BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716365.2.1
(936 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP005588.1| Oryza sativa (japonica cultivar-group) chro... 557 e-156
dbj|AP005736.1| Oryza sativa (japonica cultivar-group) chro... 557 e-156
dbj|AP005589.2| Oryza sativa (japonica cultivar-group) geno... 557 e-156
dbj|AP006441.3| Oryza sativa (japonica cultivar-group) geno... 557 e-156
ref|XM_450350.1| Oryza sativa (japonica cultivar-group), mRNA 557 e-156
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 557 e-156
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 557 e-156
dbj|AK070835.1| Oryza sativa (japonica cultivar-group) cDNA... 549 e-154
gb|CB643769.1|CB643769 OSJNEb04K09.r OSJNEb Oryza sativa (j... 543 e-152
gb|AACV01019273.1| Oryza sativa (japonica cultivar-group) c... 529 e-148
gb|CH401236.1| Oryza sativa (japonica cultivar-group) chrom... 529 e-148
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 529 e-148
gb|CF310584.1|CF310584 ABF--05-F03.b1 ABF3-overexpressing t... 293 9e-077
gb|CF311151.1|CF311151 ABF--06-E06.g1 ABF3-overexpressing t... 224 7e-056
gb|CF311150.1|CF311150 ABF--06-E06.b1 ABF3-overexpressing t... 210 1e-051
dbj|AK100536.1| Oryza sativa (japonica cultivar-group) cDNA... 149 3e-033
dbj|AP005759.3| Oryza sativa (japonica cultivar-group) geno... 149 3e-033
gb|AACV01020253.1| Oryza sativa (japonica cultivar-group) c... 149 3e-033
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 149 3e-033
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 149 3e-033
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 149 3e-033
dbj|AK100261.1| Oryza sativa (japonica cultivar-group) cDNA... 131 7e-028
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 131 7e-028
dbj|AP005761.2| Oryza sativa (japonica cultivar-group) geno... 131 7e-028
gb|AACV01013626.1| Oryza sativa (japonica cultivar-group) c... 131 7e-028
dbj|AP006860.2| Oryza sativa (japonica cultivar-group) geno... 131 7e-028
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 131 7e-028
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 131 7e-028
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 131 7e-028
gb|C22455.1|C22455 C22455 Rice callus cDNA Oryza sativa (ja... 127 1e-026
gb|C97780.1|C97780 C97780 Rice callus Oryza sativa (japonic... 127 1e-026
dbj|AK103656.1| Oryza sativa (japonica cultivar-group) cDNA... 113 2e-022
dbj|AP004762.3| Oryza sativa (japonica cultivar-group) geno... 113 2e-022
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 113 2e-022
ref|XM_483096.1| Oryza sativa (japonica cultivar-group), mRNA 113 2e-022
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 113 2e-022
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 113 2e-022
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 111 7e-022
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 111 7e-022
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 111 7e-022
dbj|AK065888.1| Oryza sativa (japonica cultivar-group) cDNA... 105 4e-020
gb|AACV01005319.1| Oryza sativa (japonica cultivar-group) c... 105 4e-020
ref|XM_467557.1| Oryza sativa (japonica cultivar-group), mRNA 105 4e-020
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 105 4e-020
dbj|AP004179.3| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
dbj|AP005113.3| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 105 4e-020
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 105 4e-020
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
gb|D15569.1|D15569 RICC0846A Rice callus Oryza sativa (japo... 96 4e-017
dbj|AK102945.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
gb|AACV01010227.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
ref|XM_473399.1| Oryza sativa (japonica cultivar-group), p... 70 2e-009
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 70 2e-009
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC... 70 2e-009
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|C96919.1|C96919 C96919 Rice callus Oryza sativa (japonic... 66 4e-008
gb|C22471.1|C22471 C22471 Rice callus cDNA Oryza sativa (ja... 52 6e-004
gb|AQ365786.2|AQ365786 nbxb0064B05f CUGI Rice BAC Library O... 50 0.002
dbj|AK107126.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Parti... 50 0.002
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 50 0.002
emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC O... 50 0.002
gb|AACV01024886.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|CH401280.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
>dbj|AP005588.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone P0515B02, ***
SEQUENCING IN PROGRESS ***
Length = 147274
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 36368 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 36309
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 36308 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 36249
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 36248 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 36189
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 36188 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 36129
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 36128 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 36069
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 36068 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 36009
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 36008 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 35949
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 35948 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 35889
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 35888 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 35835
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 35834 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 35775
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 35774 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 35715
Query: 924 tt 925
||
Sbjct: 35714 tt 35713
>dbj|AP005736.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone
OSJNBb0044M12, *** SEQUENCING IN PROGRESS ***
Length = 131510
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 83445 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 83386
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 83385 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 83326
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 83325 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 83266
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 83265 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 83206
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 83205 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 83146
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 83145 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 83086
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 83085 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 83026
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 83025 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 82966
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 82965 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 82912
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 82911 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 82852
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 82851 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 82792
Query: 924 tt 925
||
Sbjct: 82791 tt 82790
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0523B07
Length = 170510
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 152840 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 152899
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 152900 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 152959
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 152960 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 153019
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 153020 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 153079
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 153080 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 153139
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 153140 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 153199
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 153200 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 153259
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 153260 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 153319
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 153320 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 153373
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 153374 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 153433
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 153434 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 153493
Query: 924 tt 925
||
Sbjct: 153494 tt 153495
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:B1279D09
Length = 134793
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 31899 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 31958
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 31959 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 32018
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 32019 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 32078
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 32079 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 32138
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 32139 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 32198
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 32199 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 32258
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 32259 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 32318
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 32319 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 32378
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 32379 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 32432
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 32433 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 32492
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 32493 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 32552
Query: 924 tt 925
||
Sbjct: 32553 tt 32554
>ref|XM_450350.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2392
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 2117 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 2058
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 2057 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 1998
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 1997 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 1938
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 1937 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 1878
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 1877 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 1818
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 1817 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 1758
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1757 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 1698
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 1697 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 1638
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 1637 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 1584
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 1583 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 1524
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 1523 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 1464
Query: 924 tt 925
||
Sbjct: 1463 tt 1462
>ref|NT_107079.1| Oryza sativa (japonica cultivar-group)
Length = 5472939
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 1525167 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 1525226
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 1525227 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 1525286
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 1525287 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 1525346
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 1525347 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 1525406
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 1525407 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 1525466
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 1525467 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 1525526
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1525527 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 1525586
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 1525587 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 1525646
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 1525647 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 1525700
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 1525701 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 1525760
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 1525761 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 1525820
Query: 924 tt 925
||
Sbjct: 1525821 tt 1525822
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 557 bits (281), Expect = e-156
Identities = 567/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 4329081 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 4329140
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 4329141 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 4329200
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 4329201 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 4329260
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 4329261 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 4329320
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 4329321 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 4329380
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 4329381 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 4329440
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 4329441 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 4329500
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 4329501 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 4329560
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 4329561 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 4329614
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 4329615 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 4329674
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 4329675 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 4329734
Query: 924 tt 925
||
Sbjct: 4329735 tt 4329736
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 18288549 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 18288490
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 18288489 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 18288430
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 18288429 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 18288370
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 18288369 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 18288310
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 18288309 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 18288250
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 18288249 tactcatgggtgccgacgaaggacatggacc 18288219
>dbj|AK070835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075E03, full
insert sequence
Length = 2391
Score = 549 bits (277), Expect = e-154
Identities = 566/662 (85%), Gaps = 9/662 (1%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 2116 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 2057
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 2056 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 1997
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 1996 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 1937
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 1936 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 1877
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 1876 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 1817
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 1816 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 1757
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||| | |||||||||
Sbjct: 1756 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttatagtctcaggtgcc 1697
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 1696 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 1637
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 1636 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 1583
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 1582 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 1523
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgcccttttgg 923
|| ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||||
Sbjct: 1522 tggatacaagctggctcgatgcacactggctgtacacaataagatggattacccttttgg 1463
Query: 924 tt 925
||
Sbjct: 1462 tt 1461
>gb|CB643769.1|CB643769 OSJNEb04K09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04K09 3', mRNA sequence
Length = 811
Score = 543 bits (274), Expect = e-152
Identities = 551/643 (85%), Gaps = 9/643 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 163 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 222
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 223 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 282
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 283 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 342
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 343 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 402
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 403 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 462
Query: 564 gccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatg 623
|| |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 463 gctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaatatg 522
Query: 624 ccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgcc 683
||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 523 ccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtgcc 582
Query: 684 aagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaagc 743
||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||||
Sbjct: 583 aagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaagc 642
Query: 744 tcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttctcc 803
||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 643 tcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt------ 696
Query: 804 ttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaaggc 863
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| ||
Sbjct: 697 ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagggt 756
Query: 864 tgcatacaggcaggctcaatgcacacaggctgcacacagtaag 906
|| ||||| || ||||| |||||||| ||||| ||||| ||||
Sbjct: 757 tggatacaagctggctcgatgcacactggctgtacacaataag 799
>gb|AACV01019273.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg019273, whole
genome shotgun sequence
Length = 17528
Score = 529 bits (267), Expect = e-148
Identities = 567/664 (85%), Gaps = 11/664 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 6784 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 6843
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 6844 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 6903
Query: 384 aatgcccaatt-aacaccttcaaagaacgggtgctgttttatttctgtggctccacgctt 442
|| ||||| || |||||||||||| || || || || ||||||||||| |||||||||||
Sbjct: 6904 aaggcccagtttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctt 6963
Query: 443 atacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagc 502
||| || || ||||| || |||||||| || ||||| |||| |||||| ||| |||||||
Sbjct: 6964 ataagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagc 7023
Query: 503 aaaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaa-caatg 561
||||||||| |||||||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 7024 aaaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaaacaatg 7083
Query: 562 tcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaata 621
| || |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||
Sbjct: 7084 ttgctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaata 7143
Query: 622 tgccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtg 681
||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 7144 tgccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtg 7203
Query: 682 ccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaa 741
||||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||
Sbjct: 7204 ccaagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaa 7263
Query: 742 gctcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttct 801
||||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 7264 gctcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt---- 7319
Query: 802 ccttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaag 861
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| |
Sbjct: 7320 --ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagg 7377
Query: 862 gctgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgccctttt 921
| || ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||
Sbjct: 7378 gttggatacaagctggctcgatgcacactggctgtacacaataagatggattaccctttt 7437
Query: 922 ggtt 925
||||
Sbjct: 7438 ggtt 7441
>gb|CH401236.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000073
genomic scaffold, whole genome shotgun sequence
Length = 383705
Score = 529 bits (267), Expect = e-148
Identities = 567/664 (85%), Gaps = 11/664 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 192881 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 192940
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 192941 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 193000
Query: 384 aatgcccaatt-aacaccttcaaagaacgggtgctgttttatttctgtggctccacgctt 442
|| ||||| || |||||||||||| || || || || ||||||||||| |||||||||||
Sbjct: 193001 aaggcccagtttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctt 193060
Query: 443 atacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagc 502
||| || || ||||| || |||||||| || ||||| |||| |||||| ||| |||||||
Sbjct: 193061 ataagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagc 193120
Query: 503 aaaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaa-caatg 561
||||||||| |||||||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 193121 aaaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaaacaatg 193180
Query: 562 tcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaata 621
| || |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||
Sbjct: 193181 ttgctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaata 193240
Query: 622 tgccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtg 681
||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 193241 tgccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtg 193300
Query: 682 ccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaa 741
||||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||
Sbjct: 193301 ccaagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaa 193360
Query: 742 gctcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttct 801
||||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 193361 gctcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt---- 193416
Query: 802 ccttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaag 861
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| |
Sbjct: 193417 --ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagg 193474
Query: 862 gctgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgccctttt 921
| || ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||
Sbjct: 193475 gttggatacaagctggctcgatgcacactggctgtacacaataagatggattaccctttt 193534
Query: 922 ggtt 925
||||
Sbjct: 193535 ggtt 193538
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 529 bits (267), Expect = e-148
Identities = 567/664 (85%), Gaps = 11/664 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 3786588 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 3786647
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 3786648 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 3786707
Query: 384 aatgcccaatt-aacaccttcaaagaacgggtgctgttttatttctgtggctccacgctt 442
|| ||||| || |||||||||||| || || || || ||||||||||| |||||||||||
Sbjct: 3786708 aaggcccagtttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctt 3786767
Query: 443 atacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagc 502
||| || || ||||| || |||||||| || ||||| |||| |||||| ||| |||||||
Sbjct: 3786768 ataagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagc 3786827
Query: 503 aaaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaa-caatg 561
||||||||| |||||||||||||||||||||| || ||||| || || ||||| |||||
Sbjct: 3786828 aaaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaaacaatg 3786887
Query: 562 tcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaata 621
| || |||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||
Sbjct: 3786888 ttgctctattccctgaacctttgaaaggtgtcttgccaaaaagaagttcatacaagaata 3786947
Query: 622 tgccaaatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtg 681
||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 3786948 tgccaaaagtccaccagtcgacagcacttccatgcccctcaccctttataatctcaggtg 3787007
Query: 682 ccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcggctctgcaacaa 741
||||||||||||||||||||||||| ||||| || ||||||||||| || ||||||||||
Sbjct: 3787008 ccaagtactcatgggtgccaacaaatgacatcgatcttgcatctgtaggttctgcaacaa 3787067
Query: 742 gctcaggaagtggtctgacctgatttgccaagtctgcctttgcctttttatcttttttct 801
||||||||||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 3787068 gctcaggaagtggtctgacctgacttgcaatgtctgtttttgccttcttctccttt---- 3787123
Query: 802 ccttggatttggaagagaaaaagcgaggagagaagcatgtggttgtcgtgacacaagaag 861
||||||||||| ||||||||||| |||| |||||||||||| || || |||||||| |
Sbjct: 3787124 --ttggatttggaggagaaaaagcgtggagcgaagcatgtggtcgttgtaacacaagagg 3787181
Query: 862 gctgcatacaggcaggctcaatgcacacaggctgcacacagtaagctgggttgccctttt 921
| || ||||| || ||||| |||||||| ||||| ||||| |||| ||| || |||||||
Sbjct: 3787182 gttggatacaagctggctcgatgcacactggctgtacacaataagatggattaccctttt 3787241
Query: 922 ggtt 925
||||
Sbjct: 3787242 ggtt 3787245
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 17059757 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 17059698
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 17059697 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 17059638
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 17059637 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 17059578
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 17059577 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 17059518
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 17059517 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 17059458
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 17059457 tactcatgggtgccgacgaaggacatggacc 17059427
>gb|CF310584.1|CF310584 ABF--05-F03.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-F03, mRNA sequence
Length = 710
Score = 293 bits (148), Expect = 9e-077
Identities = 279/323 (86%), Gaps = 6/323 (1%)
Strand = Plus / Minus
Query: 603 agaagctcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcg 662
||||| |||||||||||||||||||| ||||||||||| |||||||||||| ||||||
Sbjct: 710 agaagttcatacaagaatatgccaaaagtccaccagtcgacagcacttccaatcccctca 651
Query: 663 ccctttataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgca 722
||||||||||| |||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 650 ccctttataatctcaggtgccaagtactcatgggtgccaacaaatgacatcgatcttgca 591
Query: 723 tctgtcggctctgcaacaagctcaggaagtggtctgacctgatttgccaagtctgccttt 782
||||| || ||||||||||||||||||||||||||||||||| |||| | ||||| |||
Sbjct: 590 tctgtaggttctgcaacaagctcaggaagtggtctgacctgacttgcaatgtctgttttt 531
Query: 783 gcctttttatcttttttctccttggatttggaagagaaaaagcgaggagagaagcatgtg 842
||||| || || ||| ||||||||||| ||||||||||| |||| ||||||||||
Sbjct: 530 gccttcttctccttt------ttggatttggaggagaaaaagcgtggagcgaagcatgtg 477
Query: 843 gttgtcgtgacacaagaaggctgcatacaggcaggctcaatgcacacaggctgcacacag 902
|| || || |||||||| || || ||||| || ||||| |||||||| ||||| |||||
Sbjct: 476 gtcgttgtaacacaagagggttggatacaagctggctcgatgcacactggctgtacacaa 417
Query: 903 taagctgggttgcccttttggtt 925
|||| ||| || |||||||||||
Sbjct: 416 taagatggattacccttttggtt 394
>gb|CF311151.1|CF311151 ABF--06-E06.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-E06, mRNA sequence
Length = 447
Score = 224 bits (113), Expect = 7e-056
Identities = 262/311 (84%), Gaps = 3/311 (0%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 316 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 257
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 256 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 197
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 196 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 137
Query: 444 tacgctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagca 503
|| || || ||||| || |||||||| || ||||| |||| |||||| ||| ||||||||
Sbjct: 136 taagccaaacgatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagca 77
Query: 504 aaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtc 563
|||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 76 aaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgtt 17
Query: 564 gccctattccc 574
|| ||||||||
Sbjct: 16 gctctattccc 6
>gb|CF311150.1|CF311150 ABF--06-E06.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-E06, mRNA sequence
Length = 448
Score = 210 bits (106), Expect = 1e-051
Identities = 262/312 (83%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 132 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 191
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 192 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 251
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 252 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 311
Query: 444 tacgctaatcg-atgctgaggttccttgatgagcaatcccctaataagatcccttgcagc 502
|| || || || ||| || |||||||| || ||||| |||| |||||| ||| |||||||
Sbjct: 312 taagccaaacgaatgttgtggttccttaataagcaaaccccgaataaggtcctttgcagc 371
Query: 503 aaaactcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgt 562
||||||||| |||||||||||||||||||||| || ||||| || || |||||||||||
Sbjct: 372 aaaactcacaacaggtgattctgggaaccttagggactgtccgacaacattgaacaatgt 431
Query: 563 cgccctattccc 574
|| ||||||||
Sbjct: 432 tgctctattccc 443
>dbj|AK100536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N17, full
insert sequence
Length = 2366
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 2050 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 1991
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 1990 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 1931
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 1930 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 1871
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 1870 cgatttcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 1811
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 1810 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 1751
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 1750 tactcatgggtgccgacgaaggacatggacc 1720
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0556A05
Length = 158189
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 137273 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 137214
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 137213 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 137154
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 137153 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 137094
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 137093 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 137034
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 137033 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 136974
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 136973 tactcatgggtgccgacgaaggacatggacc 136943
>gb|AACV01020253.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020253, whole
genome shotgun sequence
Length = 20888
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Plus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 2330 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 2389
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 2390 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 2449
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 2450 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 2509
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 2510 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 2569
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 2570 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 2629
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 2630 tactcatgggtgccgacgaaggacatggacc 2660
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 3980352 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 3980293
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 3980292 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 3980233
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 3980232 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 3980173
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 3980172 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 3980113
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 3980112 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 3980053
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 3980052 tactcatgggtgccgacgaaggacatggacc 3980022
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0463G11
Length = 154188
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 3285 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 3226
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 3225 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 3166
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 3165 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 3106
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 3105 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 3046
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 3045 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 2986
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 2985 tactcatgggtgccgacgaaggacatggacc 2955
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 149 bits (75), Expect = 3e-033
Identities = 267/331 (80%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 7585946 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 7585887
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 7585886 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 7585827
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| || ||||| | |||||
Sbjct: 7585826 ctcactattggggattctgggaaccgcaagggctggccaacgacattgaagagcgtcgct 7585767
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 7585766 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 7585707
Query: 627 aatgtccaccagtctacagcacttccatgcccctcgccctttataatttcaggtgccaag 686
|| |||||||| || || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct: 7585706 aaggtccaccaatccaccgcactgccatggccctcgcctttaattatttctggggccaag 7585647
Query: 687 tactcatgggtgccaacaaaagacatagacc 717
|||||||||||||| || || ||||| ||||
Sbjct: 7585646 tactcatgggtgccgacgaaggacatggacc 7585616
>dbj|AK100261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D14, full
insert sequence
Length = 2198
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Minus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 1629 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 1570
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 1569 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 1510
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 1509 ccaacaaatgacat 1496
>ref|NT_107237.1| Oryza sativa (japonica cultivar-group)
Length = 2924261
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 110649 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 110708
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 110709 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 110768
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 110769 ccaacaaatgacat 110782
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1066D09
Length = 183999
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 70742 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 70801
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 70802 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 70861
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 70862 ccaacaaatgacat 70875
>gb|AACV01013626.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013626, whole
genome shotgun sequence
Length = 58043
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Minus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 40191 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 40132
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 40131 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 40072
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 40071 ccaacaaatgacat 40058
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1026E06
Length = 162784
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 110649 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 110708
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 110709 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 110768
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 110769 ccaacaaatgacat 110782
>gb|CH401210.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000047 genomic
scaffold, whole genome shotgun sequence
Length = 2656042
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 1819403 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 1819462
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 1819463 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 1819522
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 1819523 ccaacaaatgacat 1819536
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 10427055 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 10427114
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 10427115 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 10427174
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 10427175 ccaacaaatgacat 10427188
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 131 bits (66), Expect = 7e-028
Identities = 117/134 (87%)
Strand = Plus / Plus
Query: 579 cctttgaatggtgtcttgccgaagagaagctcatacaagaatatgccaaatgtccaccag 638
|||||||| ||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 10534035 cctttgaaaggtgtttttccaaacagaagctcatacaagaatatgccaaaggtccaccag 10534094
Query: 639 tctacagcacttccatgcccctcgccctttataatttcaggtgccaagtactcatgggtg 698
|| || ||||| ||||| |||||||| || ||||| ||||| |||||||||||||| ||
Sbjct: 10534095 tcaacggcactaccatgaccctcgcctttgataatctcaggggccaagtactcatgtgta 10534154
Query: 699 ccaacaaaagacat 712
|||||||| |||||
Sbjct: 10534155 ccaacaaatgacat 10534168
>gb|C22455.1|C22455 C22455 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C62806_2A, mRNA sequence
Length = 400
Score = 127 bits (64), Expect = 1e-026
Identities = 153/182 (84%), Gaps = 3/182 (1%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 255 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 196
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 195 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 136
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 135 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 76
Query: 444 ta 445
||
Sbjct: 75 ta 74
>gb|C97780.1|C97780 C97780 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62806_3Z, mRNA sequence
Length = 461
Score = 127 bits (64), Expect = 1e-026
Identities = 153/182 (84%), Gaps = 3/182 (1%)
Strand = Plus / Minus
Query: 267 aattcaagataat---ctgagcctttctcagcggctgatgtagccttctggcttgatgaa 323
||||||||||||| |||| ||||||||||| | || ||||||||| || || | |||
Sbjct: 316 aattcaagataattgtctgaacctttctcagcagttgttgtagccttttgactggttgag 257
Query: 324 gctacagaacgagggatctcaactggcttggggatatcaggtggagtggcacacctgatt 383
||||| || | ||||||||||||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 256 gctactgacctagggatctcaactggcttgggaatatctggaggagttgcacaccttatc 197
Query: 384 aatgcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgctta 443
|| ||||| |||||||||||||| || || || || ||||||||||| ||||||||||||
Sbjct: 196 aaggcccagttaacaccttcaaaaaagggatgttgctttatttctgtcgctccacgctta 137
Query: 444 ta 445
||
Sbjct: 136 ta 135
>dbj|AK103656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135F07, full
insert sequence
Length = 2455
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
||||||| |||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 1811 tcatacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttg 1752
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtc 728
|| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |||
Sbjct: 1751 atgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtc 1692
Query: 729 ggctc 733
|||||
Sbjct: 1691 ggctc 1687
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0686H11
Length = 135273
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
||||||| |||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 9821 tcatacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttg 9762
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtc 728
|| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |||
Sbjct: 9761 atgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtc 9702
Query: 729 ggctc 733
|||||
Sbjct: 9701 ggctc 9697
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0605H02
Length = 175547
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
||||||| |||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 135856 tcatacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttg 135797
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtc 728
|| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |||
Sbjct: 135796 atgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtc 135737
Query: 729 ggctc 733
|||||
Sbjct: 135736 ggctc 135732
>ref|XM_483096.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2455
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
||||||| |||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 1811 tcatacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttg 1752
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtc 728
|| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |||
Sbjct: 1751 atgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtc 1692
Query: 729 ggctc 733
|||||
Sbjct: 1691 ggctc 1687
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
||||||| |||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 24031430 tcatacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttg 24031371
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtc 728
|| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |||
Sbjct: 24031370 atgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtc 24031311
Query: 729 ggctc 733
|||||
Sbjct: 24031310 ggctc 24031306
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 609 tcatacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttt 668
||||||| |||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 24269517 tcatacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttg 24269458
Query: 669 ataatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtc 728
|| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| |||
Sbjct: 24269457 atgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtc 24269398
Query: 729 ggctc 733
|||||
Sbjct: 24269397 ggctc 24269393
>gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018772, whole
genome shotgun sequence
Length = 23644
Score = 111 bits (56), Expect = 7e-022
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 610 catacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttta 669
|||||| |||||||||||| |||||||| || |||||||| || || ||||| ||||| |
Sbjct: 23644 catacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttga 23585
Query: 670 taatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcg 729
| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| ||||
Sbjct: 23584 tgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtcg 23525
Query: 730 gctc 733
||||
Sbjct: 23524 gctc 23521
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 111 bits (56), Expect = 7e-022
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 610 catacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttta 669
|||||| |||||||||||| |||||||| || |||||||| || || ||||| ||||| |
Sbjct: 15500568 catacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttga 15500509
Query: 670 taatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcg 729
| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| ||||
Sbjct: 15500508 tgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtcg 15500449
Query: 730 gctc 733
||||
Sbjct: 15500448 gctc 15500445
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 111 bits (56), Expect = 7e-022
Identities = 107/124 (86%)
Strand = Plus / Minus
Query: 610 catacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgcccttta 669
|||||| |||||||||||| |||||||| || |||||||| || || ||||| ||||| |
Sbjct: 23102574 catacaggaatatgccaaaggtccaccaatccacagcactgccgtgaccctctcccttga 23102515
Query: 670 taatttcaggtgccaagtactcatgggtgccaacaaaagacatagaccttgcatctgtcg 729
| ||||| ||||||||||||||||| ||||||||||| ||||| |||| ||||| ||||
Sbjct: 23102514 tgatttctggtgccaagtactcatgagtgccaacaaaggacatggaccgagcatcagtcg 23102455
Query: 730 gctc 733
||||
Sbjct: 23102454 gctc 23102451
>dbj|AK065888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J15, full
insert sequence
Length = 2181
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 1718 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 1659
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 1658 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 1599
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 1598 atctctggggccaagtactcatgtgttccaacaaatgacat 1558
>gb|AACV01005319.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005319, whole
genome shotgun sequence
Length = 20741
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Plus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 12791 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 12850
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 12851 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 12910
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 12911 atctctggggccaagtactcatgtgttccaacaaatgacat 12951
>ref|XM_467557.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2182
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 1719 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 1660
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 1659 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 1600
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 1599 atctctggggccaagtactcatgtgttccaacaaatgacat 1559
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 5321686 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 5321627
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 5321626 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 5321567
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 5321566 atctctggggccaagtactcatgtgttccaacaaatgacat 5321526
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1124_G07
Length = 93240
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 29391 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 29332
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 29331 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 29272
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 29271 atctctggggccaagtactcatgtgttccaacaaatgacat 29231
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0685G12
Length = 149155
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 136284 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 136225
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 136224 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 136165
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 136164 atctctggggccaagtactcatgtgttccaacaaatgacat 136124
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 16651668 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 16651609
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 16651608 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 16651549
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 16651548 atctctggggccaagtactcatgtgttccaacaaatgacat 16651508
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 30104732 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 30104673
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 30104672 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 30104613
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 30104612 atctctggggccaagtactcatgtgttccaacaaatgacat 30104572
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 105 bits (53), Expect = 4e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 552 ttgaacaatgtcgccctattcccagaacctttgaatggtgtcttgccgaagagaagctca 611
||||||| ||| ||||| || ||||| || |||||||||||||| || || ||||| |||
Sbjct: 30156687 ttgaacagtgttgccctgttgccagagcccttgaatggtgtctttccaaacagaagttca 30156628
Query: 612 tacaagaatatgccaaatgtccaccagtctacagcacttccatgcccctcgccctttata 671
||||||||||| || || |||||||| || ||||| || ||||| |||||||| || ||
Sbjct: 30156627 tacaagaatatcccgaaggtccaccaatcgacagcgctaccatggccctcgcctttgatg 30156568
Query: 672 atttcaggtgccaagtactcatgggtgccaacaaaagacat 712
|| || || |||||||||||||| || |||||||| |||||
Sbjct: 30156567 atctctggggccaagtactcatgtgttccaacaaatgacat 30156527
>gb|D15569.1|D15569 RICC0846A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0846A, mRNA sequence
Length = 328
Score = 95.6 bits (48), Expect = 4e-017
Identities = 200/251 (79%)
Strand = Plus / Minus
Query: 387 gcccaattaacaccttcaaagaacgggtgctgttttatttctgtggctccacgcttatac 446
||||| || ||||| |||||||| || ||||||||||| || || || |||||||| ||
Sbjct: 266 gcccagttgacaccctcaaagaatggatgctgttttatctcagtagccccacgcttgtag 207
Query: 447 gctaatcgatgctgaggttccttgatgagcaatcccctaataagatcccttgcagcaaaa 506
| | ||| |||||||| ||||||| ||||||||||| || | |||||||| | ||
Sbjct: 206 ccaagtcggtgctgagggtccttgaccagcaatccccttatcatgtcccttgccgagaag 147
Query: 507 ctcactacaggtgattctgggaaccttaagggttgtccaactacgttgaacaatgtcgcc 566
||||||| || ||||||||||||| ||||| || ||||| | ||||| | |||||
Sbjct: 146 ctcactattggggattctgggaaccgcaagggctggccaacganattgaagagcgtcgct 87
Query: 567 ctattcccagaacctttgaatggtgtcttgccgaagagaagctcatacaagaatatgcca 626
| ||| || ||||| ||||| || |||||||| || | |||||||||||||||||||||
Sbjct: 86 cgattgcctgaacccttgaaaggggtcttgccaaacaatagctcatacaagaatatgcca 27
Query: 627 aatgtccacca 637
|| ||||||||
Sbjct: 26 aaggtccacca 16
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,239,705
Number of Sequences: 438736
Number of extensions: 1239705
Number of successful extensions: 6695
Number of sequences better than 0.5: 70
Number of HSP's better than 0.5 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6233
Number of HSP's gapped (non-prelim): 454
length of query: 936
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 915
effective length of database: 2,791,206,460
effective search space: 2553953910900
effective search space used: 2553953910900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)