BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8635646.2.1
(573 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW982540.3|AW982540 HVSMEg0003I17f Hordeum vulgare pre-a... 178 1e-043
gb|BG343189.2|BG343189 HVSMEg0005A17f Hordeum vulgare pre-a... 172 8e-042
gb|BQ465733.1|BQ465733 HU04I14r HU Hordeum vulgare subsp. v... 172 8e-042
gb|BQ467236.1|BQ467236 HS03B22r HS Hordeum vulgare subsp. v... 170 3e-041
gb|BQ663904.1|BQ663904 HU04I14u HU Hordeum vulgare subsp. v... 163 8e-039
gb|BQ765873.1|BQ765873 EBro03_SQ008_L11_R root, 3 week, wat... 141 3e-032
gb|CV063762.1|CV063762 BNEL92h4 Barley EST endosperm librar... 141 3e-032
gb|CK124817.1|CK124817 BES1824110h18 BES1824 Hordeum vulgar... 141 3e-032
gb|BF259589.2|BF259589 HVSMEf0019L18f Hordeum vulgare seedl... 135 2e-030
gb|CV057318.1|CV057318 BNEL26d9 Barley EST endosperm librar... 94 6e-018
gb|BQ767590.1|BQ767590 EBro08_SQ009_G08 _R root, 3 week, dr... 76 1e-012
gb|BM376755.2|BM376755 EBem05_SQ003_C09_R embryo, 14 DPA, n... 74 6e-012
gb|CA023521.1|CA023521 HZ46I01r HZ Hordeum vulgare subsp. v... 52 2e-005
gb|BI958166.1|BI958166 HVSMEn0013L07f Hordeum vulgare rachi... 40 0.077
gb|AL506017.1|AL506017 AL506017 Hordeum vulgare Barke devel... 38 0.31
gb|AL506871.1|AL506871 AL506871 Hordeum vulgare Barke devel... 38 0.31
gb|AL506946.1|AL506946 AL506946 Hordeum vulgare Barke devel... 38 0.31
gb|BF620870.2|BF620870 HVSMEa0003F20f Hordeum vulgare seedl... 38 0.31
gb|BF623996.2|BF623996 HVSMEa0008H08f Hordeum vulgare seedl... 38 0.31
gb|BF625477.2|BF625477 HVSMEa0009J02f Hordeum vulgare seedl... 38 0.31
gb|AW983006.1|AW983006 HVSMEg0004M16f Hordeum vulgare pre-a... 38 0.31
gb|BF628080.2|BF628080 HVSMEb0003B07f Hordeum vulgare seedl... 38 0.31
gb|BF629657.2|BF629657 HVSMEb0013A16f Hordeum vulgare seedl... 38 0.31
gb|BF255622.2|BF255622 HVSMEf0007F17f Hordeum vulgare seedl... 38 0.31
gb|BF259439.2|BF259439 HVSMEf0019B20f Hordeum vulgare seedl... 38 0.31
gb|BF260035.2|BF260035 HVSMEf0020O23f Hordeum vulgare seedl... 38 0.31
gb|BI949525.1|BI949525 HVSMEl0014G24f Hordeum vulgare spike... 38 0.31
gb|BI951759.1|BI951759 HVSMEm0002J06f Hordeum vulgare green... 38 0.31
gb|BI955546.1|BI955546 HVSMEm0023I11f Hordeum vulgare green... 38 0.31
gb|BE214183.2|BE214183 HV_CEb0002J06f Hordeum vulgare seedl... 38 0.31
gb|BE215623.2|BE215623 HV_CEb0007F12f Hordeum vulgare seedl... 38 0.31
gb|BI958613.1|BI958613 HVSMEn0015O11f Hordeum vulgare rachi... 38 0.31
gb|BE060576.3|BE060576 HVSMEg0012K20f Hordeum vulgare pre-a... 38 0.31
gb|BE196575.3|BE196575 HVSMEh0092K21f Hordeum vulgare 5-45 ... 38 0.31
gb|BG367145.2|BG367145 HVSMEi0011A03f Hordeum vulgare 20 DA... 38 0.31
gb|BG369529.2|BG369529 HVSMEi0024M14f Hordeum vulgare 20 DA... 38 0.31
gb|BG418320.2|BG418320 HVSMEk0022F01f Hordeum vulgare testa... 38 0.31
gb|AV914346.1|AV914346 AV914346 K. Sato unpublished cDNA li... 38 0.31
gb|AV917061.1|AV917061 AV917061 K. Sato unpublished cDNA li... 38 0.31
gb|AV923119.1|AV923119 AV923119 K. Sato unpublished cDNA li... 38 0.31
gb|BM444328.1|BM444328 EBem09_SQ004_N09_R embryo, 1 Day ger... 38 0.31
gb|BJ447215.1|BJ447215 BJ447215 K. Sato unpublished cDNA li... 38 0.31
gb|BJ447655.1|BJ447655 BJ447655 K. Sato unpublished cDNA li... 38 0.31
gb|BJ452863.1|BJ452863 BJ452863 K. Sato unpublished cDNA li... 38 0.31
gb|BQ464260.1|BQ464260 HF01M12T HF Hordeum vulgare subsp. v... 38 0.31
gb|BQ465225.1|BQ465225 HU02P23r HU Hordeum vulgare subsp. v... 38 0.31
gb|BQ466421.1|BQ466421 HT02H20r HT Hordeum vulgare subsp. v... 38 0.31
gb|BQ470859.1|BQ470859 HX04E04r HX Hordeum vulgare subsp. v... 38 0.31
gb|BQ471229.1|BQ471229 HV01L08T HV Hordeum vulgare subsp. v... 38 0.31
gb|BM368138.2|BM368138 EBed01_SQ002_E15_R endosperm, 6 DPA,... 38 0.31
gb|BM369183.2|BM369183 EBem07_SQ002_M24_R embryo, 28 DPA, n... 38 0.31
gb|BM372203.2|BM372203 EBro03_SQ004_F01_R root, 3 week, wat... 38 0.31
gb|BM372249.2|BM372249 EBro03_SQ004_G23_R root, 3 week, wat... 38 0.31
gb|BQ758891.1|BQ758891 EBma07_SQ003_J06_R maternal, 21 DPA,... 38 0.31
gb|BQ764565.1|BQ764565 EBca01_SQ004_B11_R carpel, pre-anthe... 38 0.31
gb|BQ767107.1|BQ767107 EBro08_SQ008_B02_R root, 3 week, dro... 38 0.31
gb|BU972632.1|BU972632 HB22E01r BC Hordeum vulgare subsp. v... 38 0.31
gb|BU977207.1|BU977207 HA11A11r HA Hordeum vulgare subsp. v... 38 0.31
gb|BU981800.1|BU981800 HA24K20r HA Hordeum vulgare subsp. v... 38 0.31
gb|BU982688.1|BU982688 HA27F02r HA Hordeum vulgare subsp. v... 38 0.31
gb|BU995869.1|BU995869 HM11K02r HM Hordeum vulgare subsp. v... 38 0.31
gb|BU997272.1|BU997272 HI07H13r HI Hordeum vulgare subsp. v... 38 0.31
gb|BU998237.1|BU998237 HI10G18r HI Hordeum vulgare subsp. v... 38 0.31
gb|CA000259.1|CA000259 HS09C06u HS Hordeum vulgare subsp. v... 38 0.31
gb|CA004727.1|CA004727 HS18I01r HS Hordeum vulgare subsp. v... 38 0.31
gb|CA006736.1|CA006736 HU05J03r HU Hordeum vulgare subsp. v... 38 0.31
gb|CA009399.1|CA009399 HU14A07r HU Hordeum vulgare subsp. v... 38 0.31
gb|CA009513.1|CA009513 HU14F10r HU Hordeum vulgare subsp. v... 38 0.31
gb|CA019009.1|CA019009 HV10G23r HV Hordeum vulgare subsp. v... 38 0.31
gb|CA019395.1|CA019395 HV11O06r HV Hordeum vulgare subsp. v... 38 0.31
gb|CA019828.1|CA019828 HV13F21r HV Hordeum vulgare subsp. v... 38 0.31
gb|CA022588.1|CA022588 HZ43L14r HZ Hordeum vulgare subsp. v... 38 0.31
gb|CA026140.1|CA026140 HZ55A06r HZ Hordeum vulgare subsp. v... 38 0.31
gb|CA032866.1|CA032866 HX14G20r HX Hordeum vulgare subsp. v... 38 0.31
gb|CB882164.1|CB882164 HL01B03w HL Hordeum vulgare subsp. v... 38 0.31
gb|CV053969.1|CV053969 BNEL105c12 Barley EST endosperm libr... 38 0.31
gb|CV054472.1|CV054472 BNEL10H3 Barley EST endosperm librar... 38 0.31
gb|CV054944.1|CV054944 BNEL115a6 Barley EST endosperm libra... 38 0.31
gb|CV056418.1|CV056418 BNEL17E2 Barley EST endosperm librar... 38 0.31
gb|CV060718.1|CV060718 BNEL60d3 Barley EST endosperm librar... 38 0.31
gb|CV061584.1|CV061584 BNEL6F11 Barley EST endosperm librar... 38 0.31
gb|CK122711.1|CK122711 BES1824105i18 BES1824 Hordeum vulgar... 38 0.31
gb|CK123507.1|CK123507 BES1824104d23 BES1824 Hordeum vulgar... 38 0.31
gb|CK123540.1|CK123540 BES1824104f16 BES1824 Hordeum vulgar... 38 0.31
gb|CK123542.1|CK123542 BES1824104f18 BES1824 Hordeum vulgar... 38 0.31
gb|CK123630.1|CK123630 BES1824104m07 BES1824 Hordeum vulgar... 38 0.31
gb|CK124012.1|CK124012 BES1824106h21 BES1824 Hordeum vulgar... 38 0.31
gb|CK125404.1|CK125404 BES1824107o14 BES1824 Hordeum vulgar... 38 0.31
>gb|AW982540.3|AW982540 HVSMEg0003I17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I17f, mRNA sequence
Length = 534
Score = 178 bits (90), Expect = 1e-043
Identities = 219/262 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 69 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 128
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 129 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 188
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 189 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 248
Query: 186 gctccctcgtctgccccgacaccagccgctgcttccccatcaacaagggcatccccaaca 245
|| ||||||| |||||||| | | |||||| |||||||||| |||||| ||||||| |
Sbjct: 249 gcaccctcgtttgccccgatagcggccgctccttccccatcctgaagggcgtccccaata 308
Query: 246 tgatgctccacgaggacgaggt 267
|| | |||||||||||||||||
Sbjct: 309 tgcttctccacgaggacgaggt 330
>gb|BG343189.2|BG343189 HVSMEg0005A17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005A17f, mRNA sequence
Length = 958
Score = 172 bits (87), Expect = 8e-042
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 231 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 290
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 291 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 350
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 351 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 410
Query: 186 gctccctcgtctgccccgacaccagccgctgcttccccatcaacaagggcatccccaaca 245
|| ||||||| |||||||| | | |||||| |||||||||| |||||| ||| ||| |
Sbjct: 411 gcaccctcgtttgccccgatagcggccgctccttccccatcctgaagggcgtccncaata 470
Query: 246 tgatgctccacgaggacgaggt 267
|| | |||||||||||||||||
Sbjct: 471 tgcttctccacgaggacgaggt 492
>gb|BQ465733.1|BQ465733 HU04I14r HU Hordeum vulgare subsp. vulgare cDNA clone HU04I14
5-PRIME, mRNA sequence
Length = 507
Score = 172 bits (87), Expect = 8e-042
Identities = 218/262 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 216 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 275
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 276 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 335
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||| ||| | || ||| | ||||
Sbjct: 336 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctngagatccacgtcgaagagg 395
Query: 186 gctccctcgtctgccccgacaccagccgctgcttccccatcaacaagggcatccccaaca 245
|| ||||||| |||||||| | | |||||| |||||||||| |||||| ||||||| |
Sbjct: 396 gcaccctcgtttgccccgatagcggccgctccttccccatcctgaagggcgtccccaata 455
Query: 246 tgatgctccacgaggacgaggt 267
|| | |||||||||||||||||
Sbjct: 456 tgcttctccacgaggacgaggt 477
>gb|BQ467236.1|BQ467236 HS03B22r HS Hordeum vulgare subsp. vulgare cDNA clone HS03B22
5-PRIME, mRNA sequence
Length = 539
Score = 170 bits (86), Expect = 3e-041
Identities = 215/258 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 282 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 341
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 342 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 401
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 402 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 461
Query: 186 gctccctcgtctgccccgacaccagccgctgcttccccatcaacaagggcatccccaaca 245
|| ||||||| |||||||| | | |||||| |||||||||| |||||| ||||||| |
Sbjct: 462 gcaccctcgtttgccccgatagcggccgctccttccccatcctgaagggcgtccccaata 521
Query: 246 tgatgctccacgaggacg 263
|| | |||||||||||||
Sbjct: 522 tgcttctccacgaggacg 539
>gb|BQ663904.1|BQ663904 HU04I14u HU Hordeum vulgare subsp. vulgare cDNA clone HU04I14
3-PRIME, mRNA sequence
Length = 499
Score = 163 bits (82), Expect = 8e-039
Identities = 217/262 (82%)
Strand = Plus / Minus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 413 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 354
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | |||||| || ||||||| ||| | |||||||| |||||||| ||||
Sbjct: 353 agctgctcgcggcggagcaaccgcccgaggcagagcttttcgccgagggcgccgcggacg 294
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 293 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 234
Query: 186 gctccctcgtctgccccgacaccagccgctgcttccccatcaacaagggcatccccaaca 245
|| ||||||| |||||||| | | |||||| |||||||||| |||||| ||||||| |
Sbjct: 233 gcaccctcgtttgccccgatagcggccgctccttccccatcctgaagggcgtccccaata 174
Query: 246 tgatgctccacgaggacgaggt 267
|| | |||||||||||||||||
Sbjct: 173 tgcttctccacgaggacgaggt 152
>gb|BQ765873.1|BQ765873 EBro03_SQ008_L11_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_L11 5', mRNA sequence
Length = 433
Score = 141 bits (71), Expect = 3e-032
Identities = 167/199 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 223 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 282
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 283 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 342
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 343 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 402
Query: 186 gctccctcgtctgccccga 204
|| ||||||| ||||||||
Sbjct: 403 gcaccctcgtttgccccga 421
>gb|CV063762.1|CV063762 BNEL92h4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL92h4 5' similar to unknown
protein, mRNA sequence
Length = 470
Score = 141 bits (71), Expect = 3e-032
Identities = 167/199 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 270 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 329
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 330 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 389
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 390 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 449
Query: 186 gctccctcgtctgccccga 204
|| ||||||| ||||||||
Sbjct: 450 gcaccctcgtttgccccga 468
>gb|CK124817.1|CK124817 BES1824110h18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H1810 5-PRIME, mRNA sequence
Length = 432
Score = 141 bits (71), Expect = 3e-032
Identities = 167/199 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 232 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 291
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 292 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 351
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||||||| | || ||| | ||||
Sbjct: 352 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctcgagatccacgtcgaagagg 411
Query: 186 gctccctcgtctgccccga 204
|| ||||||| ||||||||
Sbjct: 412 gcaccctcgtttgccccga 430
>gb|BF259589.2|BF259589 HVSMEf0019L18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019L18f, mRNA sequence
Length = 572
Score = 135 bits (68), Expect = 2e-030
Identities = 166/199 (83%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 190 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 249
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 250 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 309
Query: 126 tcgagggaagcgccatccgccgcatccaccacgcgctcctcgaggttcatgtccaggagg 185
|||| || ||||| ||||||||| |||||||||||||||| ||| | || ||| | ||||
Sbjct: 310 tcgaaggcagcgcgatccgccgcctccaccacgcgctcctngagatccacgtcgaagagg 369
Query: 186 gctccctcgtctgccccga 204
|| ||||||| ||||||||
Sbjct: 370 gcaccctcgtttgccccga 388
>gb|CV057318.1|CV057318 BNEL26d9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL26d9 5' similar to Oryza sativa,
mRNA sequence
Length = 480
Score = 93.7 bits (47), Expect = 6e-018
Identities = 131/158 (82%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 271 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 330
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 331 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 390
Query: 126 tcgagggaagcgcca-tccgccgcatccaccacgcgct 162
|||| || ||||| | ||||||| |||||||||||||
Sbjct: 391 tcgaaggcagcgcgattccgccgnctccaccacgcgct 428
>gb|BQ767590.1|BQ767590 EBro08_SQ009_G08 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_G08 5', mRNA sequence
Length = 368
Score = 75.8 bits (38), Expect = 1e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 247 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 306
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 307 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 366
Query: 126 tc 127
||
Sbjct: 367 tc 368
>gb|BM376755.2|BM376755 EBem05_SQ003_C09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_C09 5', mRNA sequence
Length = 390
Score = 73.8 bits (37), Expect = 6e-012
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgcggtcggcctccctg 65
|||| ||||||||||||||||| |||||| ||||||| ||| |||| | || |||| |
Sbjct: 270 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgccgctgggttcccgg 329
Query: 66 agctcctccccgaggagcagccccccgaggaggagatcttcgccgacggcgccgccgacg 125
|||| ||| | | ||||||||| ||||||| ||| |||||||||| |||||||| ||||
Sbjct: 330 agctgctcgcggcggagcagccgcccgaggcagagctcttcgccgagggcgccgcggacg 389
Query: 126 t 126
|
Sbjct: 390 t 390
>gb|CA023521.1|CA023521 HZ46I01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46I01
5-PRIME, mRNA sequence
Length = 354
Score = 52.0 bits (26), Expect = 2e-005
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 6 tcctccccaagatcgactggcgcgcgctcgtcgccgccacccgcgc 51
|||| ||||||||||||||||| |||||| ||||||| ||| ||||
Sbjct: 287 tccttcccaagatcgactggcgggcgctcttcgccgcgaccagcgc 332
>gb|BI958166.1|BI958166 HVSMEn0013L07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013L07f, mRNA sequence
Length = 851
Score = 40.1 bits (20), Expect = 0.077
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 106 cgccgacggcgccgccgacgtcga 129
|||||||| |||||||||||||||
Sbjct: 230 cgccgacgacgccgccgacgtcga 207
>gb|AL506017.1|AL506017 AL506017 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01I03T 5',
mRNA sequence
Length = 700
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 110 gcgctcgtcgccgccaccc 128
>gb|AL506871.1|AL506871 AL506871 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04H22T 5',
mRNA sequence
Length = 700
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 110 gcgctcgtcgccgccaccc 128
>gb|AL506946.1|AL506946 AL506946 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04L09T 5',
mRNA sequence
Length = 700
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 105 gcgctcgtcgccgccaccc 123
>gb|BF620870.2|BF620870 HVSMEa0003F20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003F20f, mRNA sequence
Length = 843
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 113 gcgctcgtcgccgccaccc 131
>gb|BF623996.2|BF623996 HVSMEa0008H08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008H08f, mRNA sequence
Length = 501
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 114 gcgctcgtcgccgccaccc 132
>gb|BF625477.2|BF625477 HVSMEa0009J02f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009J02f, mRNA sequence
Length = 474
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 114 gcgctcgtcgccgccaccc 132
>gb|AW983006.1|AW983006 HVSMEg0004M16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004M16f, mRNA sequence
Length = 572
Score = 38.2 bits (19), Expect = 0.31
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 19 cgactggcgcgcgctcgtcgccg 41
|||||||| ||||||||||||||
Sbjct: 196 cgactggctcgcgctcgtcgccg 218
>gb|BF628080.2|BF628080 HVSMEb0003B07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003B07f, mRNA sequence
Length = 526
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 112 gcgctcgtcgccgccaccc 130
>gb|BF629657.2|BF629657 HVSMEb0013A16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013A16f, mRNA sequence
Length = 876
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 120 gcgctcgtcgccgccaccc 138
>gb|BF255622.2|BF255622 HVSMEf0007F17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007F17f, mRNA sequence
Length = 830
Score = 38.2 bits (19), Expect = 0.31
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 19 cgactggcgcgcgctcgtcgccg 41
|||||||| ||||||||||||||
Sbjct: 276 cgactggctcgcgctcgtcgccg 298
>gb|BF259439.2|BF259439 HVSMEf0019B20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019B20f, mRNA sequence
Length = 577
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 114 gcgctcgtcgccgccaccc 132
>gb|BF260035.2|BF260035 HVSMEf0020O23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020O23f, mRNA sequence
Length = 534
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 125 gcgctcgtcgccgccaccc 143
>gb|BI949525.1|BI949525 HVSMEl0014G24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0014G24f, mRNA sequence
Length = 876
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 126 gcgctcgtcgccgccaccc 144
>gb|BI951759.1|BI951759 HVSMEm0002J06f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0002J06f, mRNA sequence
Length = 827
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 114 gcgctcgtcgccgccaccc 132
>gb|BI955546.1|BI955546 HVSMEm0023I11f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023I11f, mRNA sequence
Length = 661
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 116 gcgctcgtcgccgccaccc 134
>gb|BE214183.2|BE214183 HV_CEb0002J06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002J06f, mRNA sequence
Length = 930
Score = 38.2 bits (19), Expect = 0.31
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 19 cgactggcgcgcgctcgtcgccg 41
|||||||| ||||||||||||||
Sbjct: 220 cgactggctcgcgctcgtcgccg 242
>gb|BE215623.2|BE215623 HV_CEb0007F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007F12f, mRNA sequence
Length = 528
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 104 gcgctcgtcgccgccaccc 122
>gb|BI958613.1|BI958613 HVSMEn0015O11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015O11f, mRNA sequence
Length = 632
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 103 gcgctcgtcgccgccaccc 121
>gb|BE060576.3|BE060576 HVSMEg0012K20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012K20f, mRNA sequence
Length = 724
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 113 gcgctcgtcgccgccaccc 131
>gb|BE196575.3|BE196575 HVSMEh0092K21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092K21f, mRNA sequence
Length = 932
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 71 gcgctcgtcgccgccaccc 89
>gb|BG367145.2|BG367145 HVSMEi0011A03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011A03f, mRNA sequence
Length = 823
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 113 gcgctcgtcgccgccaccc 131
>gb|BG369529.2|BG369529 HVSMEi0024M14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024M14f, mRNA sequence
Length = 866
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 113 gcgctcgtcgccgccaccc 131
>gb|BG418320.2|BG418320 HVSMEk0022F01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022F01f, mRNA sequence
Length = 794
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 93 gcgctcgtcgccgccaccc 111
>gb|AV914346.1|AV914346 AV914346 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5m06 5', mRNA sequence
Length = 499
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 129 gcgctcgtcgccgccaccc 147
>gb|AV917061.1|AV917061 AV917061 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20k02 5', mRNA sequence
Length = 383
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 120 gcgctcgtcgccgccaccc 138
>gb|AV923119.1|AV923119 AV923119 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3o01 5', mRNA sequence
Length = 433
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 119 gcgctcgtcgccgccaccc 137
>gb|BM444328.1|BM444328 EBem09_SQ004_N09_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_N09 5', mRNA sequence
Length = 609
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 108 gcgctcgtcgccgccaccc 126
>gb|BJ447215.1|BJ447215 BJ447215 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak14i03 5', mRNA sequence
Length = 556
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 132 gcgctcgtcgccgccaccc 150
>gb|BJ447655.1|BJ447655 BJ447655 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l23 5', mRNA sequence
Length = 608
Score = 38.2 bits (19), Expect = 0.31
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 19 cgactggcgcgcgctcgtcgccg 41
|||||||| ||||||||||||||
Sbjct: 65 cgactggctcgcgctcgtcgccg 87
>gb|BJ452863.1|BJ452863 BJ452863 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40l15 5', mRNA sequence
Length = 539
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 31 gcgctcgtcgccgccaccc 49
>gb|BQ464260.1|BQ464260 HF01M12T HF Hordeum vulgare subsp. vulgare cDNA clone HF01M12
5-PRIME, mRNA sequence
Length = 683
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 124 gcgctcgtcgccgccaccc 142
>gb|BQ465225.1|BQ465225 HU02P23r HU Hordeum vulgare subsp. vulgare cDNA clone HU02P23
5-PRIME, mRNA sequence
Length = 584
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 111 gcgctcgtcgccgccaccc 129
>gb|BQ466421.1|BQ466421 HT02H20r HT Hordeum vulgare subsp. vulgare cDNA clone HT02H20
5-PRIME, mRNA sequence
Length = 398
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 105 tcgccgacggcgccgccga 123
|||||||||||||||||||
Sbjct: 37 tcgccgacggcgccgccga 55
>gb|BQ470859.1|BQ470859 HX04E04r HX Hordeum vulgare subsp. vulgare cDNA clone HX04E04
5-PRIME, mRNA sequence
Length = 642
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 126 gcgctcgtcgccgccaccc 144
>gb|BQ471229.1|BQ471229 HV01L08T HV Hordeum vulgare subsp. vulgare cDNA clone HV01L08
5-PRIME, mRNA sequence
Length = 480
Score = 38.2 bits (19), Expect = 0.31
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 19 cgactggcgcgcgctcgtcgccg 41
|||||||| ||||||||||||||
Sbjct: 386 cgactggctcgcgctcgtcgccg 408
>gb|BM368138.2|BM368138 EBed01_SQ002_E15_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_E15 5', mRNA sequence
Length = 528
Score = 38.2 bits (19), Expect = 0.31
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 29 gcgctcgtcgccgccaccc 47
|||||||||||||||||||
Sbjct: 99 gcgctcgtcgccgccaccc 117
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 87,519
Number of Sequences: 312970
Number of extensions: 87519
Number of successful extensions: 27734
Number of sequences better than 0.5: 88
Number of HSP's better than 0.5 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27632
Number of HSP's gapped (non-prelim): 92
length of query: 573
length of database: 175,134,539
effective HSP length: 19
effective length of query: 554
effective length of database: 169,188,109
effective search space: 93730212386
effective search space used: 93730212386
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)