 bits (74), Expect = 2e-032
Identities = 122/138 (88%)
Strand = Plus / Plus
Query: 847 aattggacaaaagtggagcagaagctggttgctaaaggaaccaatagaacatcaaggctt 906
|||||||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||
Sbjct: 1361221 aattggacaaaactggagcagaagttggttgctaaaggaacaaatagaacctcaaggctt 1361280
Query: 907 caaataacaacgaacaaaaaaggagttgtttggcttgatcaagtatcactcatgcctgaa 966
||||||||||| | ||| || |||||||| ||| |||||||||| || |||||| ||| |
Sbjct: 1361281 caaataacaactaccaagaagggagttgtatggtttgatcaagtctctctcatgtctgca 1361340
Query: 967 gacacatacaagggacat 984
||||| ||||||| ||||
Sbjct: 1361341 gacacttacaaggtacat 1361358
Score = 117 bits (59), Expect = 1e-023
Identities = 113/131 (86%)
Strand = Plus / Plus
Query: 1057 tttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggtccatgg 1116
||||| |||||||| ||| |||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 1400090 tttgttgaaggtgattggttaagaaatgctttcaggtggagagaaactattggtccatgg 1400149
Query: 1117 gaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggcttgga 1176
||| |||| ||||| ||||| || ||||||| | |||| ||||| |||||||| || |||
Sbjct: 1400150 gaacagagacctgggcactttggagatgtttagaattattggaccgatgatggcctagga 1400209
Query: 1177 tattatgagtt 1187
|||||||||||
Sbjct: 1400210 tattatgagtt 1400220
Score = 105 bits (53), Expect = 5e-020
Identities = 116/137 (84%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||||||||| |||| ||| | ||||||
Sbjct: 1370029 ggttgctttgtcgaaggcaattggttaaaaaatgcattcaggtggaaggaaactattggt 1370088
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| |||||||||| || ||||| ||||| |||||||| ||||||||
Sbjct: 1370089 ccatgggaagagagacctggacactatggagatgtctggcactactggacggatgatggc 1370148
Query: 1171 cttggatattatgagtt 1187
||||| |||||||||||
Sbjct: 1370149 cttgggtattatgagtt 1370165
Score = 99.6 bits (50), Expect = 3e-018
Identities = 140/170 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| || ||| | ||||
Sbjct: 1368584 catcaaacattgacccatggtccatcattggagatgaatcctctgttcacgtgacaactg 1368643
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| ||||||| | ||||| ||||| ||||||| |
Sbjct: 1368644 atcgctcatcctgtttcagtcaaaatcctgttgctgtaaggatagaggttgtctgtgacg 1368703
Query: 659 agtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
| |||||||| ||||||||||| |||| || ||||| ||||||||||||
Sbjct: 1368704 attgtccagccggtggtgttggaatttacaatccaggattttggggcatg 1368753
Score = 81.8 bits (41), Expect = 8e-013
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 977 agggacatggtttccgcacagaacttatatccatgcttttggatttgaaaccacgattct 1036
||||||||||||| ||||||||||| ||||| ||| | ||||| || |||||||||||||
Sbjct: 1361499 agggacatggttttcgcacagaactaatatctatgatgttggacttaaaaccacgattct 1361558
Query: 1037 tgagatttcctgg 1049
||||||| |||||
Sbjct: 1361559 tgagattccctgg 1361571
Score = 77.8 bits (39), Expect = 1e-011
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| ||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1359718 aggaaatcaaccatgcaggagctggtggaatatgggctgaacttgttagtaacagaggt 1359776
Score = 71.9 bits (36), Expect = 8e-010
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacaga 510
|||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1397719 aaccatgctggagctggtgggatatgggcggagcttgtcagtaacaga 1397766
Score = 63.9 bits (32), Expect = 2e-007
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| |||||||| | || ||||||||| | || ||||||||
Sbjct: 1360997 gaacatagaagatggaaagacctacaatttagtgatgtatgttaaatcaccagaaactgt 1361056
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttca 819
||| | |||||||| || ||||| |||||||||| |||||| ||||||||
Sbjct: 1361057 ggagttgacagtttccttgacaagttctgatgggtcgcaaaatctggcttca 1361108
Score = 60.0 bits (30), Expect = 3e-006
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 631 gctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataac 690
||||| ||||||||| | |||||||| | ||||||||||| |||||||| |||| |||
Sbjct: 1398469 gctctaaggatggagattctctgtgagaattgtccagctggcggtgttggcatttacaac 1398528
Query: 691 ccaggtttttggggcatg 708
||||| || |||||||||
Sbjct: 1398529 ccaggattctggggcatg 1398546
Score = 50.1 bits (25), Expect = 0.003
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 1399246 tttggtttgatcaagtgtcactcatgccatcagacacatacaagg 1399290
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 188 bits (95), Expect = 5e-045
Identities = 173/199 (86%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 75208 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 75267
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
|||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | |||
Sbjct: 75268 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 75327
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||
Sbjct: 75328 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 75387
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 75388 cccagggttctggggcatg 75406
Score = 168 bits (85), Expect = 4e-039
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| |||
Sbjct: 76321 ggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctatt 76380
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 76381 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 76440
Query: 1168 gggcttggatattatga 1184
|| ||||||||||||||
Sbjct: 76441 ggccttggatattatga 76457
Score = 168 bits (85), Expect = 4e-039
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 832 gtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaat 891
|||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |||
Sbjct: 75855 gtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaat 75914
Query: 892 agaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagta 951
||||| |||||||||||||||||||| ||||| || |||||||| ||| |||||||||||
Sbjct: 75915 agaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagta 75974
Query: 952 tcactcatgcctgaagacacatacaagggacat 984
|| |||||||||| |||||| ||||||| ||||
Sbjct: 75975 tcgctcatgcctgcagacacttacaaggtacat 76007
Score = 91.7 bits (46), Expect = 8e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||| ||||| |||| ||| | ||||||
Sbjct: 84296 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 84355
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| ||||| |||| || ||||||||||| |||||||| ||||||||
Sbjct: 84356 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 84415
Query: 1171 cttggatattatga 1184
||||| ||||||||
Sbjct: 84416 cttgggtattatga 84429
Score = 91.7 bits (46), Expect = 8e-016
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 968 acacatacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaac 1027
||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 76140 acacataca-gggacatggttttcgcacagaacttatatctatgatgttggacttaaaac 76198
Query: 1028 cacgattcttgagatttcctgg 1049
|||||||||||||||| |||||
Sbjct: 76199 cacgattcttgagattccctgg 76220
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| ||| || | ||||
Sbjct: 82853 catcaaacattgacccatggtccatcattggagatgaatcctctgtgcacgtcacaactg 82912
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| |||||| | ||||| ||||| ||||||| |
Sbjct: 82913 atcgctcatcctgtttcagtcaaaatccggttgctgtaaggatagaggttgtctgtgacg 82972
Query: 659 agtgtccagctggtggtgttgg 680
| ||||||||||||||||||||
Sbjct: 82973 attgtccagctggtggtgttgg 82994
Score = 77.8 bits (39), Expect = 1e-011
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 105433 aaccatgccggagctggtgggatatgggcggagcttgtcagtaacagaggt 105483
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| ||||||| | || ||||||||| | || ||||||||
Sbjct: 75644 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 75703
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctac 824
||| | |||||||| |||||||| |||||||||| |||||| ||||||||| ||||
Sbjct: 75704 ggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactac 75760
Score = 73.8 bits (37), Expect = 2e-010
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 74529 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 74588
Query: 433 acactgtttgggatattttttgagg 457
||||| ||||| |||||||||||||
Sbjct: 74589 acactatttggaatattttttgagg 74613
Score = 71.9 bits (36), Expect = 8e-010
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 541 tcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactgat 600
||||| || ||||| ||||| |||||||||||||| ||||| | | || ||||||||
Sbjct: 106161 tcaaatattgacccatggtctatcattggagatgaatcctctatatacgtcacgactgat 106220
Query: 601 cgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgag 660
| |||| |||||| | | ||| ||||||||||| ||||||||| | ||||||||| |
Sbjct: 106221 tgctcatcttgtttccgccaaaatattgttgctctaaggatggagattctctgtgataat 106280
Query: 661 tgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
|||||||| || ||||| || |||| |||||||| || |||||||||
Sbjct: 106281 tgtccagccggcggtgtcggcatttacaacccaggattctggggcatg 106328
Score = 69.9 bits (35), Expect = 3e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| |||||||||||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 74790 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 74848
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 106994 tttggtttgatcaagtgtcactcatgccttcagacacatacaagg 107038
Score = 46.1 bits (23), Expect = 0.044
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 937 tggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 83732 tggcttgatcaggtgtcactcatgccttcagaaacatacaagg 83774
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 188 bits (95), Expect = 5e-045
Identities = 173/199 (86%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 454695 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 454754
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
|||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | |||
Sbjct: 454755 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 454814
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||
Sbjct: 454815 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 454874
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 454875 cccagggttctggggcatg 454893
Score = 168 bits (85), Expect = 4e-039
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| |||
Sbjct: 455808 ggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctatt 455867
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 455868 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 455927
Query: 1168 gggcttggatattatga 1184
|| ||||||||||||||
Sbjct: 455928 ggccttggatattatga 455944
Score = 168 bits (85), Expect = 4e-039
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 832 gtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaat 891
|||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |||
Sbjct: 455342 gtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaat 455401
Query: 892 agaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagta 951
||||| |||||||||||||||||||| ||||| || |||||||| ||| |||||||||||
Sbjct: 455402 agaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagta 455461
Query: 952 tcactcatgcctgaagacacatacaagggacat 984
|| |||||||||| |||||| ||||||| ||||
Sbjct: 455462 tcgctcatgcctgcagacacttacaaggtacat 455494
Score = 91.7 bits (46), Expect = 8e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||| ||||| |||| ||| | ||||||
Sbjct: 463783 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 463842
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| ||||| |||| || ||||||||||| |||||||| ||||||||
Sbjct: 463843 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 463902
Query: 1171 cttggatattatga 1184
||||| ||||||||
Sbjct: 463903 cttgggtattatga 463916
Score = 91.7 bits (46), Expect = 8e-016
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 968 acacatacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaac 1027
||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 455627 acacataca-gggacatggttttcgcacagaacttatatctatgatgttggacttaaaac 455685
Query: 1028 cacgattcttgagatttcctgg 1049
|||||||||||||||| |||||
Sbjct: 455686 cacgattcttgagattccctgg 455707
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| ||| || | ||||
Sbjct: 462340 catcaaacattgacccatggtccatcattggagatgaatcctctgtgcacgtcacaactg 462399
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| |||||| | ||||| ||||| ||||||| |
Sbjct: 462400 atcgctcatcctgtttcagtcaaaatccggttgctgtaaggatagaggttgtctgtgacg 462459
Query: 659 agtgtccagctggtggtgttgg 680
| ||||||||||||||||||||
Sbjct: 462460 attgtccagctggtggtgttgg 462481
Score = 77.8 bits (39), Expect = 1e-011
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 484920 aaccatgccggagctggtgggatatgggcggagcttgtcagtaacagaggt 484970
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| ||||||| | || ||||||||| | || ||||||||
Sbjct: 455131 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 455190
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctac 824
||| | |||||||| |||||||| |||||||||| |||||| ||||||||| ||||
Sbjct: 455191 ggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactac 455247
Score = 73.8 bits (37), Expect = 2e-010
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 454016 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 454075
Query: 433 acactgtttgggatattttttgagg 457
||||| ||||| |||||||||||||
Sbjct: 454076 acactatttggaatattttttgagg 454100
Score = 71.9 bits (36), Expect = 8e-010
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 541 tcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactgat 600
||||| || ||||| ||||| |||||||||||||| ||||| | | || ||||||||
Sbjct: 485648 tcaaatattgacccatggtctatcattggagatgaatcctctatatacgtcacgactgat 485707
Query: 601 cgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgag 660
| |||| |||||| | | ||| ||||||||||| ||||||||| | ||||||||| |
Sbjct: 485708 tgctcatcttgtttccgccaaaatattgttgctctaaggatggagattctctgtgataat 485767
Query: 661 tgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
|||||||| || ||||| || |||| |||||||| || |||||||||
Sbjct: 485768 tgtccagccggcggtgtcggcatttacaacccaggattctggggcatg 485815
Score = 69.9 bits (35), Expect = 3e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| |||||||||||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 454277 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 454335
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 486481 tttggtttgatcaagtgtcactcatgccttcagacacatacaagg 486525
Score = 46.1 bits (23), Expect = 0.044
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 937 tggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 463219 tggcttgatcaggtgtcactcatgccttcagaaacatacaagg 463261
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 188 bits (95), Expect = 5e-045
Identities = 173/199 (86%)
Strand = Plus / Minus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 26071 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 26012
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
|||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | |||
Sbjct: 26011 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 25952
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||
Sbjct: 25951 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 25892
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 25891 cccagggttctggggcatg 25873
Score = 168 bits (85), Expect = 4e-039
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 832 gtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaat 891
|||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |||
Sbjct: 25423 gtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaat 25364
Query: 892 agaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagta 951
||||| |||||||||||||||||||| ||||| || |||||||| ||| |||||||||||
Sbjct: 25363 agaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagta 25304
Query: 952 tcactcatgcctgaagacacatacaagggacat 984
|| |||||||||| |||||| ||||||| ||||
Sbjct: 25303 tcgctcatgcctgcagacacttacaaggtacat 25271
Score = 168 bits (85), Expect = 4e-039
Identities = 124/137 (90%)
Strand = Plus / Minus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| |||
Sbjct: 24957 ggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctatt 24898
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 24897 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 24838
Query: 1168 gggcttggatattatga 1184
|| ||||||||||||||
Sbjct: 24837 ggccttggatattatga 24821
Score = 91.7 bits (46), Expect = 8e-016
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 968 acacatacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaac 1027
||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 25138 acacataca-gggacatggttttcgcacagaacttatatctatgatgttggacttaaaac 25080
Query: 1028 cacgattcttgagatttcctgg 1049
|||||||||||||||| |||||
Sbjct: 25079 cacgattcttgagattccctgg 25058
Score = 91.7 bits (46), Expect = 8e-016
Identities = 112/134 (83%)
Strand = Plus / Minus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||| ||||| |||| ||| | ||||||
Sbjct: 16982 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 16923
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| ||||| |||| || ||||||||||| |||||||| ||||||||
Sbjct: 16922 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 16863
Query: 1171 cttggatattatga 1184
||||| ||||||||
Sbjct: 16862 cttgggtattatga 16849
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Minus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| ||| || | ||||
Sbjct: 18425 catcaaacattgacccatggtccatcattggagatgaatcctctgtgcacgtcacaactg 18366
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| |||||| | ||||| ||||| ||||||| |
Sbjct: 18365 atcgctcatcctgtttcagtcaaaatccggttgctgtaaggatagaggttgtctgtgacg 18306
Query: 659 agtgtccagctggtggtgttgg 680
| ||||||||||||||||||||
Sbjct: 18305 attgtccagctggtggtgttgg 18284
Score = 73.8 bits (37), Expect = 2e-010
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 26750 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 26691
Query: 433 acactgtttgggatattttttgagg 457
||||| ||||| |||||||||||||
Sbjct: 26690 acactatttggaatattttttgagg 26666
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| ||||||| | || ||||||||| | || ||||||||
Sbjct: 25634 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 25575
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctac 824
||| | |||||||| |||||||| |||||||||| |||||| ||||||||| ||||
Sbjct: 25574 ggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactac 25518
Score = 69.9 bits (35), Expect = 3e-009
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| |||||||||||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 26489 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 26431
Score = 46.1 bits (23), Expect = 0.044
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 937 tggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 17546 tggcttgatcaggtgtcactcatgccttcagaaacatacaagg 17504
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 188 bits (95), Expect = 5e-045
Identities = 173/199 (86%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1149559 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1149618
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
|||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | |||
Sbjct: 1149619 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1149678
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||
Sbjct: 1149679 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1149738
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1149739 cccagggttctggggcatg 1149757
Score = 168 bits (85), Expect = 4e-039
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| |||
Sbjct: 1150673 ggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctatt 1150732
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1150733 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1150792
Query: 1168 gggcttggatattatga 1184
|| ||||||||||||||
Sbjct: 1150793 ggccttggatattatga 1150809
Score = 168 bits (85), Expect = 4e-039
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 832 gtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaat 891
|||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |||
Sbjct: 1150207 gtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaat 1150266
Query: 892 agaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagta 951
||||| |||||||||||||||||||| ||||| || |||||||| ||| |||||||||||
Sbjct: 1150267 agaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagta 1150326
Query: 952 tcactcatgcctgaagacacatacaagggacat 984
|| |||||||||| |||||| ||||||| ||||
Sbjct: 1150327 tcgctcatgcctgcagacacttacaaggtacat 1150359
Score = 91.7 bits (46), Expect = 8e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||| ||||| |||| ||| | ||||||
Sbjct: 1158648 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 1158707
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| ||||| |||| || ||||||||||| |||||||| ||||||||
Sbjct: 1158708 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 1158767
Query: 1171 cttggatattatga 1184
||||| ||||||||
Sbjct: 1158768 cttgggtattatga 1158781
Score = 91.7 bits (46), Expect = 8e-016
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 968 acacatacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaac 1027
||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 1150492 acacataca-gggacatggttttcgcacagaacttatatctatgatgttggacttaaaac 1150550
Query: 1028 cacgattcttgagatttcctgg 1049
|||||||||||||||| |||||
Sbjct: 1150551 cacgattcttgagattccctgg 1150572
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| ||| || | ||||
Sbjct: 1157205 catcaaacattgacccatggtccatcattggagatgaatcctctgtgcacgtcacaactg 1157264
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| |||||| | ||||| ||||| ||||||| |
Sbjct: 1157265 atcgctcatcctgtttcagtcaaaatccggttgctgtaaggatagaggttgtctgtgacg 1157324
Query: 659 agtgtccagctggtggtgttgg 680
| ||||||||||||||||||||
Sbjct: 1157325 attgtccagctggtggtgttgg 1157346
Score = 77.8 bits (39), Expect = 1e-011
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1180713 aaccatgccggagctggtgggatatgggcggagcttgtcagtaacagaggt 1180763
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| ||||||| | || ||||||||| | || ||||||||
Sbjct: 1149996 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 1150055
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctac 824
||| | |||||||| |||||||| |||||||||| |||||| ||||||||| ||||
Sbjct: 1150056 ggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactac 1150112
Score = 73.8 bits (37), Expect = 2e-010
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 1148880 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 1148939
Query: 433 acactgtttgggatattttttgagg 457
||||| ||||| |||||||||||||
Sbjct: 1148940 acactatttggaatattttttgagg 1148964
Score = 69.9 bits (35), Expect = 3e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| |||||||||||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1149141 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 1149199
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 1182275 tttggtttgatcaagtgtcactcatgccttcagacacatacaagg 1182319
Score = 58.0 bits (29), Expect = 1e-005
Identities = 135/169 (79%), Gaps = 1/169 (0%)
Strand = Plus / Plus
Query: 541 tcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactgat 600
||||| || ||||| ||||| |||||||||||||| ||||| | | || ||||||||
Sbjct: 1181441 tcaaatattgacccatggtctatcattggagatgaatcctctatatacgtcacgactgat 1181500
Query: 601 cgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtg-atga 659
| |||| |||||| | | ||| ||||||||||| ||||||||| | ||||||| || |
Sbjct: 1181501 tgctcatcttgtttccgccaaaatattgttgctctaaggatggagattctctgtgaataa 1181560
Query: 660 gtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
|||||||| || ||||| || |||| |||||||| || |||||||||
Sbjct: 1181561 ttgtccagccggcggtgtcggcatttacaacccaggattctggggcatg 1181609
Score = 46.1 bits (23), Expect = 0.044
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 937 tggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 1158084 tggcttgatcaggtgtcactcatgccttcagaaacatacaagg 1158126
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 188 bits (95), Expect = 5e-045
Identities = 173/199 (86%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1451851 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1451910
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
|||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | |||
Sbjct: 1451911 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1451970
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||
Sbjct: 1451971 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1452030
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1452031 cccagggttctggggcatg 1452049
Score = 168 bits (85), Expect = 4e-039
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| |||
Sbjct: 1452965 ggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctatt 1453024
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1453025 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1453084
Query: 1168 gggcttggatattatga 1184
|| ||||||||||||||
Sbjct: 1453085 ggccttggatattatga 1453101
Score = 168 bits (85), Expect = 4e-039
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 832 gtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaat 891
|||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |||
Sbjct: 1452499 gtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaat 1452558
Query: 892 agaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagta 951
||||| |||||||||||||||||||| ||||| || |||||||| ||| |||||||||||
Sbjct: 1452559 agaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagta 1452618
Query: 952 tcactcatgcctgaagacacatacaagggacat 984
|| |||||||||| |||||| ||||||| ||||
Sbjct: 1452619 tcgctcatgcctgcagacacttacaaggtacat 1452651
Score = 91.7 bits (46), Expect = 8e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||| ||||| |||| ||| | ||||||
Sbjct: 1460940 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 1460999
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| ||||| |||| || ||||||||||| |||||||| ||||||||
Sbjct: 1461000 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 1461059
Query: 1171 cttggatattatga 1184
||||| ||||||||
Sbjct: 1461060 cttgggtattatga 1461073
Score = 91.7 bits (46), Expect = 8e-016
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 968 acacatacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaac 1027
||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 1452784 acacataca-gggacatggttttcgcacagaacttatatctatgatgttggacttaaaac 1452842
Query: 1028 cacgattcttgagatttcctgg 1049
|||||||||||||||| |||||
Sbjct: 1452843 cacgattcttgagattccctgg 1452864
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| ||| || | ||||
Sbjct: 1459497 catcaaacattgacccatggtccatcattggagatgaatcctctgtgcacgtcacaactg 1459556
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| |||||| | ||||| ||||| ||||||| |
Sbjct: 1459557 atcgctcatcctgtttcagtcaaaatccggttgctgtaaggatagaggttgtctgtgacg 1459616
Query: 659 agtgtccagctggtggtgttgg 680
| ||||||||||||||||||||
Sbjct: 1459617 attgtccagctggtggtgttgg 1459638
Score = 77.8 bits (39), Expect = 1e-011
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1483005 aaccatgccggagctggtgggatatgggcggagcttgtcagtaacagaggt 1483055
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| ||||||| | || ||||||||| | || ||||||||
Sbjct: 1452288 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 1452347
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctac 824
||| | |||||||| |||||||| |||||||||| |||||| ||||||||| ||||
Sbjct: 1452348 ggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactac 1452404
Score = 73.8 bits (37), Expect = 2e-010
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 1451172 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 1451231
Query: 433 acactgtttgggatattttttgagg 457
||||| ||||| |||||||||||||
Sbjct: 1451232 acactatttggaatattttttgagg 1451256
Score = 69.9 bits (35), Expect = 3e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| |||||||||||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1451433 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 1451491
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 1484567 tttggtttgatcaagtgtcactcatgccttcagacacatacaagg 1484611
Score = 58.0 bits (29), Expect = 1e-005
Identities = 135/169 (79%), Gaps = 1/169 (0%)
Strand = Plus / Plus
Query: 541 tcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactgat 600
||||| || ||||| ||||| |||||||||||||| ||||| | | || ||||||||
Sbjct: 1483733 tcaaatattgacccatggtctatcattggagatgaatcctctatatacgtcacgactgat 1483792
Query: 601 cgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtg-atga 659
| |||| |||||| | | ||| ||||||||||| ||||||||| | ||||||| || |
Sbjct: 1483793 tgctcatcttgtttccgccaaaatattgttgctctaaggatggagattctctgtgaataa 1483852
Query: 660 gtgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
|||||||| || ||||| || |||| |||||||| || |||||||||
Sbjct: 1483853 ttgtccagccggcggtgtcggcatttacaacccaggattctggggcatg 1483901
Score = 46.1 bits (23), Expect = 0.044
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 937 tggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 1460376 tggcttgatcaggtgtcactcatgccttcagaaacatacaagg 1460418
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 188 bits (95), Expect = 5e-045
Identities = 173/199 (86%)
Strand = Plus / Plus
Query: 510 aggtttcgaagctggaggctctcatactccatcaaacatcgacccgtggtccatcattgg 569
|||||| |||||||||||| ||||||| ||||||||||| || || |||||||| |||||
Sbjct: 1456413 aggttttgaagctggaggccctcataccccatcaaacattgatccatggtccataattgg 1456472
Query: 570 agatgactcctccgtgtttgtggcgactgatcgtacatcatgtttcagtcgaaacattgt 629
|||||||| ||| | ||||||||||||||||| || |||||||| ||||| || | |||
Sbjct: 1456473 tgatgactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgt 1456532
Query: 630 tgctctgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataa 689
|||||| ||||||||||| ||||||||| | || ||||||||||||||||| |||||||
Sbjct: 1456533 tgctctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataa 1456592
Query: 690 cccaggtttttggggcatg 708
|||||| || |||||||||
Sbjct: 1456593 cccagggttctggggcatg 1456611
Score = 168 bits (85), Expect = 4e-039
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 1048 ggaggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaatt 1107
|||||||| ||||| || || || ||| |||| || |||||||| ||||| ||||| |||
Sbjct: 1457526 ggaggttgctttgtggagggggaatggttaaggaacgcattcaggtggagggaatctatt 1457585
Query: 1108 ggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgat 1167
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1457586 ggtccatgggaagagaggcctggacactttggggatgtttggcattactggactgatgat 1457645
Query: 1168 gggcttggatattatga 1184
|| ||||||||||||||
Sbjct: 1457646 ggccttggatattatga 1457662
Score = 168 bits (85), Expect = 4e-039
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 832 gtttctggcacatcaaattggacaaaagtggagcagaagctggttgctaaaggaaccaat 891
|||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |||
Sbjct: 1457060 gtttctggtgcatcgaattggacaaaactggagcagaagttggttgctcaaggaacaaat 1457119
Query: 892 agaacatcaaggcttcaaataacaacgaacaaaaaaggagttgtttggcttgatcaagta 951
||||| |||||||||||||||||||| ||||| || |||||||| ||| |||||||||||
Sbjct: 1457120 agaacctcaaggcttcaaataacaactaacaagaagggagttgtatggtttgatcaagta 1457179
Query: 952 tcactcatgcctgaagacacatacaagggacat 984
|| |||||||||| |||||| ||||||| ||||
Sbjct: 1457180 tcgctcatgcctgcagacacttacaaggtacat 1457212
Score = 91.7 bits (46), Expect = 8e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||| ||||| ||||| | ||| ||| |||||| ||||| |||| ||| | ||||||
Sbjct: 1465501 ggttgctttgttgaaggcaattggttaaaaaatgcgttcaggtggaaggaaactattggt 1465560
Query: 1111 ccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatggg 1170
|||||||||||||| ||||| |||| || ||||||||||| |||||||| ||||||||
Sbjct: 1465561 ccatgggaagagagacctgggcactatggagatgtttggcactactggaccgatgatggc 1465620
Query: 1171 cttggatattatga 1184
||||| ||||||||
Sbjct: 1465621 cttgggtattatga 1465634
Score = 91.7 bits (46), Expect = 8e-016
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 968 acacatacaagggacatggtttccgcacagaacttatatccatgcttttggatttgaaac 1027
||||||||| |||||||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 1457345 acacataca-gggacatggttttcgcacagaacttatatctatgatgttggacttaaaac 1457403
Query: 1028 cacgattcttgagatttcctgg 1049
|||||||||||||||| |||||
Sbjct: 1457404 cacgattcttgagattccctgg 1457425
Score = 83.8 bits (42), Expect = 2e-013
Identities = 117/142 (82%)
Strand = Plus / Plus
Query: 539 catcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactg 598
|||||||||| ||||| |||||||||||||||||||| ||||| ||| || | ||||
Sbjct: 1464058 catcaaacattgacccatggtccatcattggagatgaatcctctgtgcacgtcacaactg 1464117
Query: 599 atcgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatg 658
|||| |||| |||||||||| ||| |||||| | ||||| ||||| ||||||| |
Sbjct: 1464118 atcgctcatcctgtttcagtcaaaatccggttgctgtaaggatagaggttgtctgtgacg 1464177
Query: 659 agtgtccagctggtggtgttgg 680
| ||||||||||||||||||||
Sbjct: 1464178 attgtccagctggtggtgttgg 1464199
Score = 77.8 bits (39), Expect = 1e-011
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 463 aaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 1486638 aaccatgccggagctggtgggatatgggcggagcttgtcagtaacagaggt 1486688
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 708 gaacatagaagatgggaaggcctacaatctcgttatgtatgttcagtccccagaaacaaa 767
||||||||||||||| ||| ||||||| | || ||||||||| | || ||||||||
Sbjct: 1456849 gaacatagaagatggaaagatctacaatttagtgatgtatgttaaatcaccagaaactgt 1456908
Query: 768 ggatctaacagtttcattaacaagctctgatgggttgcaaaacttggcttcagctac 824
||| | |||||||| |||||||| |||||||||| |||||| ||||||||| ||||
Sbjct: 1456909 ggagttgacagtttccttaacaagttctgatgggtcgcaaaatttggcttcaactac 1456965
Score = 73.8 bits (37), Expect = 2e-010
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 373 acccagacagcagccctcaaggttgatgcctcgccacagcttgcccggaagatccctgaa 432
|||||||| || | |||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 1455734 acccagactgcggtcctcaaggttgatgcctcaccgcaacttgctcgacagatccctgac 1455793
Query: 433 acactgtttgggatattttttgagg 457
||||| ||||| |||||||||||||
Sbjct: 1455794 acactatttggaatattttttgagg 1455818
Score = 71.9 bits (36), Expect = 8e-010
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 541 tcaaacatcgacccgtggtccatcattggagatgactcctccgtgtttgtggcgactgat 600
||||| || ||||| ||||| |||||||||||||| ||||| | | || ||||||||
Sbjct: 1487366 tcaaatattgacccatggtctatcattggagatgaatcctctatatacgtcacgactgat 1487425
Query: 601 cgtacatcatgtttcagtcgaaacattgttgctctgaggatggaggtcctctgtgatgag 660
| |||| |||||| | | ||| ||||||||||| ||||||||| | ||||||||| |
Sbjct: 1487426 tgctcatcttgtttccgccaaaatattgttgctctaaggatggagattctctgtgataat 1487485
Query: 661 tgtccagctggtggtgttggtgtttataacccaggtttttggggcatg 708
|||||||| || ||||| || |||| |||||||| || |||||||||
Sbjct: 1487486 tgtccagccggcggtgtcggcatttacaacccaggattctggggcatg 1487533
Score = 69.9 bits (35), Expect = 3e-009
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggcagagcttgtcagtaacagaggt 513
|||| |||||||||||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 1455995 aggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt 1456053
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 935 tttggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 1488199 tttggtttgatcaagtgtcactcatgccttcagacacatacaagg 1488243
Score = 46.1 bits (23), Expect = 0.044
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 937 tggcttgatcaagtatcactcatgcctgaagacacatacaagg 979
||||||||||| || |||||||||||| ||| ||||||||||
Sbjct: 1464937 tggcttgatcaggtgtcactcatgccttcagaaacatacaagg 1464979
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,656,659
Number of Sequences: 438736
Number of extensions: 1656659
Number of successful extensions: 8253
Number of sequences better than 0.5: 96
Number of HSP's better than 0.5 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7490
Number of HSP's gapped (non-prelim): 702
length of query: 1192
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1171
effective length of database: 2,791,206,460
effective search space: 3268502764660
effective search space used: 3268502764660
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)