BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440570.2.2
(905 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL506939.1|AL506939 AL506939 Hordeum vulgare Barke devel... 620 e-176
gb|BE602150.2|BE602150 HVSMEh0102M04f Hordeum vulgare 5-45 ... 620 e-176
gb|AV936748.1|AV936748 AV936748 K. Sato unpublished cDNA li... 620 e-176
gb|BQ764842.1|BQ764842 EBca01_SQ005_F02_R carpel, pre-anthe... 620 e-176
gb|CA013022.1|CA013022 HT07C16r HT Hordeum vulgare subsp. v... 617 e-175
gb|AV919247.1|AV919247 AV919247 K. Sato unpublished cDNA li... 615 e-174
gb|CK122291.1|CK122291 BES1824102m01 BES1824 Hordeum vulgar... 615 e-174
gb|AV914207.1|AV914207 AV914207 K. Sato unpublished cDNA li... 607 e-172
gb|BJ454353.1|BJ454353 BJ454353 K. Sato unpublished cDNA li... 605 e-171
gb|CA013879.1|CA013879 HT09M01r HT Hordeum vulgare subsp. v... 603 e-171
gb|CA031123.1|CA031123 HX09B09r HX Hordeum vulgare subsp. v... 603 e-171
gb|CA031784.1|CA031784 HX11C02r HX Hordeum vulgare subsp. v... 603 e-171
gb|CV057277.1|CV057277 BNEL26a2 Barley EST endosperm librar... 597 e-169
gb|BG343542.1|BG343542 HVSMEg0006F12f Hordeum vulgare pre-a... 589 e-167
gb|AV934278.1|AV934278 AV934278 K. Sato unpublished cDNA li... 589 e-167
gb|CV059672.1|CV059672 BNEL4F8 Barley EST endosperm library... 589 e-167
gb|BU978921.1|BU978921 HA14K10r HA Hordeum vulgare subsp. v... 587 e-166
gb|CV061335.1|CV061335 BNEL67f4 Barley EST endosperm librar... 583 e-165
gb|BU978046.1|BU978046 HA12H18r HA Hordeum vulgare subsp. v... 581 e-164
gb|CK125500.1|CK125500 BES1824108m14 BES1824 Hordeum vulgar... 581 e-164
gb|AV933195.1|AV933195 AV933195 K. Sato unpublished cDNA li... 579 e-164
gb|BJ471147.1|BJ471147 BJ471147 K. Sato unpublished cDNA li... 575 e-163
gb|BQ458700.1|BQ458700 HA04H18r HA Hordeum vulgare subsp. v... 575 e-163
gb|BQ459597.1|BQ459597 HA08K13r HA Hordeum vulgare subsp. v... 575 e-163
gb|BM370156.2|BM370156 EBro08_SQ003_C16_R root, 3 week, dro... 575 e-163
gb|BU982839.1|BU982839 HA27M06r HA Hordeum vulgare subsp. v... 575 e-163
gb|BU989855.1|BU989855 HF22O04r HF Hordeum vulgare subsp. v... 575 e-163
gb|CA019512.1|CA019512 HV12D11r HV Hordeum vulgare subsp. v... 575 e-163
gb|CK125351.1|CK125351 BES1824107m06 BES1824 Hordeum vulgar... 567 e-160
gb|BG343847.1|BG343847 HVSMEg0006O16f Hordeum vulgare pre-a... 565 e-160
gb|BU976861.1|BU976861 HA10H03r HA Hordeum vulgare subsp. v... 565 e-160
gb|CA018350.1|CA018350 HV08F24r HV Hordeum vulgare subsp. v... 563 e-159
gb|BQ471559.1|BQ471559 HV02M17r HV Hordeum vulgare subsp. v... 553 e-156
gb|BI778124.2|BI778124 EBro07_SQ002_E18_R root, 3 week, red... 553 e-156
gb|BI778592.2|BI778592 EBro07_SQ003_L22_R root, 3 week, red... 553 e-156
gb|BU976772.1|BU976772 HA10E16r HA Hordeum vulgare subsp. v... 553 e-156
gb|BU978459.1|BU978459 HA13E18r HA Hordeum vulgare subsp. v... 553 e-156
gb|BU978754.1|BU978754 HA14C20r HA Hordeum vulgare subsp. v... 553 e-156
gb|CV054364.1|CV054364 BNEL109f7 Barley EST endosperm libra... 551 e-155
gb|BQ135343.1|BQ135343 LP10074 Lemma/palea-enriched cDNA li... 549 e-155
gb|BQ768758.1|BQ768758 EBro08_SQ012_H18_R root, 3 week, dro... 549 e-155
gb|CV063934.1|CV063934 BNEL94h10 Barley EST endosperm libra... 545 e-154
gb|BI778501.2|BI778501 EBro07_SQ003_H16_R root, 3 week, red... 543 e-153
gb|BQ767131.1|BQ767131 EBro08_SQ008_F02_R root, 3 week, dro... 543 e-153
gb|BU979485.1|BU979485 HA16F02r HA Hordeum vulgare subsp. v... 543 e-153
gb|AV933307.1|AV933307 AV933307 K. Sato unpublished cDNA li... 537 e-151
gb|AV936754.1|AV936754 AV936754 K. Sato unpublished cDNA li... 535 e-151
gb|CV062378.1|CV062378 BNEL79d12 Barley EST endosperm libra... 535 e-151
gb|BQ464242.1|BQ464242 HF01L18T HF Hordeum vulgare subsp. v... 533 e-150
gb|BU983328.1|BU983328 HA29F18r HA Hordeum vulgare subsp. v... 529 e-149
gb|CA032965.1|CA032965 HX14L13r HX Hordeum vulgare subsp. v... 527 e-148
gb|BG344234.2|BG344234 HVSMEg0008E12f Hordeum vulgare pre-a... 525 e-148
gb|AV935799.1|AV935799 AV935799 K. Sato unpublished cDNA li... 523 e-147
gb|CV060336.1|CV060336 BNEL57a3 Barley EST endosperm librar... 523 e-147
gb|AV933357.1|AV933357 AV933357 K. Sato unpublished cDNA li... 521 e-146
gb|BJ473776.1|BJ473776 BJ473776 K. Sato unpublished cDNA li... 521 e-146
gb|AV936534.1|AV936534 AV936534 K. Sato unpublished cDNA li... 519 e-146
gb|CV058568.1|CV058568 BNEL39d6 Barley EST endosperm librar... 519 e-146
gb|BM371894.2|BM371894 EBma08_SQ004_F19_R maternal, 28 DPA,... 513 e-144
gb|CV057808.1|CV057808 BNEL31a8 Barley EST endosperm librar... 513 e-144
gb|CA001574.1|CA001574 HS17F10u HS Hordeum vulgare subsp. v... 507 e-142
gb|BQ764834.1|BQ764834 EBca01_SQ005_D06_R carpel, pre-anthe... 502 e-140
gb|AJ436336.1|AJ436336 AJ436336 S00002 Hordeum vulgare subs... 498 e-139
gb|BI954832.1|BI954832 HVSMEm0019P18f Hordeum vulgare green... 492 e-137
gb|BM375743.2|BM375743 EBem06_SQ004_E15_R embryo, 21 DPA, n... 490 e-137
gb|CV054026.1|CV054026 BNEL105h7 Barley EST endosperm libra... 490 e-137
gb|BM377349.2|BM377349 EBem05_SQ004_N19_R embryo, 14 DPA, n... 488 e-136
gb|CV056528.1|CV056528 BNEL18G7 Barley EST endosperm librar... 488 e-136
gb|AV935750.1|AV935750 AV935750 K. Sato unpublished cDNA li... 482 e-134
gb|BU989701.1|BU989701 HF22H09r HF Hordeum vulgare subsp. v... 478 e-133
gb|BU989804.1|BU989804 HF22L23r HF Hordeum vulgare subsp. v... 478 e-133
gb|BU982329.1|BU982329 HA26D05r HA Hordeum vulgare subsp. v... 476 e-133
gb|CV058392.1|CV058392 BNEL37e7 Barley EST endosperm librar... 476 e-133
gb|BU967494.1|BU967494 HB04H05r BC Hordeum vulgare subsp. v... 468 e-130
gb|BQ460477.1|BQ460477 HA09H03r HA Hordeum vulgare subsp. v... 466 e-130
gb|BU995863.1|BU995863 HM11J20r HM Hordeum vulgare subsp. v... 464 e-129
gb|CA025033.1|CA025033 HZ51A13r HZ Hordeum vulgare subsp. v... 464 e-129
gb|CA025110.1|CA025110 HZ51D20r HZ Hordeum vulgare subsp. v... 464 e-129
gb|AW983358.3|AW983358 HVSMEg0010F13f Hordeum vulgare pre-a... 460 e-128
gb|BJ462463.1|BJ462463 BJ462463 K. Sato unpublished cDNA li... 454 e-126
gb|BM099421.2|BM099421 EBes01_SQ003_D07_R embryo sac, 4-6 D... 438 e-121
gb|AV935143.1|AV935143 AV935143 K. Sato unpublished cDNA li... 436 e-121
gb|AV935144.1|AV935144 AV935144 K. Sato unpublished cDNA li... 436 e-121
gb|AV935645.1|AV935645 AV935645 K. Sato unpublished cDNA li... 436 e-121
gb|AJ463448.1|AJ463448 AJ463448 S00002 Hordeum vulgare subs... 436 e-121
gb|AJ463450.1|AJ463450 AJ463450 S00002 Hordeum vulgare subs... 436 e-121
gb|BJ462156.1|BJ462156 BJ462156 K. Sato unpublished cDNA li... 436 e-121
gb|BQ762867.1|BQ762867 EBro02_SQ006_I10_R root, 3 week, hyd... 436 e-121
gb|BQ765363.1|BQ765363 EBro03_SQ006_O23_R root, 3 week, wat... 436 e-121
gb|BU990491.1|BU990491 HF25D09r HF Hordeum vulgare subsp. v... 436 e-121
gb|CA000812.1|CA000812 HS06N09u HS Hordeum vulgare subsp. v... 436 e-121
gb|CA016531.1|CA016531 HV08F24u HV Hordeum vulgare subsp. v... 436 e-121
gb|CB875696.1|CB875696 HX09B09w HX Hordeum vulgare subsp. v... 436 e-121
gb|CB876387.1|CB876387 HX11C02w HX Hordeum vulgare subsp. v... 436 e-121
gb|AV932300.1|AV932300 AV932300 K. Sato unpublished cDNA li... 432 e-120
gb|BI779913.2|BI779913 EBem07_SQ001_J03_R embryo, 28 DPA, n... 432 e-120
gb|AJ463558.1|AJ463558 AJ463558 S00002 Hordeum vulgare subs... 428 e-118
gb|BU976773.1|BU976773 HA10E16u HA Hordeum vulgare subsp. v... 428 e-118
gb|CA026526.1|CA026526 HZ56C18r HZ Hordeum vulgare subsp. v... 428 e-118
gb|CA026545.1|CA026545 HZ56D14r HZ Hordeum vulgare subsp. v... 428 e-118
gb|AJ463449.1|AJ463449 AJ463449 S00002 Hordeum vulgare subs... 424 e-117
gb|BU979192.1|BU979192 HA15G17r HA Hordeum vulgare subsp. v... 422 e-117
gb|BF254234.3|BF254234 HVSMEf0003G09f Hordeum vulgare seedl... 420 e-116
gb|BM368095.2|BM368095 EBed01_SQ002_C16_R endosperm, 6 DPA,... 412 e-114
gb|CV058518.1|CV058518 BNEL38h3 Barley EST endosperm librar... 412 e-114
gb|BG416508.1|BG416508 HVSMEk0012K12f Hordeum vulgare testa... 404 e-111
gb|CA012061.1|CA012061 HT04F08r HT Hordeum vulgare subsp. v... 404 e-111
gb|BF258436.2|BF258436 HVSMEf0015L13f Hordeum vulgare seedl... 402 e-111
gb|CA023743.1|CA023743 HZ47E12r HZ Hordeum vulgare subsp. v... 394 e-108
gb|AV932301.1|AV932301 AV932301 K. Sato unpublished cDNA li... 392 e-108
gb|BQ656443.1|BQ656443 HA04H18u HA Hordeum vulgare subsp. v... 389 e-106
gb|BQ658065.1|BQ658065 HA05O07u HA Hordeum vulgare subsp. v... 389 e-106
gb|BQ664305.1|BQ664305 HV02M17u HV Hordeum vulgare subsp. v... 389 e-106
gb|BM097891.2|BM097891 EBpi03_SQ001_P07_R pistil, 4 DPA, no... 389 e-106
gb|CB882016.1|CB882016 HM11J20w HM Hordeum vulgare subsp. v... 389 e-106
gb|AJ463451.1|AJ463451 AJ463451 S00002 Hordeum vulgare subs... 387 e-106
gb|AL510360.1|AL510360 AL510360 Hordeum vulgare Barke devel... 385 e-105
gb|CA017700.1|CA017700 HV05P11r HV Hordeum vulgare subsp. v... 381 e-104
gb|BQ763126.1|BQ763126 EBro02_SQ007_E11_R root, 3 week, hyd... 379 e-103
gb|BF627260.2|BF627260 HVSMEb0004G03f Hordeum vulgare seedl... 365 2e-099
gb|BG418403.2|BG418403 HVSMEk0022J07f Hordeum vulgare testa... 365 2e-099
gb|BQ460366.1|BQ460366 HA09O18r HA Hordeum vulgare subsp. v... 365 2e-099
gb|BU977345.1|BU977345 HA11E06r HA Hordeum vulgare subsp. v... 365 2e-099
gb|CA009098.1|CA009098 HU13C18r HU Hordeum vulgare subsp. v... 365 2e-099
gb|BM442927.2|BM442927 EBro02_SQ001_O04_R root, 3 week, hyd... 363 7e-099
gb|BU998242.1|BU998242 HI10G24r HI Hordeum vulgare subsp. v... 363 7e-099
gb|CA029760.1|CA029760 HX05C06r HX Hordeum vulgare subsp. v... 363 7e-099
gb|CA029893.1|CA029893 HX05I04r HX Hordeum vulgare subsp. v... 363 7e-099
gb|CA031805.1|CA031805 HX11C24r HX Hordeum vulgare subsp. v... 363 7e-099
gb|AL509400.1|AL509400 AL509400 Hordeum vulgare Barke devel... 357 4e-097
gb|AV933035.1|AV933035 AV933035 K. Sato unpublished cDNA li... 355 2e-096
gb|AJ463452.1|AJ463452 AJ463452 S00002 Hordeum vulgare subs... 355 2e-096
gb|CA028584.1|CA028584 HZ62I08r HZ Hordeum vulgare subsp. v... 353 6e-096
gb|BU979070.1|BU979070 HA15B06r HA Hordeum vulgare subsp. v... 347 4e-094
gb|BU998287.1|BU998287 HI10J07r HI Hordeum vulgare subsp. v... 347 4e-094
gb|BQ470360.1|BQ470360 HX02L09r HX Hordeum vulgare subsp. v... 345 2e-093
gb|BU990707.1|BU990707 HF25N06r HF Hordeum vulgare subsp. v... 343 6e-093
gb|BU979960.1|BU979960 HA17P09r HA Hordeum vulgare subsp. v... 341 2e-092
gb|AJ460241.1|AJ460241 AJ460241 S00002 Hordeum vulgare subs... 339 1e-091
gb|BU980097.1|BU980097 HA18J04r HA Hordeum vulgare subsp. v... 337 4e-091
gb|BQ657155.1|BQ657155 HA09H03u HA Hordeum vulgare subsp. v... 333 6e-090
gb|CA018031.1|CA018031 HV07D06r HV Hordeum vulgare subsp. v... 333 6e-090
gb|BQ469660.1|BQ469660 HZ01H18r HZ Hordeum vulgare subsp. v... 331 2e-089
gb|AJ434208.1|AJ434208 AJ434208 S00002 Hordeum vulgare subs... 329 9e-089
gb|AV913597.1|AV913597 AV913597 K. Sato unpublished cDNA li... 325 1e-087
gb|AL505846.1|AL505846 AL505846 Hordeum vulgare Barke roots... 323 6e-087
gb|CK123379.1|CK123379 BES1824103m02 BES1824 Hordeum vulgar... 323 6e-087
gb|CA002209.1|CA002209 HS06N09r HS Hordeum vulgare subsp. v... 321 2e-086
gb|CA022550.1|CA022550 HZ43J15r HZ Hordeum vulgare subsp. v... 319 9e-086
gb|BU978047.1|BU978047 HA12H18u HA Hordeum vulgare subsp. v... 313 6e-084
gb|BI948222.1|BI948222 HVSMEl0008K16f Hordeum vulgare spike... 311 2e-083
gb|CA015764.1|CA015764 HV12D11u HV Hordeum vulgare subsp. v... 297 3e-079
gb|BU971281.1|BU971281 HB17C13r BC Hordeum vulgare subsp. v... 293 5e-078
gb|AJ463447.1|AJ463447 AJ463447 S00002 Hordeum vulgare subs... 287 3e-076
gb|BJ452177.1|BJ452177 BJ452177 K. Sato unpublished cDNA li... 281 2e-074
gb|BQ470577.1|BQ470577 HX03G08r HX Hordeum vulgare subsp. v... 280 8e-074
gb|CA025841.1|CA025841 HZ53E20r HZ Hordeum vulgare subsp. v... 274 5e-072
gb|BM373292.2|BM373292 EBma04_SQ003_N23_R maternal, 10 DPA,... 272 2e-071
gb|BU979856.1|BU979856 HA17I22r HA Hordeum vulgare subsp. v... 272 2e-071
gb|CV062733.1|CV062733 BNEL82d12 Barley EST endosperm libra... 266 1e-069
gb|BG416306.1|BG416306 HVSMEk0011C24f Hordeum vulgare testa... 256 1e-066
gb|BQ469398.1|BQ469398 HM04H19r HM Hordeum vulgare subsp. v... 254 4e-066
gb|AV918900.1|AV918900 AV918900 K. Sato unpublished cDNA li... 246 1e-063
gb|AV933201.1|AV933201 AV933201 K. Sato unpublished cDNA li... 246 1e-063
gb|BJ456936.1|BJ456936 BJ456936 K. Sato unpublished cDNA li... 246 1e-063
gb|BM097568.2|BM097568 EBem04_SQ002_B04_R embryo, 12 DPA, n... 236 1e-060
gb|BM369591.2|BM369591 EBem07_SQ004_B02_R embryo, 28 DPA, n... 236 1e-060
gb|BF253836.2|BF253836 HVSMEf0002E04f Hordeum vulgare seedl... 232 2e-059
gb|BJ459730.1|BJ459730 BJ459730 K. Sato unpublished cDNA li... 230 6e-059
gb|BQ765813.1|BQ765813 EBro03_SQ008_B09_R root, 3 week, wat... 230 6e-059
gb|BU994700.1|BU994700 HM07O12r HM Hordeum vulgare subsp. v... 230 6e-059
gb|CB874518.1|CB874518 HX05I04w HX Hordeum vulgare subsp. v... 230 6e-059
gb|CB880234.1|CB880234 HM05O12w HM Hordeum vulgare subsp. v... 230 6e-059
gb|CV060273.1|CV060273 BNEL56d1 Barley EST endosperm librar... 230 6e-059
gb|BG414786.2|BG414786 HVSMEk0003L13f Hordeum vulgare testa... 228 3e-058
gb|BQ657044.1|BQ657044 HA09O18u HA Hordeum vulgare subsp. v... 228 3e-058
gb|BQ657440.1|BQ657440 HA08G03u HA Hordeum vulgare subsp. v... 228 3e-058
gb|BQ665241.1|BQ665241 HX02L09u HX Hordeum vulgare subsp. v... 228 3e-058
gb|BQ665390.1|BQ665390 HX03G08u HX Hordeum vulgare subsp. v... 228 3e-058
gb|BM369445.2|BM369445 EBem07_SQ003_J16_R embryo, 28 DPA, n... 228 3e-058
gb|BU977346.1|BU977346 HA11E06u HA Hordeum vulgare subsp. v... 228 3e-058
gb|CB859432.1|CB859432 HI10G24w HI Hordeum vulgare subsp. v... 228 3e-058
gb|CB876406.1|CB876406 HX11C24w HX Hordeum vulgare subsp. v... 228 3e-058
gb|CD663736.1|CD663736 UCRHV18_06bh08_b1 Drought-stressed D... 228 3e-058
gb|CV054900.1|CV054900 BNEL114e7 Barley EST endosperm libra... 228 3e-058
gb|CV055276.1|CV055276 BNEL118g4 Barley EST endosperm libra... 228 3e-058
gb|CV055991.1|CV055991 BNEL12G10 Barley EST endosperm libra... 228 3e-058
gb|CV056807.1|CV056807 BNEL20g8 Barley EST endosperm librar... 228 3e-058
gb|CV057539.1|CV057539 BNEL29a12 Barley EST endosperm libra... 228 3e-058
gb|CV058145.1|CV058145 BNEL34g9 Barley EST endosperm librar... 228 3e-058
gb|CV058582.1|CV058582 BNEL39e8 Barley EST endosperm librar... 228 3e-058
gb|CV059910.1|CV059910 BNEL52c4 Barley EST endosperm librar... 228 3e-058
gb|CV060168.1|CV060168 BNEL55b7 Barley EST endosperm librar... 228 3e-058
gb|BQ664765.1|BQ664765 HV04M15u HV Hordeum vulgare subsp. v... 226 1e-057
gb|CB874394.1|CB874394 HX05C06w HX Hordeum vulgare subsp. v... 226 1e-057
gb|CV058463.1|CV058463 BNEL38c8 Barley EST endosperm librar... 226 1e-057
gb|BQ472232.1|BQ472232 HV04M15r HV Hordeum vulgare subsp. v... 224 4e-057
gb|BU979767.1|BU979767 HA17D16r HA Hordeum vulgare subsp. v... 224 4e-057
gb|CA017379.1|CA017379 HV05A14r HV Hordeum vulgare subsp. v... 222 2e-056
gb|AJ461834.1|AJ461834 AJ461834 S00002 Hordeum vulgare subs... 218 2e-055
gb|BQ763130.1|BQ763130 EBro02_SQ007_F11_R root, 3 week, hyd... 218 2e-055
gb|CV059713.1|CV059713 BNEL50b3 Barley EST endosperm librar... 218 2e-055
gb|CB876592.1|CB876592 HX11M07w HX Hordeum vulgare subsp. v... 216 1e-054
gb|BJ449495.1|BJ449495 BJ449495 K. Sato unpublished cDNA li... 214 4e-054
gb|BQ661641.1|BQ661641 HM04H19u HM Hordeum vulgare subsp. v... 214 4e-054
gb|CV058711.1|CV058711 BNEL40a3 Barley EST endosperm librar... 214 4e-054
gb|CV061700.1|CV061700 BNEL70h5 Barley EST endosperm librar... 212 1e-053
gb|CV059589.1|CV059589 BNEL49g5 Barley EST endosperm librar... 210 6e-053
gb|BQ665894.1|BQ665894 HZ01H18u HZ Hordeum vulgare subsp. v... 200 6e-050
gb|BG299572.1|BG299572 HVSMEa0020N06f Hordeum vulgare seedl... 192 1e-047
gb|AJ461833.1|AJ461833 AJ461833 S00002 Hordeum vulgare subs... 190 5e-047
gb|CA003637.1|CA003637 HS15B16r HS Hordeum vulgare subsp. v... 184 3e-045
gb|BU971081.1|BU971081 HB16I21r BC Hordeum vulgare subsp. v... 182 1e-044
gb|BQ756195.1|BQ756195 EBem05_SQ004_B21_R embryo, 14 DPA, n... 174 3e-042
gb|BF256931.2|BF256931 HVSMEf0011G13f Hordeum vulgare seedl... 172 1e-041
gb|AV936755.1|AV936755 AV936755 K. Sato unpublished cDNA li... 168 2e-040
gb|CV058133.1|CV058133 BNEL34f8 Barley EST endosperm librar... 168 2e-040
gb|BG417915.1|BG417915 HVSMEk0019P10f Hordeum vulgare testa... 165 3e-039
gb|BU987960.1|BU987960 HF16E10r HF Hordeum vulgare subsp. v... 165 3e-039
gb|CA020678.1|CA020678 HZ37C14r HZ Hordeum vulgare subsp. v... 165 3e-039
gb|CA028864.1|CA028864 HZ63H13r HZ Hordeum vulgare subsp. v... 165 3e-039
gb|CA017068.1|CA017068 HV05A14u HV Hordeum vulgare subsp. v... 161 5e-038
gb|BF261159.1|BF261159 HVSMEf0023O15f Hordeum vulgare seedl... 151 5e-035
gb|BJ464279.1|BJ464279 BJ464279 K. Sato unpublished cDNA li... 143 1e-032
gb|AJ434156.1|AJ434156 AJ434156 S00002 Hordeum vulgare subs... 141 5e-032
gb|BQ468214.1|BQ468214 HP01G19T HP Hordeum vulgare subsp. v... 121 4e-026
gb|AV919254.1|AV919254 AV919254 K. Sato unpublished cDNA li... 111 4e-023
gb|BM441407.1|BM441407 EBma05_SQ004_C21_R maternal, 12 DPA,... 111 4e-023
gb|BU985431.1|BU985431 HF07C23r HF Hordeum vulgare subsp. v... 96 2e-018
gb|CK124165.1|CK124165 BES1824107e11 BES1824 Hordeum vulgar... 94 1e-017
gb|BQ757628.1|BQ757628 EBem10_SQ004_L15_R embryo, 2 Day ger... 84 9e-015
gb|BQ661820.1|BQ661820 HP01G19w HP Hordeum vulgare subsp. v... 68 5e-010
gb|AV914216.1|AV914216 AV914216 K. Sato unpublished cDNA li... 52 3e-005
gb|BU980351.1|BU980351 HA20H07r HA Hordeum vulgare subsp. v... 52 3e-005
gb|BQ761390.1|BQ761390 EBro06_SQ001_K04_R root, 3 week, dro... 48 5e-004
gb|CA026081.1|CA026081 HZ54D02r HZ Hordeum vulgare subsp. v... 48 5e-004
gb|BQ757554.1|BQ757554 EBem10_SQ004_H21_R embryo, 2 Day ger... 42 0.031
gb|BQ757560.1|BQ757560 EBem10_SQ004_I07_R embryo, 2 Day ger... 42 0.031
gb|BQ765744.1|BQ765744 EBro03_SQ008_E04_R root, 3 week, wat... 42 0.031
gb|BJ447244.1|BJ447244 BJ447244 K. Sato unpublished cDNA li... 40 0.12
gb|BJ454745.1|BJ454745 BJ454745 K. Sato unpublished cDNA li... 40 0.12
>gb|AL506939.1|AL506939 AL506939 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04L02T 5',
mRNA sequence
Length = 700
Score = 620 bits (313), Expect = e-176
Identities = 504/567 (88%), Gaps = 3/567 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 67 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 126
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 127 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 186
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 187 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 246
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 247 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 306
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 307 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 366
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 367 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 426
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 427 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 486
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 487 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 546
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 547 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 606
Query: 623 aggaacagccgtggattcaaggtttaa 649
|||||||||||||| ||||||||||||
Sbjct: 607 aggaacagccgtggcttcaaggtttaa 633
>gb|BE602150.2|BE602150 HVSMEh0102M04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102M04f, mRNA sequence
Length = 726
Score = 620 bits (313), Expect = e-176
Identities = 504/567 (88%), Gaps = 3/567 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 66 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 125
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 126 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 185
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 186 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 245
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 246 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 305
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 306 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 365
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 366 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 425
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 426 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 485
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 486 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 545
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 546 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 605
Query: 623 aggaacagccgtggattcaaggtttaa 649
|||||||||||||| ||||||||||||
Sbjct: 606 aggaacagccgtggcttcaaggtttaa 632
>gb|AV936748.1|AV936748 AV936748 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m06 3', mRNA sequence
Length = 741
Score = 620 bits (313), Expect = e-176
Identities = 504/567 (88%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 732 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 673
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 672 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 613
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 612 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 553
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 552 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 493
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 492 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 433
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 432 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 373
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 372 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 313
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 312 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 253
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 252 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 193
Query: 623 aggaacagccgtggattcaaggtttaa 649
|||||||||||||| ||||||||||||
Sbjct: 192 aggaacagccgtggcttcaaggtttaa 166
>gb|BQ764842.1|BQ764842 EBca01_SQ005_F02_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_F02 5', mRNA sequence
Length = 698
Score = 620 bits (313), Expect = e-176
Identities = 504/567 (88%), Gaps = 3/567 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 77 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 136
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 137 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 196
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 197 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 256
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 257 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 316
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 317 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 376
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 377 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 436
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 437 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 496
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 497 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 556
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 557 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 616
Query: 623 aggaacagccgtggattcaaggtttaa 649
|||||||||||||| ||||||||||||
Sbjct: 617 aggaacagccgtggcttcaaggtttaa 643
>gb|CA013022.1|CA013022 HT07C16r HT Hordeum vulgare subsp. vulgare cDNA clone HT07C16
5-PRIME, mRNA sequence
Length = 628
Score = 617 bits (311), Expect = e-175
Identities = 502/565 (88%), Gaps = 3/565 (0%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
|||||||||||||||||| || |||||||| |||| |||||||||| |||||||||||
Sbjct: 1 gggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaagtc 60
Query: 148 tgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaa 207
|||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 61 cgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggaccaa 120
Query: 208 gagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccacc 267
|||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| || ||
Sbjct: 121 gagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccgcc 180
Query: 268 aatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgctgt 324
||||||||||||| || ||| || ||| | |||| |||||||||||||||||||
Sbjct: 181 gctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgctgt 240
Query: 325 cattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttac 384
||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||||
Sbjct: 241 ggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggttac 300
Query: 385 tgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcct 444
|| ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 301 cgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgcct 360
Query: 445 cacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagggg 504
||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||||
Sbjct: 361 cacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagggg 420
Query: 505 ccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacag 564
|||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||
Sbjct: 421 acccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcacag 480
Query: 565 ccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggag 624
|||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 481 ccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtaggag 540
Query: 625 gaacagccgtggattcaaggtttaa 649
|||||||||||| ||||||||||||
Sbjct: 541 gaacagccgtggcttcaaggtttaa 565
>gb|AV919247.1|AV919247 AV919247 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c24 3', mRNA sequence
Length = 698
Score = 615 bits (310), Expect = e-174
Identities = 503/567 (88%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || || ||||| |||| |||||||||| |||||||||
Sbjct: 681 atgggtatcgacctcgtcgctggcggnaggaacaagaggaccaagcgcgtcgcgcccaag 622
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 621 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 562
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 561 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 502
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 501 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 442
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 441 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 382
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 381 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 322
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 321 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 262
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 261 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 202
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 201 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 142
Query: 623 aggaacagccgtggattcaaggtttaa 649
|||||||||||||| ||||||||||||
Sbjct: 141 aggaacagccgtggcttcaaggtttaa 115
>gb|CK122291.1|CK122291 BES1824102m01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M012 5-PRIME, mRNA sequence
Length = 774
Score = 615 bits (310), Expect = e-174
Identities = 501/564 (88%), Gaps = 3/564 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 74 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 133
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 134 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 193
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 194 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 253
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 254 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 313
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 314 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 373
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 374 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 433
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 434 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 493
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 494 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 553
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 554 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 613
Query: 623 aggaacagccgtggattcaaggtt 646
|||||||||||||| |||||||||
Sbjct: 614 aggaacagccgtggcttcaaggtt 637
>gb|AV914207.1|AV914207 AV914207 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c24 5', mRNA sequence
Length = 661
Score = 607 bits (306), Expect = e-172
Identities = 497/560 (88%), Gaps = 3/560 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 102 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 161
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 162 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 221
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 222 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 281
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 282 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 341
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 342 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 401
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 402 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 461
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 462 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 521
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 522 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 581
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 582 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 641
Query: 623 aggaacagccgtggattcaa 642
|||||||||||||| |||||
Sbjct: 642 aggaacagccgtggcttcaa 661
>gb|BJ454353.1|BJ454353 BJ454353 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24b19 5', mRNA sequence
Length = 633
Score = 605 bits (305), Expect = e-171
Identities = 496/559 (88%), Gaps = 3/559 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 75 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 134
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 135 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 194
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 195 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 254
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 255 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 314
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 315 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 374
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 375 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 434
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 435 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 494
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 495 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 554
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 555 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 614
Query: 623 aggaacagccgtggattca 641
|||||||||||||| ||||
Sbjct: 615 aggaacagccgtggcttca 633
>gb|CA013879.1|CA013879 HT09M01r HT Hordeum vulgare subsp. vulgare cDNA clone HT09M01
5-PRIME, mRNA sequence
Length = 639
Score = 603 bits (304), Expect = e-171
Identities = 492/554 (88%), Gaps = 3/554 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 83 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 142
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 143 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 202
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 203 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 262
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 263 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 322
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 323 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 382
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 383 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 442
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 443 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 502
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 503 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 562
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 563 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 622
Query: 623 aggaacagccgtgg 636
||||||||||||||
Sbjct: 623 aggaacagccgtgg 636
>gb|CA031123.1|CA031123 HX09B09r HX Hordeum vulgare subsp. vulgare cDNA clone HX09B09
5-PRIME, mRNA sequence
Length = 634
Score = 603 bits (304), Expect = e-171
Identities = 492/554 (88%), Gaps = 3/554 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 77 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 136
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 137 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 196
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 197 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 256
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 257 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 316
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 317 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 376
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 377 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 436
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 437 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 496
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 497 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 556
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 557 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 616
Query: 623 aggaacagccgtgg 636
||||||||||||||
Sbjct: 617 aggaacagccgtgg 630
>gb|CA031784.1|CA031784 HX11C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX11C02
5-PRIME, mRNA sequence
Length = 640
Score = 603 bits (304), Expect = e-171
Identities = 492/554 (88%), Gaps = 3/554 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 84 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 143
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 144 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 203
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 204 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 263
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 264 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 323
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 324 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 383
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 384 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 443
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 444 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 503
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 504 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 563
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 564 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 623
Query: 623 aggaacagccgtgg 636
||||||||||||||
Sbjct: 624 aggaacagccgtgg 637
>gb|CV057277.1|CV057277 BNEL26a2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL26a2 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 609
Score = 597 bits (301), Expect = e-169
Identities = 489/551 (88%), Gaps = 3/551 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 58 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 117
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 118 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 177
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 178 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 237
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 238 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 297
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 298 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 357
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 358 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 417
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 418 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 477
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 478 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 537
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 538 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 597
Query: 623 aggaacagccg 633
|||||||||||
Sbjct: 598 aggaacagccg 608
>gb|BG343542.1|BG343542 HVSMEg0006F12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006F12f, mRNA sequence
Length = 995
Score = 589 bits (297), Expect = e-167
Identities = 495/559 (88%), Gaps = 4/559 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 74 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 133
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 134 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 193
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 194 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 253
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 254 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 313
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 314 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 373
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 374 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 433
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 434 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 493
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 494 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 553
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| |||||||||||| |||| |||||||| |||||||||||||| |||
Sbjct: 554 agccacaccaagccctatgtgcgctcc-agggtaggaagtttgagaaggctcgtggtagg 612
Query: 623 aggaacagccgtggattca 641
|||||||||||||| ||||
Sbjct: 613 aggaacagccgtggcttca 631
>gb|AV934278.1|AV934278 AV934278 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11m09 5', mRNA sequence
Length = 617
Score = 589 bits (297), Expect = e-167
Identities = 485/547 (88%), Gaps = 3/547 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 71 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 130
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 131 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 190
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 191 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 250
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 251 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 310
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 311 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 370
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 371 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 430
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 431 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 490
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 491 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 550
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 551 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 610
Query: 623 aggaaca 629
|||||||
Sbjct: 611 aggaaca 617
>gb|CV059672.1|CV059672 BNEL4F8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL4F8 5' similar to cytoplasmic ribosomal
protein L18, mRNA sequence
Length = 635
Score = 589 bits (297), Expect = e-167
Identities = 485/547 (88%), Gaps = 3/547 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 87 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 146
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 147 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 206
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 207 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 266
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 267 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 326
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 327 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 386
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 387 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 446
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 447 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 506
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 507 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 566
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 567 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 626
Query: 623 aggaaca 629
|||||||
Sbjct: 627 aggaaca 633
>gb|BU978921.1|BU978921 HA14K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA14K10
5-PRIME, mRNA sequence
Length = 629
Score = 587 bits (296), Expect = e-166
Identities = 484/546 (88%), Gaps = 3/546 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 84 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 143
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 144 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 203
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 204 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 263
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 264 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 323
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 324 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 383
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 384 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 443
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 444 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 503
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 504 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 563
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 564 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 623
Query: 623 aggaac 628
||||||
Sbjct: 624 aggaac 629
>gb|CV061335.1|CV061335 BNEL67f4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67f4 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 633
Score = 583 bits (294), Expect = e-165
Identities = 484/547 (88%), Gaps = 3/547 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 87 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 146
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 147 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 206
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 207 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 266
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 267 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 326
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 327 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 386
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 387 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 446
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 447 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 506
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||
Sbjct: 507 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggcttctggtgtgccgcac 566
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 567 agccacaccaagccctatgtgcgctccaagggtaggaagttngagaaggctcgtggtagg 626
Query: 623 aggaaca 629
|||||||
Sbjct: 627 aggaaca 633
>gb|BU978046.1|BU978046 HA12H18r HA Hordeum vulgare subsp. vulgare cDNA clone HA12H18
5-PRIME, mRNA sequence
Length = 615
Score = 581 bits (293), Expect = e-164
Identities = 481/543 (88%), Gaps = 3/543 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 73 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 132
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 133 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 192
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 193 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 252
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 253 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 312
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 313 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 372
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 373 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 432
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 433 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 492
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 493 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 552
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 553 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 612
Query: 623 agg 625
|||
Sbjct: 613 agg 615
>gb|CK125500.1|CK125500 BES1824108m14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M148 5-PRIME, mRNA sequence
Length = 692
Score = 581 bits (293), Expect = e-164
Identities = 500/568 (88%), Gaps = 4/568 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 74 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 133
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 134 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 193
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 194 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 253
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 254 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 313
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 314 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 373
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 374 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 433
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 434 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 493
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| | ||||||||| |||||||||||||| |||||||||
Sbjct: 494 ggacccaagaatgcccgtgaggcggggaggcacttcggcaaggctcctggtgtgccgcac 553
Query: 563 agccacaccaagccgtatgtgcgctccaagggaagg-aagttcgagaaggctcgtggcag 621
|||||||||||||| ||||||||||||||||| ||| ||||| ||||| |||||||| ||
Sbjct: 554 agccacaccaagccctatgtgcgctccaagggtaggaaagtttgagaangctcgtggtag 613
Query: 622 gaggaacagccgtggattcaaggtttaa 649
|| |||||||||||| ||| ||||||||
Sbjct: 614 gangaacagccgtggcttcnaggtttaa 641
>gb|AV933195.1|AV933195 AV933195 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m06 5', mRNA sequence
Length = 612
Score = 579 bits (292), Expect = e-164
Identities = 480/542 (88%), Gaps = 3/542 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 71 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 130
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 131 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 190
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 191 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 250
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 251 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 310
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 311 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 370
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 371 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 430
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 431 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 490
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 491 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 550
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 551 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtagg 610
Query: 623 ag 624
||
Sbjct: 611 ag 612
>gb|BJ471147.1|BJ471147 BJ471147 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17a03 5', mRNA sequence
Length = 608
Score = 575 bits (290), Expect = e-163
Identities = 475/536 (88%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 71 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 130
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 131 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 190
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 191 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 250
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 251 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 310
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 311 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 370
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 371 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 430
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 431 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 490
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 491 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 550
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 551 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtgg 606
>gb|BQ458700.1|BQ458700 HA04H18r HA Hordeum vulgare subsp. vulgare cDNA clone HA04H18
5-PRIME, mRNA sequence
Length = 616
Score = 575 bits (290), Expect = e-163
Identities = 475/536 (88%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 77 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 136
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 137 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 196
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 197 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 256
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 257 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 316
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 317 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 376
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 377 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 436
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 437 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 496
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 497 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 556
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 557 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtgg 612
>gb|BQ459597.1|BQ459597 HA08K13r HA Hordeum vulgare subsp. vulgare cDNA clone HA08K13
5-PRIME, mRNA sequence
Length = 550
Score = 575 bits (290), Expect = e-163
Identities = 478/540 (88%), Gaps = 3/540 (0%)
Strand = Plus / Plus
Query: 92 atcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtctgac 151
|||||||||||||| || |||||||| |||| |||||||||| ||||||||||| |||
Sbjct: 11 atcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaagtccgac 70
Query: 152 gatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagc 211
||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 71 gatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggaccaagagc 130
Query: 212 aatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccaccaatc 271
|| |||||||| ||||| ||||||||||| |||||||| || |||||||| || || ||
Sbjct: 131 aagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccgccgctc 190
Query: 272 tccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgctgtcatt 328
||||||||||| || ||| || ||| | |||| ||||||||||||||||||| ||
Sbjct: 191 tccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgctgtggtt 250
Query: 329 gttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttactgcc 388
||||||||| |||||||||||| ||||||| ||| | ||||||||||||||||| ||
Sbjct: 251 gttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggttaccgct 310
Query: 389 ctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctcaca 448
||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct: 311 ctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgcctcact 370
Query: 449 tttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggcccc 508
||||||||||||||||| ||||||||| ||| ||||||||| |||| |||||||| |||
Sbjct: 371 tttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgaggggaccc 430
Query: 509 aagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccac 568
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 431 aagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcacagccac 490
Query: 569 accaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaac 628
|||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 491 accaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtaggaggaac 550
>gb|BM370156.2|BM370156 EBro08_SQ003_C16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_C16 5', mRNA sequence
Length = 607
Score = 575 bits (290), Expect = e-163
Identities = 475/536 (88%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 71 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 130
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 131 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 190
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 191 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 250
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 251 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 310
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 311 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 370
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 371 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 430
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 431 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 490
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 491 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 550
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 551 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtgg 606
>gb|BU982839.1|BU982839 HA27M06r HA Hordeum vulgare subsp. vulgare cDNA clone HA27M06
5-PRIME, mRNA sequence
Length = 619
Score = 575 bits (290), Expect = e-163
Identities = 475/536 (88%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 80 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 139
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 140 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 199
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 200 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 259
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 260 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 319
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 320 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 379
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 380 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 439
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 440 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 499
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 500 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 559
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 560 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtgg 615
>gb|BU989855.1|BU989855 HF22O04r HF Hordeum vulgare subsp. vulgare cDNA clone HF22O04
5-PRIME, mRNA sequence
Length = 623
Score = 575 bits (290), Expect = e-163
Identities = 475/536 (88%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 87 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 146
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 147 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 206
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 207 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 266
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 267 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 326
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 327 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 386
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 387 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 446
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 447 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 506
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 507 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 566
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 567 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtgg 622
>gb|CA019512.1|CA019512 HV12D11r HV Hordeum vulgare subsp. vulgare cDNA clone HV12D11
5-PRIME, mRNA sequence
Length = 610
Score = 575 bits (290), Expect = e-163
Identities = 475/536 (88%), Gaps = 3/536 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 74 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 133
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 134 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 193
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 194 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 253
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 254 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 313
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 314 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 373
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 374 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 433
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 434 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 493
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 494 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 553
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 554 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggctcgtgg 609
>gb|CK125351.1|CK125351 BES1824107m06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M067 5-PRIME, mRNA sequence
Length = 736
Score = 567 bits (286), Expect = e-160
Identities = 472/534 (88%), Gaps = 3/534 (0%)
Strand = Plus / Plus
Query: 119 aagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaag 178
|||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 108 aagaggaccaagcgcgtcgcgcccaagtccgacgatgtgtacctcaagctcctcgtcaag 167
Query: 179 ctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagagg 238
|||||||||||| ||| ||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 168 ctctaccgtttcctggngaggaggaccaagagcaagttcaacgccgtcatcctcaagagg 227
Query: 239 cttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttatg 298
|| |||||||| || |||||||| || || ||||||||||||| || ||| || |||
Sbjct: 228 ctcttcatgagcaagaccaaccgcccgccgctctccatgcgccgtctctccaacttcatg 287
Query: 299 gaaggaa---aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaagg 355
| |||| ||||||||||||||||||| ||||||||||| |||||||||||| ||
Sbjct: 288 aagggaaaggaggagaagaacattgctgtggttgttggcacaatcacagatgacatgcgg 347
Query: 356 atccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggcc 415
||||| ||| | ||||||||||||||||| | ||||||||||| |||||||| |||||
Sbjct: 348 atccaagagatcccagcaatgaaggttaccgntctgaggttcacagagacagcgagggca 407
Query: 416 aggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcca 475
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 408 aggattgtcaatgctggtggggagtgcctcacttttgaccagcttgctctccgtgctcca 467
Query: 476 cttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcac 535
||| ||||||||| |||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 468 actggggagaacacgatcctgttgaggggacccaagaatgcccgtgaggcggtgaggcac 527
Query: 536 tttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaaggga 595
|| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 528 ttcggcaaggctcctggtgtgccgcacagccacaccaagccctatgtgcgctccaagggt 587
Query: 596 aggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||||||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 588 aggaagtttgagaaggctcgtggtaggaggaacagccgtggcttcaaggtttaa 641
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgc 105
||||||||||||||||||||
Sbjct: 74 atgggtatcgacctcgtcgc 93
>gb|BG343847.1|BG343847 HVSMEg0006O16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006O16f, mRNA sequence
Length = 987
Score = 565 bits (285), Expect = e-160
Identities = 488/555 (87%), Gaps = 4/555 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 77 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 136
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 137 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 196
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 197 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 256
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 257 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 316
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 317 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 376
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 377 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 436
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 437 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 496
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 497 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 556
Query: 563 agccacaccaagccgtatgtgcgctccaaggg-aaggaagttcgagaaggctcgtggcag 621
|||||||||||||| ||||||||||||||||| | |||| | ||||| |||||||| |
Sbjct: 557 agccacaccaagccctatgtgcgctccaagggtanngaagnttgagaaagctcgtggtan 616
Query: 622 gaggaacagccgtgg 636
|||||||||||||||
Sbjct: 617 gaggaacagccgtgg 631
>gb|BU976861.1|BU976861 HA10H03r HA Hordeum vulgare subsp. vulgare cDNA clone HA10H03
5-PRIME, mRNA sequence
Length = 607
Score = 565 bits (285), Expect = e-160
Identities = 470/531 (88%), Gaps = 3/531 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 77 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 136
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 137 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 196
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 197 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 256
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 257 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 316
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 317 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 376
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 377 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 436
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 437 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 496
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 497 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 556
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 557 agccacaccaagccctatgtgcgctccaagggtaggaagtttgagaaggct 607
>gb|CA018350.1|CA018350 HV08F24r HV Hordeum vulgare subsp. vulgare cDNA clone HV08F24
5-PRIME, mRNA sequence
Length = 614
Score = 563 bits (284), Expect = e-159
Identities = 475/537 (88%), Gaps = 4/537 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 77 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 136
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 137 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 196
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 197 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 256
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 257 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 316
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 317 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 376
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 377 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 436
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 437 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 496
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 497 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 556
Query: 563 agccacaccaagccgtatgtgcgctccaaggg-aaggaagttcgagaaggctcgtgg 618
|||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||||
Sbjct: 557 agccacaccaagccctatgtgcgctccaagggtanggaagtttgagaaggctcgtgg 613
>gb|BQ471559.1|BQ471559 HV02M17r HV Hordeum vulgare subsp. vulgare cDNA clone HV02M17
5-PRIME, mRNA sequence
Length = 567
Score = 553 bits (279), Expect = e-156
Identities = 461/521 (88%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 45 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 104
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 105 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 164
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 165 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 224
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 225 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 284
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 285 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 344
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 345 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 404
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 405 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 464
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 465 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 524
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagtt 603
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 525 agccacaccaagccctatgtgcgctccaagggtaggaagtt 565
>gb|BI778124.2|BI778124 EBro07_SQ002_E18_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_E18 5', mRNA sequence
Length = 583
Score = 553 bits (279), Expect = e-156
Identities = 461/521 (88%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 59 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 118
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 119 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 178
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 179 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 238
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 239 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 298
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 299 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 358
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 359 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 418
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 419 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 478
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 479 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 538
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagtt 603
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 539 agccacaccaagccctatgtgcgctccaagggtaggaagtt 579
>gb|BI778592.2|BI778592 EBro07_SQ003_L22_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_L22 5', mRNA sequence
Length = 597
Score = 553 bits (279), Expect = e-156
Identities = 461/521 (88%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 74 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 133
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 134 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 193
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 194 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 253
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 254 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 313
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 314 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 373
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 374 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 433
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 434 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 493
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 494 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 553
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagtt 603
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 554 agccacaccaagccctatgtgcgctccaagggtaggaagtt 594
>gb|BU976772.1|BU976772 HA10E16r HA Hordeum vulgare subsp. vulgare cDNA clone HA10E16
5-PRIME, mRNA sequence
Length = 606
Score = 553 bits (279), Expect = e-156
Identities = 461/521 (88%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 84 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 143
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 144 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 203
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 204 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 263
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 264 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 323
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 324 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 383
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 384 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 443
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 444 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 503
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 504 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 563
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagtt 603
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 564 agccacaccaagccctatgtgcgctccaagggtaggaagtt 604
>gb|BU978459.1|BU978459 HA13E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA13E18
5-PRIME, mRNA sequence
Length = 599
Score = 553 bits (279), Expect = e-156
Identities = 461/521 (88%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 78 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 137
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 138 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 197
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 198 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 257
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 258 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 317
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 318 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 377
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 378 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 437
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 438 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 497
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 498 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 557
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagtt 603
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 558 agccacaccaagccctatgtgcgctccaagggtaggaagtt 598
>gb|BU978754.1|BU978754 HA14C20r HA Hordeum vulgare subsp. vulgare cDNA clone HA14C20
5-PRIME, mRNA sequence
Length = 595
Score = 553 bits (279), Expect = e-156
Identities = 461/521 (88%), Gaps = 3/521 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 73 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 132
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 133 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 192
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 193 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 252
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 253 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 312
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 313 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 372
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 373 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 432
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 433 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 492
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 493 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 552
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagtt 603
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 553 agccacaccaagccctatgtgcgctccaagggtaggaagtt 593
>gb|CV054364.1|CV054364 BNEL109f7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL109f7 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 603
Score = 551 bits (278), Expect = e-155
Identities = 469/532 (88%), Gaps = 3/532 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 72 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 131
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 132 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 191
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 192 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 251
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 252 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 311
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 312 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 371
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 372 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 431
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 432 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 491
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 492 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 551
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctc 614
|||||||||||||| ||||||||||||||||| ||||| | ||||||||||
Sbjct: 552 agccacaccaagccctatgtgcgctccaagggtaggaaagttgagaaggctc 603
>gb|BQ135343.1|BQ135343 LP10074 Lemma/palea-enriched cDNA library from elongation stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 1-74
similar to Oryza sativa 60S (cytoplasmic) ribosomal
protein L18, PID: 14595709, mRNA sequence
Length = 576
Score = 549 bits (277), Expect = e-155
Identities = 441/495 (89%), Gaps = 3/495 (0%)
Strand = Plus / Minus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||
Sbjct: 575 tacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggaccaagagcaagttc 516
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccaccaatctccatg 277
||||| ||||| ||||||||||| |||||||| || |||||||| || || ||||||||
Sbjct: 515 aacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccgccgctctccatg 456
Query: 278 cgccgccttgtcaagtttatggaaggaa---aggagaagaacattgctgtcattgttggc 334
||||| || ||| || ||| | |||| ||||||||||||||||||| ||||||||
Sbjct: 455 cgccgtctctccaacttcatgaagggaaaggaggagaagaacattgctgtggttgttggc 396
Query: 335 acagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttactgccctgagg 394
||| |||||||||||| ||||||| ||| | ||||||||||||||||| || ||||||
Sbjct: 395 acaatcacagatgacatgcggatccaagagatcccagcaatgaaggttaccgctctgagg 336
Query: 395 ttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctcacatttgac 454
||||| |||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 335 ttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgcctcacttttgac 276
Query: 455 cagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaat 514
||||||||||| ||||||||| ||| ||||||||| |||| |||||||| |||||||||
Sbjct: 275 cagcttgctctccgtgctccaactggggagaacacgatcctgttgaggggacccaagaat 216
Query: 515 gcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaag 574
||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 215 gcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcacagccacaccaag 156
Query: 575 ccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgt 634
|| ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct: 155 ccctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtaggaggaacagccgt 96
Query: 635 ggattcaaggtttaa 649
|| ||||||||||||
Sbjct: 95 ggcttcaaggtttaa 81
>gb|BQ768758.1|BQ768758 EBro08_SQ012_H18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_H18 5', mRNA sequence
Length = 603
Score = 549 bits (277), Expect = e-155
Identities = 459/519 (88%), Gaps = 3/519 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 85 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 144
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 145 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 204
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 205 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 264
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 265 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 324
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 325 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 384
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 385 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 444
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 445 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 504
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 505 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 564
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaag 601
|||||||||||||| ||||||||||||||||| ||||||
Sbjct: 565 agccacaccaagccctatgtgcgctccaagggtaggaag 603
>gb|CV063934.1|CV063934 BNEL94h10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h10 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 659
Score = 545 bits (275), Expect = e-154
Identities = 439/493 (89%), Gaps = 3/493 (0%)
Strand = Plus / Plus
Query: 160 cctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttcaa 219
||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 8 cctcaagctcctcgtcaagctctaccgtttcctggtgaggaggaccaagagcaagttcaa 67
Query: 220 cgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccaccaatctccatgcg 279
||| ||||| ||||||||||| |||||||| || |||||||| || || ||||||||||
Sbjct: 68 cgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccgccgctctccatgcg 127
Query: 280 ccgccttgtcaagtttatggaaggaa---aggagaagaacattgctgtcattgttggcac 336
||| || ||| || ||| | |||| ||||||||||||||||||| ||||||||||
Sbjct: 128 ccgtctctccaacttcatgaagggaaaggaggagaagaacattgctgtggttgttggcac 187
Query: 337 agtcacagatgacaaaaggatccaggaggttccagcaatgaaggttactgccctgaggtt 396
| |||||||||||| ||||||| ||| | ||||||||||||||||| || ||||||||
Sbjct: 188 aatcacagatgacatgcggatccaagagatcccagcaatgaaggttaccgctctgaggtt 247
Query: 397 cacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctcacatttgacca 456
||| |||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 248 cacagagacagcgagggcaaggattgtcaatgctggtggggagtgcctcacttttgacca 307
Query: 457 gcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatgc 516
||||||||| ||||||||| ||| ||||||||| |||| |||||||| |||||||||||
Sbjct: 308 gcttgctctccgtgctccaactggggagaacacgatcctgttgaggggacccaagaatgc 367
Query: 517 ccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaagcc 576
||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 368 ccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcacagccacaccaagcc 427
Query: 577 gtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgtgg 636
||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct: 428 ctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtaggaggaacagccgtgg 487
Query: 637 attcaaggtttaa 649
||||||||||||
Sbjct: 488 cttcaaggtttaa 500
>gb|BI778501.2|BI778501 EBro07_SQ003_H16_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_H16 5', mRNA sequence
Length = 586
Score = 543 bits (274), Expect = e-153
Identities = 453/512 (88%), Gaps = 3/512 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 74 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 133
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 134 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 193
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 194 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 253
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 254 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 313
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 314 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 373
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 374 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 433
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 434 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 493
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 494 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 553
Query: 563 agccacaccaagccgtatgtgcgctccaaggg 594
|||||||||||||| |||||||||||||||||
Sbjct: 554 agccacaccaagccctatgtgcgctccaaggg 585
>gb|BQ767131.1|BQ767131 EBro08_SQ008_F02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_F02 5', mRNA sequence
Length = 581
Score = 543 bits (274), Expect = e-153
Identities = 453/512 (88%), Gaps = 3/512 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 67 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 126
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 127 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 186
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 187 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 246
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 247 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 306
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 307 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 366
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 367 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 426
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 427 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 486
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 487 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 546
Query: 563 agccacaccaagccgtatgtgcgctccaaggg 594
|||||||||||||| |||||||||||||||||
Sbjct: 547 agccacaccaagccctatgtgcgctccaaggg 578
>gb|BU979485.1|BU979485 HA16F02r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F02
5-PRIME, mRNA sequence
Length = 601
Score = 543 bits (274), Expect = e-153
Identities = 453/512 (88%), Gaps = 3/512 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 86 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 145
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 146 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 205
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 206 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 265
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 266 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 325
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 326 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 385
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 386 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 445
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 446 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 505
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 506 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 565
Query: 563 agccacaccaagccgtatgtgcgctccaaggg 594
|||||||||||||| |||||||||||||||||
Sbjct: 566 agccacaccaagccctatgtgcgctccaaggg 597
>gb|AV933307.1|AV933307 AV933307 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6e06 5', mRNA sequence
Length = 579
Score = 537 bits (271), Expect = e-151
Identities = 450/509 (88%), Gaps = 3/509 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 71 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 130
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 131 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 190
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 191 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 250
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 251 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 310
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 311 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 370
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 371 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 430
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 431 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 490
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 491 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 550
Query: 563 agccacaccaagccgtatgtgcgctccaa 591
|||||||||||||| ||||||||||||||
Sbjct: 551 agccacaccaagccctatgtgcgctccaa 579
>gb|AV936754.1|AV936754 AV936754 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m17 3', mRNA sequence
Length = 636
Score = 535 bits (270), Expect = e-151
Identities = 438/494 (88%), Gaps = 3/494 (0%)
Strand = Plus / Minus
Query: 159 acctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttca 218
|||||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||
Sbjct: 636 acctcaagctcctcgtcaagctctaccgtttcctggtgaggaggaccaagagcnagttca 577
Query: 219 acgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccaccaatctccatgc 278
|||| ||||| ||||||||||| |||||||| || |||||||| || || |||||||||
Sbjct: 576 acgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccgccgctctccatgc 517
Query: 279 gccgccttgtcaagtttatggaaggaa---aggagaagaacattgctgtcattgttggca 335
|||| || ||| || ||| | |||| ||||||||||||||||||| |||||||||
Sbjct: 516 gccgtctctccaacttcatgaagggaaaggaggagaagaacattgctgtggttgttggca 457
Query: 336 cagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttactgccctgaggt 395
|| |||||||||||| ||||||| ||| | ||||||||||||||||| || |||||||
Sbjct: 456 caatcacagatgacatgcggatccaagagatcccagcaatgaaggttaccgctctgaggt 397
Query: 396 tcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctcacatttgacc 455
|||| |||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 396 tcacagagacagcgagggcaaggattgtcaatgctggtggggagtgcctcacttttgacc 337
Query: 456 agcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatg 515
|||||||||| ||||||||| ||| ||||||||| |||| |||||||| ||||||||||
Sbjct: 336 agcttgctctccgtgctccaactggggagaacacgatcctgttgaggggacccaagaatg 277
Query: 516 cccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaagc 575
|||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 276 cccgtgagncggtgaggcacttcggcaaggctcctggtgtgccgcacagccacaccaagc 217
Query: 576 cgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgtg 635
| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct: 216 cctatgtgcgctccaagggtaggaagtttgagaaggctcgtggtaggaggaacagccgtg 157
Query: 636 gattcaaggtttaa 649
| ||||||||||||
Sbjct: 156 gcttcaaggtttaa 143
>gb|CV062378.1|CV062378 BNEL79d12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79d12 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 677
Score = 535 bits (270), Expect = e-151
Identities = 449/508 (88%), Gaps = 3/508 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 76 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 135
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 136 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 195
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 196 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 255
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 256 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 315
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 316 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 375
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 376 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 435
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 436 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 495
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 496 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 555
Query: 563 agccacaccaagccgtatgtgcgctcca 590
|||||||||||||| |||||||||||||
Sbjct: 556 agccacaccaagccctatgtgcgctcca 583
>gb|BQ464242.1|BQ464242 HF01L18T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L18
5-PRIME, mRNA sequence
Length = 628
Score = 533 bits (269), Expect = e-150
Identities = 433/487 (88%), Gaps = 3/487 (0%)
Strand = Plus / Minus
Query: 166 gctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgt 225
||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| ||
Sbjct: 628 gctcctcgtcaagctctaccgtttcctggtgaggaggaccaagagcaagttcaacgccgt 569
Query: 226 cattctcaagaggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgcct 285
||| ||||||||||| |||||||| || |||||||| || || ||||||||||||| ||
Sbjct: 568 catcctcaagaggctcttcatgagcaagaccaaccgcccgccgctctccatgcgccgtct 509
Query: 286 tgtcaagtttatggaaggaa---aggagaagaacattgctgtcattgttggcacagtcac 342
||| || ||| | |||| ||||||||||||||||||| ||||||||||| ||||
Sbjct: 508 ctccaacttcatgaagggaaaggaggagaagaacattgctgtggttgttggcacaatcac 449
Query: 343 agatgacaaaaggatccaggaggttccagcaatgaaggttactgccctgaggttcacgga 402
|||||||| ||||||| ||| | ||||||||||||||||| || ||||||||||| ||
Sbjct: 448 agatgacatgcggatccaagagatcccagcaatgaaggttaccgctctgaggttcacaga 389
Query: 403 gacagcaagggccaggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgc 462
|||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 388 gacagcgagggcaaggattgtcaatgctggtggggagtgcctcacttttgaccagcttgc 329
Query: 463 tcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatgcccgtga 522
||| ||||||||| ||| ||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 328 tctccgtgctccaactggggagaacacgatcctgttgaggggacccaagaatgcccgtga 269
Query: 523 ggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaagccgtatgt 582
||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 268 ggcggtgaggcacttcggcaaggctcctggtgtgccgcacagccacaccaagccctatgt 209
Query: 583 gcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaa 642
|||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 208 gcgctccaagggtaggaagtttgagaaggctcgtggtaggaggaacagccgtggcttcaa 149
Query: 643 ggtttaa 649
|||||||
Sbjct: 148 ggtttaa 142
>gb|BU983328.1|BU983328 HA29F18r HA Hordeum vulgare subsp. vulgare cDNA clone HA29F18
5-PRIME, mRNA sequence
Length = 586
Score = 529 bits (267), Expect = e-149
Identities = 446/505 (88%), Gaps = 3/505 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
|||||||||||||||||||| || |||||||| |||| |||||||||| |||||||||
Sbjct: 82 atgggtatcgacctcgtcgctggcgggaggaacaagaggaccaagcgcgtcgcgcccaag 141
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 142 tccgacgatgtgtacctcaagctcctcgtcaagctctaccgtttcctggtgaggaggacc 201
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||||| |||||||| ||||| ||||||||||| |||||||| || |||||||| ||
Sbjct: 202 aagagcaagttcaacgccgtcatcctcaagaggctcttcatgagcaagaccaaccgcccg 261
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgct 322
|| ||||||||||||| || ||| || ||| | |||| |||||||||||||||||
Sbjct: 262 ccgctctccatgcgccgtctctccaacttcatgaagggaaaggaggagaagaacattgct 321
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| ||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 322 gtggttgttggcacaatcacagatgacatgcggatccaagagatcccagcaatgaaggtt 381
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
|| || ||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 382 accgctctgaggttcacagagacagcgagggcaaggattgtcaatgctggtggggagtgc 441
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| ||||||||||||||||| ||||||||| ||| ||||||||| |||| ||||||
Sbjct: 442 ctcacttttgaccagcttgctctccgtgctccaactggggagaacacgatcctgttgagg 501
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct: 502 ggacccaagaatgcccgtgaggcggtgaggcacttcggcaaggctcctggtgtgccgcac 561
Query: 563 agccacaccaagccgtatgtgcgct 587
|||||||||||||| ||||||||||
Sbjct: 562 agccacaccaagccctatgtgcgct 586
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 100,890
Number of Sequences: 312970
Number of extensions: 100890
Number of successful extensions: 29725
Number of sequences better than 0.5: 242
Number of HSP's better than 0.5 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29212
Number of HSP's gapped (non-prelim): 430
length of query: 905
length of database: 175,134,539
effective HSP length: 19
effective length of query: 886
effective length of database: 169,188,109
effective search space: 149900664574
effective search space used: 149900664574
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)