BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738955.2.1
(1271 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|NM_190380.1| Oryza sativa (japonica cultivar-group), p... 936 0.0
dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA... 928 0.0
gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group)... 916 0.0
dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA... 837 0.0
dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA... 837 0.0
ref|XM_475418.1| Oryza sativa (japonica cultivar-group), p... 835 0.0
gb|AACV01002595.1| Oryza sativa (japonica cultivar-group) c... 444 e-122
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 444 e-122
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 444 e-122
dbj|AP003348.3| Oryza sativa (japonica cultivar-group) geno... 444 e-122
dbj|AP003230.4| Oryza sativa (japonica cultivar-group) geno... 444 e-122
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 444 e-122
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 444 e-122
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 444 e-122
gb|CV730571.1|CV730571 FLO--04-C21.b1 Rice flower lambda ph... 426 e-116
gb|C25149.1|C25149 C25149 Rice shoot Oryza sativa (japonica... 414 e-113
gb|AC144737.2| Oryza sativa (japonica cultivar-group) chrom... 394 e-107
gb|AACV01012416.1| Oryza sativa (japonica cultivar-group) c... 394 e-107
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 394 e-107
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 394 e-107
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 394 e-107
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 394 e-107
gb|C72427.1|C72427 C72427 Rice panicle at flowering stage O... 339 2e-090
gb|BE039217.1|BE039217 OA01E03 OA Oryza sativa (japonica cu... 303 1e-079
gb|D41419.1|D41419 RICS3911A Rice shoot Oryza sativa (japon... 301 5e-079
gb|D41260.1|D41260 RICS3629A Rice shoot Oryza sativa (japon... 287 7e-075
gb|AU081601.1|AU081601 AU081601 Rice shoot Oryza sativa (ja... 287 7e-075
gb|D40432.1|D40432 RICS2408A Rice shoot Oryza sativa (japon... 278 7e-072
gb|D39423.1|D39423 RICS0736A Rice shoot Oryza sativa (japon... 270 2e-069
gb|D41913.1|D41913 RICS4917A Rice shoot Oryza sativa (japon... 258 7e-066
gb|D24200.1|D24200 RICR1518A Rice root Oryza sativa (japoni... 258 7e-066
gb|D49095.1|D49095 RICS15755A Rice green shoot Oryza sativa... 250 2e-063
gb|AU078738.1|AU078738 AU078738 Rice shoot Oryza sativa (ja... 222 4e-055
gb|CB645779.1|CB645779 OSJNEb07L24.f OSJNEb Oryza sativa (j... 218 6e-054
dbj|AK073572.1| Oryza sativa (japonica cultivar-group) cDNA... 218 6e-054
ref|XM_467754.1| Oryza sativa (japonica cultivar-group), mRNA 218 6e-054
ref|XM_506968.1| PREDICTED Oryza sativa (japonica cultivar-... 218 6e-054
ref|XM_493787.1| Oryza sativa (japonica cultivar-group), Oz... 216 2e-053
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 216 2e-053
dbj|AP000837.1| Oryza sativa (japonica cultivar-group) geno... 216 2e-053
gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha... 216 2e-053
dbj|AK107334.1| Oryza sativa (japonica cultivar-group) cDNA... 210 1e-051
gb|AACV01000668.1| Oryza sativa (japonica cultivar-group) c... 202 3e-049
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 202 3e-049
gb|D47507.1|D47507 RICS13050A Rice green shoot Oryza sativa... 200 1e-048
gb|D40027.1|D40027 RICS1746A Rice shoot Oryza sativa (japon... 178 5e-042
ref|XM_470717.1| Oryza sativa (japonica cultivar-group), mRNA 178 5e-042
gb|DQ061062.1| Oryza sativa (japonica cultivar-group) alpha... 178 5e-042
dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA... 174 8e-041
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 168 5e-039
gb|AC125496.3| Oryza sativa (japonica cultivar-group) chrom... 168 5e-039
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 168 5e-039
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 168 5e-039
gb|AU078708.1|AU078708 AU078708 Rice cDNA from immature lea... 167 2e-038
gb|AU078709.1|AU078709 AU078709 Rice cDNA from immature lea... 165 7e-038
dbj|AK101784.1| Oryza sativa (japonica cultivar-group) cDNA... 165 7e-038
dbj|AK119215.1| Oryza sativa (japonica cultivar-group) cDNA... 165 7e-038
ref|NM_185168.1| Oryza sativa (japonica cultivar-group), mRNA 165 7e-038
dbj|AK070133.1| Oryza sativa (japonica cultivar-group) cDNA... 163 3e-037
gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 gen... 163 3e-037
dbj|AP003769.3| Oryza sativa (japonica cultivar-group) geno... 163 3e-037
gb|AACV01014938.1| Oryza sativa (japonica cultivar-group) c... 163 3e-037
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 163 3e-037
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 163 3e-037
gb|DQ061068.1| Oryza sativa (japonica cultivar-group) alpha... 163 3e-037
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 163 3e-037
gb|C73835.1|C73835 C73835 Rice panicle (longer than 10cm) O... 151 1e-033
gb|AACV01005399.1| Oryza sativa (japonica cultivar-group) c... 147 2e-032
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 147 2e-032
dbj|AP004114.3| Oryza sativa (japonica cultivar-group) geno... 147 2e-032
dbj|AP005297.3| Oryza sativa (japonica cultivar-group) geno... 147 2e-032
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 147 2e-032
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 147 2e-032
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 147 2e-032
gb|AACV01006557.1| Oryza sativa (japonica cultivar-group) c... 145 7e-032
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 145 7e-032
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 145 7e-032
dbj|AP004128.1| Oryza sativa (japonica cultivar-group) chro... 143 3e-031
gb|AACV01003829.1| Oryza sativa (japonica cultivar-group) c... 143 3e-031
dbj|AP005428.2| Oryza sativa (japonica cultivar-group) geno... 143 3e-031
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 143 3e-031
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 143 3e-031
gb|DQ061055.1| Oryza sativa (japonica cultivar-group) alpha... 143 3e-031
gb|AACV01003830.1| Oryza sativa (japonica cultivar-group) c... 141 1e-030
gb|DQ061057.1| Oryza sativa (japonica cultivar-group) alpha... 139 4e-030
gb|DQ061066.1| Oryza sativa (japonica cultivar-group) alpha... 139 4e-030
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 135 7e-029
gb|AACV01008182.1| Oryza sativa (japonica cultivar-group) c... 135 7e-029
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 135 7e-029
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 135 7e-029
gb|DQ061065.1| Oryza sativa (japonica cultivar-group) alpha... 135 7e-029
gb|CB645780.1|CB645780 OSJNEb07L24.r OSJNEb Oryza sativa (j... 131 1e-027
gb|C91662.1|C91662 C91662 Rice panicle shorter than 3cm Ory... 129 4e-027
gb|AC133338.2| Oryza sativa (japonica cultivar-group) chrom... 127 2e-026
gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 ... 127 2e-026
gb|AACV01003833.1| Oryza sativa (japonica cultivar-group) c... 127 2e-026
gb|AACV01006741.1| Oryza sativa (japonica cultivar-group) c... 127 2e-026
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 127 2e-026
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 127 2e-026
gb|DQ061063.1| Oryza sativa (japonica cultivar-group) alpha... 127 2e-026
gb|C91750.2|C91750 C91750 Rice panicle shorter than 3cm Ory... 123 2e-025
gb|AC105730.2| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
gb|AC134233.3| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
gb|AACV01005896.1| Oryza sativa (japonica cultivar-group) c... 123 2e-025
gb|AACV01009919.1| Oryza sativa (japonica cultivar-group) c... 123 2e-025
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 123 2e-025
ref|NM_188792.1| Oryza sativa (japonica cultivar-group), p... 123 2e-025
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 123 2e-025
gb|DQ061054.1| Oryza sativa (japonica cultivar-group) alpha... 123 2e-025
gb|DQ061056.1| Oryza sativa (japonica cultivar-group) alpha... 123 2e-025
gb|DQ061060.1| Oryza sativa (japonica cultivar-group) alpha... 117 2e-023
gb|C91713.1|C91713 C91713 Rice panicle shorter than 3cm Ory... 115 6e-023
dbj|AK070505.1| Oryza sativa (japonica cultivar-group) cDNA... 111 9e-022
gb|AC087550.3| Oryza sativa (japonica cultivar-group) chrom... 111 9e-022
gb|AACV01021633.1| Oryza sativa (japonica cultivar-group) c... 111 9e-022
ref|NM_196686.1| Oryza sativa (japonica cultivar-group) put... 111 9e-022
ref|NM_196687.1| Oryza sativa (japonica cultivar-group) put... 111 9e-022
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 111 9e-022
ref|XM_483792.1| Oryza sativa (japonica cultivar-group), mRNA 111 9e-022
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 111 9e-022
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 111 9e-022
gb|DQ061067.1| Oryza sativa (japonica cultivar-group) alpha... 111 9e-022
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 111 9e-022
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 111 9e-022
gb|CG408353.1|CG408353 Ds43 Ds insertion lines Oryza sativa... 109 4e-021
gb|AU222840.1|AU222840 AU222840 Rice shoot Oryza sativa (ja... 109 4e-021
gb|CA755804.1|CA755804 BR030028000_PLATE_G10_79_083.ab1 OA ... 109 4e-021
emb|Y07782.1|OSEXPANSI Oryza sativa expansin (Os-EXP-1) mRN... 109 4e-021
dbj|AK069548.1| Oryza sativa (japonica cultivar-group) cDNA... 109 4e-021
gb|AACV01003831.1| Oryza sativa (japonica cultivar-group) c... 109 4e-021
ref|XM_474982.1| Oryza sativa (japonica cultivar-group), p... 109 4e-021
gb|DQ061064.1| Oryza sativa (japonica cultivar-group) alpha... 109 4e-021
gb|D41768.1|D41768 RICS4567A Rice shoot Oryza sativa (japon... 107 1e-020
dbj|AK111100.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
ref|NM_188790.1| Oryza sativa (japonica cultivar-group), p... 107 1e-020
gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic seque... 105 6e-020
gb|AACV01000580.1| Oryza sativa (japonica cultivar-group) c... 105 6e-020
dbj|AP002865.1| Oryza sativa (japonica cultivar-group) geno... 105 6e-020
gb|AU078739.1|AU078739 AU078739 Rice shoot Oryza sativa (ja... 103 2e-019
gb|AACV01008335.1| Oryza sativa (japonica cultivar-group) c... 103 2e-019
ref|NT_107205.1| Oryza sativa (japonica cultivar-group) 103 2e-019
gb|CH401180.1| Oryza sativa (japonica cultivar-group) chrom... 103 2e-019
emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromoso... 103 2e-019
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 103 2e-019
gb|D42004.1|D42004 RICS5074A Rice shoot Oryza sativa (japon... 101 9e-019
gb|AU078731.1|AU078731 AU078731 Rice shoot Oryza sativa (ja... 101 9e-019
gb|DQ061061.1| Oryza sativa (japonica cultivar-group) alpha... 101 9e-019
gb|D39413.1|D39413 RICS0721A Rice shoot Oryza sativa (japon... 100 4e-018
gb|AU030502.1|AU030502 AU030502 Rice cDNA from immature lea... 98 1e-017
gb|D40668.1|D40668 RICS2770A Rice shoot Oryza sativa (japon... 96 6e-017
gb|C25440.2|C25440 C25440 Rice shoot Oryza sativa (japonica... 96 6e-017
dbj|AK111273.1| Oryza sativa (japonica cultivar-group) cDNA... 96 6e-017
gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 ... 96 6e-017
ref|XM_468791.1| Oryza sativa (japonica cultivar-group), mRNA 96 6e-017
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 96 6e-017
dbj|AB033663.1| Oryza sativa (japonica cultivar-group) DNA,... 94 2e-016
dbj|AP007206.1| Oryza sativa (japonica cultivar-group) chro... 94 2e-016
gb|AACV01019807.1| Oryza sativa (japonica cultivar-group) c... 94 2e-016
dbj|AP000616.2| Oryza sativa (japonica cultivar-group) geno... 94 2e-016
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 94 2e-016
ref|NM_185356.1| Oryza sativa (japonica cultivar-group), mRNA 94 2e-016
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|DQ061058.1| Oryza sativa (japonica cultivar-group) alpha... 94 2e-016
gb|D41909.1|D41909 RICS4906A Rice shoot Oryza sativa (japon... 90 3e-015
gb|AU031005.1|AU031005 AU031005 Rice cDNA from immature lea... 90 3e-015
gb|AU081609.1|AU081609 AU081609 Rice shoot Oryza sativa (ja... 88 1e-014
gb|D41340.1|D41340 RICS3803A Rice shoot Oryza sativa (japon... 86 5e-014
gb|CV723142.1|CV723142 root--02-K01.g1 Rice root lambda pha... 86 5e-014
dbj|AK060313.1| Oryza sativa (japonica cultivar-group) cDNA... 86 5e-014
gb|AC130731.2| Oryza sativa (japonica cultivar-group) chrom... 86 5e-014
gb|AC145273.2| Oryza sativa (japonica cultivar-group) chrom... 86 5e-014
gb|AACV01006963.1| Oryza sativa (japonica cultivar-group) c... 86 5e-014
gb|AACV01011538.1| Oryza sativa (japonica cultivar-group) c... 86 5e-014
ref|NT_107229.1| Oryza sativa (japonica cultivar-group) 86 5e-014
gb|CH401200.1| Oryza sativa (japonica cultivar-group) chrom... 86 5e-014
gb|DQ061059.1| Oryza sativa (japonica cultivar-group) alpha... 86 5e-014
gb|AU078737.1|AU078737 AU078737 Rice shoot Oryza sativa (ja... 84 2e-013
gb|AU081604.1|AU081604 AU081604 Rice shoot Oryza sativa (ja... 84 2e-013
gb|AU081607.1|AU081607 AU081607 Rice shoot Oryza sativa (ja... 84 2e-013
gb|AU223012.1|AU223012 AU223012 Rice shoot Oryza sativa (ja... 84 2e-013
dbj|AP004587.3| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
dbj|AP005544.3| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
gb|AACV01005898.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
gb|AACV01018997.1| Oryza sativa (japonica cultivar-group) c... 84 2e-013
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 84 2e-013
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 84 2e-013
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 84 2e-013
gb|AACV01005899.1| Oryza sativa (japonica cultivar-group) c... 82 8e-013
gb|AU222903.1|AU222903 AU222903 Rice shoot Oryza sativa (ja... 80 3e-012
ref|NM_197539.1| Oryza sativa (japonica cultivar-group) put... 80 3e-012
dbj|AK063455.1| Oryza sativa (japonica cultivar-group) cDNA... 78 1e-011
gb|U30479.1|OSU30479 Oryza sativa (japonica cultivar-group)... 78 1e-011
gb|AACV01011535.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
gb|AU030503.1|AU030503 AU030503 Rice cDNA from immature lea... 76 5e-011
gb|D39861.1|D39861 RICS1496A Rice shoot Oryza sativa (japon... 74 2e-010
gb|D23861.1|D23861 RICR0448A Rice root Oryza sativa (japoni... 74 2e-010
gb|D40812.1|D40812 RICS2968A Rice shoot Oryza sativa (japon... 72 8e-010
gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05... 66 5e-008
gb|AACV01021998.1| Oryza sativa (japonica cultivar-group) c... 66 5e-008
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 66 5e-008
gb|AACV01005900.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|D40257.1|D40257 RICS2106A Rice shoot Oryza sativa (japon... 62 8e-007
dbj|AK062225.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
dbj|AK066414.1| Oryza sativa (japonica cultivar-group) cDNA... 56 5e-005
gb|AACV01010380.1| Oryza sativa (japonica cultivar-group) c... 56 5e-005
ref|XM_473658.1| Oryza sativa (japonica cultivar-group), p... 56 5e-005
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 56 5e-005
emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromoso... 56 5e-005
dbj|AP003938.1| Oryza sativa (japonica cultivar-group) chro... 54 2e-004
dbj|AK101940.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP003539.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01014579.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AU029532.1|AU029532 AU029532 Rice panicle shorter than 3... 50 0.003
gb|AU058086.1|AU058086 AU058086 Rice etiolated shoot Oryza ... 50 0.003
gb|AU078735.1|AU078735 AU078735 Rice shoot Oryza sativa (ja... 50 0.003
gb|AU172681.1|AU172681 AU172681 Rice panicle at flowering s... 50 0.003
gb|AU182290.1|AU182290 AU182290 Rice panicle at flowering s... 50 0.003
gb|AU182573.1|AU182573 AU182573 Rice panicle at flowering s... 50 0.003
gb|AU184186.1|AU184186 AU184186 Rice root Oryza sativa (jap... 50 0.003
gb|AU222764.1|AU222764 AU222764 Rice shoot Oryza sativa (ja... 50 0.003
gb|AU222910.1|AU222910 AU222910 Rice shoot Oryza sativa (ja... 50 0.003
gb|AU223094.1|AU223094 AU223094 Rice shoot Oryza sativa (ja... 50 0.003
dbj|AK071328.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC O... 50 0.003
gb|AY100692.1| Oryza sativa (japonica cultivar-group) alpha... 50 0.003
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 50 0.003
gb|AACV01025196.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|D41565.1|D41565 RICS4140A Rice shoot Oryza sativa (japon... 48 0.012
gb|AU223257.1|AU223257 AU223257 Rice shoot Oryza sativa (ja... 48 0.012
gb|C91869.1|C91869 C91869 Rice panicle shorter than 3cm Ory... 46 0.047
gb|BU099220.1|BU099220 S234-XG1 Rice cold stress germinatio... 46 0.047
gb|CA998047.1|CA998047 S234X_G01 Rice cold stress germinati... 46 0.047
gb|AY427571.1| Oryza sativa (japonica cultivar-group) seed ... 46 0.047
gb|AACV01014937.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
>ref|NM_190380.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 756
Score = 936 bits (472), Expect = 0.0
Identities = 680/747 (91%), Gaps = 8/747 (1%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 754 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 695
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 694 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 635
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 575
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 574 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 515
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 455
Query: 749 ccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccg 808
|||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 454 cccttctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccg 395
Query: 809 gctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgggga 868
||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 394 gctcggccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttgggga 335
Query: 869 ggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacg 928
| ||||||| |||||||| | ||||||||| |||||||||| | ||||||||||||||
Sbjct: 334 gcgcgtagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcacc 275
Query: 929 actgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttga 988
||||||| | ||||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 274 actgcccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttga 215
Query: 989 acagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgt 1048
||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct: 214 acagcaccgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccat 155
Query: 1049 agccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtggg 1108
| || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 154 acccacacgccccgcccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtggg 95
Query: 1109 cgctctgccacgagccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggct 1167
|||||||||| |||||||||||| || |||| |||| |||| ||| ||||||||||
Sbjct: 94 cgctctgccaggagccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggcc 39
Query: 1168 gagcagagcaggaggagcagggcacta 1194
||| || ||||||||||||||||||
Sbjct: 38 gagaag---aggaggagcagggcacta 15
>dbj|AK070463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M24, full
insert sequence
Length = 1341
Score = 928 bits (468), Expect = 0.0
Identities = 679/747 (90%), Gaps = 8/747 (1%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 851 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 792
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 791 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 732
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 672
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || | ||
Sbjct: 671 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaatca 612
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 552
Query: 749 ccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccg 808
|||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 551 cccttctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccg 492
Query: 809 gctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgggga 868
||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 491 gctcggccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttgggga 432
Query: 869 ggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacg 928
| ||||||| |||||||| | ||||||||| |||||||||| | ||||||||||||||
Sbjct: 431 gcgcgtagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcacc 372
Query: 929 actgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttga 988
||||||| | ||||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 371 actgcccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttga 312
Query: 989 acagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgt 1048
||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct: 311 acagcaccgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccat 252
Query: 1049 agccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtggg 1108
| || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 251 acccacacgccccgcccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtggg 192
Query: 1109 cgctctgccacgagccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggct 1167
|||||||||| |||||||||||| || |||| |||| |||| ||| ||||||||||
Sbjct: 191 cgctctgccaggagccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggcc 136
Query: 1168 gagcagagcaggaggagcagggcacta 1194
||| || ||||||||||||||||||
Sbjct: 135 gagaag---aggaggagcagggcacta 112
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 1014 gcctaagcgggtgctaattaataagcagcctcagaat 978
>gb|U30477.1|OSU30477 Oryza sativa (japonica cultivar-group) expansin Os-EXPA2 (Os-EXPA2)
mRNA, complete cds
Length = 1323
Score = 916 bits (462), Expect = 0.0
Identities = 677/747 (90%), Gaps = 8/747 (1%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| |||||
Sbjct: 836 agaactggccgccctcgaaggtctggncgaactgccagccggccggcacgacgttgttgc 777
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 776 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 717
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 657
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | ||||||||||||||||| || ||||
Sbjct: 656 accccttgatcgacacggactgcacgtcgcctggnccggccacgttggtcacaagaacca 597
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 537
Query: 749 ccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccg 808
|||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 536 cccttctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccg 477
Query: 809 gctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgggga 868
||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 476 gctcggccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttgggga 417
Query: 869 ggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacg 928
| ||||||| |||||||| | ||||||||| |||||||||| | ||||||||||||||
Sbjct: 416 gcgcgtagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcacc 357
Query: 929 actgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttga 988
||||||| | ||||||||| |||||||||||||| |||| |||||| |||||||||||||
Sbjct: 356 actgcccatcgttgtcgcaccgcagctcgtagcacgaccggcacgccgcgccgtcgttga 297
Query: 989 acagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgt 1048
||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct: 296 acagcaccgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccat 237
Query: 1049 agccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtggg 1108
| || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 236 acccacacgccccgcccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtggg 177
Query: 1109 cgctctgccacgagccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggct 1167
|||||||||| |||||||||||| || |||| |||| |||| ||| ||||||||||
Sbjct: 176 cgctctgccaggagccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggcc 121
Query: 1168 gagcagagcaggaggagcagggcacta 1194
||| || ||||||||||||||||||
Sbjct: 120 gagaag---aggaggagcagggcacta 97
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 999 gcctaagcgggtgctaattaataagcagcctcagaat 963
>dbj|AK100179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029P10, full
insert sequence
Length = 1311
Score = 837 bits (422), Expect = 0.0
Identities = 611/674 (90%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 805 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 746
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 745 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 686
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 685 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 626
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 625 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 566
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 565 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 506
Query: 746 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 805
||||||| | | ||| |||||| |||||||||||||||||||| ||||| |||||||| |
Sbjct: 505 gcaccctgcggaaggagacggggacgatgccggcgcggtactgggcgatgtggaggaatg 446
Query: 806 ccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 865
|||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 445 ccggctcggccatgtcgaagtgagggcggggcgggttgcaccagccgccgtcgtcgctgg 386
Query: 866 ggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggc 925
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 385 ggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggagcccggcaggc 326
Query: 926 acgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgt 985
|||| |||| ||||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct: 325 acgaactcccggcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgt 266
Query: 986 tgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcc 1045
||||||||||||||||||||||||| ||||| ||||| ||||| |||||||| ||| |
Sbjct: 265 tgaacagcgccgtgctcagcgccgcggtgttcgtgccatacccttggctgtacaggttgc 206
Query: 1046 cgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgt 1105
|||| ||||| || |||||||| ||||| || || |||||||||||||||||||||||||
Sbjct: 205 cgtaaccgcaagccccgcccatggtgccggaagcatcgccgccgccgtagaacgtggcgt 146
Query: 1106 gggcgctctgccac 1119
||||||||||||||
Sbjct: 145 gggcgctctgccac 132
>dbj|AK105988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G10, full
insert sequence
Length = 2440
Score = 837 bits (422), Expect = 0.0
Identities = 611/674 (90%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 804 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 745
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 744 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 685
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 684 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 625
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 624 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 565
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 564 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 505
Query: 746 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 805
||||||| | | ||| |||||| |||||||||||||||||||| ||||| |||||||| |
Sbjct: 504 gcaccctgcggaaggagacggggacgatgccggcgcggtactgggcgatgtggaggaatg 445
Query: 806 ccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctgg 865
|||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 444 ccggctcggccatgtcgaagtgagggcggggcgggttgcaccagccgccgtcgtcgctgg 385
Query: 866 ggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggc 925
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 384 ggaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggagcccggcaggc 325
Query: 926 acgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgt 985
|||| |||| ||||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct: 324 acgaactcccggcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgt 265
Query: 986 tgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcc 1045
||||||||||||||||||||||||| ||||| ||||| ||||| |||||||| ||| |
Sbjct: 264 tgaacagcgccgtgctcagcgccgcggtgttcgtgccatacccttggctgtacaggttgc 205
Query: 1046 cgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgt 1105
|||| ||||| || |||||||| ||||| || || |||||||||||||||||||||||||
Sbjct: 204 cgtaaccgcaagccccgcccatggtgccggaagcatcgccgccgccgtagaacgtggcgt 145
Query: 1106 gggcgctctgccac 1119
||||||||||||||
Sbjct: 144 gggcgctctgccac 131
>ref|XM_475418.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 741
Score = 835 bits (421), Expect = 0.0
Identities = 610/673 (90%)
Strand = Plus / Minus
Query: 447 ctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgtt 506
|||||||||| | ||||||||||||||||||||||||||||| | | |||||| |||
Sbjct: 741 ctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgtt 682
Query: 507 gctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgag 566
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 gctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcgag 622
Query: 567 gagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgct 626
|| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 621 gaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgcg 562
Query: 627 ggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcac 686
|| ||||||||||| ||||| | ||||| |||||||||||||||||||||||||||||
Sbjct: 561 cgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagcac 502
Query: 687 caggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacgg 746
|||||||||||||||||| ||||| | ||||||||||| ||| |||||||||||||||||
Sbjct: 501 caggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacgg 442
Query: 747 caccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggc 806
|||||| | | ||| |||||| |||||||||||||||||||| ||||| |||||||| ||
Sbjct: 441 caccctgcggaaggagacggggacgatgccggcgcggtactgggcgatgtggaggaatgc 382
Query: 807 cggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggg 866
||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 cggctcggccatgtcgaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggg 322
Query: 867 gaggccgtagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggca 926
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 321 gaggccgtagttgggcgggcagaagttggtggccgtcacggtgatggagcccggcaggca 262
Query: 927 cgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgtt 986
||| |||| ||||||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 261 cgaactcccggcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgtt 202
Query: 987 gaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttccc 1046
|||||||||||||||||||||||| ||||| ||||| ||||| |||||||| ||| ||
Sbjct: 201 gaacagcgccgtgctcagcgccgcggtgttcgtgccatacccttggctgtacaggttgcc 142
Query: 1047 gtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtg 1106
||| ||||| || |||||||| ||||| || || ||||||||||||||||||||||||||
Sbjct: 141 gtaaccgcaagccccgcccatggtgccggaagcatcgccgccgccgtagaacgtggcgtg 82
Query: 1107 ggcgctctgccac 1119
|||||||||||||
Sbjct: 81 ggcgctctgccac 69
>gb|AACV01002595.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002595, whole
genome shotgun sequence
Length = 39811
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Plus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 9503 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 9562
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 9563 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 9622
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9623 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 9682
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 9683 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 9742
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9743 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 9802
Query: 749 ccct 752
||||
Sbjct: 9803 ccct 9806
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Plus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 10169 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 10228
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 10229 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 10288
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 10289 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 10348
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 10349 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 10408
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 10409 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 10468
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 10469 cacgccccgcc 10479
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 10585 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 10644
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 10645 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 10697
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 10698 gagcagggcacta 10710
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 9340 gcctaagcgggtgctaattaataagcagcctcagaat 9376
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 35220762 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 35220703
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 35220702 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 35220643
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35220642 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 35220583
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 35220582 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 35220523
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35220522 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 35220463
Query: 749 ccct 752
||||
Sbjct: 35220462 ccct 35220459
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 35220096 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 35220037
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 35220036 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 35219977
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 35219976 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 35219917
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 35219916 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 35219857
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 35219856 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 35219797
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 35219796 cacgccccgcc 35219786
Score = 216 bits (109), Expect = 2e-053
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 9523619 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 9523560
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 9523559 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 9523500
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 9523499 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 9523440
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 9523439 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 9523380
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 9523379 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 9523320
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 9523319 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 9523260
Query: 870 gccgtagttgggcgggcagaagttggtggccgt 902
|||||||||||||||||| ||||||||||||
Sbjct: 9523259 cgcgtagttgggcgggcagaggttggtggccgt 9523227
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 9523153 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 9523094
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 9523093 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 9523034
Query: 1099 gt 1100
||
Sbjct: 9523033 gt 9523032
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 35219680 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 35219621
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 35219620 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 35219568
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 35219567 gagcagggcacta 35219555
Score = 105 bits (53), Expect = 6e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| ||||||||||||||||||| |||||| |||||| |
Sbjct: 8193357 gccggctgcgacatgtcgaagtggcggcgcggcgggttgcaccacccgccggcgtcgccg 8193416
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| ||| ||||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 8193417 gacagggcgtagtttggagggcagaagttggtcgccgtcacggtgatgg 8193465
Score = 79.8 bits (40), Expect = 3e-012
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| | ||||||||||||||||| |||||| |||||| |
Sbjct: 8199071 gccggctgcgacatgtcgaagtggcgccgcggcgggttgcaccacccgccggcgtcgccg 8199130
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggt 908
| || |||||||||||||||| ||||||| ||||| |||||
Sbjct: 8199131 gactcgctgtagttgggcgggcagtagttggtcgccgtcacggt 8199174
Score = 77.8 bits (39), Expect = 1e-011
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtac 1026
||||||| ||||||||| | ||||||||| ||||||||||| |||||| || ||||||
Sbjct: 8199239 ccgcacgacgcgccgtcgccgtacagcgccgagctcagcgccgtcgtgttcgtcccgtac 8199298
Query: 1027 cccgtgctgtacatgttcccgtagccgcacg 1057
|| | |||||||||||| ||||| |||||||
Sbjct: 8199299 ccggcgctgtacatgttgccgtacccgcacg 8199329
Score = 69.9 bits (35), Expect = 3e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgt 1013
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8193525 ccgcacgacgcgccgccgttgaacagcgccgtgctcagcgccgccgt 8193571
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcg 1104
||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 8199433 cccatggtgccggacgcgtcgctgccgccgtagaacgtggcg 8199474
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagttgcgg 603
||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 8193111 ccgtcgaggcgcgcgttgctctgccagttcgcgccccagttgcgg 8193155
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 35220925 gcctaagcgggtgctaattaataagcagcctcagaat 35220889
Score = 44.1 bits (22), Expect = 0.18
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgt 1100
||||| ||||| || ||||||| |||||||||||||||
Sbjct: 8193742 cccatggtgccggaggcgtcgctgccgccgtagaacgt 8193779
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 9668145 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 9668086
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 9668085 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 9668026
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9668025 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 9667966
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 9667965 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 9667906
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9667905 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 9667846
Query: 749 ccct 752
||||
Sbjct: 9667845 ccct 9667842
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 9667479 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 9667420
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 9667419 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 9667360
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 9667359 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 9667300
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 9667299 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 9667240
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 9667239 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 9667180
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 9667179 cacgccccgcc 9667169
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9667063 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 9667004
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 9667003 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 9666951
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 9666950 gagcagggcacta 9666938
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 9668308 gcctaagcgggtgctaattaataagcagcctcagaat 9668272
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0485B12
Length = 156047
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 147242 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 147183
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 147182 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 147123
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147122 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 147063
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 147062 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 147003
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147002 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 146943
Query: 749 ccct 752
||||
Sbjct: 146942 ccct 146939
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 146576 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 146517
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 146516 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 146457
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 146456 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 146397
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 146396 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 146337
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 146336 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 146277
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 146276 cacgccccgcc 146266
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 146160 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 146101
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 146100 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 146048
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 146047 gagcagggcacta 146035
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 147405 gcctaagcgggtgctaattaataagcagcctcagaat 147369
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0031D02
Length = 183692
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 19176 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 19117
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 19116 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 19057
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19056 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 18997
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 18996 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 18937
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18936 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 18877
Query: 749 ccct 752
||||
Sbjct: 18876 ccct 18873
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 18510 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 18451
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 18450 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 18391
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 18390 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 18331
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 18330 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 18271
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 18270 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 18211
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 18210 cacgccccgcc 18200
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 18094 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 18035
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 18034 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 17982
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 17981 gagcagggcacta 17969
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 19339 gcctaagcgggtgctaattaataagcagcctcagaat 19303
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 9436191 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 9436132
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 9436131 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 9436072
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9436071 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 9436012
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 9436011 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 9435952
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9435951 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 9435892
Query: 749 ccct 752
||||
Sbjct: 9435891 ccct 9435888
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 9435525 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 9435466
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 9435465 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 9435406
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 9435405 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 9435346
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 9435345 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 9435286
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 9435285 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 9435226
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 9435225 cacgccccgcc 9435215
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 9435109 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 9435050
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 9435049 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 9434997
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 9434996 gagcagggcacta 9434984
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 9436354 gcctaagcgggtgctaattaataagcagcctcagaat 9436318
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 34637912 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 34637853
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 34637852 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 34637793
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34637792 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 34637733
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 34637732 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 34637673
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34637672 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 34637613
Query: 749 ccct 752
||||
Sbjct: 34637612 ccct 34637609
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 34637246 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 34637187
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 34637186 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 34637127
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 34637126 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 34637067
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 34637066 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 34637007
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 34637006 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 34636947
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 34636946 cacgccccgcc 34636936
Score = 202 bits (102), Expect = 3e-049
Identities = 322/394 (81%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 9573333 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 9573274
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 9573273 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 9573214
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 9573213 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 9573154
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 9573153 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 9573094
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 9573093 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 9573034
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 9573033 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 9572974
Query: 870 gccgtagttgggc-gggcagaagttggtggccgt 902
||||||||||| ||||||| ||||||||||||
Sbjct: 9572973 cgcgtagttgggcggggcagaggttggtggccgt 9572940
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 9572866 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 9572807
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 9572806 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 9572747
Query: 1099 gt 1100
||
Sbjct: 9572746 gt 9572745
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 34636830 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 34636771
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 34636770 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 34636718
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 34636717 gagcagggcacta 34636705
Score = 105 bits (53), Expect = 6e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| ||||||||||||||||||| |||||| |||||| |
Sbjct: 8243898 gccggctgcgacatgtcgaagtggcggcgcggcgggttgcaccacccgccggcgtcgccg 8243957
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| ||| ||||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 8243958 gacagggcgtagtttggagggcagaagttggtcgccgtcacggtgatgg 8244006
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| | ||||||||||||||||| |||||| |||||| |
Sbjct: 8249614 gccggctgcgacatgtcgaagtggcgccgcggcgggttgcaccacccgccggcgtcgccg 8249673
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacgg 907
| || |||||| ||||||||| ||||||| ||||| ||||
Sbjct: 8249674 gactcgctgtagtttggcgggcagtagttggtcgccgtcacgg 8249716
Score = 69.9 bits (35), Expect = 3e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgt 1013
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8244066 ccgcacgacgcgccgccgttgaacagcgccgtgctcagcgccgccgt 8244112
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcg 1104
||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 8249978 cccatggtgccggacgcgtcgctgccgccgtagaacgtggcg 8250019
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagttgcgg 603
||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 8243652 ccgtcgaggcgcgcgttgctctgccagttcgcgccccagttgcgg 8243696
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 34638075 gcctaagcgggtgctaattaataagcagcctcagaat 34638039
Score = 44.1 bits (22), Expect = 0.18
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgt 1100
||||| ||||| || ||||||| |||||||||||||||
Sbjct: 8244283 cccatggtgccggaggcgtcgctgccgccgtagaacgt 8244320
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 444 bits (224), Expect = e-122
Identities = 284/304 (93%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 35140092 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 35140033
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 35140032 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 35139973
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35139972 aggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 35139913
Query: 629 agcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacca 688
| |||||||| ||||||||||||||||| || | |||||||||||||||||| || ||||
Sbjct: 35139912 accccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacca 35139853
Query: 689 ggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggca 748
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35139852 ggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggca 35139793
Query: 749 ccct 752
||||
Sbjct: 35139792 ccct 35139789
Score = 387 bits (195), Expect = e-104
Identities = 282/311 (90%)
Strand = Plus / Minus
Query: 754 ctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgg 813
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 35139426 ctgtaggagacgggcacgatgccggcgcggtacacgccgatctggaggaaggccggctcg 35139367
Query: 814 gccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccg 873
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 35139366 gccatgtcgaagtgggggcgcggcgggttgcaccagccgccgtcgtcgttggggagcgcg 35139307
Query: 874 tagttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgc 933
||||| |||||||| | ||||||||| |||||||||| | |||||||||||||| |||||
Sbjct: 35139306 tagttcggcgggcacaggttggtggcggtgacggtgacgctgcccggcaggcaccactgc 35139247
Query: 934 ccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagc 993
|| | ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 35139246 ccatcgttgtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagc 35139187
Query: 994 gccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccg 1053
|||||||||||||||||||||||||||||||||| |||||||||| |||||| || ||
Sbjct: 35139186 accgtgctcagcgccgccgtgttggtgccgtacccggtgctgtacaggttcccataccca 35139127
Query: 1054 cacgcgccgcc 1064
||||| |||||
Sbjct: 35139126 cacgccccgcc 35139116
Score = 216 bits (109), Expect = 2e-053
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 9525837 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 9525778
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 9525777 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 9525718
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 9525717 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 9525658
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 9525657 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 9525598
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 9525597 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 9525538
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 9525537 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 9525478
Query: 870 gccgtagttgggcgggcagaagttggtggccgt 902
|||||||||||||||||| ||||||||||||
Sbjct: 9525477 cgcgtagttgggcgggcagaggttggtggccgt 9525445
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 9525371 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 9525312
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 9525311 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 9525252
Query: 1099 gt 1100
||
Sbjct: 9525251 gt 9525250
Score = 115 bits (58), Expect = 6e-023
Identities = 116/133 (87%), Gaps = 8/133 (6%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgag 1122
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 35139010 cccatcgtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggag 35138951
Query: 1123 ccgtagtcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggag 1181
||||||||| || |||| |||| |||| ||| |||||||||| ||| || |||||
Sbjct: 35138950 ccgtagtcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggag 35138898
Query: 1182 gagcagggcacta 1194
|||||||||||||
Sbjct: 35138897 gagcagggcacta 35138885
Score = 105 bits (53), Expect = 6e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| ||||||||||||||||||| |||||| |||||| |
Sbjct: 8195575 gccggctgcgacatgtcgaagtggcggcgcggcgggttgcaccacccgccggcgtcgccg 8195634
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| ||| ||||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 8195635 gacagggcgtagtttggagggcagaagttggtcgccgtcacggtgatgg 8195683
Score = 79.8 bits (40), Expect = 3e-012
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| | ||||||||||||||||| |||||| |||||| |
Sbjct: 8201289 gccggctgcgacatgtcgaagtggcgccgcggcgggttgcaccacccgccggcgtcgccg 8201348
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggt 908
| || |||||||||||||||| ||||||| ||||| |||||
Sbjct: 8201349 gactcgctgtagttgggcgggcagtagttggtcgccgtcacggt 8201392
Score = 77.8 bits (39), Expect = 1e-011
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtac 1026
||||||| ||||||||| | ||||||||| ||||||||||| |||||| || ||||||
Sbjct: 8201457 ccgcacgacgcgccgtcgccgtacagcgccgagctcagcgccgtcgtgttcgtcccgtac 8201516
Query: 1027 cccgtgctgtacatgttcccgtagccgcacg 1057
|| | |||||||||||| ||||| |||||||
Sbjct: 8201517 ccggcgctgtacatgttgccgtacccgcacg 8201547
Score = 69.9 bits (35), Expect = 3e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgt 1013
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8195743 ccgcacgacgcgccgccgttgaacagcgccgtgctcagcgccgccgt 8195789
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcg 1104
||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 8201651 cccatggtgccggacgcgtcgctgccgccgtagaacgtggcg 8201692
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagttgcgg 603
||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 8195329 ccgtcgaggcgcgcgttgctctgccagttcgcgccccagttgcgg 8195373
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 35140255 gcctaagcgggtgctaattaataagcagcctcagaat 35140219
Score = 44.1 bits (22), Expect = 0.18
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgt 1100
||||| ||||| || ||||||| |||||||||||||||
Sbjct: 8195960 cccatggtgccggaggcgtcgctgccgccgtagaacgt 8195997
>gb|CV730571.1|CV730571 FLO--04-C21.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-C21,
mRNA sequence
Length = 506
Score = 426 bits (215), Expect = e-116
Identities = 326/363 (89%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 364 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 305
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 304 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 245
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 244 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 185
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| |||| ||||||||||||||||||||||
Sbjct: 184 gcgaccccttgatggagacggagcggacgtcgccggaaccggccacgttggtcaccagca 125
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 124 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 65
Query: 746 gcaccctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaagg 805
||||||| | | ||| |||||| |||||||||||||||||||| ||||| |||||||| |
Sbjct: 64 gcaccctgcggaaggagacggggacgatgccggcgcggtactgggcgatgtggaggaatg 5
Query: 806 ccg 808
|||
Sbjct: 4 ccg 2
>gb|C25149.1|C25149 C25149 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5436_2A, mRNA sequence
Length = 428
Score = 414 bits (209), Expect = e-113
Identities = 282/305 (92%), Gaps = 1/305 (0%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaact-gccagcccgccggagcgacgccgttg 507
|||||||| |||||||||||||||||||||||| |||| || ||||| ||||| ||||
Sbjct: 337 agaactggccgccctcgaaggtctggccgaacttgccaaccggccggcacgacgttgttg 278
Query: 508 ctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagg 567
||||||||||||||| |||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 277 ctggtgacggtgcgggcgtcgctgacggcgacctggaaggagaggctctggccgtcgagg 218
Query: 568 agcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctg 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 taggagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctg 158
Query: 628 gagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcacc 687
|| |||||||| ||||||||||||||||| || | |||||||||||||||||| || |||
Sbjct: 157 gaccccttgatcgacacggactgcacgtcgcctgggccggccacgttggtcacaagaacc 98
Query: 688 aggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggc 747
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aggttgaagtaggagtgcccgttgatggtgaacctgatcccgcccttcttcacgcacggc 38
Query: 748 accct 752
|||||
Sbjct: 37 accct 33
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0018K15, complete sequence
Length = 168519
Score = 394 bits (199), Expect = e-107
Identities = 280/307 (91%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 37898 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 37957
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 37958 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 38017
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 38018 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 38077
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 38078 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 38137
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 38138 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 38197
Query: 746 gcaccct 752
|||||||
Sbjct: 38198 gcaccct 38204
Score = 379 bits (191), Expect = e-102
Identities = 275/303 (90%)
Strand = Plus / Plus
Query: 762 gacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtc 821
|||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||
Sbjct: 38730 gacggggacgatgccggcgcggtactgggcgatgtggaggaatgccggctcggccatgtc 38789
Query: 822 gaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 881
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38790 gaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 38849
Query: 882 cgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgtt 941
||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||
Sbjct: 38850 cgggcagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcccggcgtt 38909
Query: 942 gtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgct 1001
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 38910 gtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcgccgtgct 38969
Query: 1002 cagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgcc 1061
||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||| || ||
Sbjct: 38970 cagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgcaagcccc 39029
Query: 1062 gcc 1064
|||
Sbjct: 39030 gcc 39032
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccac 1119
||||| ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 39125 cccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctctgccac 39181
>gb|AACV01012416.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012416, whole
genome shotgun sequence
Length = 33179
Score = 394 bits (199), Expect = e-107
Identities = 280/307 (91%)
Strand = Plus / Minus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 10191 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 10132
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10131 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 10072
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 10071 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 10012
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 10011 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 9952
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 9951 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 9892
Query: 746 gcaccct 752
|||||||
Sbjct: 9891 gcaccct 9885
Score = 379 bits (191), Expect = e-102
Identities = 275/303 (90%)
Strand = Plus / Minus
Query: 762 gacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtc 821
|||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||
Sbjct: 9359 gacggggacgatgccggcgcggtactgggcgatgtggaggaatgccggctcggccatgtc 9300
Query: 822 gaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 881
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9299 gaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 9240
Query: 882 cgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgtt 941
||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||
Sbjct: 9239 cgggcagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcccggcgtt 9180
Query: 942 gtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgct 1001
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 9179 gtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcgccgtgct 9120
Query: 1002 cagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgcc 1061
||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||| || ||
Sbjct: 9119 cagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgcaagcccc 9060
Query: 1062 gcc 1064
|||
Sbjct: 9059 gcc 9057
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccac 1119
||||| ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 8964 cccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctctgccac 8908
>ref|NT_107213.1| Oryza sativa (japonica cultivar-group)
Length = 2036819
Score = 394 bits (199), Expect = e-107
Identities = 280/307 (91%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 1906198 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 1906257
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1906258 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 1906317
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 1906318 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 1906377
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 1906378 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 1906437
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 1906438 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 1906497
Query: 746 gcaccct 752
|||||||
Sbjct: 1906498 gcaccct 1906504
Score = 379 bits (191), Expect = e-102
Identities = 275/303 (90%)
Strand = Plus / Plus
Query: 762 gacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtc 821
|||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||
Sbjct: 1907030 gacggggacgatgccggcgcggtactgggcgatgtggaggaatgccggctcggccatgtc 1907089
Query: 822 gaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 881
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1907090 gaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 1907149
Query: 882 cgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgtt 941
||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||
Sbjct: 1907150 cgggcagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcccggcgtt 1907209
Query: 942 gtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgct 1001
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 1907210 gtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcgccgtgct 1907269
Query: 1002 cagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgcc 1061
||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||| || ||
Sbjct: 1907270 cagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgcaagcccc 1907329
Query: 1062 gcc 1064
|||
Sbjct: 1907330 gcc 1907332
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccac 1119
||||| ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1907425 cccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctctgccac 1907481
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 394 bits (199), Expect = e-107
Identities = 280/307 (91%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 5728366 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 5728425
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5728426 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 5728485
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 5728486 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 5728545
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 5728546 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 5728605
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 5728606 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 5728665
Query: 746 gcaccct 752
|||||||
Sbjct: 5728666 gcaccct 5728672
Score = 379 bits (191), Expect = e-102
Identities = 275/303 (90%)
Strand = Plus / Plus
Query: 762 gacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtc 821
|||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||
Sbjct: 5729198 gacggggacgatgccggcgcggtactgggcgatgtggaggaatgccggctcggccatgtc 5729257
Query: 822 gaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 881
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5729258 gaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 5729317
Query: 882 cgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgtt 941
||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||
Sbjct: 5729318 cgggcagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcccggcgtt 5729377
Query: 942 gtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgct 1001
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 5729378 gtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcgccgtgct 5729437
Query: 1002 cagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgcc 1061
||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||| || ||
Sbjct: 5729438 cagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgcaagcccc 5729497
Query: 1062 gcc 1064
|||
Sbjct: 5729498 gcc 5729500
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccac 1119
||||| ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 5729593 cccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctctgccac 5729649
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 394 bits (199), Expect = e-107
Identities = 280/307 (91%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 23028679 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 23028738
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 23028739 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 23028798
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 23028799 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 23028858
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 23028859 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 23028918
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 23028919 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 23028978
Query: 746 gcaccct 752
|||||||
Sbjct: 23028979 gcaccct 23028985
Score = 379 bits (191), Expect = e-102
Identities = 275/303 (90%)
Strand = Plus / Plus
Query: 762 gacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtc 821
|||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||
Sbjct: 23029511 gacggggacgatgccggcgcggtactgggcgatgtggaggaatgccggctcggccatgtc 23029570
Query: 822 gaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 881
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23029571 gaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 23029630
Query: 882 cgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgtt 941
||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||
Sbjct: 23029631 cgggcagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcccggcgtt 23029690
Query: 942 gtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgct 1001
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 23029691 gtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcgccgtgct 23029750
Query: 1002 cagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgcc 1061
||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||| || ||
Sbjct: 23029751 cagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgcaagcccc 23029810
Query: 1062 gcc 1064
|||
Sbjct: 23029811 gcc 23029813
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 803 aggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgc 862
|||||||||| | ||||||||||||| | ||||| ||||||||||| |||||| || ||
Sbjct: 11557536 aggccggctgtgacatgtcgaagtgctgccgcggtgggttgcaccacccgccgctgttgc 11557595
Query: 863 tggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
|||| || | |||| |||||||| |||||||||||||||| ||||||||
Sbjct: 11557596 tgggcagcgcccagttaggcgggcataagttggtggccgtgatggtgatgg 11557646
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccac 1119
||||| ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 23029906 cccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctctgccac 23029962
Score = 77.8 bits (39), Expect = 1e-011
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 803 aggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgc 862
|||||||||| | ||||||||||||| ||| |||||||||||||| |||||| ||||||
Sbjct: 11514455 aggccggctgcgacatgtcgaagtgcttgcgaggcgggttgcaccacccgccggcgtcgc 11514514
Query: 863 tggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| |||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 11514515 ttttttttgcgtagttgggcgggcacaggttggtggccgtgatggtgatgg 11514565
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 975 ggcgccgtcgttgaacagcgccgtgctcagcgccgc 1010
||||||||||||||||||||||| ||||||||||||
Sbjct: 11557717 ggcgccgtcgttgaacagcgccgagctcagcgccgc 11557752
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 975 ggcgccgtcgttgaacagcgccgtgctcagcgccgc 1010
||||||||||||||||||||||| ||||||||||||
Sbjct: 11514633 ggcgccgtcgttgaacagcgccgagctcagcgccgc 11514668
Score = 46.1 bits (23), Expect = 0.047
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagtt 599
||||||||||||||| |||||||||||
Sbjct: 11514079 gttgctctgccagttttggccccagtt 11514105
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 543 gaaggacaggctctggccgtcgaggagcgagttgctctgcca 584
||||||||||||||| ||| ||||| || ||||||||||||
Sbjct: 11556695 gaaggacaggctctgcccggcgaggtacgcgttgctctgcca 11556736
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 394 bits (199), Expect = e-107
Identities = 280/307 (91%)
Strand = Plus / Plus
Query: 446 gctagaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgt 505
||||||||||| | ||||||||||||||||||||||||||||| | | |||||| ||
Sbjct: 23352362 gctagaactggccaccctcgaaggtctggccgaactgccagccggggtgggcgacgttgt 23352421
Query: 506 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcga 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 23352422 tgctggtgacggtgcggccgtcgctggcggtgacctggaaggagaggctctggccgtcga 23352481
Query: 566 ggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgc 625
||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 23352482 ggaacgcgttgctctgccagttctggccccagttccgcgacatgggctgccacccggtgc 23352541
Query: 626 tggagcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagca 685
|| ||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 23352542 gcgaccccttgatggagacggagcggacgtcgccggcgccggccacgttggtcaccagca 23352601
Query: 686 ccaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacg 745
||||||||||||||||||| ||||| | ||||||||||| ||| ||||||||||||||||
Sbjct: 23352602 ccaggttgaagtaggagtgcccgttcacggtgaacctgaccccacccttcttcacgcacg 23352661
Query: 746 gcaccct 752
|||||||
Sbjct: 23352662 gcaccct 23352668
Score = 379 bits (191), Expect = e-102
Identities = 275/303 (90%)
Strand = Plus / Plus
Query: 762 gacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtc 821
|||||| |||||||||||||||||||| ||||| |||||||| ||||||| |||||||||
Sbjct: 23353194 gacggggacgatgccggcgcggtactgggcgatgtggaggaatgccggctcggccatgtc 23353253
Query: 822 gaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 881
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23353254 gaagtgagggcggggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttggg 23353313
Query: 882 cgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcccgttgtt 941
||||||||||||||||||||| |||||||||| ||||||||||||||| |||| |||
Sbjct: 23353314 cgggcagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcccggcgtt 23353373
Query: 942 gtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgct 1001
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 23353374 gtcgcaccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcgccgtgct 23353433
Query: 1002 cagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgcc 1061
||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||| || ||
Sbjct: 23353434 cagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgcaagcccc 23353493
Query: 1062 gcc 1064
|||
Sbjct: 23353494 gcc 23353496
Score = 85.7 bits (43), Expect = 5e-014
Identities = 94/111 (84%)
Strand = Plus / Plus
Query: 803 aggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgc 862
|||||||||| | ||||||||||||| | ||||| ||||||||||| |||||| || ||
Sbjct: 11293963 aggccggctgtgacatgtcgaagtgctgccgcggtgggttgcaccacccgccgctgttgc 11294022
Query: 863 tggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
|||| || | |||| |||||||| |||||||||||||||| ||||||||
Sbjct: 11294023 tgggcagcgcccagttaggcgggcataagttggtggccgtgatggtgatgg 11294073
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccac 1119
||||| ||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 23353589 cccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctctgccac 23353645
Score = 77.8 bits (39), Expect = 1e-011
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 803 aggccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgc 862
|||||||||| | ||||||||||||| ||| |||||||||||||| |||||| ||||||
Sbjct: 11318619 aggccggctgcgacatgtcgaagtgcttgcgaggcgggttgcaccacccgccggcgtcgc 11318678
Query: 863 tggggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| |||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 11318679 ttttttttgcgtagttgggcgggcacaggttggtggccgtgatggtgatgg 11318729
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 975 ggcgccgtcgttgaacagcgccgtgctcagcgccgc 1010
||||||||||||||||||||||| ||||||||||||
Sbjct: 11318797 ggcgccgtcgttgaacagcgccgagctcagcgccgc 11318832
Score = 63.9 bits (32), Expect = 2e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 975 ggcgccgtcgttgaacagcgccgtgctcagcgccgc 1010
||||||||||||||||||||||| ||||||||||||
Sbjct: 11294144 ggcgccgtcgttgaacagcgccgagctcagcgccgc 11294179
Score = 46.1 bits (23), Expect = 0.047
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagtt 599
||||||||||||||| |||||||||||
Sbjct: 11318243 gttgctctgccagttttggccccagtt 11318269
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 543 gaaggacaggctctggccgtcgaggagcgagttgctctgcca 584
||||||||||||||| ||| ||||| || ||||||||||||
Sbjct: 11293122 gaaggacaggctctgcccggcgaggtacgcgttgctctgcca 11293163
>gb|C72427.1|C72427 C72427 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1603_1A, mRNA sequence
Length = 441
Score = 339 bits (171), Expect = 2e-090
Identities = 303/341 (88%), Gaps = 6/341 (1%)
Strand = Plus / Minus
Query: 610 ggctgccacccggtgctggagcccttgatggacacggactgcacgtccccggcgccggcc 669
|||||| |||||||| |||| |||||||| |||||||||||||||| || | |||||||
Sbjct: 342 ggctgcaacccggtgttggaccccttgatcaacacggactgcacgtcgcctg-gccggcc 284
Query: 670 acgttggtcacca--gcaccaggttgaa-gtaggagtggccgttgatggtgaacctgatc 726
|||||||||| || | ||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 283 acgttggtcaacaaagaaccaggttgaaagtagaagtgcccgttgatggtgaacctgatc 224
Query: 727 ccgcccttcttcacgcacggcaccctcctgtaggcgacgggcacgatgccggcgcggtac 786
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 223 ccgcccttcttcacgcacggcacccttctgtaggagacgggcacgatgccggcgcggtac 164
Query: 787 tgcgcgatctggaggaaggccggctgggccatgtcgaagtgcgggcgcggcgggttgcac 846
||||||||||||| ||||||| ||||||||||||||| ||||||||| ||||||||
Sbjct: 163 acgccgatctggaggaa-gccggctcggccatgtcgaagtgggggcgcggc-ggttgcac 106
Query: 847 cagccgccgtcgtcgctggggaggccgtagttgggcgggcagaagttggtggccgtgacg 906
||||||||||||||| ||||||| ||||||| |||||||| | ||||||| | ||||||
Sbjct: 105 cagccgccgtcgtcgttggggagcgcgtagttcggcgggcacaggttggtgncggtgacg 46
Query: 907 gtgatggtgcccggcaggcacgactgcccgttgttgtcgca 947
|||| | |||||||||||||| ||||||| | |||||||||
Sbjct: 45 gtgacgctgcccggcaggcaccactgcccatcgttgtcgca 5
>gb|BE039217.1|BE039217 OA01E03 OA Oryza sativa (japonica cultivar-group) cDNA 5' similar to
expansin, mRNA sequence
Length = 607
Score = 303 bits (153), Expect = 1e-079
Identities = 268/305 (87%), Gaps = 1/305 (0%)
Strand = Plus / Minus
Query: 815 ccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgt 874
||||||| ||||| || || | |||||||||||| | |||||||||||||| || ||||
Sbjct: 441 ccatgtcaaagtgaggccgggccgggttgcaccaccgcccgtcgtcgctgggaagcccgt 382
Query: 875 agttgggcgggcagaagttggtggccgtgacggtgatggtgcccggcaggcacgactgcc 934
|||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 381 agttgggcggccagaagttggtggccgtcacggtgatggagcccggcaggcacgaactcc 322
Query: 935 cgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcg 994
|| |||||| || |||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 321 cggcgttgtc-caccgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcg 263
Query: 995 ccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgc 1054
|||||||||||||||| ||||| ||||| ||||| |||||||| ||| ||||| ||||
Sbjct: 262 ccgtgctcagcgccgcggtgttcgtgccatacccttggctgtacaggttgccgtaaccgc 203
Query: 1055 acgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctct 1114
| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 202 aagccccgcccatggtgccggaagcatcgccgccgccgtagaacgtggcgtgggcgctct 143
Query: 1115 gccac 1119
|||||
Sbjct: 142 gccac 138
>gb|D41419.1|D41419 RICS3911A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 383
Score = 301 bits (152), Expect = 5e-079
Identities = 251/282 (89%), Gaps = 8/282 (2%)
Strand = Plus / Minus
Query: 914 tgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacg 973
||||||| |||||| ||||||| | ||||||||| |||||||||||||| ||||||||||
Sbjct: 371 tgcccggnaggcaccactgcccatcgttgtcgcaccgcagctcgtagcacgacccgcacg 312
Query: 974 cggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgc 1033
| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 311 ccgcgccgtcgttgaacagcaccgtgctcagcgccgccgtgttggtgccgtacccggtgc 252
Query: 1034 tgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgt 1093
|||||| |||||| || || ||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 251 tgtacaggttcccatacccacacgccccgcccatcgtgccggacgcatcgccgccgccgt 192
Query: 1094 agaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggc-cgcccggtgggca 1152
||||||||||||||||||||||||| |||||||||||| || |||| |||| ||||
Sbjct: 191 agaacgtggcgtgggcgctctgccaggagccgtagtcggcggcggctcgcc----gggcg 136
Query: 1153 agggagcagaaggctgagcagagcaggaggagcagggcacta 1194
||| |||||||||| ||| || ||||||||||||||||||
Sbjct: 135 aggaagcagaaggccgagaag---aggaggagcagggcacta 97
>gb|D41260.1|D41260 RICS3629A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 431
Score = 287 bits (145), Expect = 7e-075
Identities = 249/282 (88%), Gaps = 8/282 (2%)
Strand = Plus / Minus
Query: 914 tgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacg 973
||||||| |||||| ||||||| | ||||||||| || ||||||||||| |||||| |||
Sbjct: 371 tgcccggaaggcaccactgcccatcgttgtcgcaccgnagctcgtagcacgacccgnacg 312
Query: 974 cggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgc 1033
| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 311 ccgcgccgtcgttgaacagcaccgtgctcagcgccgccgtgttggtgccgtacccggtgc 252
Query: 1034 tgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgt 1093
|||||| |||||| || || ||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 251 tgtacaggttcccatacccacacgccccgcccatcgtgccggacgcatcgccgccgccgt 192
Query: 1094 agaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggc-cgcccggtgggca 1152
||||||||||||||||||||||||| |||||||||||| || |||| |||| ||||
Sbjct: 191 agaacgtggcgtgggcgctctgccaggagccgtagtcggcggcggctcgcc----gggcg 136
Query: 1153 agggagcagaaggctgagcagagcaggaggagcagggcacta 1194
||| |||||||||| ||| || ||||||||||||||||||
Sbjct: 135 aggaagcagaaggccgagaag---aggaggagcagggcacta 97
>gb|AU081601.1|AU081601 AU081601 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S0721_2Z, mRNA sequence
Length = 704
Score = 287 bits (145), Expect = 7e-075
Identities = 192/208 (92%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 222 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 163
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 162 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 103
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgg 628
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 102 aggagttgctctgccagttctggccccagttgcgggacatgggctggcacccggtgctgg 43
Query: 629 agcccttgatggacacggactgcacgtc 656
| |||||||| ||||||||||| |||||
Sbjct: 42 accccttgatcgacacggactgnacgtc 15
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 385 gcctaagcgggtgctaattaataagcagcctcagaat 349
>gb|D40432.1|D40432 RICS2408A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 324
Score = 278 bits (140), Expect = 7e-072
Identities = 208/231 (90%)
Strand = Plus / Minus
Query: 901 gtgacggtgatggtgcccggcaggcacgactgcccgttgttgtcgcagcgcagctcgtag 960
|||||||||| | |||||||||||||| ||||||| | ||||||||| |||| ||||||
Sbjct: 322 gtgacggtgacgctgcccggcaggcaccactgcccatcgttgtcgcaccgcaaatcgtag 263
Query: 961 caggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtg 1020
|| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 262 cacgacccgcacgccgcgccgtcgttgaacagcaccgtgctcagcgccgccgtgttggtg 203
Query: 1021 ccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcg 1080
|||||||| |||||||||| ||| || || || ||||| ||||||||||| || |||||
Sbjct: 202 ccgtacccggtgctgtacaggtttccatacccacacgccccgcccatcgtnccggacgca 143
Query: 1081 tcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtagtcg 1131
||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 142 tcgccgccgccgtagaacgtgccgtgggcgctctgccaggagccgtagtcg 92
>gb|D39423.1|D39423 RICS0736A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 368
Score = 270 bits (136), Expect = 2e-069
Identities = 221/247 (89%), Gaps = 8/247 (3%)
Strand = Plus / Minus
Query: 949 cgcagctcgtagcaggacccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgcc 1008
|||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 337 cgcagctcgtagcacgacccgcacgccgcgccgtcgttgaacagcaccgtgctcagcgcc 278
Query: 1009 gccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgcgccgcccatc 1068
|||||||||||||||||||| |||||||||| |||||| || || ||||| |||||||||
Sbjct: 277 gccgtgttggtgccgtacccggtgctgtacaggttcccatacccacacgccccgcccatc 218
Query: 1069 gtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcgctctgccacgagccgtag 1128
||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 217 gtgccggacgcatcgccgccgccgtagaacgtggcgtgggcgctctgccaggagccgtag 158
Query: 1129 tcgacgccggc-cgcccggtgggcaagggagcagaaggctgagcagagcaggaggagcag 1187
||| || |||| |||| |||| ||| |||||||||| ||| || |||||||||||
Sbjct: 157 tcggcggcggctcgcc----gggcgaggaagcagaaggccgagaag---aggaggagcag 105
Query: 1188 ggcacta 1194
|||||||
Sbjct: 104 ggcacta 98
>gb|D41913.1|D41913 RICS4917A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 344
Score = 258 bits (130), Expect = 7e-066
Identities = 184/203 (90%)
Strand = Plus / Minus
Query: 929 actgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtcgttga 988
||||||| | ||||||||| |||||||||||||| |||||||||| ||||||||||||
Sbjct: 340 actgcccatcgttgtcgcaccgcagctcgtagcacgacccgcacgncncgccgtcgttga 281
Query: 989 acagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgt 1048
||||| |||||||||||||||||||||||||| ||||||| |||||||||| |||||| |
Sbjct: 280 acagcaccgtgctcagcgccgccgtgttggtgacgtacccggtgctgtacaggttcccat 221
Query: 1049 agccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtggg 1108
| || ||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||
Sbjct: 220 acccacacgccccgcccatcgtgccggacgcatcgccgccgncgtagaacgtggcgtggg 161
Query: 1109 cgctctgccacgagccgtagtcg 1131
|||||||||| ||||||||||||
Sbjct: 160 cgctctgccaggagccgtagtcg 138
>gb|D24200.1|D24200 RICR1518A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R1518_1A, mRNA sequence
Length = 361
Score = 258 bits (130), Expect = 7e-066
Identities = 237/272 (87%), Gaps = 8/272 (2%)
Strand = Plus / Minus
Query: 924 gcacgactgcccgttgttgtcgcagcgcagctcgtagcaggacccgcacgcggcgccgtc 983
|||| ||||||| | ||||||||| |||||||||||||| |||||| |||| ||||||||
Sbjct: 361 gcaccactgcccatcgttgtcgcaccgcagctcgtagcacgacccgnacgccgcgccgtc 302
Query: 984 gttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgtt 1043
|||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct: 301 gttgaacagcaccgtgctcagcgncgccgtgttggtgccgtacccggtgctgtacaggtt 242
Query: 1044 cccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggc 1103
||| || || ||||| |||||||||||||| ||||| ||| || |||||||||||||| |
Sbjct: 241 cccatacccacacgccccgcccatcgtgccggacgcatcgncgncgccgtagaacgtgnc 182
Query: 1104 gtgggcgctctgccacgagccgtagtcgacgccggc-cgcccggtgggcaagggagcaga 1162
||||||||||||||| |||||||||||| || |||| |||| |||| ||| ||||||
Sbjct: 181 gtgggcgctctgccaggagccgtagtcggcggcggctcgcc----gggcgaggaagcaga 126
Query: 1163 aggctgagcagagcaggaggagcagggcacta 1194
|||| ||| || ||||||||||||||||||
Sbjct: 125 aggccgagaag---aggaggagcagggcacta 97
>gb|D49095.1|D49095 RICS15755A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 285
Score = 250 bits (126), Expect = 2e-063
Identities = 198/223 (88%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 458 cgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgctggtgacgg 517
||||||||||| |||| || |||||||| || ||||| |||| ||||||||||||||
Sbjct: 237 cgccctcgaagntctg-ccnaactgccatccggccggcacgacnttgttgctggtgacgg 179
Query: 518 tgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcgagttgc 577
|||| || |||||| ||| |||||||||||| |||||||||||||||||| |||||||
Sbjct: 178 tgcgnccntcgctgacggcgacctggaaggagaggctctggccgtcgaggtaggagttgc 119
Query: 578 tctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcccttga 637
||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 118 tctgccanttctggccccanttgcgggacatgggctgccacccggtgctggaccccttga 59
Query: 638 tggacacggactgcacgtccccggcgccggccacgttggtcac 680
| ||||||||||||||||| || | ||||||||||||||||||
Sbjct: 58 tcgacacggactgcacgtcgcctgggccggccacgttggtcac 16
>gb|AU078738.1|AU078738 AU078738 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S4917_8Z, mRNA sequence
Length = 637
Score = 222 bits (112), Expect = 4e-055
Identities = 148/160 (92%)
Strand = Plus / Minus
Query: 449 agaactgggcgccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgc 508
|||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 160 agaactggccgccctcgaaggtctggccgaactgccagccggccggcacgacgttgttgc 101
Query: 509 tggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgagga 568
||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||
Sbjct: 100 tggtgacggtgcggccgtcgctgacggcgacctggaaggagaggctctggccgtcgaggt 41
Query: 569 gcgagttgctctgccagttctggccccagttgcgggacat 608
||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aggagttgctctgccagttctggccccagttgcgggacat 1
Score = 50.1 bits (25), Expect = 0.003
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Minus
Query: 326 gcctaagcgggtgctaa-taataagcagcctcggaat 361
||||||||||||||||| |||||||||||||| ||||
Sbjct: 323 gcctaagcgggtgctaattaataagcagcctcagaat 287
>gb|CB645779.1|CB645779 OSJNEb07L24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07L24 5', mRNA sequence
Length = 838
Score = 218 bits (110), Expect = 6e-054
Identities = 221/258 (85%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 716 tgcacgtcgccggcgccgcccacgttggtcaccagcaccaggttgaagtaggagtgcccg 657
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
||||||||||||| |||||||||||||||| ||| | ||||| | ||||| ||||||
Sbjct: 656 ttgatggtgaaccggatcccgcccttcttctggcaagccacccggcggtaggagacgggg 597
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|| |||||||| | | | ||||| | ||||| | ||||||| |||||||||||||
Sbjct: 596 acaatgccggccttgaagagagcgatgcgctggaagacgggctgggacatgtcgaagtgc 537
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
| |||||| |||||||||||||||||||||||| ||||| ||| ||| |||||||||
Sbjct: 536 gcgcgcggagggttgcaccagccgccgtcgtcggacgggagcgcgttgttcggcgggcag 477
Query: 889 aagttggtggccgtgacg 906
||||||||||||||||||
Sbjct: 476 aagttggtggccgtgacg 459
Score = 145 bits (73), Expect = 7e-032
Identities = 115/129 (89%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 378 gccgttgttgaacagcgccgtgctcagcgccgccgtgttcgtcccgtacccctggctgta 319
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaa 1097
| ||||||||| |||||||| || ||||| ||||| |||||||| || |||||||||||
Sbjct: 318 gaggttcccgtacccgcacgcccctcccatggtgcccgacgcgtcacccccgccgtagaa 259
Query: 1098 cgtggcgtg 1106
|||||||||
Sbjct: 258 cgtggcgtg 250
Score = 63.9 bits (32), Expect = 2e-007
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagttgcgggacatgggctgccac 618
||||||||||||| | ||||||||||||||| ||||||||||| |||| || |||||||
Sbjct: 809 ccgtcgaggagcgcggcgctctgccagttctgaccccagttgcgcgacagggcctgccac 750
>dbj|AK073572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E11, full
insert sequence
Length = 1416
Score = 218 bits (110), Expect = 6e-054
Identities = 221/258 (85%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 747 tgcacgtcgccggcgccgcccacgttggtcaccagcaccaggttgaagtaggagtgcccg 688
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
||||||||||||| |||||||||||||||| ||| | ||||| | ||||| ||||||
Sbjct: 687 ttgatggtgaaccggatcccgcccttcttctggcaagccacccggcggtaggagacgggg 628
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|| |||||||| | | | ||||| | ||||| | ||||||| |||||||||||||
Sbjct: 627 acaatgccggccttgaagagagcgatgcgctggaagacgggctgggacatgtcgaagtgc 568
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
| |||||| |||||||||||||||||||||||| ||||| ||| ||| |||||||||
Sbjct: 567 gcgcgcggagggttgcaccagccgccgtcgtcggacgggagcgcgttgttcggcgggcag 508
Query: 889 aagttggtggccgtgacg 906
||||||||||||||||||
Sbjct: 507 aagttggtggccgtgacg 490
Score = 145 bits (73), Expect = 7e-032
Identities = 115/129 (89%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 409 gccgttgttgaacagcgccgtgctcagcgccgccgtgttcgtcccgtacccctggctgta 350
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaa 1097
| ||||||||| |||||||| || ||||| ||||| |||||||| || |||||||||||
Sbjct: 349 gaggttcccgtacccgcacgcccctcccatggtgcccgacgcgtcacccccgccgtagaa 290
Query: 1098 cgtggcgtg 1106
|||||||||
Sbjct: 289 cgtggcgtg 281
Score = 83.8 bits (42), Expect = 2e-013
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 513 gacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcga 572
||||| ||||||||||| || |||||| ||||||| || ||| |||||||||||||
Sbjct: 886 gacggagcggccgtcgccggtggtgacgcggaaggagagcgcctgaccgtcgaggagcgc 827
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccac 618
| ||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 826 ggcgctctgccagttctggccccagttgcgcgacagggcctgccac 781
>ref|XM_467754.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1289
Score = 218 bits (110), Expect = 6e-054
Identities = 221/258 (85%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 742 tgcacgtcgccggcgccgcccacgttggtcaccagcaccaggttgaagtaggagtgcccg 683
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
||||||||||||| |||||||||||||||| ||| | ||||| | ||||| ||||||
Sbjct: 682 ttgatggtgaaccggatcccgcccttcttctggcaagccacccggcggtaggagacgggg 623
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|| |||||||| | | | ||||| | ||||| | ||||||| |||||||||||||
Sbjct: 622 acaatgccggccttgaagagagcgatgcgctggaagacgggctgggacatgtcgaagtgc 563
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
| |||||| |||||||||||||||||||||||| ||||| ||| ||| |||||||||
Sbjct: 562 gcgcgcggagggttgcaccagccgccgtcgtcggacgggagcgcgttgttcggcgggcag 503
Query: 889 aagttggtggccgtgacg 906
||||||||||||||||||
Sbjct: 502 aagttggtggccgtgacg 485
Score = 145 bits (73), Expect = 7e-032
Identities = 115/129 (89%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 404 gccgttgttgaacagcgccgtgctcagcgccgccgtgttcgtcccgtacccctggctgta 345
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaa 1097
| ||||||||| |||||||| || ||||| ||||| |||||||| || |||||||||||
Sbjct: 344 gaggttcccgtacccgcacgcccctcccatggtgcccgacgcgtcacccccgccgtagaa 285
Query: 1098 cgtggcgtg 1106
|||||||||
Sbjct: 284 cgtggcgtg 276
Score = 83.8 bits (42), Expect = 2e-013
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 513 gacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcga 572
||||| ||||||||||| || |||||| ||||||| || ||| |||||||||||||
Sbjct: 881 gacggagcggccgtcgccggtggtgacgcggaaggagagcgcctgaccgtcgaggagcgc 822
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccac 618
| ||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 821 ggcgctctgccagttctggccccagttgcgcgacagggcctgccac 776
>ref|XM_506968.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E02.30
mRNA
Length = 1417
Score = 218 bits (110), Expect = 6e-054
Identities = 221/258 (85%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 748 tgcacgtcgccggcgccgcccacgttggtcaccagcaccaggttgaagtaggagtgcccg 689
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
||||||||||||| |||||||||||||||| ||| | ||||| | ||||| ||||||
Sbjct: 688 ttgatggtgaaccggatcccgcccttcttctggcaagccacccggcggtaggagacgggg 629
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|| |||||||| | | | ||||| | ||||| | ||||||| |||||||||||||
Sbjct: 628 acaatgccggccttgaagagagcgatgcgctggaagacgggctgggacatgtcgaagtgc 569
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
| |||||| |||||||||||||||||||||||| ||||| ||| ||| |||||||||
Sbjct: 568 gcgcgcggagggttgcaccagccgccgtcgtcggacgggagcgcgttgttcggcgggcag 509
Query: 889 aagttggtggccgtgacg 906
||||||||||||||||||
Sbjct: 508 aagttggtggccgtgacg 491
Score = 145 bits (73), Expect = 7e-032
Identities = 115/129 (89%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 410 gccgttgttgaacagcgccgtgctcagcgccgccgtgttcgtcccgtacccctggctgta 351
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaa 1097
| ||||||||| |||||||| || ||||| ||||| |||||||| || |||||||||||
Sbjct: 350 gaggttcccgtacccgcacgcccctcccatggtgcccgacgcgtcacccccgccgtagaa 291
Query: 1098 cgtggcgtg 1106
|||||||||
Sbjct: 290 cgtggcgtg 282
Score = 83.8 bits (42), Expect = 2e-013
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 513 gacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcga 572
||||| ||||||||||| || |||||| ||||||| || ||| |||||||||||||
Sbjct: 887 gacggagcggccgtcgccggtggtgacgcggaaggagagcgcctgaccgtcgaggagcgc 828
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccac 618
| ||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 827 ggcgctctgccagttctggccccagttgcgcgacagggcctgccac 782
>ref|XM_493787.1| Oryza sativa (japonica cultivar-group), Ozsa8506 predicted mRNA
Length = 747
Score = 216 bits (109), Expect = 2e-053
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 684 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 625
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 624 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 565
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 564 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 505
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 504 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 445
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 444 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 385
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 384 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 325
Query: 870 gccgtagttgggcgggcagaagttggtggccgt 902
|||||||||||||||||| ||||||||||||
Sbjct: 324 cgcgtagttgggcgggcagaggttggtggccgt 292
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 218 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 159
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 158 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 99
Query: 1099 gt 1100
||
Sbjct: 98 gt 97
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 216 bits (109), Expect = 2e-053
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 9523459 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 9523400
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 9523399 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 9523340
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 9523339 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 9523280
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 9523279 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 9523220
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 9523219 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 9523160
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 9523159 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 9523100
Query: 870 gccgtagttgggcgggcagaagttggtggccgt 902
|||||||||||||||||| ||||||||||||
Sbjct: 9523099 cgcgtagttgggcgggcagaggttggtggccgt 9523067
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 9522993 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 9522934
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 9522933 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 9522874
Query: 1099 gt 1100
||
Sbjct: 9522873 gt 9522872
Score = 105 bits (53), Expect = 6e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| ||||||||||||||||||| |||||| |||||| |
Sbjct: 8193197 gccggctgcgacatgtcgaagtggcggcgcggcgggttgcaccacccgccggcgtcgccg 8193256
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| ||| ||||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 8193257 gacagggcgtagtttggagggcagaagttggtcgccgtcacggtgatgg 8193305
Score = 79.8 bits (40), Expect = 3e-012
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| | ||||||||||||||||| |||||| |||||| |
Sbjct: 8198911 gccggctgcgacatgtcgaagtggcgccgcggcgggttgcaccacccgccggcgtcgccg 8198970
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggt 908
| || |||||||||||||||| ||||||| ||||| |||||
Sbjct: 8198971 gactcgctgtagttgggcgggcagtagttggtcgccgtcacggt 8199014
Score = 77.8 bits (39), Expect = 1e-011
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtac 1026
||||||| ||||||||| | ||||||||| ||||||||||| |||||| || ||||||
Sbjct: 8199079 ccgcacgacgcgccgtcgccgtacagcgccgagctcagcgccgtcgtgttcgtcccgtac 8199138
Query: 1027 cccgtgctgtacatgttcccgtagccgcacg 1057
|| | |||||||||||| ||||| |||||||
Sbjct: 8199139 ccggcgctgtacatgttgccgtacccgcacg 8199169
Score = 69.9 bits (35), Expect = 3e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgt 1013
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8193365 ccgcacgacgcgccgccgttgaacagcgccgtgctcagcgccgccgt 8193411
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcg 1104
||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 8199273 cccatggtgccggacgcgtcgctgccgccgtagaacgtggcg 8199314
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagttgcgg 603
||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 8192951 ccgtcgaggcgcgcgttgctctgccagttcgcgccccagttgcgg 8192995
Score = 44.1 bits (22), Expect = 0.18
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgt 1100
||||| ||||| || ||||||| |||||||||||||||
Sbjct: 8193582 cccatggtgccggaggcgtcgctgccgccgtagaacgt 8193619
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0424A08
Length = 151294
Score = 216 bits (109), Expect = 2e-053
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 59266 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 59207
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 59206 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 59147
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 59146 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 59087
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 59086 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 59027
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 59026 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 58967
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 58966 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 58907
Query: 870 gccgtagttgggcgggcagaagttggtggccgt 902
|||||||||||||||||| ||||||||||||
Sbjct: 58906 cgcgtagttgggcgggcagaggttggtggccgt 58874
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 58800 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 58741
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 58740 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 58681
Query: 1099 gt 1100
||
Sbjct: 58680 gt 58679
>gb|DQ062981.1| Oryza sativa (japonica cultivar-group) alpha-expansin 11 (EXPA11)
mRNA, partial cds
Length = 798
Score = 216 bits (109), Expect = 2e-053
Identities = 322/393 (81%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 675 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 616
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 615 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 556
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 555 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 496
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 495 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 436
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 435 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 376
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 375 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 316
Query: 870 gccgtagttgggcgggcagaagttggtggccgt 902
|||||||||||||||||| ||||||||||||
Sbjct: 315 cgcgtagttgggcgggcagaggttggtggccgt 283
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 209 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 150
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 149 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 90
Query: 1099 gt 1100
||
Sbjct: 89 gt 88
>dbj|AK107334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-F08, full
insert sequence
Length = 1290
Score = 210 bits (106), Expect = 1e-051
Identities = 220/258 (85%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 742 tgcacgtcgccggcgccgcccacgttggtcaccagcaccaggttgaagtaggagtgcccg 683
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
||||||||||||| |||||||||||||||| ||| | ||||| | ||||| ||||||
Sbjct: 682 ttgatggtgaaccggatcccgcccttcttctggcaagccacccggcggtaggagacgggg 623
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|| |||||||| | | | ||||| | ||||| | ||||||| |||||||||||||
Sbjct: 622 acaatgccggccttgaagagagcgatgcgctggaagacgggctgggacatgtcgaagtgc 563
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
| |||||| |||||||||| ||||||||||||| ||||| ||| ||| |||||||||
Sbjct: 562 gcgcgcggagggttgcaccggccgccgtcgtcggacgggagcgcgttgttcggcgggcag 503
Query: 889 aagttggtggccgtgacg 906
||||||||||||||||||
Sbjct: 502 aagttggtggccgtgacg 485
Score = 145 bits (73), Expect = 7e-032
Identities = 115/129 (89%)
Strand = Plus / Minus
Query: 978 gccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgta 1037
||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 404 gccgttgttgaacagcgccgtgctcagcgccgccgtgttcgtcccgtacccctggctgta 345
Query: 1038 catgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaa 1097
| ||||||||| |||||||| || ||||| ||||| |||||||| || |||||||||||
Sbjct: 344 gaggttcccgtacccgcacgcccctcccatggtgcccgacgcgtcacccccgccgtagaa 285
Query: 1098 cgtggcgtg 1106
|||||||||
Sbjct: 284 cgtggcgtg 276
Score = 83.8 bits (42), Expect = 2e-013
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 513 gacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcga 572
||||| ||||||||||| || |||||| ||||||| || ||| |||||||||||||
Sbjct: 881 gacggagcggccgtcgccggtggtgacgcggaaggagagcgcctgaccgtcgaggagcgc 822
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccac 618
| ||||||||||||||||||||||||||| |||| || |||||||
Sbjct: 821 ggcgctctgccagttctggccccagttgcgcgacagggcctgccac 776
>gb|AACV01000668.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000668, whole
genome shotgun sequence
Length = 31747
Score = 202 bits (102), Expect = 3e-049
Identities = 322/394 (81%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 5360 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 5419
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 5420 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 5479
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 5480 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 5539
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 5540 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 5599
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 5600 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 5659
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 5660 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 5719
Query: 870 gccgtagttgggc-gggcagaagttggtggccgt 902
||||||||||| ||||||| ||||||||||||
Sbjct: 5720 cgcgtagttgggcggggcagaggttggtggccgt 5753
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Plus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 5827 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 5886
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 5887 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 5946
Query: 1099 gt 1100
||
Sbjct: 5947 gt 5948
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 202 bits (102), Expect = 3e-049
Identities = 322/394 (81%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 510 ggtgacggtgcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggag 569
||||||||||||||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 9573333 ggtgacggtgcggccgtcgctggcggtgaccctgaaggagagcggctggccgtcgaggtt 9573274
Query: 570 cgagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctgga 629
| | | |||||||||| |||||||||| || ||||| ||||||||| | | ||
Sbjct: 9573273 ggcgccgttctgccagttggcgccccagttgtggctcatggcctgccaccccgaccgcga 9573214
Query: 630 gcccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccag 689
||||| | ||||| | | |||||| ||||||||| | |||||||| || ||||||||
Sbjct: 9573213 ccccttcaccgacaccgccgtcacgtcgccggcgccgccgacgttggtgacgagcaccag 9573154
Query: 690 gttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcac 749
||||||||||||||||||| |||||||||||| ||| ||||||| |||| |||||| |||
Sbjct: 9573153 gttgaagtaggagtggccggtgatggtgaaccggatgccgccctgcttcgcgcacgccac 9573094
Query: 750 cctcctgtaggcgacgggcacgatgccggcgcggtactgcgcgatctggaggaaggccgg 809
| || ||| || ||||| | |||||||||| |||||||||| | ||| |||||
Sbjct: 9573093 gcgccggtactgcaccggcaccacgccggcgcgggcctgcgcgatcctggtgaacgccgg 9573034
Query: 810 ctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctggggag 869
|| ||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||
Sbjct: 9573033 ctccgccatgtcgaagtgcggccgcggcgggttgcaccacccgccggcgtcgccggcgag 9572974
Query: 870 gccgtagttgggc-gggcagaagttggtggccgt 902
||||||||||| ||||||| ||||||||||||
Sbjct: 9572973 cgcgtagttgggcggggcagaggttggtggccgt 9572940
Score = 139 bits (70), Expect = 4e-030
Identities = 109/122 (89%)
Strand = Plus / Minus
Query: 979 ccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtac 1038
|||| ||||||||||||||||||||||||||||||| | || |||||||| | |||||||
Sbjct: 9572866 ccgttgttgaacagcgccgtgctcagcgccgccgtgctcgtcccgtacccggcgctgtac 9572807
Query: 1039 atgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaac 1098
| ||| ||||| ||||||||||| |||||||| || |||||||||| |||||||||||||
Sbjct: 9572806 aggttgccgtacccgcacgcgccacccatcgtccccgacgcgtcgctgccgccgtagaac 9572747
Query: 1099 gt 1100
||
Sbjct: 9572746 gt 9572745
Score = 105 bits (53), Expect = 6e-020
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| ||||||||||||||||||| |||||| |||||| |
Sbjct: 8243898 gccggctgcgacatgtcgaagtggcggcgcggcgggttgcaccacccgccggcgtcgccg 8243957
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacggtgatgg 913
| ||| ||||||| || |||||||||||||| ||||| ||||||||||
Sbjct: 8243958 gacagggcgtagtttggagggcagaagttggtcgccgtcacggtgatgg 8244006
Score = 69.9 bits (35), Expect = 3e-009
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 805 gccggctgggccatgtcgaagtgcgggcgcggcgggttgcaccagccgccgtcgtcgctg 864
|||||||| | |||||||||||| | ||||||||||||||||| |||||| |||||| |
Sbjct: 8249614 gccggctgcgacatgtcgaagtggcgccgcggcgggttgcaccacccgccggcgtcgccg 8249673
Query: 865 gggaggccgtagttgggcgggcagaagttggtggccgtgacgg 907
| || |||||| ||||||||| ||||||| ||||| ||||
Sbjct: 8249674 gactcgctgtagtttggcgggcagtagttggtcgccgtcacgg 8249716
Score = 69.9 bits (35), Expect = 3e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 967 ccgcacgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgt 1013
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 8244066 ccgcacgacgcgccgccgttgaacagcgccgtgctcagcgccgccgt 8244112
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcg 1104
||||| ||||| |||||||||| |||||||||||||||||||
Sbjct: 8249978 cccatggtgccggacgcgtcgctgccgccgtagaacgtggcg 8250019
Score = 58.0 bits (29), Expect = 1e-005
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagttgcgg 603
||||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 8243652 ccgtcgaggcgcgcgttgctctgccagttcgcgccccagttgcgg 8243696
Score = 44.1 bits (22), Expect = 0.18
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgt 1100
||||| ||||| || ||||||| |||||||||||||||
Sbjct: 8244283 cccatggtgccggaggcgtcgctgccgccgtagaacgt 8244320
>gb|D47507.1|D47507 RICS13050A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 320
Score = 200 bits (101), Expect = 1e-048
Identities = 145/161 (90%)
Strand = Plus / Minus
Query: 971 acgcggcgccgtcgttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccg 1030
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 320 acgccgcgccgtcgttgaacagcaccgtgctcagcgccgccgtgttggtgccgtacccgg 261
Query: 1031 tgctgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgc 1090
||||||||| ||| || || || ||||| |||||||||||||| ||||| ||||||||||
Sbjct: 260 tgctgtacaggttnccatacccacacgccccgcccatcgtgccggacgcatcgccgccgc 201
Query: 1091 cgtagaacgtggcgtgggcgctctgccacgagccgtagtcg 1131
|||| |||||| ||||||| |||||||| || |||||||||
Sbjct: 200 cgtanaacgtgacgtgggcnctctgccagganccgtagtcg 160
>gb|D40027.1|D40027 RICS1746A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 317
Score = 178 bits (90), Expect = 5e-042
Identities = 194/223 (86%), Gaps = 11/223 (4%)
Strand = Plus / Minus
Query: 976 gcgccgtcgttgaaca-gcgccgtgctca-gcgccgccgtgttggtgccgtaccccgtgc 1033
|||||||||||||||| || ||||||||| |||||| |||||||||| ||||||| ||||
Sbjct: 312 gcgccgtcgttgaacaagcaccgtgctcaagcgccgncgtgttggtgncgtacccggtgc 253
Query: 1034 tgtacatgttcccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccg-ccg 1092
|||||| |||||| || || ||||| |||||||||||||| ||||| ||||||||| |||
Sbjct: 252 tgtacaggttcccatacccacacgccccgcccatcgtgccggacgcatcgccgccgcccg 193
Query: 1093 tagaacgtggcgtgggcgctctgccacgagccgtagtcgacgccggc-cgcccggtgggc 1151
|||||||||||||||||||||||||| |||||||||||| || |||| |||| ||||
Sbjct: 192 tagaacgtggcgtgggcgctctgccaggagccgtagtcggcggcggctcgcc----gggc 137
Query: 1152 aagggagcagaaggctgagcagagcaggaggagcagggcacta 1194
||| |||||||||| ||| || ||||||||||||||||||
Sbjct: 136 gaggaagcagaaggccgagaag---aggaggagcagggcacta 97
>ref|XM_470717.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 795
Score = 178 bits (90), Expect = 5e-042
Identities = 213/254 (83%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||
Sbjct: 581 tgcacgtcgccggcgccgcccacgttgctcaccagcaccaggttgaagtaggagtgcccg 522
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
|||||||||||||| ||||| |||||| || ||||| ||||| | ||||| ||||||
Sbjct: 521 ttgatggtgaacctcatccctcccttcctccggcacgccacccggcggtaggagacgggg 462
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|||||||||| || | | ||||| |||||||||| ||||||| | |||||||||
Sbjct: 461 acgatgccggactggaagcgggcgatgcggaggaaggcgggctgggagaggtcgaagtgg 402
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
|| ||||||||||||||||||||||| ||||| |||||| ||| ||||| ||||||
Sbjct: 401 tggagcggcgggttgcaccagccgccgcggtcgccggggagcgcgtggttggccgggcac 342
Query: 889 aagttggtggccgt 902
| || |||||||||
Sbjct: 341 aggtcggtggccgt 328
Score = 111 bits (56), Expect = 9e-022
Identities = 98/112 (87%)
Strand = Plus / Minus
Query: 999 gctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgc 1058
||||||||||||||||| |||||||||||| | |||| |||||||||| ||||||||
Sbjct: 207 gctcagcgccgccgtgtccgtgccgtacccctgcccgtacgtgttcccgtacccgcacgc 148
Query: 1059 gccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcg 1110
||| ||||| ||||| || |||||| ||||||||||||| ||||||||||||
Sbjct: 147 gccacccatggtgccggaggcgtcggcgccgccgtagaaggtggcgtgggcg 96
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagtt 599
|||||||| |||| | ||||||||||||||||||||||||
Sbjct: 680 ccgtcgagcagcgcgccgctctgccagttctggccccagtt 640
>gb|DQ061062.1| Oryza sativa (japonica cultivar-group) alpha-expansin 21 (EXPA21)
mRNA, partial cds
Length = 727
Score = 178 bits (90), Expect = 5e-042
Identities = 213/254 (83%)
Strand = Plus / Minus
Query: 649 tgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccg 708
|||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| |||
Sbjct: 558 tgcacgtcgccggcgccgcccacgttgctcaccagcaccaggttgaagtaggagtgcccg 499
Query: 709 ttgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggc 768
|||||||||||||| ||||| |||||| || ||||| ||||| | ||||| ||||||
Sbjct: 498 ttgatggtgaacctcatccctcccttcctccggcacgccacccggcggtaggagacgggg 439
Query: 769 acgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgc 828
|||||||||| || | | ||||| |||||||||| ||||||| | |||||||||
Sbjct: 438 acgatgccggactggaagcgggcgatgcggaggaaggcgggctgggagaggtcgaagtgg 379
Query: 829 gggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcag 888
|| ||||||||||||||||||||||| ||||| |||||| ||| ||||| ||||||
Sbjct: 378 tggagcggcgggttgcaccagccgccgcggtcgccggggagcgcgtggttggccgggcac 319
Query: 889 aagttggtggccgt 902
| || |||||||||
Sbjct: 318 aggtcggtggccgt 305
Score = 111 bits (56), Expect = 9e-022
Identities = 98/112 (87%)
Strand = Plus / Minus
Query: 999 gctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgttcccgtagccgcacgc 1058
||||||||||||||||| |||||||||||| | |||| |||||||||| ||||||||
Sbjct: 184 gctcagcgccgccgtgtccgtgccgtacccctgcccgtacgtgttcccgtacccgcacgc 125
Query: 1059 gccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgggcg 1110
||| ||||| ||||| || |||||| ||||||||||||| ||||||||||||
Sbjct: 124 gccacccatggtgccggaggcgtcggcgccgccgtagaaggtggcgtgggcg 73
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 559 ccgtcgaggagcgagttgctctgccagttctggccccagtt 599
|||||||| |||| | ||||||||||||||||||||||||
Sbjct: 657 ccgtcgagcagcgcgccgctctgccagttctggccccagtt 617
>dbj|AK107698.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-C08, full
insert sequence
Length = 1044
Score = 174 bits (88), Expect = 8e-041
Identities = 115/124 (92%)
Strand = Plus / Minus
Query: 984 gttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgtt 1043
||||||||||||||||||||||||||||||| | |||||||||||| |||||||| |||
Sbjct: 232 gttgaacagcgccgtgctcagcgccgccgtgctcgtgccgtacccctggctgtacaggtt 173
Query: 1044 cccgtagccgcacgcgccgcccatcgtgccagacgcgtcgccgccgccgtagaacgtggc 1103
|||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 172 cccgtacccgcacgcgccacccatcgtgccggaggcgtcgccgccgccgtagaacgtggc 113
Query: 1104 gtgg 1107
||||
Sbjct: 112 gtgg 109
Score = 168 bits (85), Expect = 5e-039
Identities = 211/253 (83%)
Strand = Plus / Minus
Query: 650 gcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgt 709
||||||| ||||||||| | |||||||| || ||||||||||||||||||| ||||||||
Sbjct: 575 gcacgtcgccggcgccgccgacgttggtgacgagcaccaggttgaagtaggcgtggccgt 516
Query: 710 tgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggca 769
||| ||||||||||| ||||||||| | |||||| ||| | | | ||| ||| || |
Sbjct: 515 tgacggtgaacctgacgccgcccttcctggcgcacgccacgcggcggaaggagaccggga 456
Query: 770 cgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgcg 829
|||| |||||| || | ||||||| ||||||| ||||||| ||| | ||||||||||
Sbjct: 455 cgatcccggcggcgtgccgcgcgatgcggaggaacgccggctcggcgaggtcgaagtgcc 396
Query: 830 ggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcaga 889
| ||||| |||||||||||||||||| ||||||| ||||| ||||||| || |||||||
Sbjct: 395 gccgcggtgggttgcaccagccgccgccgtcgctcgggagcgcgtagttcggggggcaga 336
Query: 890 agttggtggccgt 902
||||||| |||||
Sbjct: 335 agttggtcgccgt 323
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 459 gccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgctggtgacggt 518
|||||||||||||||||||||||||||||| || || || ||| || || ||||| ||
Sbjct: 784 gccctcgaaggtctggccgaactgccagccggcgggcgccacgtcggcgcaggtgaggga 725
Query: 519 gcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcgagttgct 578
||||||||||| ||||||||| ||||||| || || |||||||||| || ||||||
Sbjct: 724 gcggccgtcgccggcggtgacgcggaaggagagcgccttgccgtcgaggtacgcgttgct 665
Query: 579 ctgccagttctggccccagttgcgggacatgggctgccacc 619
|||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 664 ctgccagttctgcccccagttgcgcgacatcggctgccacc 624
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 168 bits (85), Expect = 5e-039
Identities = 211/253 (83%)
Strand = Plus / Plus
Query: 650 gcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtggccgt 709
||||||| ||||||||| | |||||||| || ||||||||||||||||||| ||||||||
Sbjct: 3786635 gcacgtcgccggcgccgccgacgttggtgacgagcaccaggttgaagtaggcgtggccgt 3786694
Query: 710 tgatggtgaacctgatcccgcccttcttcacgcacggcaccctcctgtaggcgacgggca 769
||| ||||||||||| ||||||||| | |||||| ||| | | | ||| ||| || |
Sbjct: 3786695 tgacggtgaacctgacgccgcccttcctggcgcacgccacgcggcggaaggagaccggga 3786754
Query: 770 cgatgccggcgcggtactgcgcgatctggaggaaggccggctgggccatgtcgaagtgcg 829
|||| |||||| || | ||||||| ||||||| ||||||| ||| | ||||||||||
Sbjct: 3786755 cgatcccggcggcgtgccgcgcgatgcggaggaacgccggctcggcgaggtcgaagtgcc 3786814
Query: 830 ggcgcggcgggttgcaccagccgccgtcgtcgctggggaggccgtagttgggcgggcaga 889
| ||||| |||||||||||||||||| ||||||| ||||| ||||||| || |||||||
Sbjct: 3786815 gccgcggtgggttgcaccagccgccgccgtcgctcgggagcgcgtagttcggggggcaga 3786874
Query: 890 agttggtggccgt 902
||||||| |||||
Sbjct: 3786875 agttggtcgccgt 3786887
Score = 129 bits (65), Expect = 4e-027
Identities = 137/161 (85%)
Strand = Plus / Plus
Query: 459 gccctcgaaggtctggccgaactgccagcccgccggagcgacgccgttgctggtgacggt 518
|||||||||||||||||||||||||||||| || || || ||| || || ||||| ||
Sbjct: 3786426 gccctcgaaggtctggccgaactgccagccggcgggcgccacgtcggcgcaggtgaggga 3786485
Query: 519 gcggccgtcgctggcggtgacctggaaggacaggctctggccgtcgaggagcgagttgct 578
||||||||||| ||||||||| ||||||| || || |||||||||| || ||||||
Sbjct: 3786486 gcggccgtcgccggcggtgacgcggaaggagagcgccttgccgtcgaggtacgcgttgct 3786545
Query: 579 ctgccagttctggccccagttgcgggacatgggctgccacc 619
|||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 3786546 ctgccagttctgcccccagttgcgcgacatcggctgccacc 3786586
Score = 107 bits (54), Expect = 1e-020
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 984 gttgaacagcgccgtgctcagcgccgccgtgttggtgccgtaccccgtgctgtacatgtt 1043
||||||||||||||||||||||||||||||| | |||||||||||| |||||||| |||
Sbjct: 3786978 gttgaacagcgccgtgctcagcgccgccgtgctcgtgccgtacccctggctgtacaggtt 3787037
Query: 1044 cccgtagccgcacgcgcc 1061
|||||| |||||||||||
Sbjct: 3787038 cccgtacccgcacgcgcc 3787055
Score = 73.8 bits (37), Expect = 2e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 1063 cccatcgtgccagacgcgtcgccgccgccgtagaacgtggcgtgg 1107
||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 3787171 cccatcgtgccggaggcgtcgccgccgccgtagaacgtggcgtgg 3787215
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,574,484
Number of Sequences: 438736
Number of extensions: 2574484
Number of successful extensions: 22599
Number of sequences better than 0.5: 242
Number of HSP's better than 0.5 without gapping: 262
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 18268
Number of HSP's gapped (non-prelim): 4161
length of query: 1271
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1250
effective length of database: 2,791,206,460
effective search space: 3489008075000
effective search space used: 3489008075000
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)