BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161254.2.1
(1192 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW695082.1|AW695082 NF091D12ST1F1101 Developing stem Med... 84 3e-014
gb|BF646871.1|BF646871 NF068B09EC1F1076 Elicited cell cultu... 84 3e-014
gb|BF647863.1|BF647863 NF038B02EC1F1016 Elicited cell cultu... 84 3e-014
gb|AW693828.2|AW693828 NF069E04ST1F1034 Developing stem Med... 84 3e-014
gb|BG450081.1|BG450081 NF011E06DT1F1051 Drought Medicago tr... 84 3e-014
gb|BI308280.1|BI308280 EST529690 GPOD Medicago truncatula c... 84 3e-014
gb|BQ148260.1|BQ148260 NF065D12FL1F1102 Developing flower M... 84 3e-014
gb|AJ498016.1|AJ498016 AJ498016 MTPOSE Medicago truncatula ... 84 3e-014
gb|CB891685.1|CB891685 EST648654 KV3 Medicago truncatula cD... 84 3e-014
gb|CF068981.1|CF068981 EST669702 MTUS Medicago truncatula c... 84 3e-014
gb|CX523840.1|CX523840 s13dNF05F06AT059_440078 Aphid-Infect... 84 3e-014
gb|CX535243.1|CX535243 s13dNF37C05MJ038_388663 Methyl Jasmo... 84 3e-014
gb|AW689696.1|AW689696 NF023D01ST1F1000 Developing stem Med... 78 2e-012
gb|AW684688.1|AW684688 NF019G06NR1F1000 Nodulated root Medi... 68 2e-009
gb|AW685841.1|AW685841 NF035G04NR1F1000 Nodulated root Medi... 68 2e-009
gb|BE202969.1|BE202969 EST402981 KV1 Medicago truncatula cD... 68 2e-009
gb|BF641676.1|BF641676 NF065D04IN1F1041 Insect herbivory Me... 68 2e-009
gb|BF650381.1|BF650381 NF088A11EC1F1083 Elicited cell cultu... 68 2e-009
gb|BI308700.1|BI308700 EST530110 GPOD Medicago truncatula c... 68 2e-009
gb|BQ148137.1|BQ148137 NF062B04FL1F1041 Developing flower M... 68 2e-009
gb|CB893594.1|CB893594 EST646386 HOGA Medicago truncatula c... 68 2e-009
gb|CX534923.1|CX534923 s13dNF0MH08MJ076_336245 Methyl Jasmo... 68 2e-009
gb|AC141107.5| Medicago truncatula clone mth2-34a12, comple... 68 2e-009
gb|AC161401.2| Medicago truncatula chromosome 7 clone mte1-... 60 5e-007
gb|AW685281.1|AW685281 NF027B07NR1F1000 Nodulated root Medi... 58 2e-006
gb|BE202968.1|BE202968 EST402980 KV1 Medicago truncatula cD... 56 7e-006
gb|BI270386.1|BI270386 NF010G07FL1F1056 Developing flower M... 54 3e-005
gb|CB892038.1|CB892038 EST649007 KV3 Medicago truncatula cD... 54 3e-005
gb|CX535093.1|CX535093 s13dNF36H09MJ080_388365 Methyl Jasmo... 54 3e-005
gb|CX542040.1|CX542040 s13dNF89D01GS014_467388 Germinating ... 54 3e-005
gb|CG948580.1|CG948580 MBENM12TR mth2 Medicago truncatula g... 40 0.42
gb|CG954520.1|CG954520 MBENE72TR mth2 Medicago truncatula g... 40 0.42
gb|BI271948.1|BI271948 NF016G12FL1F1099 Developing flower M... 40 0.42
gb|AC146341.10| Medicago truncatula clone mth2-10g1, comple... 40 0.42
>gb|AW695082.1|AW695082 NF091D12ST1F1101 Developing stem Medicago truncatula cDNA clone
NF091D12ST 5', mRNA sequence
Length = 628
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 365 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 424
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 425 gtgagcaacagaggatttgaagctggaggc 454
>gb|BF646871.1|BF646871 NF068B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF068B09EC 5', mRNA sequence
Length = 652
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 309 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 368
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 369 gtgagcaacagaggatttgaagctggaggc 398
Score = 48.1 bits (24), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| || || |||||||||||
Sbjct: 545 tggtgttggcgtttataaccctggnttctggggcatgaa 583
>gb|BF647863.1|BF647863 NF038B02EC1F1016 Elicited cell culture Medicago truncatula cDNA
clone NF038B02EC 5', mRNA sequence
Length = 614
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 342 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 401
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 402 gtgagcaacagaggatttgaagctggaggc 431
Score = 42.1 bits (21), Expect = 0.11
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttgggg 704
||||||||| ||||||||||| ||||| |||||
Sbjct: 582 tggtgttggcgtttataaccctggtttctgggg 614
>gb|AW693828.2|AW693828 NF069E04ST1F1034 Developing stem Medicago truncatula cDNA clone
NF069E04ST 5', mRNA sequence
Length = 604
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 338 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 397
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 398 gtgagcaacagaggatttgaagctggaggc 427
>gb|BG450081.1|BG450081 NF011E06DT1F1051 Drought Medicago truncatula cDNA clone NF011E06DT
5', mRNA sequence
Length = 621
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 336 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 395
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 396 gtgagcaacagaggatttgaagctggaggc 425
>gb|BI308280.1|BI308280 EST529690 GPOD Medicago truncatula cDNA clone pGPOD-2L19 5' end,
mRNA sequence
Length = 808
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 338 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 397
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 398 gtgagcaacagaggatttgaagctggaggc 427
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 574 tggtgttggcgtttataaccctggtttctggggcatgaa 612
>gb|BQ148260.1|BQ148260 NF065D12FL1F1102 Developing flower Medicago truncatula cDNA clone
NF065D12FL 5', mRNA sequence
Length = 664
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 317 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 376
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 377 gtgagcaacagaggatttgaagctggaggc 406
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 553 tggtgttggcgtttataaccctggtttctggggcatgaa 591
>gb|AJ498016.1|AJ498016 AJ498016 MTPOSE Medicago truncatula cDNA clone mt--acc955200a10,
mRNA sequence
Length = 565
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 190 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 249
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 250 gtgagcaacagaggatttgaagctggaggc 279
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatg 708
||||||||| ||||||||||| ||||| |||||||||
Sbjct: 426 tggtgttggcgtttataaccctggtttctggggcatg 462
>gb|CB891685.1|CB891685 EST648654 KV3 Medicago truncatula cDNA clone KV3-51D17, mRNA
sequence
Length = 469
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 435 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 376
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 375 gtgagcaacagaggatttgaagctggaggc 346
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 199 tggtgttggcgtttataaccctggtttctggggcatgaa 161
>gb|CF068981.1|CF068981 EST669702 MTUS Medicago truncatula cDNA clone MTUS-14H2, mRNA
sequence
Length = 530
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 280 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 339
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 340 gtgagcaacagaggatttgaagctggaggc 369
>gb|CX523840.1|CX523840 s13dNF05F06AT059_440078 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 547
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 369 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 428
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 429 gtgagcaacagaggatttgaagctggaggc 458
>gb|CX535243.1|CX535243 s13dNF37C05MJ038_388663 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 437
Score = 83.8 bits (42), Expect = 3e-014
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 183 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 242
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||||||| || ||||||||||||
Sbjct: 243 gtgagcaacagaggatttgaagctggaggc 272
>gb|AW689696.1|AW689696 NF023D01ST1F1000 Developing stem Medicago truncatula cDNA clone
NF023D01ST 5', mRNA sequence
Length = 634
Score = 77.8 bits (39), Expect = 2e-012
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||||||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 316 tttggaatattttttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 375
Query: 499 gtcagtaacagaggtttcgaagctggaggc 528
|| || |||| ||| || ||||||||||||
Sbjct: 376 gtgagcaacanaggatttgaagctggaggc 405
Score = 48.1 bits (24), Expect = 0.002
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| || || |||||||||||
Sbjct: 553 tggtgttggcgtttataaccctggnttctggggcatgaa 591
>gb|AW684688.1|AW684688 NF019G06NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF019G06NR 5', mRNA sequence
Length = 433
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 149 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 208
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 209 ggctattatgagtt 222
>gb|AW685841.1|AW685841 NF035G04NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF035G04NR 5', mRNA sequence
Length = 658
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 149 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 208
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 209 ggctattatgagtt 222
>gb|BE202969.1|BE202969 EST402981 KV1 Medicago truncatula cDNA clone pKV1-3P1, mRNA sequence
Length = 622
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 12 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 71
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 72 ggctattatgagtt 85
>gb|BF641676.1|BF641676 NF065D04IN1F1041 Insect herbivory Medicago truncatula cDNA clone
NF065D04IN 5', mRNA sequence
Length = 662
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 76 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 135
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 136 ggctattatgagtt 149
>gb|BF650381.1|BF650381 NF088A11EC1F1083 Elicited cell culture Medicago truncatula cDNA clone
NF088A11EC 5', mRNA sequence
Length = 649
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 297 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 356
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 357 ggctattatgagtt 370
>gb|BI308700.1|BI308700 EST530110 GPOD Medicago truncatula cDNA clone pGPOD-7L22 5' end, mRNA
sequence
Length = 722
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 356 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 415
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 416 ggctattatgagtt 429
>gb|BQ148137.1|BQ148137 NF062B04FL1F1041 Developing flower Medicago truncatula cDNA clone
NF062B04FL 5', mRNA sequence
Length = 540
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 60 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 119
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 120 ggctattatgagtt 133
>gb|CB893594.1|CB893594 EST646386 HOGA Medicago truncatula cDNA clone HOGA-28M2, mRNA
sequence
Length = 858
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 309 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 368
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 369 ggctattatgagtt 382
>gb|CX534923.1|CX534923 s13dNF0MH08MJ076_336245 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 490
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 360 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 419
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 420 ggctattatgagtt 433
>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
Length = 142659
Score = 67.9 bits (34), Expect = 2e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1114 tgggaagagaggcctggacacttcggggatgtttggcattactggactgatgatgggctt 1173
||||| ||||| || || |||||||| ||||| ||| | ||||||||||||||||| |||
Sbjct: 56876 tgggaggagagaccagggcacttcggtgatgtatggaagtactggactgatgatggactt 56935
Query: 1174 ggatattatgagtt 1187
|| |||||||||||
Sbjct: 56936 ggctattatgagtt 56949
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatg 708
||||||||| || | ||||||||||||||||||||||
Sbjct: 88982 tggtgttggagtctctaacccaggtttttggggcatg 89018
Score = 50.1 bits (25), Expect = 4e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatg 708
||||||||| ||||||||||| ||||| |||||||||
Sbjct: 55081 tggtgttggcgtttataaccctggtttctggggcatg 55117
Score = 44.1 bits (22), Expect = 0.027
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 635 tgaggatggaggtcctctgtgatgagtgtccagctggtggtgttggtgtttataacccag 694
|||| ||||| || || |||||| | |||||| || ||||||||| ||| ||||||||
Sbjct: 72670 tgagaatggatgtgctatgtgataattgtccatttgatggtgttggaatttctaacccag 72729
Query: 695 gtttttggggcatg 708
||| ||||||||||
Sbjct: 72730 gttattggggcatg 72743
Score = 42.1 bits (21), Expect = 0.11
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtggcatatgggc 491
|||||||||||||||| ||| |||| || ||||||||
Sbjct: 88684 aggagatcaaccatgctggatctggaggaatatgggc 88720
Score = 40.1 bits (20), Expect = 0.42
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 1132 cacttcggggatgtttggcattactggactgatgatgggcttggatattatgagtt 1187
|||||||| |||| ||| | |||| |||||||||||| ||||| ||||||||||
Sbjct: 78269 cacttcggtaatgtatggaagtactagactgatgatggacttggccattatgagtt 78324
Score = 40.1 bits (20), Expect = 0.42
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 1106 ttggtccatgggaagagaggcctggacacttcggggatgtttggcattactggactgatg 1165
|||| |||||||||||||| |||||||||| ||| ||||| | || ||||| ||||
Sbjct: 74429 ttggaccatgggaagagagagctggacactttaatgatatttggaagtattggacggatg 74488
Query: 1166 atgggcttggatattatgag 1185
|||| ||||| | |||||||
Sbjct: 74489 atggacttggtttttatgag 74508
Score = 40.1 bits (20), Expect = 0.42
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 455 aggagatcaaccatgcaggagctggtgg 482
|||||||||| ||||| |||||||||||
Sbjct: 72108 aggagatcaatcatgctggagctggtgg 72135
>gb|AC161401.2| Medicago truncatula chromosome 7 clone mte1-59b16, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 95675
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||||| ||||||||| || | || ||||||||||| ||||||| ||| || ||||
Sbjct: 45562 ggttgttatgtagaaggagattatctgagaaatgcatttagatggaaagatacagttgga 45621
Query: 1111 ccatgggaagagaggcctggacactt 1136
|||||||||||||| ||||| |||||
Sbjct: 45622 ccatgggaagagagacctggccactt 45647
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 1051 ggttgttttgtagaaggtgactggctaagaaatgcattcagatggagagaatcaattggt 1110
||||||| ||||||||| || | || ||||||||||| ||||||| ||| || ||||
Sbjct: 6273 ggttgttatgtagaaggagattatctgagaaatgcatttagatggaaagatacagttgga 6332
Query: 1111 ccatgggaagagaggcctggacactt 1136
|||||||||||||| ||||| |||||
Sbjct: 6333 ccatgggaagagagacctggccactt 6358
>gb|AW685281.1|AW685281 NF027B07NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF027B07NR 5', mRNA sequence
Length = 651
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggc 491
||||| ||||||| |||||||||||||||||| ||| |||| || ||||||||
Sbjct: 170 tttggaatattttatgaggagatcaaccatgctggatctggaggaatatgggc 222
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| || | ||||||||||||||||||||||||
Sbjct: 403 tggtgttggagtctctaacccaggtttttggggcatgaa 441
>gb|BE202968.1|BE202968 EST402980 KV1 Medicago truncatula cDNA clone pKV1-3P1, mRNA sequence
Length = 562
Score = 56.0 bits (28), Expect = 7e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1132 cacttcggggatgtttggcattactggactgatgatgggcttggatattatgagtt 1187
|||||||| ||||| ||| | ||| ||||||||||||| ||||| |||||||||||
Sbjct: 48 cacttcggtgatgtatggaagtacgggactgatgatggacttggctattatgagtt 103
>gb|BI270386.1|BI270386 NF010G07FL1F1056 Developing flower Medicago truncatula cDNA clone
NF010G07FL 5', mRNA sequence
Length = 259
Score = 54.0 bits (27), Expect = 3e-005
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 439 tttgggatattttttgaggagatcaaccatgcaggagctggtggcatatgggcagagctt 498
||||| |||||| ||||||||||||| ||||| |||||||| || | ||||| ||||||
Sbjct: 198 tttggaatatttnttgaggagatcaatcatgctggagctgggggattgtgggctgagctt 257
Query: 499 gt 500
||
Sbjct: 258 gt 259
>gb|CB892038.1|CB892038 EST649007 KV3 Medicago truncatula cDNA clone KV3-53A7, mRNA
sequence
Length = 569
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 165 tggtgttggcgtttataaccctggtttctggggcatgaa 203
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 967 gacacatacaagggacatggtttccg 992
|||||||| |||||||||||||||||
Sbjct: 466 gacacatataagggacatggtttccg 491
>gb|CX535093.1|CX535093 s13dNF36H09MJ080_388365 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 505
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 194 tggtgttggcgtttataaccctggtttctggggcatgaa 232
Score = 40.1 bits (20), Expect = 0.42
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 493 gagcttgtcagtaacagaggtttcgaagctggaggc 528
|||||||| || |||||||| || ||||||||||||
Sbjct: 12 gagcttgtgagcaacagaggatttgaagctggaggc 47
>gb|CX542040.1|CX542040 s13dNF89D01GS014_467388 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 522
Score = 54.0 bits (27), Expect = 3e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 672 tggtgttggtgtttataacccaggtttttggggcatgaa 710
||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 178 tggtgttggcgtttataaccctggtttctggggcatgaa 216
Score = 44.1 bits (22), Expect = 0.027
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 967 gacacatacaagggacatggtttccg 992
|||||||| |||||||||||||||||
Sbjct: 479 gacacatataagggacatggtttccg 504
>gb|CG948580.1|CG948580 MBENM12TR mth2 Medicago truncatula genomic clone 9A23, DNA sequence
Length = 857
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 475 gctggtggcatatgggcaga 494
||||||||||||||||||||
Sbjct: 842 gctggtggcatatgggcaga 823
>gb|CG954520.1|CG954520 MBENE72TR mth2 Medicago truncatula genomic clone 7K23, DNA sequence
Length = 936
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 475 gctggtggcatatgggcaga 494
||||||||||||||||||||
Sbjct: 769 gctggtggcatatgggcaga 750
>gb|BI271948.1|BI271948 NF016G12FL1F1099 Developing flower Medicago truncatula cDNA clone
NF016G12FL 5', mRNA sequence
Length = 695
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 475 gctggtggcatatgggcaga 494
||||||||||||||||||||
Sbjct: 243 gctggtggcatatgggcaga 262
>gb|AC146341.10| Medicago truncatula clone mth2-10g1, complete sequence
Length = 147669
Score = 40.1 bits (20), Expect = 0.42
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 475 gctggtggcatatgggcaga 494
||||||||||||||||||||
Sbjct: 131603 gctggtggcatatgggcaga 131622
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 271,986
Number of Sequences: 392609
Number of extensions: 271986
Number of successful extensions: 19993
Number of sequences better than 0.5: 34
Number of HSP's better than 0.5 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19895
Number of HSP's gapped (non-prelim): 98
length of query: 1192
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1172
effective length of database: 433,880,813
effective search space: 508508312836
effective search space used: 508508312836
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)