BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.288
(1775 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA 1181 0.0
ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-... 1181 0.0
dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA... 1174 0.0
dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA... 1166 0.0
gb|CB000642.1|CB000642 S345Q_H05 Rice cold stress germinati... 640 0.0
gb|CF303802.1|CF303802 ABF1--03-E03.g1 ABF3-overexpressing ... 611 e-172
gb|CA998282.1|CA998282 S345B_E07 Rice cold stress germinati... 563 e-157
gb|CB651081.1|CB651081 OSJNEb15O11.r OSJNEb Oryza sativa (j... 515 e-143
gb|CF322881.1|CF322881 HDN--02-F07.g1 OsHDAC1-overexpressin... 509 e-141
gb|CF304154.1|CF304154 ABF1--04-D12.g1 ABF3-overexpressing ... 470 e-129
gb|CF324849.1|CF324849 JMT1--01-K06.g1 AtJMT-overexpressing... 446 e-122
gb|CF323824.1|CF323824 HDN--04-N22.g1 OsHDAC1-overexpressin... 444 e-122
gb|CA999345.1|CA999345 S234G_E07 Rice cold stress germinati... 428 e-117
gb|AU096735.1|AU096735 AU096735 Rice green shoot Oryza sati... 406 e-110
gb|CA999716.1|CA999716 S234I_D09 Rice cold stress germinati... 365 5e-098
gb|AU063380.2|AU063380 AU063380 Rice callus Oryza sativa (j... 313 2e-082
gb|D41490.1|D41490 RICS4019A Rice shoot Oryza sativa (japon... 258 9e-066
dbj|AP003748.4| Oryza sativa (japonica cultivar-group) geno... 246 4e-062
gb|AACV01015404.1| Oryza sativa (japonica cultivar-group) c... 246 4e-062
gb|AACV01015405.1| Oryza sativa (japonica cultivar-group) c... 246 4e-062
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 246 4e-062
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 246 4e-062
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 246 4e-062
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 246 4e-062
gb|D40902.1|D40902 RICS3087A Rice shoot Oryza sativa (japon... 238 9e-060
gb|AZ134503.1|AZ134503 OSJNBb0112M04f CUGI Rice BAC Library... 228 8e-057
gb|AU096734.1|AU096734 AU096734 Rice green shoot Oryza sati... 228 8e-057
gb|AQ579392.1|AQ579392 nbxb0084G04r CUGI Rice BAC Library O... 131 1e-027
gb|AQ287533.1|AQ287533 nbxb0030O06r CUGI Rice BAC Library O... 101 1e-018
gb|AQ365660.2|AQ365660 nbxb0064A08f CUGI Rice BAC Library O... 101 1e-018
gb|D39497.1|D39497 RICS0874A Rice shoot Oryza sativa (japon... 82 1e-012
gb|AU077998.1|AU077998 AU077998 Oryza sativa Ariete seed Or... 72 1e-009
gb|AU161286.1|AU161286 AU161286 Rice callus Oryza sativa (j... 72 1e-009
gb|AU077999.1|AU077999 AU077999 Oryza sativa Ariete seed Or... 50 0.004
dbj|AK122005.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC O... 50 0.004
gb|AC123516.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 50 0.004
gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CB647699.1|CB647699 OSJNEb10L19.f OSJNEb Oryza sativa (j... 46 0.065
dbj|AK068415.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.065
dbj|AK098929.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.065
gb|AC134926.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.065
gb|AACV01023263.1| Oryza sativa (japonica cultivar-group) c... 46 0.065
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.065
gb|CF300726.1|CF300726 7LEAF--05-F01.b1 Rice leaf plasmid c... 44 0.26
>ref|XM_477102.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1570
Score = 1181 bits (596), Expect = 0.0
Identities = 1052/1204 (87%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 158 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 217
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 218 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 277
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccacaccacgttttggtggatcag 360
|||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 278 agtacctctacgacggcctcgtcctcttcgccccctccaccccgcgttttggaggatcag 337
Query: 361 tggaccagaacgcagtcctcgaatttattgatgctgggcatgacatgatcctggcggcag 420
||||||| || || | || ||||| || |||||||| ||||| ||||||||||| ||||
Sbjct: 338 tggaccaaaattcaattctggaattcatcgatgctggtcatgatatgatcctggcagcag 397
Query: 421 attcctctgcctctgatctcattcgtggcattgcaacagagtgtggggttgattttgatg 480
| || || ||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 398 actcttcggcctctgatcttatccgaggcattgcaacagagtgtggggttgattttgatg 457
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 458 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 517
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtctgaaa 600
|||| || |||||||||||||| || || ||||| || ||||||||||| ||||| | |
Sbjct: 518 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtcaaaga 577
Query: 601 agattgaggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtt 660
| |||||||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |
Sbjct: 578 aaattgaggcccctgtattatttcggggaattggacatgcggttaatccatctaacagct 637
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaagactaagt 720
|||| ||||| || |||| |||||||| |||||||| ||||| || |||||| ||||||
Sbjct: 638 tggtcctgaaagtcttatccgcctctccgtcagcatactcagcaaacccaaagtctaagt 697
Query: 721 tagcgtctcctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaa 780
| || || |||||||| ||||| ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 698 tggcttcccctccatctctcacagggtcggctatatcactggtttctgttatgcaggcaa 757
Query: 781 gaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaaccggttcctga 840
|||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 758 gaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaacaggttcctaa 817
Query: 841 agtctggtgttcaaaaggctgatagcaaaacaagatatgagagagctggaaacgagcaat 900
| ||||||||||| ||||| | |||||| | ||| |||||| ||||||||| || ||||
Sbjct: 818 aatctggtgttcagaaggccggtagcaagataaggcatgagaaagctggaaatgaacaat 877
Query: 901 ttgtggcagagataagcaaatgggttttccatgagaggggacatctaaaggctgttaatg 960
||||| |||| | |||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 878 ttgtgacagaaacaagcaaatgggtcttccatgagaggggccatctaaaggcagtgaatg 937
Query: 961 ttaggcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgacc 1020
| | |||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 938 tcaagcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgact 997
Query: 1021 tggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctg 1080
|||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 998 tggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctg 1057
Query: 1081 atgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactg 1140
||||||| || |||| |||| ||||||||||||||| |||||||| || |||||||||
Sbjct: 1058 atgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactg 1117
Query: 1141 acaacaagggtttgtattcaacaaccttcaaagttccagatgtttatggagttttccagt 1200
|||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1118 acaagaagggtgtattttcaacatccttcaaagttccagatgtttatggagttttccagt 1177
Query: 1201 tcaaagttgagtaccaaagactgggatatactggtctgtcttttacaaagcagattccag 1260
|||||||||||||||| || || |||||||||||||| ||| || | |||||||||||||
Sbjct: 1178 tcaaagttgagtaccagaggcttggatatactggtctctctctttctaagcagattccag 1237
Query: 1261 tacgtccttacagacataatgagtatgagagattcataacatcagcgtacccatactaca 1320
| || |||||||| |||||||||||||| ||||||||||| || || || || |||||
Sbjct: 1238 tgcgcccttacaggcataatgagtatgaaagattcataacttcggcatatccgtactatg 1297
Query: 1321 ccgcctcattttcaacaatgggtgctttcttcgtattctcgtttgtgtacctgtaccaca 1380
| || || |||||||||||||| || |||||| | ||||| |||||||||||||||||||
Sbjct: 1298 ctgcgtcgttttcaacaatgggagccttcttcatcttctcatttgtgtacctgtaccaca 1357
Query: 1381 aata 1384
||||
Sbjct: 1358 aata 1361
>ref|XM_506221.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_A05.4 mRNA
Length = 1648
Score = 1181 bits (596), Expect = 0.0
Identities = 1052/1204 (87%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 165 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 224
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 225 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 284
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccacaccacgttttggtggatcag 360
|||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 285 agtacctctacgacggcctcgtcctcttcgccccctccaccccgcgttttggaggatcag 344
Query: 361 tggaccagaacgcagtcctcgaatttattgatgctgggcatgacatgatcctggcggcag 420
||||||| || || | || ||||| || |||||||| ||||| ||||||||||| ||||
Sbjct: 345 tggaccaaaattcaattctggaattcatcgatgctggtcatgatatgatcctggcagcag 404
Query: 421 attcctctgcctctgatctcattcgtggcattgcaacagagtgtggggttgattttgatg 480
| || || ||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 405 actcttcggcctctgatcttatccgaggcattgcaacagagtgtggggttgattttgatg 464
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 465 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 524
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtctgaaa 600
|||| || |||||||||||||| || || ||||| || ||||||||||| ||||| | |
Sbjct: 525 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtcaaaga 584
Query: 601 agattgaggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtt 660
| |||||||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |
Sbjct: 585 aaattgaggcccctgtattatttcggggaattggacatgcggttaatccatctaacagct 644
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaagactaagt 720
|||| ||||| || |||| |||||||| |||||||| ||||| || |||||| ||||||
Sbjct: 645 tggtcctgaaagtcttatccgcctctccgtcagcatactcagcaaacccaaagtctaagt 704
Query: 721 tagcgtctcctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaa 780
| || || |||||||| ||||| ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 705 tggcttcccctccatctctcacagggtcggctatatcactggtttctgttatgcaggcaa 764
Query: 781 gaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaaccggttcctga 840
|||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 765 gaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaacaggttcctaa 824
Query: 841 agtctggtgttcaaaaggctgatagcaaaacaagatatgagagagctggaaacgagcaat 900
| ||||||||||| ||||| | |||||| | ||| |||||| ||||||||| || ||||
Sbjct: 825 aatctggtgttcagaaggccggtagcaagataaggcatgagaaagctggaaatgaacaat 884
Query: 901 ttgtggcagagataagcaaatgggttttccatgagaggggacatctaaaggctgttaatg 960
||||| |||| | |||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 885 ttgtgacagaaacaagcaaatgggtcttccatgagaggggccatctaaaggcagtgaatg 944
Query: 961 ttaggcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgacc 1020
| | |||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 945 tcaagcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgact 1004
Query: 1021 tggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctg 1080
|||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 1005 tggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctg 1064
Query: 1081 atgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactg 1140
||||||| || |||| |||| ||||||||||||||| |||||||| || |||||||||
Sbjct: 1065 atgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactg 1124
Query: 1141 acaacaagggtttgtattcaacaaccttcaaagttccagatgtttatggagttttccagt 1200
|||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1125 acaagaagggtgtattttcaacatccttcaaagttccagatgtttatggagttttccagt 1184
Query: 1201 tcaaagttgagtaccaaagactgggatatactggtctgtcttttacaaagcagattccag 1260
|||||||||||||||| || || |||||||||||||| ||| || | |||||||||||||
Sbjct: 1185 tcaaagttgagtaccagaggcttggatatactggtctctctctttctaagcagattccag 1244
Query: 1261 tacgtccttacagacataatgagtatgagagattcataacatcagcgtacccatactaca 1320
| || |||||||| |||||||||||||| ||||||||||| || || || || |||||
Sbjct: 1245 tgcgcccttacaggcataatgagtatgaaagattcataacttcggcatatccgtactatg 1304
Query: 1321 ccgcctcattttcaacaatgggtgctttcttcgtattctcgtttgtgtacctgtaccaca 1380
| || || |||||||||||||| || |||||| | ||||| |||||||||||||||||||
Sbjct: 1305 ctgcgtcgttttcaacaatgggagccttcttcatcttctcatttgtgtacctgtaccaca 1364
Query: 1381 aata 1384
||||
Sbjct: 1365 aata 1368
>dbj|AK059111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E02, full
insert sequence
Length = 1648
Score = 1174 bits (592), Expect = 0.0
Identities = 1051/1204 (87%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 165 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 224
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 225 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 284
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccacaccacgttttggtggatcag 360
|||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 285 agtacctctacgacggcctcgtcctcttcgccccctccaccccgcgttttggaggatcag 344
Query: 361 tggaccagaacgcagtcctcgaatttattgatgctgggcatgacatgatcctggcggcag 420
||||||| || || | || ||||| || |||||||| ||||| ||||||||||| ||||
Sbjct: 345 tggaccaaaattcaattctggaattcatcgatgctggtcatgatatgatcctggcagcag 404
Query: 421 attcctctgcctctgatctcattcgtggcattgcaacagagtgtggggttgattttgatg 480
| || || ||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 405 actcttcggcctctgatcttatccgaggcattgcaacagagtgtggggttgattttgatg 464
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 465 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 524
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtctgaaa 600
|||| || |||||||||||||| || || ||||| || ||||||||||| ||||| | |
Sbjct: 525 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtcaaaga 584
Query: 601 agattgaggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtt 660
| |||||||| |||||||| ||||| || |||||||| || ||||||||| ||||| |
Sbjct: 585 aaattgaggcccctgtattatttcggggtattggacatgcggttaatccatctaacagct 644
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaagactaagt 720
|||| ||||| || |||| |||||||| |||||||| ||||| || |||||| ||||||
Sbjct: 645 tggtcctgaaagtcttatccgcctctccgtcagcatactcagcaaacccaaagtctaagt 704
Query: 721 tagcgtctcctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaa 780
| || || |||||||| ||||| ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 705 tggcttcccctccatctctcacagggtcggctatatcactggtttctgttatgcaggcaa 764
Query: 781 gaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaaccggttcctga 840
|||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 765 gaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaacaggttcctaa 824
Query: 841 agtctggtgttcaaaaggctgatagcaaaacaagatatgagagagctggaaacgagcaat 900
| ||||||||||| ||||| | |||||| | ||| |||||| ||||||||| || ||||
Sbjct: 825 aatctggtgttcagaaggccggtagcaagataaggcatgagaaagctggaaatgaacaat 884
Query: 901 ttgtggcagagataagcaaatgggttttccatgagaggggacatctaaaggctgttaatg 960
||||| |||| | |||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 885 ttgtgacagaaacaagcaaatgggtcttccatgagaggggccatctaaaggcagtgaatg 944
Query: 961 ttaggcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgacc 1020
| | |||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 945 tcaagcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgact 1004
Query: 1021 tggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctg 1080
|||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 1005 tggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctg 1064
Query: 1081 atgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactg 1140
||||||| || |||| |||| ||||||||||||||| |||||||| || |||||||||
Sbjct: 1065 atgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactg 1124
Query: 1141 acaacaagggtttgtattcaacaaccttcaaagttccagatgtttatggagttttccagt 1200
|||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1125 acaagaagggtgtattttcaacatccttcaaagttccagatgtttatggagttttccagt 1184
Query: 1201 tcaaagttgagtaccaaagactgggatatactggtctgtcttttacaaagcagattccag 1260
|||||||||||||||| || || |||||||||||||| ||| || | |||||||||||||
Sbjct: 1185 tcaaagttgagtaccagaggcttggatatactggtctctctctttctaagcagattccag 1244
Query: 1261 tacgtccttacagacataatgagtatgagagattcataacatcagcgtacccatactaca 1320
| || |||||||| |||||||||||||| ||||||||||| || || || || |||||
Sbjct: 1245 tgcgcccttacaggcataatgagtatgaaagattcataacttcggcatatccgtactatg 1304
Query: 1321 ccgcctcattttcaacaatgggtgctttcttcgtattctcgtttgtgtacctgtaccaca 1380
| || || |||||||||||||| || |||||| | ||||| |||||||||||||||||||
Sbjct: 1305 ctgcgtcgttttcaacaatgggagccttcttcatcttctcatttgtgtacctgtaccaca 1364
Query: 1381 aata 1384
||||
Sbjct: 1365 aata 1368
>dbj|AK099319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003F07, full
insert sequence
Length = 1570
Score = 1166 bits (588), Expect = 0.0
Identities = 1050/1204 (87%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 158 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 217
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 218 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 277
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccacaccacgttttggtggatcag 360
|||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 278 agtacctctacgacggcctcgtcctcttcgccccctccaccccgcgttttggaggatcag 337
Query: 361 tggaccagaacgcagtcctcgaatttattgatgctgggcatgacatgatcctggcggcag 420
||||||| | || | || ||||| || |||||||| ||||| ||||||||||| ||||
Sbjct: 338 tggaccaaagttcaattctggaattcatcgatgctggtcatgatatgatcctggcagcag 397
Query: 421 attcctctgcctctgatctcattcgtggcattgcaacagagtgtggggttgattttgatg 480
| || || ||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 398 actcttcggcctctgatcttatccgaggcattgcaacagagtgtggggttgattttgatg 457
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 458 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 517
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtctgaaa 600
|||| || |||||||||||||| || || ||||| || ||||||||||| ||||| | |
Sbjct: 518 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtcaaaga 577
Query: 601 agattgaggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtt 660
| |||||||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |
Sbjct: 578 aaattgaggcccctgtattatttcggggaattggacatgcggttaatccatctaacagct 637
Query: 661 tggttctgaaggttctatcagcctctccatcagcatattcagctaatccaaagactaagt 720
|||| ||||| || |||| |||||||| |||||||| ||||| || |||||| ||||||
Sbjct: 638 tggtcctgaaagtcttatccgcctctccgtcagcatactcagcaaacccaaagtctaagt 697
Query: 721 tagcgtctcctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaa 780
| || || |||||||| ||||| ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 698 tggcttcccctccatctctcacagggtcggctatatcactggtttctgttatgcaggcaa 757
Query: 781 gaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaaccggttcctga 840
|||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 758 gaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaacaggttcctaa 817
Query: 841 agtctggtgttcaaaaggctgatagcaaaacaagatatgagagagctggaaacgagcaat 900
| ||||||||||| ||||| | |||||| | ||| |||||| ||||||||| || ||||
Sbjct: 818 aatctggtgttcagaaggccggtagcaagataaggcatgagaaagctggaaatgaacaat 877
Query: 901 ttgtggcagagataagcaaatgggttttccatgagaggggacatctaaaggctgttaatg 960
||||| |||| | |||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct: 878 ttgtgacagaaacaagcaaatgggtcttccatgagaggggccatctaaaggcagtgaatg 937
Query: 961 ttaggcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgacc 1020
| | |||| |||||||||||||||| ||||| || |||||| ||||||| |||||||||
Sbjct: 938 tcaagcataacaaggttggggagacaaatgagcctggcatgcaccgcatcaatgatgact 997
Query: 1021 tggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctg 1080
|||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||
Sbjct: 998 tggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctg 1057
Query: 1081 atgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactg 1140
||||||| || |||| |||| ||||||||||||||| |||||||| || |||||||||
Sbjct: 1058 atgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactg 1117
Query: 1141 acaacaagggtttgtattcaacaaccttcaaagttccagatgtttatggagttttccagt 1200
|||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1118 acaagaagggtgtattttcaacatccttcaaagttccagatgtttatggagttttccagt 1177
Query: 1201 tcaaagttgagtaccaaagactgggatatactggtctgtcttttacaaagcagattccag 1260
|||||||||||||||| || || |||||||||||||| ||| || | |||||||||||||
Sbjct: 1178 tcaaagttgagtaccagaggcttggatatactggtctctctctttctaagcagattccag 1237
Query: 1261 tacgtccttacagacataatgagtatgagagattcataacatcagcgtacccatactaca 1320
| || |||||||| |||||||||||||| ||||||||||| || || || || |||||
Sbjct: 1238 tgcgcccttacaggcataatgagtatgaaagattcataacttcggcatatccgtactatg 1297
Query: 1321 ccgcctcattttcaacaatgggtgctttcttcgtattctcgtttgtgtacctgtaccaca 1380
| || || |||||||||||||| || |||||| | ||||| |||||||||||||||||||
Sbjct: 1298 ctgcgtcgttttcaacaatgggagccttcttcatcttctcatttgtgtacctgtaccaca 1357
Query: 1381 aata 1384
||||
Sbjct: 1358 aata 1361
>gb|CB000642.1|CB000642 S345Q_H05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 659
Score = 640 bits (323), Expect = 0.0
Identities = 575/659 (87%)
Strand = Plus / Plus
Query: 627 ggaattggacacatggctaatccatcaaacagtttggttctgaaggttctatcagcctct 686
||||||||||| || ||||||||| ||||| ||||| ||||| || |||| ||||||
Sbjct: 1 ggaattggacatgcggttaatccatctaacagcttggtcctgaaagtcttatccgcctct 60
Query: 687 ccatcagcatattcagctaatccaaagactaagttagcgtctcctccatcgctcactggg 746
|| |||||||| ||||| || |||||| ||||||| || || |||||||| ||||| |||
Sbjct: 61 ccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccatctctcacaggg 120
Query: 747 tcagctatatcattggtttcggttatgcaggcaagaaataatgctcgggtgctgttatct 806
|| ||||||||| ||||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct: 121 tcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgggtcttgatatct 180
Query: 807 ggatcactcgatctgtttagcaaccggttcctgaagtctggtgttcaaaaggctgatagc 866
|||||||||||||||||||||||| ||||||| || ||||||||||| ||||| | ||||
Sbjct: 181 ggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcagaaggccggtagc 240
Query: 867 aaaacaagatatgagagagctggaaacgagcaatttgtggcagagataagcaaatgggtt 926
|| | ||| |||||| ||||||||| || ||||||||| |||| | ||||||||||||
Sbjct: 241 aagataaggcatgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtc 300
Query: 927 ttccatgagaggggacatctaaaggctgttaatgttaggcatcacaaggttggggagacc 986
|||||||||||||| ||||||||||| || ||||| | |||| ||||||||||||||||
Sbjct: 301 ttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaaggttggggagaca 360
Query: 987 aatgaaccaggcatgtaccgcattaatgatgacctggaatactctgttgagatctatgaa 1046
||||| || |||||||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 361 aatgagcctggcatgtaccgcatcaatgatgacttggaatactctgttgagatctacgaa 420
Query: 1047 tggtccggaacaagctggaagccgtatgttgctgatgatgtgcagcttcaatttttcatg 1106
||||| || || ||||||||||||||||||||||||||||| || |||| |||| ||||
Sbjct: 421 tggtctgggaccagctggaagccgtatgttgctgatgatgttcaagttcagttttacatg 480
Query: 1107 atgagcccttacgttctgaaaactatgtcgactgacaacaagggtttgtattcaacaacc 1166
||||||||||| |||||||| || ||||||||||||| |||||| | | ||||||| ||
Sbjct: 481 atgagcccttatgttctgaagacactgtcgactgacaagaagggtgtattttcaacatcc 540
Query: 1167 ttcaaagttccagatgtttatggagttttccagttcaaagttgagtaccaaagactggga 1226
|||||||||||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct: 541 ttcaaagttccagatgtttatggagttttccagttcaaagttgagtaccagaggcttgga 600
Query: 1227 tatactggtctgtcttttacaaagcagattccagtacgtccttacagacataatgagta 1285
||||||||||| ||| || | |||||||||||||| || |||||||| |||||||||||
Sbjct: 601 tatactggtctctctctttctaagcagattccagtgcgcccttacaggcataatgagta 659
>gb|CF303802.1|CF303802 ABF1--03-E03.g1 ABF3-overexpressing transgenic rice lambda phage cDNA
library (ABF1) Oryza sativa (japonica cultivar-group)
cDNA clone ABF1--03-E03, mRNA sequence
Length = 681
Score = 611 bits (308), Expect = e-172
Identities = 549/627 (87%), Gaps = 2/627 (0%)
Strand = Plus / Plus
Query: 760 tggtttcggttatgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatc 819
||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 10 tggtttctgttatgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatc 69
Query: 820 tgtttagcaaccggttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatg 879
||||||||||| ||||||| || ||||||||||| ||||| | |||||| | ||| |||
Sbjct: 70 tgtttagcaacaggttcctaaaatctggtgttcagaaggccggtagcaagataaggcatg 129
Query: 880 agagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgagaggg 939
||| ||||||||| || ||||||||| |||| | |||||||||||| |||||||||||||
Sbjct: 130 agaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgagaggg 189
Query: 940 gacatctaaaggctgttaatgttaggcatcacaaggttggggagaccaatgaaccaggca 999
| ||||||||||| || ||||| | |||| |||||||||||||||| ||||| || ||||
Sbjct: 190 gccatctaaaggcagtgaatgtcaagcataacaaggttggggagacaaatgagcctggca 249
Query: 1000 tgtaccgcattaatgatgacctggaatactctgttgagatctatgaatggtccggaacaa 1059
|||||||||| ||||||||| |||||||||||||||||||||| |||||||| || ||||
Sbjct: 250 tgtaccgcatcaatgatgacttggaatactctgttgagatctacgaatggtctgggacaa 309
Query: 1060 gctggaagccgtatgttgctgatgatgtgcagcttcaatttttcatgatgagcccttacg 1119
|||||||||||||||||||||||||||| || |||| |||| ||||||||||||||| |
Sbjct: 310 gctggaagccgtatgttgctgatgatgttcaagttcagttttacatgatgagcccttatg 369
Query: 1120 ttctgaaaactatgtcgactgacaacaagggtttgtattcaacaaccttcaaagttccag 1179
||||||| || ||||||||||||| |||||| | | ||||||| |||||||||||||||
Sbjct: 370 ttctgaagacactgtcgactgacaagaagggtgtattttcaacatccttcaaagttccag 429
Query: 1180 atgtttat-ggagttttccagttcaaagttgagtaccaaagactgggatatactggtctg 1238
|||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 430 atgtttatnggagttttccagttcaaagttgagtaccagaggcttggatatactggtctc 489
Query: 1239 tcttttacaaagcagattccagtacgtccttacagacataatgagtatgagagattcata 1298
||| || | |||||||||||||| || |||||||| |||||||||||||| |||||||||
Sbjct: 490 tctctttctaagcagattccagtgcgcccttacaggcataatgagtatgaaagattcata 549
Query: 1299 acatcagcgtacccatactacacc-gcctcattttcaacaatgggtgctttcttcgtatt 1357
|| || || || || ||||| | || || |||||||||||||| || |||||| | ||
Sbjct: 550 acttcggcatatccgtactatgcntgcgtcgttttcaacaatgggagccttcttcatctt 609
Query: 1358 ctcgtttgtgtacctgtaccacaaata 1384
||| |||||||||||||||||||||||
Sbjct: 610 ctcatttgtgtacctgtaccacaaata 636
>gb|CA998282.1|CA998282 S345B_E07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 652
Score = 563 bits (284), Expect = e-157
Identities = 560/652 (85%)
Strand = Plus / Plus
Query: 490 aggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtgatcacacct 549
|||||||||||||||| || || || ||||| | ||| |||| |||||||||||| || |
Sbjct: 1 aggcaatggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactt 60
Query: 550 tgattgctggtgacgatcttatccattcggatgtgatactagggtctgaaaagattgagg 609
||||||||||||| || || ||||| || ||||||||||| ||||| | || |||||||
Sbjct: 61 tgattgctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgagg 120
Query: 610 ctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggttctga 669
| |||||||| ||||| ||||||||||| || ||||||||| ||||| ||||| ||||
Sbjct: 121 cccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggtcctga 180
Query: 670 aggttctatcagcctctccatcagcatattcagctaatccaaagactaagttagcgtctc 729
| || |||| |||||||| |||||||| ||||| || |||||| ||||||| || || |
Sbjct: 181 aagtcttatccgcctctccgtcagcatactcagcaaacccaaagtctaagttggcttccc 240
Query: 730 ctccatcgctcactgggtcagctatatcattggtttcggttatgcaggcaagaaataatg 789
||||||| ||||| ||||| ||||||||| ||||||| ||||||||||||||||| ||||
Sbjct: 241 ctccatctctcacagggtcggctatatcactggtttctgttatgcaggcaagaaacaatg 300
Query: 790 ctcgggtgctgttatctggatcactcgatctgtttagcaaccggttcctgaagtctggtg 849
||||||| || ||||||||||||||||||||||||||||| ||||||| || |||||||
Sbjct: 301 ctcgggtcttgatatctggatcactcgatctgtttagcaacaggttcctaaaatctggtg 360
Query: 850 ttcaaaaggctgatagcaaaacaagatatgagagagctggaaacgagcaatttgtggcag 909
|||| ||||| | |||||| | ||| |||||| ||||||||| || ||||||||| |||
Sbjct: 361 ttcagaaggccggtagcaagataaggcatgagaaagctggaaatgaacaatttgtgacag 420
Query: 910 agataagcaaatgggttttccatgagaggggacatctaaaggctgttaatgttaggcatc 969
| | |||||||||||| |||||||||||||| ||||||||||| || ||||| | ||||
Sbjct: 421 aaacaagcaaatgggtcttccatgagaggggccatctaaaggcagtgaatgtcaagcata 480
Query: 970 acaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgacctggaatact 1029
|||||||||||||||| ||||| || |||||||||||||| ||||||||| |||||||||
Sbjct: 481 acaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgacttggaatact 540
Query: 1030 ctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctgatgatgtgc 1089
||||||||||||| |||||||| || || ||||||||||||||||||||||||||||| |
Sbjct: 541 ctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctgatgatgttc 600
Query: 1090 agcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
| |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 601 aagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 652
>gb|CB651081.1|CB651081 OSJNEb15O11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15O11 3', mRNA sequence
Length = 821
Score = 515 bits (260), Expect = e-143
Identities = 446/508 (87%)
Strand = Plus / Minus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 800 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 741
Query: 937 ggggacatctaaaggctgttaatgttaggcatcacaaggttggggagaccaatgaaccag 996
|||| ||||||||||| || ||||| | |||| |||||||||||||||| ||||| || |
Sbjct: 740 ggggccatctaaaggcagtgaatgtcaagcataacaaggttggggagacaaatgagcctg 681
Query: 997 gcatgtaccgcattaatgatgacctggaatactctgttgagatctatgaatggtccggaa 1056
||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| || |
Sbjct: 680 gcatgtaccgcatcaatgatgacttggaatactctgttgagatctacgaatggtctggga 621
Query: 1057 caagctggaagccgtatgttgctgatgatgtgcagcttcaatttttcatgatgagccctt 1116
| ||||||||||||||||||||||||||||| || |||| |||| ||||||||||||||
Sbjct: 620 ccagctggaagccgtatgttgctgatgatgttcaagttcagttttacatgatgagccctt 561
Query: 1117 acgttctgaaaactatgtcgactgacaacaagggtttgtattcaacaaccttcaaagttc 1176
| |||||||| || ||||||||||||| |||||| | | ||||||| ||||||||||||
Sbjct: 560 atgttctgaagacactgtcgactgacaagaagggtgtattttcaacatccttcaaagttc 501
Query: 1177 cagatgtttatggagttttccagttcaaagttgagtaccaaagactgggatatactggtc 1236
|||||||||||||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 500 cagatgtttatggagttttccagttcaaagttgagtaccagaggcttggatatactggtc 441
Query: 1237 tgtcttttacaaagcagattccagtacgtccttacagacataatgagtatgagagattca 1296
| ||| || | |||||||||||||| || |||||||| |||||||||||||| |||||||
Sbjct: 440 tctctctttctaagcagattccagtgcgcccttacaggcataatgagtatgaaagattca 381
Query: 1297 taacatcagcgtacccatactacaccgcctcattttcaacaatgggtgctttcttcgtat 1356
|||| || || || || ||||| | || || |||||||||||||| || |||||| | |
Sbjct: 380 taacttcggcatatccgtactatgctgcgtcgttttcaacaatgggagccttcttcatct 321
Query: 1357 tctcgtttgtgtacctgtaccacaaata 1384
|||| |||||||||||||||||||||||
Sbjct: 320 tctcatttgtgtacctgtaccacaaata 293
>gb|CF322881.1|CF322881 HDN--02-F07.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-F07, mRNA sequence
Length = 583
Score = 509 bits (257), Expect = e-141
Identities = 482/557 (86%)
Strand = Plus / Plus
Query: 528 gatgttgaaggtgatcacaccttgattgctggtgacgatcttatccattcggatgtgata 587
|||| |||||||||||| || |||||||||||||| || || ||||| || |||||||||
Sbjct: 27 gatgctgaaggtgatcatactttgattgctggtgatgacctcatccagtcagatgtgata 86
Query: 588 ctagggtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggctaat 647
|| ||||| | || |||||||| |||||||| ||||| ||||||||||| || ||||
Sbjct: 87 ctggggtcaaagaaaattgaggcccctgtattatttcggggaattggacatgcggttaat 146
Query: 648 ccatcaaacagtttggttctgaaggttctatcagcctctccatcagcatattcagctaat 707
||||| ||||| ||||| ||||| || |||| |||||||| |||||||| ||||| ||
Sbjct: 147 ccatctaacagcttggtcctgaaagtcttatccgcctctccgtcagcatactcagcaaac 206
Query: 708 ccaaagactaagttagcgtctcctccatcgctcactgggtcagctatatcattggtttcg 767
|||||| ||||||| || || |||||||| ||||| ||||| ||||||||| |||||||
Sbjct: 207 ccaaagtctaagttggcttcccctccatctctcacagggtcggctatatcactggtttct 266
Query: 768 gttatgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagc 827
||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 267 gttatgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagc 326
Query: 828 aaccggttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatgagagagct 887
||| ||||||| || ||||||||||| ||||| | |||||| | ||| |||||| ||||
Sbjct: 327 aacaggttcctaaaatctggtgttcagaaggccggtagcaagataaggcatgagaaagct 386
Query: 888 ggaaacgagcaatttgtggcagagataagcaaatgggttttccatgagaggggacatcta 947
||||| || ||||||||| |||| | |||||||||||| |||||||||||||| ||||||
Sbjct: 387 ggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgagaggggccatcta 446
Query: 948 aaggctgttaatgttaggcatcacaaggttggggagaccaatgaaccaggcatgtaccgc 1007
||||| || ||||| | |||| |||||||||||||||| ||||| || ||||||||||||
Sbjct: 447 aaggcagtgaatgtcaagcataacaaggttggggagacaaatgagcctggcatgtaccgc 506
Query: 1008 attaatgatgacctggaatactctgttgagatctatgaatggtccggaacaagctggaag 1067
|| ||||||||| |||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 507 atcaatgatgacttggaatactctgttgagatctacgaatggtctgggacaagctggaag 566
Query: 1068 ccgtatgttgctgatga 1084
|||||||||||||||||
Sbjct: 567 ccgtatgttgctgatga 583
>gb|CF304154.1|CF304154 ABF1--04-D12.g1 ABF3-overexpressing transgenic rice lambda phage
cDNA library (ABF1) Oryza sativa (japonica
cultivar-group) cDNA clone ABF1--04-D12, mRNA sequence
Length = 577
Score = 470 bits (237), Expect = e-129
Identities = 474/553 (85%)
Strand = Plus / Plus
Query: 381 gaatttattgatgctgggcatgacatgatcctggcggcagattcctctgcctctgatctc 440
||||| || |||||||| ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 25 gaattcatcgatgctggtcatgatatgatcctggcagcagactcttcggcctctgatctt 84
Query: 441 attcgtggcattgcaacagagtgtggggttgattttgatgaggatccagaggcaatggtt 500
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atccgaggcattgcaacagagtgtggggttgattttgatgaggatccagaggcaatggtt 144
Query: 501 attgaccatatgaactatgccgtcacagatgttgaaggtgatcacaccttgattgctggt 560
||||| || || || ||||| | ||| |||| |||||||||||| || ||||||||||||
Sbjct: 145 attgatcacattaattatgctgccactgatgctgaaggtgatcatactttgattgctggt 204
Query: 561 gacgatcttatccattcggatgtgatactagggtctgaaaagattgaggctcctgtattg 620
|| || || ||||| || ||||||||||| ||||| | || |||||||| ||||||||
Sbjct: 205 gatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggcccctgtatta 264
Query: 621 tttcgaggaattggacacatggctaatccatcaaacagtttggttctgaaggttctatca 680
||||| ||||||||||| || ||||||||| ||||| ||||| ||||| || ||||
Sbjct: 265 tttcggggaattggacatgcggttaatccatctaacagcttggtcctgaaagtcttatcc 324
Query: 681 gcctctccatcagcatattcagctaatccaaagactaagttagcgtctcctccatcgctc 740
|||||||| |||||||| ||||| || |||||| ||||||| || || |||||||| |||
Sbjct: 325 gcctctccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccatctctc 384
Query: 741 actgggtcagctatatcattggtttcggttatgcaggcaagaaataatgctcgggtgctg 800
|| ||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 385 acagggtcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgggtcttg 444
Query: 801 ttatctggatcactcgatctgtttagcaaccggttcctgaagtctggtgttcaaaaggct 860
||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||||
Sbjct: 445 atatctggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcagaaggcc 504
Query: 861 gatagcaaaacaagatatgagagagctggaaacgagcaatttgtggcagagataagcaaa 920
| |||||| | ||| |||||| ||||||||| || ||||||||| |||| | |||||||
Sbjct: 505 ggtagcaagataaggcatgagaaagctggaaatgaacaatttgtgacagaaacaagcaaa 564
Query: 921 tgggttttccatg 933
||||| |||||||
Sbjct: 565 tgggtcttccatg 577
>gb|CF324849.1|CF324849 JMT1--01-K06.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--01-K06, mRNA sequence
Length = 576
Score = 446 bits (225), Expect = e-122
Identities = 451/525 (85%), Gaps = 1/525 (0%)
Strand = Plus / Plus
Query: 528 gatgttgaaggtgatcacaccttgattgctggtgacgatcttatccattcggatgtgata 587
|||| |||||||||||| || |||||||||||||| || || ||||| || |||||||||
Sbjct: 33 gatgctgaaggtgatcatactttgattgctggtgatgacctcatccagtcagatgtgata 92
Query: 588 ctagggtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggctaat 647
|| ||||| | || |||||||| |||||||| ||||| ||||||||||| || ||||
Sbjct: 93 ctggggtcaaagaaaattgaggcccctgtattatttcggggaattggacatgcggttaat 152
Query: 648 ccatcaaacagtttggttctgaaggttctatcagcctctccatcagcatattcagctaat 707
||||| ||||| ||||| ||||| || |||| |||||||| |||||||| ||||| ||
Sbjct: 153 ccatctaacagcttggtcctgaaagtcttatccgcctctccgtcagcatactcagcaaac 212
Query: 708 ccaaagactaagttagcgtctcctccatcgctcactgggtcagctatatcattggtttcg 767
|||||| ||||||| || || |||||||| ||||| ||||| ||||||||| |||||||
Sbjct: 213 ccaaagtctaagttggcttcccctccatctctcacagggtcggctatatcactggtttct 272
Query: 768 gttatgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagc 827
||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct: 273 gttatgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagc 332
Query: 828 aaccggttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatgagagagct 887
||| ||||||| || ||||||||||| ||||| | |||||| | ||| |||||| ||||
Sbjct: 333 aacaggttcctaaaatctggtgttcagaaggccggtagcaagataaggcatgagaaagct 392
Query: 888 ggaaacgagcaatttgtggcagagataagcaaatgggttttccatgagaggggacatcta 947
||||| || ||||||||| |||| | |||||||||||| |||||||||||||| ||||||
Sbjct: 393 ggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgagaggggccatcta 452
Query: 948 aaggctgttaatgttaggcatcacaaggttgg-ggagaccaatgaaccaggcatgtaccg 1006
||||| || ||||| | |||| |||||||||| |||||| ||||| || |||||||||||
Sbjct: 453 aaggcagtgaatgtcaagcataacaaggttggnggagacaaatgagcctggcatgtaccg 512
Query: 1007 cattaatgatgacctggaatactctgttgagatctatgaatggtc 1051
||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 513 catcaatgatgacttggaatactctgttgagatctacgaatggtc 557
>gb|CF323824.1|CF323824 HDN--04-N22.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-N22, mRNA sequence
Length = 529
Score = 444 bits (224), Expect = e-122
Identities = 446/520 (85%)
Strand = Plus / Plus
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 9 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 68
Query: 466 gggttgattttgatgaggatccagaggcaatggttattgaccatatgaactatgccgtca 525
|||||||||||||||||||||||||||||||||||||||| || || || ||||| | ||
Sbjct: 69 gggttgattttgatgaggatccagaggcaatggttattgatcacattaattatgctgcca 128
Query: 526 cagatgttgaaggtgatcacaccttgattgctggtgacgatcttatccattcggatgtga 585
| |||| |||||||||||| || |||||||||||||| || || ||||| || |||||||
Sbjct: 129 ctgatgctgaaggtgatcatactttgattgctggtgatgacctcatccagtcagatgtga 188
Query: 586 tactagggtctgaaaagattgaggctcctgtattgtttcgaggaattggacacatggcta 645
|||| ||||| | || |||||||| |||||||| ||||| ||||||||||| || ||
Sbjct: 189 tactggggtcaaagaaaattgaggcccctgtattatttcggggaattggacatgcggtta 248
Query: 646 atccatcaaacagtttggttctgaaggttctatcagcctctccatcagcatattcagcta 705
||||||| ||||| ||||| ||||| || |||| |||||||| |||||||| ||||| |
Sbjct: 249 atccatctaacagcttggtcctgaaagtcttatccgcctctccgtcagcatactcagcaa 308
Query: 706 atccaaagactaagttagcgtctcctccatcgctcactgggtcagctatatcattggttt 765
| |||||| ||||||| || || |||||||| ||||| ||||| ||||||||| ||||||
Sbjct: 309 acccaaagtctaagttggcttcccctccatctctcacagggtcggctatatcactggttt 368
Query: 766 cggttatgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgttta 825
| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 369 ctgttatgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgttta 428
Query: 826 gcaaccggttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatgagagag 885
||||| ||||||| || ||||||||||| ||||| | |||||| | ||| |||||| ||
Sbjct: 429 gcaacaggttcctaaaatctggtgttcagaaggccggtagcaagataaggcatgagaaag 488
Query: 886 ctggaaacgagcaatttgtggcagagataagcaaatgggt 925
||||||| || ||||||||| |||| | ||||||||||||
Sbjct: 489 ctggaaatgaacaatttgtgacagaaacaagcaaatgggt 528
>gb|CA999345.1|CA999345 S234G_E07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 456
Score = 428 bits (216), Expect = e-117
Identities = 396/456 (86%)
Strand = Plus / Plus
Query: 627 ggaattggacacatggctaatccatcaaacagtttggttctgaaggttctatcagcctct 686
||||||||||| || ||||||||| ||||| ||||| ||||| || |||| ||||||
Sbjct: 1 ggaattggacatgcggttaatccatctaacagcttggtcctgaaagtcttatccgcctct 60
Query: 687 ccatcagcatattcagctaatccaaagactaagttagcgtctcctccatcgctcactggg 746
|| |||||||| ||||| || |||||| ||||||| || || |||||||| ||||| |||
Sbjct: 61 ccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccatctctcacaggg 120
Query: 747 tcagctatatcattggtttcggttatgcaggcaagaaataatgctcgggtgctgttatct 806
|| ||||||||| ||||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct: 121 tcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgggtcttgatatct 180
Query: 807 ggatcactcgatctgtttagcaaccggttcctgaagtctggtgttcaaaaggctgatagc 866
|||||||||||||||||||||||| ||||||| || ||||||||||| ||||| | ||||
Sbjct: 181 ggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcagaaggccggtagc 240
Query: 867 aaaacaagatatgagagagctggaaacgagcaatttgtggcagagataagcaaatgggtt 926
|| | ||| |||||| ||||||||| || ||||||||| |||| | ||||||||||||
Sbjct: 241 aagataaggcatgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtc 300
Query: 927 ttccatgagaggggacatctaaaggctgttaatgttaggcatcacaaggttggggagacc 986
|||||||||||||| ||||||||||| || ||||| | |||| ||||||||||||||||
Sbjct: 301 ttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaaggttggggagaca 360
Query: 987 aatgaaccaggcatgtaccgcattaatgatgacctggaatactctgttgagatctatgaa 1046
||||| || |||||||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 361 aatgagcctggcatgtaccgcatcaatgatgacttggaatactctgttgagatctacgaa 420
Query: 1047 tggtccggaacaagctggaagccgtatgttgctgat 1082
||||| || || ||||||||||||||||||||||||
Sbjct: 421 tggtctgggaccagctggaagccgtatgttgctgat 456
>gb|AU096735.1|AU096735 AU096735 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S14870, mRNA sequence
Length = 678
Score = 406 bits (205), Expect = e-110
Identities = 398/460 (86%), Gaps = 3/460 (0%)
Strand = Plus / Plus
Query: 927 ttccatgagaggggacatctaaa-ggctgttaatgttaggcatcacaaggttggggagac 985
||||||||||||| |||||||| ||| || ||||| | |||| |||||||||||||||
Sbjct: 2 ttccatgagagggnccatctaaaaggcagtgaatgtcaagcataccaaggttggggagac 61
Query: 986 caatgaaccaggc-atgtaccgcattaatgatgacctggaatactctgttgagatctatg 1044
||||| || ||| ||||||||||| ||||||||| |||||||||||||||||||||| |
Sbjct: 62 aaatgagcctggccatgtaccgcatcaatgatgacttggaatactctgttgagatctacg 121
Query: 1045 aatggtccggaacaagctggaagccgtatgttgctgatgatgtgcagcttcaatttttca 1104
||||||| || || ||||||||||||||||||||||||||||| || ||| |||| ||
Sbjct: 122 aatggtctgggaccagctggaagccgtatgttgctgatgatgttcaagttcngttttaca 181
Query: 1105 tgatgagcccttacgttctgaaaactatgtcgactgacaacaagggtttgtattcaacaa 1164
||||||||||||| |||||||| || ||||||||||||| |||||| | | |||||||
Sbjct: 182 tgatgagcccttatgttctgaagacactgtcgactgacaagaagggtgtattttcaacan 241
Query: 1165 ccttcaaagttccagatgtttatggagttttccagttcaaagttgagtaccaaagactgg 1224
|||||||||||||||||||||||||||||||||||||| ||||||||||||| || || |
Sbjct: 242 ccttcaaagttccagatgtttatggagttttccagttcnaagttgagtaccagaggcttg 301
Query: 1225 gatatactggtctgtcttttacaaagcagattccagtacgtccttacagacataatgagt 1284
||||||||||||| ||| || | |||||||||||||| || |||| ||| ||||||||||
Sbjct: 302 gatatactggtctctctctttctaagcagattccagtgcg-ccttncaggcataatgagt 360
Query: 1285 atgagagattcataacatcagcgtacccatactacaccgcctcattttcaacaatgggtg 1344
|||| ||||||||||| || || || || ||||| | || || |||||||||||||| |
Sbjct: 361 atgaaagattcataacttcggcatatccgtactatgctgcgtcgttttcaacaatgggag 420
Query: 1345 ctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
| |||||| | ||||| |||||||||||||||||||||||
Sbjct: 421 ccttcttcatcttctcatttgtgtacctgtaccacaaata 460
>gb|CA999716.1|CA999716 S234I_D09 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 409
Score = 365 bits (184), Expect = 5e-098
Identities = 352/408 (86%)
Strand = Plus / Plus
Query: 627 ggaattggacacatggctaatccatcaaacagtttggttctgaaggttctatcagcctct 686
||||||||||| || ||||||||| ||||| ||||| ||||| || |||| ||||||
Sbjct: 2 ggaattggacatgcggttaatccatctaacagcttggtcctgaaagtcttatccgcctct 61
Query: 687 ccatcagcatattcagctaatccaaagactaagttagcgtctcctccatcgctcactggg 746
|| |||||||| ||||| || |||||| ||||||| || || |||||||| ||||| |||
Sbjct: 62 ccgtcagcatactcagcaaacccaaagtctaagttggcttcccctccatctctcacaggg 121
Query: 747 tcagctatatcattggtttcggttatgcaggcaagaaataatgctcgggtgctgttatct 806
|| ||||||||| ||||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct: 122 tcggctatatcactggtttctgttatgcaggcaagaaacaatgctcgggtcttgatatct 181
Query: 807 ggatcactcgatctgtttagcaaccggttcctgaagtctggtgttcaaaaggctgatagc 866
|||||||||||||||||||||||| ||||||| || ||||||||||| ||||| | ||||
Sbjct: 182 ggatcactcgatctgtttagcaacaggttcctaaaatctggtgttcagaaggccggtagc 241
Query: 867 aaaacaagatatgagagagctggaaacgagcaatttgtggcagagataagcaaatgggtt 926
|| | ||| |||||| ||||||||| || ||||||||| |||| | ||||||||||||
Sbjct: 242 aagataaggcatgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtc 301
Query: 927 ttccatgagaggggacatctaaaggctgttaatgttaggcatcacaaggttggggagacc 986
|||||||||||||| ||||||||||| || ||||| | |||| ||||||||||||||||
Sbjct: 302 ttccatgagaggggccatctaaaggcagtgaatgtcaagcataacaaggttggggagaca 361
Query: 987 aatgaaccaggcatgtaccgcattaatgatgacctggaatactctgtt 1034
||||| || |||||||||||||| ||||||||| ||||||||||||||
Sbjct: 362 aatgagcctggcatgtaccgcatcaatgatgacttggaatactctgtt 409
>gb|AU063380.2|AU063380 AU063380 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61218_1A, mRNA sequence
Length = 488
Score = 313 bits (158), Expect = 2e-082
Identities = 345/409 (84%)
Strand = Plus / Plus
Query: 313 acggcctcgtgctcttcgccccctccacaccacgttttggtggatcagtggaccagaacg 372
|||||||| | ||||||||||||||||| || |||||||| |||||||||||||| ||
Sbjct: 1 acggcctcntcctcttcgccccctccacnccgcgttttggaggatcagtggaccaaaatt 60
Query: 373 cagtcctcgaatttattgatgctgggcatgacatgatcctggcggcagattcctctgcct 432
|| | || ||||| || |||||||| ||||| ||||||||||| ||||| || || ||||
Sbjct: 61 caattctggaattcatcgatgctggtcatgatatgatcctggcagcagactcttcggcct 120
Query: 433 ctgatctcattcgtggcattgcaacagagtgtggggttgattttgatgaggatccagagg 492
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgatcttatccgaggcattgcaacagagtgtggggttgattttgatgaggatccagagg 180
Query: 493 caatggttattgaccatatgaactatgccgtcacagatgttgaaggtgatcacaccttga 552
||||||||||||| || || || ||||| | ||| |||| |||||||||||| || ||||
Sbjct: 181 caatggttattgatcacattaattatgctgccactgatgctgaaggtgatcatactttga 240
Query: 553 ttgctggtgacgatcttatccattcggatgtgatactagggtctgaaaagattgaggctc 612
|||||||||| || || ||||| || ||||||||||| ||||| | || |||||||| |
Sbjct: 241 ttgctggtgatgacctcatccagtcagatgtgatactggggtcaaagaaaattgaggccc 300
Query: 613 ctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggttctgaagg 672
||||||| ||||| |||||||| || || ||||||||| |||| ||||| ||||| |
Sbjct: 301 ctgtattatttcggggaattggncatgcggttaatccatctnacagcttggtcctgaaag 360
Query: 673 ttctatcagcctctccatcagcatattcagctaatccaaagactaagtt 721
| |||| ||||| || |||||||| ||||| || |||||| |||||||
Sbjct: 361 tcttatccgcctcnccgtcagcatactcagcaaacccaaagtctaagtt 409
>gb|D41490.1|D41490 RICS4019A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 350
Score = 258 bits (130), Expect = 9e-066
Identities = 285/335 (85%), Gaps = 2/335 (0%)
Strand = Plus / Plus
Query: 644 taatccatcaaacagtttggttctgaaggttctatcagcctctccatcagcatattcagc 703
||||||||| ||||| ||||| |||| || |||| |||||||| |||||||| |||||
Sbjct: 16 taatccatctaacagcttggtnntgaaagtcttatccgcctctccgtcagcatactcagc 75
Query: 704 taatccaaagactaagttagcgtctcctccatcgctcactgggtcagctatatcattggt 763
|| |||||| ||||||| || || |||||||| ||||| ||||| ||||||||| ||||
Sbjct: 76 aaacccaaagtctaagttggcttcccctccatctctcacagggtcggctatatcactggt 135
Query: 764 ttcggttatgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtt 823
||| ||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||
Sbjct: 136 ttctgttatgcaggcaagaaacaatgctcgggtcttgatatctggntcactcgatctgtt 195
Query: 824 tagcaaccggttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatgagag 883
||||||| ||||||| || ||||||||||| ||||| | |||||| | ||| ||||||
Sbjct: 196 tagcaacaggttcctaaaatctggtgttcagaaggccggtagcaagataaggcatgagaa 255
Query: 884 agctggaaacgagcaa-tttgtggcagagataagcaaatgggttttccatgagaggggac 942
||||||||| || ||| |||||| |||| | |||||||||||| |||||||||||||| |
Sbjct: 256 agctggaaatgaacaattttgtgacaga-acaagcaaatgggtcttccatgagaggggcc 314
Query: 943 atctaaaggctgttaatgttaggcatcacaaggtt 977
|||| ||||| |||||||| | |||| ||||||||
Sbjct: 315 atcttaaggcagttaatgtcaagcataacaaggtt 349
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1136_A05
Length = 120823
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 60113 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 60172
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 60173 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 60232
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 60233 agtacctctacgacggcctcgtcctcttcgccccctccac 60272
Score = 143 bits (72), Expect = 4e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 1022 ggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctga 1081
||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 63355 ggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctga 63414
Query: 1082 tgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
|||||| || |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 63415 tgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 63474
Query: 1142 caacaagg 1149
||| ||||
Sbjct: 63475 caagaagg 63482
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 60838 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 60897
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 60898 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 60957
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 60958 gggttgattttgatgagg 60975
Score = 129 bits (65), Expect = 6e-027
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1157 ttcaacaaccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 1216
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63573 ttcaacatccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 63632
Query: 1217 aagactgggatatactggtct 1237
|| || ||||||||||||||
Sbjct: 63633 gaggcttggatatactggtct 63653
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 61063 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 61122
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 61123 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 61177
Score = 85.7 bits (43), Expect = 8e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 63030 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 63089
Query: 937 ggggacatctaaagg 951
|||| ||||||||||
Sbjct: 63090 ggggccatctaaagg 63104
Score = 85.7 bits (43), Expect = 8e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 772 tgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaac 830
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 62338 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaac 62396
Score = 69.9 bits (35), Expect = 5e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagattcataac 1300
|||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 63777 gcagattccagtgcgcccttacaggcataatgagtatgaaagattcataac 63827
Score = 69.9 bits (35), Expect = 5e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 965 gcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgac 1019
|||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 63227 gcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgac 63281
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1338 atgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 64084 atgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 64130
Score = 44.1 bits (22), Expect = 0.26
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 607 aggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggt 664
|||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |||||
Sbjct: 61614 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 61671
>gb|AACV01015404.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015404,
whole genome shotgun sequence
Length = 15721
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Minus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 299 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 240
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 239 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 180
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 179 agtacctctacgacggcctcgtcctcttcgccccctccac 140
>gb|AACV01015405.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015405,
whole genome shotgun sequence
Length = 10828
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 331 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 390
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 391 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 450
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 451 agtacctctacgacggcctcgtcctcttcgccccctccac 490
Score = 143 bits (72), Expect = 4e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 1022 ggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctga 1081
||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 3573 ggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctga 3632
Query: 1082 tgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
|||||| || |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 3633 tgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 3692
Query: 1142 caacaagg 1149
||| ||||
Sbjct: 3693 caagaagg 3700
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 1056 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 1115
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 1116 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 1175
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 1176 gggttgattttgatgagg 1193
Score = 129 bits (65), Expect = 6e-027
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1157 ttcaacaaccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 1216
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3791 ttcaacatccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 3850
Query: 1217 aagactgggatatactggtct 1237
|| || ||||||||||||||
Sbjct: 3851 gaggcttggatatactggtct 3871
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 1281 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 1340
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 1341 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 1395
Score = 85.7 bits (43), Expect = 8e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 3248 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 3307
Query: 937 ggggacatctaaagg 951
|||| ||||||||||
Sbjct: 3308 ggggccatctaaagg 3322
Score = 85.7 bits (43), Expect = 8e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 772 tgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaac 830
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 2556 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaac 2614
Score = 69.9 bits (35), Expect = 5e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagattcataac 1300
|||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 3995 gcagattccagtgcgcccttacaggcataatgagtatgaaagattcataac 4045
Score = 69.9 bits (35), Expect = 5e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 965 gcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgac 1019
|||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 3445 gcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgac 3499
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1338 atgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 4302 atgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 4348
Score = 44.1 bits (22), Expect = 0.26
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 607 aggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggt 664
|||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |||||
Sbjct: 1832 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 1889
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 5873737 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 5873796
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 5873797 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 5873856
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 5873857 agtacctctacgacggcctcgtcctcttcgccccctccac 5873896
Score = 143 bits (72), Expect = 4e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 1022 ggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctga 1081
||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 5876979 ggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctga 5877038
Query: 1082 tgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
|||||| || |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 5877039 tgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 5877098
Query: 1142 caacaagg 1149
||| ||||
Sbjct: 5877099 caagaagg 5877106
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 5874462 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 5874521
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 5874522 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 5874581
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 5874582 gggttgattttgatgagg 5874599
Score = 129 bits (65), Expect = 6e-027
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1157 ttcaacaaccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 1216
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5877197 ttcaacatccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 5877256
Query: 1217 aagactgggatatactggtct 1237
|| || ||||||||||||||
Sbjct: 5877257 gaggcttggatatactggtct 5877277
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 5874687 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 5874746
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 5874747 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 5874801
Score = 85.7 bits (43), Expect = 8e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 5876654 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 5876713
Query: 937 ggggacatctaaagg 951
|||| ||||||||||
Sbjct: 5876714 ggggccatctaaagg 5876728
Score = 85.7 bits (43), Expect = 8e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 772 tgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaac 830
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 5875962 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaac 5876020
Score = 69.9 bits (35), Expect = 5e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagattcataac 1300
|||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 5877401 gcagattccagtgcgcccttacaggcataatgagtatgaaagattcataac 5877451
Score = 69.9 bits (35), Expect = 5e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 965 gcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgac 1019
|||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 5876851 gcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgac 5876905
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1338 atgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 5877708 atgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 5877754
Score = 44.1 bits (22), Expect = 0.26
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 607 aggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggt 664
|||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |||||
Sbjct: 5875238 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 5875295
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 3011958 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 3012017
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 3012018 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 3012077
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 3012078 agtacctctacgacggcctcgtcctcttcgccccctccac 3012117
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 3011279 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 3011338
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 3011339 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 3011398
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 3011399 agtacctctacgacggcctcgtcctcttcgccccctccac 3011438
Score = 143 bits (72), Expect = 4e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 1022 ggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctga 1081
||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 3015200 ggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctga 3015259
Query: 1082 tgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
|||||| || |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 3015260 tgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 3015319
Query: 1142 caacaagg 1149
||| ||||
Sbjct: 3015320 caagaagg 3015327
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 3012683 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 3012742
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 3012743 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 3012802
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 3012803 gggttgattttgatgagg 3012820
Score = 129 bits (65), Expect = 6e-027
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1157 ttcaacaaccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 1216
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3015418 ttcaacatccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 3015477
Query: 1217 aagactgggatatactggtct 1237
|| || ||||||||||||||
Sbjct: 3015478 gaggcttggatatactggtct 3015498
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 3012908 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 3012967
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 3012968 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 3013022
Score = 85.7 bits (43), Expect = 8e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 3014875 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 3014934
Query: 937 ggggacatctaaagg 951
|||| ||||||||||
Sbjct: 3014935 ggggccatctaaagg 3014949
Score = 85.7 bits (43), Expect = 8e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 772 tgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaac 830
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 3014183 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaac 3014241
Score = 69.9 bits (35), Expect = 5e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagattcataac 1300
|||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 3015622 gcagattccagtgcgcccttacaggcataatgagtatgaaagattcataac 3015672
Score = 69.9 bits (35), Expect = 5e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 965 gcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgac 1019
|||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 3015072 gcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgac 3015126
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1338 atgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 3015929 atgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 3015975
Score = 44.1 bits (22), Expect = 0.26
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 607 aggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggt 664
|||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |||||
Sbjct: 3013459 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 3013516
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 5828707 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 5828766
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 5828767 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 5828826
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 5828827 agtacctctacgacggcctcgtcctcttcgccccctccac 5828866
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 5828028 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 5828087
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 5828088 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 5828147
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 5828148 agtacctctacgacggcctcgtcctcttcgccccctccac 5828187
Score = 143 bits (72), Expect = 4e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 1022 ggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctga 1081
||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 5831949 ggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctga 5832008
Query: 1082 tgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
|||||| || |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 5832009 tgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 5832068
Query: 1142 caacaagg 1149
||| ||||
Sbjct: 5832069 caagaagg 5832076
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 5829432 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 5829491
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 5829492 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 5829551
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 5829552 gggttgattttgatgagg 5829569
Score = 129 bits (65), Expect = 6e-027
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1157 ttcaacaaccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 1216
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5832167 ttcaacatccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 5832226
Query: 1217 aagactgggatatactggtct 1237
|| || ||||||||||||||
Sbjct: 5832227 gaggcttggatatactggtct 5832247
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 5829657 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 5829716
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 5829717 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 5829771
Score = 85.7 bits (43), Expect = 8e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 5831624 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 5831683
Query: 937 ggggacatctaaagg 951
|||| ||||||||||
Sbjct: 5831684 ggggccatctaaagg 5831698
Score = 85.7 bits (43), Expect = 8e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 772 tgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaac 830
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 5830932 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaac 5830990
Score = 69.9 bits (35), Expect = 5e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagattcataac 1300
|||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 5832371 gcagattccagtgcgcccttacaggcataatgagtatgaaagattcataac 5832421
Score = 69.9 bits (35), Expect = 5e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 965 gcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgac 1019
|||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 5831821 gcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgac 5831875
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1338 atgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 5832678 atgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 5832724
Score = 44.1 bits (22), Expect = 0.26
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 607 aggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggt 664
|||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |||||
Sbjct: 5830208 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 5830265
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 246 bits (124), Expect = 4e-062
Identities = 151/160 (94%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 5917665 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 5917724
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 5917725 ggttcgatctcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggcc 5917784
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 5917785 agtacctctacgacggcctcgtcctcttcgccccctccac 5917824
Score = 143 bits (72), Expect = 4e-031
Identities = 114/128 (89%)
Strand = Plus / Plus
Query: 1022 ggaatactctgttgagatctatgaatggtccggaacaagctggaagccgtatgttgctga 1081
||||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 5920907 ggaatactctgttgagatctacgaatggtctgggaccagctggaagccgtatgttgctga 5920966
Query: 1082 tgatgtgcagcttcaatttttcatgatgagcccttacgttctgaaaactatgtcgactga 1141
|||||| || |||| |||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 5920967 tgatgttcaagttcagttttacatgatgagcccttatgttctgaagacactgtcgactga 5921026
Query: 1142 caacaagg 1149
||| ||||
Sbjct: 5921027 caagaagg 5921034
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Plus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 5918390 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 5918449
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 5918450 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 5918509
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 5918510 gggttgattttgatgagg 5918527
Score = 129 bits (65), Expect = 6e-027
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1157 ttcaacaaccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 1216
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5921125 ttcaacatccttcaaagttccagatgtttatggagttttccagttcaaagttgagtacca 5921184
Query: 1217 aagactgggatatactggtct 1237
|| || ||||||||||||||
Sbjct: 5921185 gaggcttggatatactggtct 5921205
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 5918615 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 5918674
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 5918675 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 5918729
Score = 85.7 bits (43), Expect = 8e-014
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 877 atgagagagctggaaacgagcaatttgtggcagagataagcaaatgggttttccatgaga 936
|||||| ||||||||| || ||||||||| |||| | |||||||||||| ||||||||||
Sbjct: 5920582 atgagaaagctggaaatgaacaatttgtgacagaaacaagcaaatgggtcttccatgaga 5920641
Query: 937 ggggacatctaaagg 951
|||| ||||||||||
Sbjct: 5920642 ggggccatctaaagg 5920656
Score = 85.7 bits (43), Expect = 8e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 772 tgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtttagcaac 830
||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 5919890 tgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtttagcaac 5919948
Score = 69.9 bits (35), Expect = 5e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1250 gcagattccagtacgtccttacagacataatgagtatgagagattcataac 1300
|||||||||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 5921329 gcagattccagtgcgcccttacaggcataatgagtatgaaagattcataac 5921379
Score = 69.9 bits (35), Expect = 5e-009
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 965 gcatcacaaggttggggagaccaatgaaccaggcatgtaccgcattaatgatgac 1019
|||| |||||||||||||||| ||||| || |||||||||||||| |||||||||
Sbjct: 5920779 gcataacaaggttggggagacaaatgagcctggcatgtaccgcatcaatgatgac 5920833
Score = 54.0 bits (27), Expect = 3e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1338 atgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 5921636 atgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 5921682
Score = 44.1 bits (22), Expect = 0.26
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 607 aggctcctgtattgtttcgaggaattggacacatggctaatccatcaaacagtttggt 664
|||| |||||||| ||||| ||||||||||| || ||||||||| ||||| |||||
Sbjct: 5919166 aggcccctgtattatttcggggaattggacatgcggttaatccatctaacagcttggt 5919223
>gb|D40902.1|D40902 RICS3087A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 306
Score = 238 bits (120), Expect = 9e-060
Identities = 248/291 (85%)
Strand = Plus / Plus
Query: 644 taatccatcaaacagtttggttctgaaggttctatcagcctctccatcagcatattcagc 703
||||||||| ||||| ||||| ||||| || |||| |||||||| |||||||| |||||
Sbjct: 16 taatccatctaacagcttggtnctgaaagtcttatccgcctctccgtcagcatactcagc 75
Query: 704 taatccaaagactaagttagcgtctcctccatcgctcactgggtcagctatatcattggt 763
|| |||||| ||||||| || || |||||||| ||||| ||||| ||||||||| ||||
Sbjct: 76 aaacccaaagtctaagttggcttcccctccatctctcacagggtcggctatatcactggt 135
Query: 764 ttcggttatgcaggcaagaaataatgctcgggtgctgttatctggatcactcgatctgtt 823
||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 136 ttctgttatgcaggcaagaaacaatgctcgggtcttgatatctggatcactcgatctgtt 195
Query: 824 tagcaaccggttcctgaagtctggtgttcaaaaggctgatagcaaaacaagatatgagag 883
||||||| ||||||| || ||||||||||| ||||| | |||||| | ||| ||||||
Sbjct: 196 tagcaacaggttcctaaaatctggtgttcagaaggccggtagcaagataaggcatgagaa 255
Query: 884 agctggaaacgagcaatttgtggcagagataagcaaatgggttttccatga 934
||||||||| || ||||||||| || | |||||||||||| ||||||||
Sbjct: 256 agctggaaatgaacaatttgtgacataaccaagcaaatgggtcttccatga 306
>gb|AZ134503.1|AZ134503 OSJNBb0112M04f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0112M04f, DNA
sequence
Length = 371
Score = 228 bits (115), Expect = 8e-057
Identities = 142/151 (94%)
Strand = Plus / Minus
Query: 190 tggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcgggttcgatc 249
|||| |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||
Sbjct: 371 tggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgagggttcgatc 312
Query: 250 tcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggccagtacctct 309
|||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 311 tcgacttccgcctcgccgacgaccccaagctctcactccaccgctacggccagtacctct 252
Query: 310 acgacggcctcgtgctcttcgccccctccac 340
||||||||||||| |||||||||||||||||
Sbjct: 251 acgacggcctcgtcctcttcgccccctccac 221
>gb|AU096734.1|AU096734 AU096734 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14870, mRNA sequence
Length = 289
Score = 228 bits (115), Expect = 8e-057
Identities = 148/160 (92%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||| |
Sbjct: 128 tggacgacctggcggtgcggtcgtcgcactcggccttcttcgcgtcgctccaggggcgag 187
Query: 241 ggttcgatctcgacttccgcctcgctgacgatcccaagctctcgctccaccgctacggcc 300
||||||||||||||||||||||||| ||||| |||||||||| | ||||||||||||||
Sbjct: 188 ggttcgatctcgacttccgcctcgccgacgacnccaagctctcacnccaccgctacggcc 247
Query: 301 agtacctctacgacggcctcgtgctcttcgccccctccac 340
|||||||||||||||||||||| |||||||||||| ||||
Sbjct: 248 agtacctctacgacggcctcgtcctcttcgcccccnccac 287
>gb|AQ579392.1|AQ579392 nbxb0084G04r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0084G04r, DNA sequence
Length = 740
Score = 131 bits (66), Expect = 1e-027
Identities = 120/138 (86%)
Strand = Plus / Minus
Query: 346 gttttggtggatcagtggaccagaacgcagtcctcgaatttattgatgctgggcatgaca 405
||||||| |||||||||||||| || || | || ||||| || |||||||| ||||| |
Sbjct: 159 gttttggaggatcagtggaccaaaattcaattctggaattcatcgatgctggtcatgata 100
Query: 406 tgatcctggcggcagattcctctgcctctgatctcattcgtggcattgcaacagagtgtg 465
|||||||||| ||||| || || ||||||||||| || || |||||||||||||||||||
Sbjct: 99 tgatcctggcagcagactcttcggcctctgatcttatccgaggcattgcaacagagtgtg 40
Query: 466 gggttgattttgatgagg 483
||||||||||||||||||
Sbjct: 39 gggttgattttgatgagg 22
>gb|AQ287533.1|AQ287533 nbxb0030O06r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0030O06r, DNA sequence
Length = 684
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 90 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 149
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 150 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 204
>gb|AQ365660.2|AQ365660 nbxb0064A08f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0064A08f, DNA sequence
Length = 305
Score = 101 bits (51), Expect = 1e-018
Identities = 99/115 (86%)
Strand = Plus / Plus
Query: 481 aggatccagaggcaatggttattgaccatatgaactatgccgtcacagatgttgaaggtg 540
||||||||||||||||||||||||| || || || ||||| | ||| |||| ||||||||
Sbjct: 60 aggatccagaggcaatggttattgatcacattaattatgctgccactgatgctgaaggtg 119
Query: 541 atcacaccttgattgctggtgacgatcttatccattcggatgtgatactagggtc 595
|||| || |||||||||||||| || || ||||| || ||||||||||| |||||
Sbjct: 120 atcatactttgattgctggtgatgacctcatccagtcagatgtgatactggggtc 174
>gb|D39497.1|D39497 RICS0874A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 233
Score = 81.8 bits (41), Expect = 1e-012
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 181 tggacgacctggccgtgcggtcgtcgcactcggccttcttcggctcgctccaggcgcgcg 240
|||||||||||| ||| |||||||| ||||| |||| |||| ||| |||||| ||| |
Sbjct: 150 tggacgacctggnggtgnggtcgtcgnactcgnccttnttcgcgtcgatccaggggcgag 209
Query: 241 ggttcgatctcgacttccgcctcg 264
||||||||||||||||||| ||||
Sbjct: 210 ggttcgatctcgacttccgtctcg 233
>gb|AU077998.1|AU077998 AU077998 Oryza sativa Ariete seed Oryza sativa (japonica
cultivar-group) cDNA clone g131c8, mRNA sequence
Length = 435
Score = 71.9 bits (36), Expect = 1e-009
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 1329 ttttcaacaatgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
|||||||||||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 399 ttttcaacaatgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 344
>gb|AU161286.1|AU161286 AU161286 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61218, mRNA sequence
Length = 471
Score = 71.9 bits (36), Expect = 1e-009
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1329 ttttcaacaatgggtgctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
|||||||||||||| || |||||| | ||||| |||||||||||||||||||||||
Sbjct: 23 ttttcaacaatgggagccttcttcatcttctcatttgtgtacctgtaccacaaata 78
>gb|AU077999.1|AU077999 AU077999 Oryza sativa Ariete seed Oryza sativa (japonica
cultivar-group) cDNA clone g132c7, mRNA sequence
Length = 494
Score = 50.1 bits (25), Expect = 0.004
Identities = 50/57 (87%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 1329 ttttcaacaatgggtg-ctttcttcgtattctcgtttgtgtacctgtaccacaaata 1384
|||||||||||||| | | |||||| | ||||| |||| ||||||||||||||||||
Sbjct: 462 ttttcaacaatgggagtccttcttcatcttctcatttgagtacctgtaccacaaata 406
>dbj|AK122005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110O14, full
insert sequence
Length = 1158
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 347 tcctgctcctcctcgccgccgcctt 371
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 157453
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 119812 tcctgctcctcctcgccgccgcctt 119836
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0035B18, complete sequence
Length = 123425
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 18073 tcctgctcctcctcgccgccgcctt 18049
>ref|NT_107123.1| Oryza sativa (japonica cultivar-group)
Length = 646131
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 397560 tcctgctcctcctcgccgccgcctt 397536
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1309358 tcctgctcctcctcgccgccgcctt 1309334
>gb|AACV01022284.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022284, whole
genome shotgun sequence
Length = 83387
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 83144 tcctgctcctcctcgccgccgcctt 83168
>gb|AACV01023900.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023900, whole
genome shotgun sequence
Length = 102266
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 70838 tcctgctcctcctcgccgccgcctt 70862
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109 genomic
scaffold, whole genome shotgun sequence
Length = 5753019
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1234489 tcctgctcctcctcgccgccgcctt 1234465
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094 genomic
scaffold, whole genome shotgun sequence
Length = 4775249
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1092486 tcctgctcctcctcgccgccgcctt 1092462
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome shotgun
sequence
Length = 23730396
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1234489 tcctgctcctcctcgccgccgcctt 1234465
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1394778 tcctgctcctcctcgccgccgcctt 1394754
Score = 46.1 bits (23), Expect = 0.065
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcc 104
|||||||||||||||||||||||
Sbjct: 15258582 tcctgctcctcctcgccgccgcc 15258604
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1399278 tcctgctcctcctcgccgccgcctt 1399254
Score = 46.1 bits (23), Expect = 0.065
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcc 104
|||||||||||||||||||||||
Sbjct: 18392656 tcctgctcctcctcgccgccgcc 18392678
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1309357 tcctgctcctcctcgccgccgcctt 1309333
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1396999 tcctgctcctcctcgccgccgcctt 1396975
Score = 46.1 bits (23), Expect = 0.065
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcc 104
|||||||||||||||||||||||
Sbjct: 18552057 tcctgctcctcctcgccgccgcc 18552079
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 50.1 bits (25), Expect = 0.004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 82 tcctgctcctcctcgccgccgcctt 106
|||||||||||||||||||||||||
Sbjct: 1309357 tcctgctcctcctcgccgccgcctt 1309333
>gb|CB647699.1|CB647699 OSJNEb10L19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10L19 5', mRNA sequence
Length = 863
Score = 46.1 bits (23), Expect = 0.065
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tcctgctcctcctcgccgccgcc 104
|||||||||||||||||||||||
Sbjct: 103 tcctgctcctcctcgccgccgcc 125
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,576,337
Number of Sequences: 438736
Number of extensions: 2576337
Number of successful extensions: 23358
Number of sequences better than 0.5: 56
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22502
Number of HSP's gapped (non-prelim): 841
length of query: 1775
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1753
effective length of database: 2,790,767,724
effective search space: 4892215820172
effective search space used: 4892215820172
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)