BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.405
(1589 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU978000.1|BU978000 HA12G12r HA Hordeum vulgare subsp. v... 303 9e-081
gb|CA007503.1|CA007503 HU08C17r HU Hordeum vulgare subsp. v... 291 4e-077
gb|AV925778.1|AV925778 AV925778 K. Sato unpublished cDNA li... 281 3e-074
gb|CA007721.1|CA007721 HU08M12r HU Hordeum vulgare subsp. v... 276 2e-072
gb|BU966811.1|BU966811 HB02G24r BC Hordeum vulgare subsp. v... 264 8e-069
gb|BM816457.1|BM816457 HC114A03_SK.ab1 HC Hordeum vulgare s... 256 2e-066
gb|BQ767019.1|BQ767019 EBro08_SQ007_B24_R root, 3 week, dro... 256 2e-066
gb|BQ768123.1|BQ768123 EBro08_SQ010_C20_R root, 3 week, dro... 256 2e-066
gb|BM816458.1|BM816458 HC111F11_T3.ab1 HC Hordeum vulgare s... 250 1e-064
gb|AV914542.1|AV914542 AV914542 K. Sato unpublished cDNA li... 248 5e-064
gb|BJ464862.1|BJ464862 BJ464862 K. Sato unpublished cDNA li... 248 5e-064
gb|BQ464007.1|BQ464007 HF01B12T HF Hordeum vulgare subsp. v... 246 2e-063
gb|BM099177.2|BM099177 EBes01_SQ002_H08_R embryo sac, 4-6 D... 246 2e-063
gb|BQ468808.1|BQ468808 HM02G12r HM Hordeum vulgare subsp. v... 244 8e-063
gb|BU969421.1|BU969421 HB11H20r BC Hordeum vulgare subsp. v... 244 8e-063
gb|BJ463089.1|BJ463089 BJ463089 K. Sato unpublished cDNA li... 242 3e-062
gb|BJ465500.1|BJ465500 BJ465500 K. Sato unpublished cDNA li... 242 3e-062
gb|BQ465238.1|BQ465238 HU03A12r HU Hordeum vulgare subsp. v... 240 1e-061
gb|BJ462824.1|BJ462824 BJ462824 K. Sato unpublished cDNA li... 236 2e-060
gb|BQ472898.1|BQ472898 HB01C16r BC Hordeum vulgare subsp. v... 236 2e-060
gb|BU988739.1|BU988739 HF18I22r HF Hordeum vulgare subsp. v... 236 2e-060
gb|BU974098.1|BU974098 HB26O06r BC Hordeum vulgare subsp. v... 234 7e-060
gb|BG368221.1|BG368221 HVSMEi0016L19f Hordeum vulgare 20 DA... 224 7e-057
gb|AV917415.1|AV917415 AV917415 K. Sato unpublished cDNA li... 222 3e-056
gb|BJ453090.1|BJ453090 BJ453090 K. Sato unpublished cDNA li... 222 3e-056
gb|AV916568.1|AV916568 AV916568 K. Sato unpublished cDNA li... 214 7e-054
gb|AV913501.1|AV913501 AV913501 K. Sato unpublished cDNA li... 212 3e-053
gb|AV915957.1|AV915957 AV915957 K. Sato unpublished cDNA li... 210 1e-052
gb|AV916184.1|AV916184 AV916184 K. Sato unpublished cDNA li... 208 4e-052
gb|BM372627.2|BM372627 EBpi05_SQ003_H21_R pistil, 8 DPA, no... 208 4e-052
gb|AL504563.1|AL504563 AL504563 Hordeum vulgare Barke roots... 206 2e-051
gb|BG368067.2|BG368067 HVSMEi0015I13f Hordeum vulgare 20 DA... 206 2e-051
gb|AV916476.1|AV916476 AV916476 K. Sato unpublished cDNA li... 206 2e-051
gb|BJ463221.1|BJ463221 BJ463221 K. Sato unpublished cDNA li... 206 2e-051
gb|BJ463813.1|BJ463813 BJ463813 K. Sato unpublished cDNA li... 206 2e-051
gb|BQ472888.1|BQ472888 HB01C18r BC Hordeum vulgare subsp. v... 206 2e-051
gb|BQ135359.1|BQ135359 LP10179 Lemma/palea-enriched cDNA li... 206 2e-051
gb|CA024129.1|CA024129 HZ48H03r HZ Hordeum vulgare subsp. v... 206 2e-051
gb|BQ470416.1|BQ470416 HX02O18r HX Hordeum vulgare subsp. v... 204 6e-051
gb|BQ472861.1|BQ472861 HB01E09r BC Hordeum vulgare subsp. v... 204 6e-051
gb|BU970733.1|BU970733 HB15I10r BC Hordeum vulgare subsp. v... 204 6e-051
gb|BU976026.1|BU976026 HA03A05r HA Hordeum vulgare subsp. v... 204 6e-051
gb|BU984404.1|BU984404 HF03N09r HF Hordeum vulgare subsp. v... 204 6e-051
gb|CD663174.1|CD663174 UCRHV18_04ce01_b1 Drought-stressed D... 204 6e-051
gb|BF627494.2|BF627494 HVSMEb0005A04f Hordeum vulgare seedl... 202 3e-050
gb|BF260655.2|BF260655 HVSMEf0022J11f Hordeum vulgare seedl... 202 3e-050
gb|BE455757.3|BE455757 HVSMEg0019K14f Hordeum vulgare pre-a... 202 3e-050
gb|BG369191.2|BG369191 HVSMEi0023A16f Hordeum vulgare 20 DA... 202 3e-050
gb|BF266874.3|BF266874 HV_CEa0016E19f Hordeum vulgare seedl... 202 3e-050
gb|AV908950.1|AV908950 AV908950 K. Sato unpublished cDNA li... 202 3e-050
gb|BJ466464.1|BJ466464 BJ466464 K. Sato unpublished cDNA li... 202 3e-050
gb|AL504107.1|AL504107 AL504107 Hordeum vulgare Barke roots... 200 1e-049
gb|AV914536.1|AV914536 AV914536 K. Sato unpublished cDNA li... 200 1e-049
gb|AL504434.1|AL504434 AL504434 Hordeum vulgare Barke roots... 198 4e-049
gb|BF065797.2|BF065797 HV_CEb0014A09f Hordeum vulgare seedl... 198 4e-049
gb|BF065820.2|BF065820 HV_CEb0014B09f Hordeum vulgare seedl... 198 4e-049
gb|BG415357.1|BG415357 HVSMEk0006C18f Hordeum vulgare testa... 198 4e-049
gb|BG343008.2|BG343008 HVSMEg0001L02f Hordeum vulgare pre-a... 198 4e-049
gb|AV913887.1|AV913887 AV913887 K. Sato unpublished cDNA li... 198 4e-049
gb|AV915183.1|AV915183 AV915183 K. Sato unpublished cDNA li... 198 4e-049
gb|BJ463156.1|BJ463156 BJ463156 K. Sato unpublished cDNA li... 198 4e-049
gb|BQ459847.1|BQ459847 HA07O17r HA Hordeum vulgare subsp. v... 198 4e-049
gb|BQ740138.1|BQ740138 HC109H04 HC Hordeum vulgare subsp. v... 198 4e-049
gb|BQ764724.1|BQ764724 EBca01_SQ004_O18_R carpel, pre-anthe... 198 4e-049
gb|BU971746.1|BU971746 HB19I23r BC Hordeum vulgare subsp. v... 198 4e-049
gb|BU987244.1|BU987244 HF14D10r HF Hordeum vulgare subsp. v... 198 4e-049
gb|BU995277.1|BU995277 HM09L24r HM Hordeum vulgare subsp. v... 198 4e-049
gb|CA013579.1|CA013579 HT08O12r HT Hordeum vulgare subsp. v... 198 4e-049
gb|CA014758.1|CA014758 HT12E10r HT Hordeum vulgare subsp. v... 198 4e-049
gb|CK125115.1|CK125115 BES1824106l23 BES1824 Hordeum vulgar... 198 4e-049
gb|BG414900.2|BG414900 HVSMEk0004C18f Hordeum vulgare testa... 196 2e-048
gb|AV914668.1|AV914668 AV914668 K. Sato unpublished cDNA li... 196 2e-048
gb|BF256695.2|BF256695 HVSMEf0010L18f Hordeum vulgare seedl... 194 6e-048
gb|BG416081.1|BG416081 HVSMEk0009L04f Hordeum vulgare testa... 194 6e-048
gb|BF630397.3|BF630397 HVSMEb0009B10f Hordeum vulgare seedl... 194 6e-048
gb|BJ450647.1|BJ450647 BJ450647 K. Sato unpublished cDNA li... 192 2e-047
gb|CA010014.1|CA010014 HT11O22u HT Hordeum vulgare subsp. v... 192 2e-047
gb|BF629587.2|BF629587 HVSMEb0013G23f Hordeum vulgare seedl... 190 1e-046
gb|BF267504.2|BF267504 HV_CEa0018C03f Hordeum vulgare seedl... 190 1e-046
gb|AV915418.1|AV915418 AV915418 K. Sato unpublished cDNA li... 190 1e-046
gb|BQ768211.1|BQ768211 EBro08_SQ011_E06_R root, 3 week, dro... 190 1e-046
gb|CD664083.1|CD664083 UCRHV18_07cf04_b1 Drought-stressed D... 190 1e-046
gb|CA026356.1|CA026356 HZ55K23r HZ Hordeum vulgare subsp. v... 188 4e-046
gb|BG414947.1|BG414947 HVSMEk0004G07f Hordeum vulgare testa... 186 2e-045
gb|BG416689.2|BG416689 HVSMEk0014C03f Hordeum vulgare testa... 186 2e-045
gb|AV914569.1|AV914569 AV914569 K. Sato unpublished cDNA li... 186 2e-045
gb|AV913139.1|AV913139 AV913139 K. Sato unpublished cDNA li... 184 6e-045
gb|AV915849.1|AV915849 AV915849 K. Sato unpublished cDNA li... 184 6e-045
gb|BM816455.1|BM816455 HC107E02_SK.ab1 HC Hordeum vulgare s... 184 6e-045
gb|BQ466744.1|BQ466744 HS01H05T HS Hordeum vulgare subsp. v... 184 6e-045
gb|BI776515.2|BI776515 EBpi05_SQ001_L02_R pistil, 8 DPA, no... 184 6e-045
gb|CA012980.1|CA012980 HT07A10r HT Hordeum vulgare subsp. v... 184 6e-045
gb|CA022083.1|CA022083 HZ42B23r HZ Hordeum vulgare subsp. v... 184 6e-045
gb|AL508334.1|AL508334 AL508334 Hordeum vulgare Barke devel... 182 2e-044
gb|AL508502.1|AL508502 AL508502 Hordeum vulgare Barke devel... 182 2e-044
gb|BF626281.2|BF626281 HVSMEa0018D19f Hordeum vulgare seedl... 182 2e-044
gb|AV914740.1|AV914740 AV914740 K. Sato unpublished cDNA li... 182 2e-044
gb|AV919838.1|AV919838 AV919838 K. Sato unpublished cDNA li... 182 2e-044
gb|BM816454.1|BM816454 HC107B04_SK.ab1 HC Hordeum vulgare s... 182 2e-044
gb|BJ452714.1|BJ452714 BJ452714 K. Sato unpublished cDNA li... 182 2e-044
gb|BJ460641.1|BJ460641 BJ460641 K. Sato unpublished cDNA li... 182 2e-044
gb|BJ463677.1|BJ463677 BJ463677 K. Sato unpublished cDNA li... 182 2e-044
gb|BJ465581.1|BJ465581 BJ465581 K. Sato unpublished cDNA li... 182 2e-044
gb|BJ467538.1|BJ467538 BJ467538 K. Sato unpublished cDNA li... 182 2e-044
gb|BJ467847.1|BJ467847 BJ467847 K. Sato unpublished cDNA li... 182 2e-044
gb|BJ462756.1|BJ462756 BJ462756 K. Sato unpublished cDNA li... 180 9e-044
gb|BQ767739.1|BQ767739 EBro08_SQ009_P15_R root, 3 week, dro... 180 9e-044
gb|AL505249.1|AL505249 AL505249 Hordeum vulgare Barke roots... 176 1e-042
gb|AL506525.1|AL506525 AL506525 Hordeum vulgare Barke devel... 176 1e-042
gb|BJ462706.1|BJ462706 BJ462706 K. Sato unpublished cDNA li... 176 1e-042
gb|BJ465544.1|BJ465544 BJ465544 K. Sato unpublished cDNA li... 176 1e-042
gb|BU973168.1|BU973168 HB23P13r BC Hordeum vulgare subsp. v... 176 1e-042
gb|BU998532.1|BU998532 HI11F20r HI Hordeum vulgare subsp. v... 176 1e-042
gb|CA015012.1|CA015012 HT13A03r HT Hordeum vulgare subsp. v... 176 1e-042
gb|CA024463.1|CA024463 HZ49G03r HZ Hordeum vulgare subsp. v... 176 1e-042
gb|AV916931.1|AV916931 AV916931 K. Sato unpublished cDNA li... 174 6e-042
gb|BM816456.1|BM816456 HC105H04_T3.ab1 HC Hordeum vulgare s... 174 6e-042
gb|BE438107.1|BE438107 SFR010.H09F990519 ITEC SFR Barley Le... 172 2e-041
gb|BJ465636.1|BJ465636 BJ465636 K. Sato unpublished cDNA li... 172 2e-041
gb|BU970099.1|BU970099 HB13J16r BC Hordeum vulgare subsp. v... 172 2e-041
gb|BU995037.1|BU995037 HM08P22r HM Hordeum vulgare subsp. v... 172 2e-041
gb|BI960064.1|BI960064 HVSMEn0023A19f Hordeum vulgare rachi... 168 4e-040
gb|AV918430.1|AV918430 AV918430 K. Sato unpublished cDNA li... 168 4e-040
gb|AV930915.1|AV930915 AV930915 K. Sato unpublished cDNA li... 168 4e-040
gb|BJ467678.1|BJ467678 BJ467678 K. Sato unpublished cDNA li... 168 4e-040
gb|CA027296.1|CA027296 HZ58I03r HZ Hordeum vulgare subsp. v... 168 4e-040
gb|CD662370.1|CD662370 UCRHV18_01dg06_b1 Drought-stressed D... 167 1e-039
gb|AV918094.1|AV918094 AV918094 K. Sato unpublished cDNA li... 165 6e-039
gb|AV922638.1|AV922638 AV922638 K. Sato unpublished cDNA li... 165 6e-039
gb|AL505397.1|AL505397 AL505397 Hordeum vulgare Barke roots... 163 2e-038
gb|BE215414.1|BE215414 HV_CEb0006L18f Hordeum vulgare seedl... 161 9e-038
gb|BG345113.2|BG345113 HVSMEg0018L21f Hordeum vulgare pre-a... 161 9e-038
gb|AV919760.1|AV919760 AV919760 K. Sato unpublished cDNA li... 161 9e-038
gb|AV921839.1|AV921839 AV921839 K. Sato unpublished cDNA li... 161 9e-038
gb|BJ464179.1|BJ464179 BJ464179 K. Sato unpublished cDNA li... 161 9e-038
gb|BU999159.1|BU999159 HI13H12r HI Hordeum vulgare subsp. v... 161 9e-038
gb|CA028178.1|CA028178 HZ61D14r HZ Hordeum vulgare subsp. v... 161 9e-038
gb|BQ460468.1|BQ460468 HA09H22r HA Hordeum vulgare subsp. v... 159 3e-037
gb|BQ768027.1|BQ768027 EBro08_SQ010_B16_R root, 3 week, dro... 159 3e-037
gb|AL504829.1|AL504829 AL504829 Hordeum vulgare Barke roots... 157 1e-036
gb|BU995562.1|BU995562 HM10K03r HM Hordeum vulgare subsp. v... 153 2e-035
gb|AV836759.1|AV836759 AV836759 K. Sato unpublished cDNA li... 151 8e-035
gb|BG344939.1|BG344939 HVSMEg0016P14f Hordeum vulgare pre-a... 151 8e-035
gb|BG415906.2|BG415906 HVSMEk0008P03f Hordeum vulgare testa... 151 8e-035
gb|AV918000.1|AV918000 AV918000 K. Sato unpublished cDNA li... 151 8e-035
gb|AV918018.1|AV918018 AV918018 K. Sato unpublished cDNA li... 151 8e-035
gb|AV918179.1|AV918179 AV918179 K. Sato unpublished cDNA li... 151 8e-035
gb|AV919613.1|AV919613 AV919613 K. Sato unpublished cDNA li... 151 8e-035
gb|AV919619.1|AV919619 AV919619 K. Sato unpublished cDNA li... 151 8e-035
gb|AV919650.1|AV919650 AV919650 K. Sato unpublished cDNA li... 151 8e-035
gb|AV920111.1|AV920111 AV920111 K. Sato unpublished cDNA li... 151 8e-035
gb|AV920506.1|AV920506 AV920506 K. Sato unpublished cDNA li... 151 8e-035
gb|AV920963.1|AV920963 AV920963 K. Sato unpublished cDNA li... 151 8e-035
gb|AV921073.1|AV921073 AV921073 K. Sato unpublished cDNA li... 151 8e-035
gb|AV921500.1|AV921500 AV921500 K. Sato unpublished cDNA li... 151 8e-035
gb|AV921606.1|AV921606 AV921606 K. Sato unpublished cDNA li... 151 8e-035
gb|AV921608.1|AV921608 AV921608 K. Sato unpublished cDNA li... 151 8e-035
gb|AV921676.1|AV921676 AV921676 K. Sato unpublished cDNA li... 151 8e-035
gb|AV922055.1|AV922055 AV922055 K. Sato unpublished cDNA li... 151 8e-035
gb|AV922132.1|AV922132 AV922132 K. Sato unpublished cDNA li... 151 8e-035
gb|AV922594.1|AV922594 AV922594 K. Sato unpublished cDNA li... 151 8e-035
gb|AV935432.1|AV935432 AV935432 K. Sato unpublished cDNA li... 151 8e-035
gb|AV936424.1|AV936424 AV936424 K. Sato unpublished cDNA li... 151 8e-035
gb|AV936425.1|AV936425 AV936425 K. Sato unpublished cDNA li... 151 8e-035
gb|AJ463434.1|AJ463434 AJ463434 S00002 Hordeum vulgare subs... 151 8e-035
gb|BJ460264.1|BJ460264 BJ460264 K. Sato unpublished cDNA li... 151 8e-035
gb|BJ465792.1|BJ465792 BJ465792 K. Sato unpublished cDNA li... 151 8e-035
gb|BJ466960.1|BJ466960 BJ466960 K. Sato unpublished cDNA li... 151 8e-035
gb|BJ467641.1|BJ467641 BJ467641 K. Sato unpublished cDNA li... 151 8e-035
gb|BJ475667.1|BJ475667 BJ475667 K. Sato unpublished cDNA li... 151 8e-035
gb|BJ476619.1|BJ476619 BJ476619 K. Sato unpublished cDNA li... 151 8e-035
gb|BQ656409.1|BQ656409 HA04I22u HA Hordeum vulgare subsp. v... 151 8e-035
gb|BU996214.1|BU996214 HM12O01r HM Hordeum vulgare subsp. v... 151 8e-035
gb|BU999712.1|BU999712 HI15H10r HI Hordeum vulgare subsp. v... 151 8e-035
gb|CA011773.1|CA011773 HT03I03r HT Hordeum vulgare subsp. v... 151 8e-035
gb|CA013236.1|CA013236 HT07M16r HT Hordeum vulgare subsp. v... 151 8e-035
gb|CA031204.1|CA031204 HX09E20r HX Hordeum vulgare subsp. v... 151 8e-035
gb|CV060044.1|CV060044 BNEL53g4 Barley EST endosperm librar... 151 8e-035
gb|CV062203.1|CV062203 BNEL77d9 Barley EST endosperm librar... 151 8e-035
gb|AL506801.1|AL506801 AL506801 Hordeum vulgare Barke devel... 149 3e-034
gb|BF260871.2|BF260871 HVSMEf0023C15f Hordeum vulgare seedl... 149 3e-034
gb|AV910839.1|AV910839 AV910839 K. Sato unpublished cDNA li... 149 3e-034
gb|BQ659620.1|BQ659620 HF01B12w HF Hordeum vulgare subsp. v... 149 3e-034
gb|AJ463433.1|AJ463433 AJ463433 S00002 Hordeum vulgare subs... 147 1e-033
gb|BQ764781.1|BQ764781 EBca01_SQ004_K22_R carpel, pre-anthe... 147 1e-033
gb|AL502995.1|AL502995 AL502995 Hordeum vulgare Barke roots... 145 5e-033
gb|BQ469431.1|BQ469431 HM04K24r HM Hordeum vulgare subsp. v... 145 5e-033
gb|BQ660240.1|BQ660240 HI01J21w HI Hordeum vulgare subsp. v... 145 5e-033
gb|BQ662267.1|BQ662267 HS01H05w HS Hordeum vulgare subsp. v... 145 5e-033
gb|BM442059.2|BM442059 EBan01_SQ002_B02_R anther, yellow st... 145 5e-033
gb|BM098095.2|BM098095 EBpi03_SQ002_I15_R pistil, 4 DPA, no... 145 5e-033
gb|BQ756060.1|BQ756060 EBem05_SQ001_I01_R embryo, 14 DPA, n... 145 5e-033
gb|BU982441.1|BU982441 HA26J01r HA Hordeum vulgare subsp. v... 145 5e-033
gb|CA015761.1|CA015761 HV12D06u HV Hordeum vulgare subsp. v... 145 5e-033
gb|CA019216.1|CA019216 HV11E05r HV Hordeum vulgare subsp. v... 145 5e-033
gb|CB859717.1|CB859717 HI11F20w HI Hordeum vulgare subsp. v... 145 5e-033
gb|CB875769.1|CB875769 HX09E20w HX Hordeum vulgare subsp. v... 145 5e-033
gb|CB875855.1|CB875855 HX09I20w HX Hordeum vulgare subsp. v... 145 5e-033
gb|BQ764578.1|BQ764578 EBca01_SQ004_E08_R carpel, pre-anthe... 143 2e-032
gb|CA016984.1|CA016984 HV05D24u HV Hordeum vulgare subsp. v... 143 2e-032
gb|AL509214.1|AL509214 AL509214 Hordeum vulgare Barke devel... 141 8e-032
gb|BG414221.1|BG414221 HVSMEk0001E11f Hordeum vulgare testa... 141 8e-032
gb|AV912804.1|AV912804 AV912804 K. Sato unpublished cDNA li... 141 8e-032
gb|AV915715.1|AV915715 AV915715 K. Sato unpublished cDNA li... 141 8e-032
gb|AV917541.1|AV917541 AV917541 K. Sato unpublished cDNA li... 141 8e-032
gb|AV920824.1|AV920824 AV920824 K. Sato unpublished cDNA li... 141 8e-032
gb|AJ463431.1|AJ463431 AJ463431 S00002 Hordeum vulgare subs... 141 8e-032
gb|BJ458070.1|BJ458070 BJ458070 K. Sato unpublished cDNA li... 141 8e-032
gb|BQ663534.1|BQ663534 HU03A12u HU Hordeum vulgare subsp. v... 141 8e-032
gb|BQ664562.1|BQ664562 HV03O01u HV Hordeum vulgare subsp. v... 141 8e-032
gb|CA009997.1|CA009997 HT12E10u HT Hordeum vulgare subsp. v... 141 8e-032
gb|CB880462.1|CB880462 HM06J22w HM Hordeum vulgare subsp. v... 141 8e-032
gb|CB881705.1|CB881705 HM10K03w HM Hordeum vulgare subsp. v... 141 8e-032
gb|BQ664948.1|BQ664948 HX01I04w HX Hordeum vulgare subsp. v... 139 3e-031
gb|BI959456.1|BI959456 HVSMEn0019L20f Hordeum vulgare rachi... 137 1e-030
gb|BM097358.2|BM097358 EBro01_SQ004_O12_R root, 3 week, hyd... 137 1e-030
gb|CB874837.1|CB874837 HX06H11w HX Hordeum vulgare subsp. v... 137 1e-030
gb|CB881174.1|CB881174 HM08P22w HM Hordeum vulgare subsp. v... 137 1e-030
gb|AL511558.1|AL511558 AL511558 Hordeum vulgare Barke devel... 135 5e-030
gb|AL511702.1|AL511702 AL511702 Hordeum vulgare Barke devel... 135 5e-030
gb|BM441568.2|BM441568 EBma05_SQ004_N23_R maternal, 12 DPA,... 135 5e-030
gb|CA010685.1|CA010685 HT08O12u HT Hordeum vulgare subsp. v... 135 5e-030
gb|CA011125.1|CA011125 HT07A10u HT Hordeum vulgare subsp. v... 135 5e-030
gb|CB881417.1|CB881417 HM09L24w HM Hordeum vulgare subsp. v... 135 5e-030
gb|AL510580.1|AL510580 AL510580 Hordeum vulgare Barke devel... 133 2e-029
gb|BF259034.2|BF259034 HVSMEf0017H11f Hordeum vulgare seedl... 133 2e-029
gb|AW983512.2|AW983512 HVSMEg0010O04f Hordeum vulgare pre-a... 133 2e-029
gb|AV916759.1|AV916759 AV916759 K. Sato unpublished cDNA li... 133 2e-029
gb|AV932801.1|AV932801 AV932801 K. Sato unpublished cDNA li... 133 2e-029
gb|AJ463432.1|AJ463432 AJ463432 S00002 Hordeum vulgare subs... 131 8e-029
gb|AL502111.1|AL502111 AL502111 Hordeum vulgare Barke roots... 129 3e-028
gb|BF253939.2|BF253939 HVSMEf0002I19f Hordeum vulgare seedl... 129 3e-028
gb|BF254122.3|BF254122 HVSMEf0003B09f Hordeum vulgare seedl... 129 3e-028
gb|BJ465592.1|BJ465592 BJ465592 K. Sato unpublished cDNA li... 129 3e-028
gb|BJ467253.1|BJ467253 BJ467253 K. Sato unpublished cDNA li... 129 3e-028
gb|BI949012.1|BI949012 HVSMEl0012A16f Hordeum vulgare spike... 127 1e-027
gb|BF265511.1|BF265511 HV_CEa0012H22f Hordeum vulgare seedl... 127 1e-027
gb|AV914831.1|AV914831 AV914831 K. Sato unpublished cDNA li... 127 1e-027
gb|BJ472668.1|BJ472668 BJ472668 K. Sato unpublished cDNA li... 127 1e-027
gb|BQ760817.1|BQ760817 EBro03_SQ003_J01_R root, 3 week, wat... 127 1e-027
gb|CA025022.1|CA025022 HZ51A02r HZ Hordeum vulgare subsp. v... 127 1e-027
gb|CA028296.1|CA028296 HZ61J02r HZ Hordeum vulgare subsp. v... 127 1e-027
gb|BG344643.2|BG344643 HVSMEg0009O10f Hordeum vulgare pre-a... 125 5e-027
gb|BJ462567.1|BJ462567 BJ462567 K. Sato unpublished cDNA li... 125 5e-027
gb|BJ467192.1|BJ467192 BJ467192 K. Sato unpublished cDNA li... 125 5e-027
gb|BI780419.2|BI780419 EBem08_SQ001_A05_R embryo, 40 DPA, n... 125 5e-027
gb|BQ665296.1|BQ665296 HX02O18u HX Hordeum vulgare subsp. v... 123 2e-026
gb|BU971068.1|BU971068 HB16I06r BC Hordeum vulgare subsp. v... 123 2e-026
gb|BU999941.1|BU999941 HS17A13u HS Hordeum vulgare subsp. v... 123 2e-026
gb|CA001517.1|CA001517 HS17L15u HS Hordeum vulgare subsp. v... 123 2e-026
gb|CA005215.1|CA005215 HU11I08u HU Hordeum vulgare subsp. v... 123 2e-026
gb|CA016693.1|CA016693 HV06P03u HV Hordeum vulgare subsp. v... 123 2e-026
gb|BF631468.2|BF631468 HVSMEb0016A17f Hordeum vulgare seedl... 121 7e-026
gb|AV918265.1|AV918265 AV918265 K. Sato unpublished cDNA li... 121 7e-026
gb|AL504671.1|AL504671 AL504671 Hordeum vulgare Barke roots... 119 3e-025
gb|AW982894.2|AW982894 HVSMEg0004H22f Hordeum vulgare pre-a... 119 3e-025
gb|BJ464454.1|BJ464454 BJ464454 K. Sato unpublished cDNA li... 119 3e-025
gb|BQ469123.1|BQ469123 HM03H11r HM Hordeum vulgare subsp. v... 119 3e-025
gb|BU977286.1|BU977286 HA11C16u HA Hordeum vulgare subsp. v... 119 3e-025
gb|CA001282.1|CA001282 HS18K16u HS Hordeum vulgare subsp. v... 119 3e-025
gb|CA011517.1|CA011517 HT05E15u HT Hordeum vulgare subsp. v... 119 3e-025
gb|AL510225.1|AL510225 AL510225 Hordeum vulgare Barke devel... 117 1e-024
gb|BU999794.1|BU999794 HI15N04r HI Hordeum vulgare subsp. v... 117 1e-024
gb|BQ470010.1|BQ470010 HX01I04T HX Hordeum vulgare subsp. v... 115 5e-024
gb|BG416058.1|BG416058 HVSMEk0009J17f Hordeum vulgare testa... 113 2e-023
gb|AJ463430.1|AJ463430 AJ463430 S00002 Hordeum vulgare subs... 113 2e-023
gb|CK124833.1|CK124833 BES1824110i10 BES1824 Hordeum vulgar... 113 2e-023
gb|BF256939.3|BF256939 HVSMEf0011G21f Hordeum vulgare seedl... 111 7e-023
gb|CA015584.1|CA015584 HT14M05r HT Hordeum vulgare subsp. v... 111 7e-023
gb|AL507197.1|AL507197 AL507197 Hordeum vulgare Barke devel... 109 3e-022
gb|BU966763.1|BU966763 HB02E15r BC Hordeum vulgare subsp. v... 109 3e-022
gb|BG343194.1|BG343194 HVSMEg0005A22f Hordeum vulgare pre-a... 107 1e-021
gb|BU999082.1|BU999082 HI13C20r HI Hordeum vulgare subsp. v... 107 1e-021
gb|CA022173.1|CA022173 HZ42F21r HZ Hordeum vulgare subsp. v... 107 1e-021
gb|AL501342.1|AL501342 AL501342 Hordeum vulgare Barke roots... 105 4e-021
gb|BF268035.2|BF268035 HV_CEa0019K15f Hordeum vulgare seedl... 105 4e-021
gb|BJ463515.1|BJ463515 BJ463515 K. Sato unpublished cDNA li... 105 4e-021
gb|BQ467225.1|BQ467225 HS03B04r HS Hordeum vulgare subsp. v... 105 4e-021
gb|BI777072.2|BI777072 EBpi03_SQ001_N02_R pistil, 4 DPA, no... 105 4e-021
gb|BU979352.1|BU979352 HA15O04r HA Hordeum vulgare subsp. v... 105 4e-021
gb|BU999644.1|BU999644 HI15D09r HI Hordeum vulgare subsp. v... 105 4e-021
gb|CA022862.1|CA022862 HZ44J04r HZ Hordeum vulgare subsp. v... 105 4e-021
gb|AL505390.1|AL505390 AL505390 Hordeum vulgare Barke roots... 101 7e-020
gb|AV914989.1|AV914989 AV914989 K. Sato unpublished cDNA li... 101 7e-020
gb|BQ664723.1|BQ664723 HV04J07u HV Hordeum vulgare subsp. v... 101 7e-020
gb|CA008610.1|CA008610 HU11I08r HU Hordeum vulgare subsp. v... 101 7e-020
gb|AL508135.1|AL508135 AL508135 Hordeum vulgare Barke devel... 98 1e-018
gb|BF619348.2|BF619348 HVSMEc0016I23f Hordeum vulgare seedl... 98 1e-018
gb|BM370195.2|BM370195 EBro08_SQ003_E13_R root, 3 week, dro... 98 1e-018
gb|AJ463435.1|AJ463435 AJ463435 S00002 Hordeum vulgare subs... 96 4e-018
gb|AL501444.1|AL501444 AL501444 Hordeum vulgare Barke roots... 94 2e-017
gb|BF261936.3|BF261936 HV_CEa0002J24f Hordeum vulgare seedl... 94 2e-017
gb|AV916252.1|AV916252 AV916252 K. Sato unpublished cDNA li... 94 2e-017
gb|BU979665.1|BU979665 HA16N24r HA Hordeum vulgare subsp. v... 94 2e-017
gb|CA023152.1|CA023152 HZ45G04r HZ Hordeum vulgare subsp. v... 94 2e-017
gb|CA028289.1|CA028289 HZ61I19r HZ Hordeum vulgare subsp. v... 94 2e-017
gb|AL503926.1|AL503926 AL503926 Hordeum vulgare Barke roots... 92 7e-017
gb|AL504381.1|AL504381 AL504381 Hordeum vulgare Barke roots... 88 1e-015
gb|BJ450604.1|BJ450604 BJ450604 K. Sato unpublished cDNA li... 88 1e-015
gb|BQ658089.1|BQ658089 HA05M08u HA Hordeum vulgare subsp. v... 88 1e-015
gb|BQ661431.1|BQ661431 HM03H11u HM Hordeum vulgare subsp. v... 88 1e-015
gb|CA016612.1|CA016612 HV06L12u HV Hordeum vulgare subsp. v... 88 1e-015
gb|BQ761339.1|BQ761339 EBro06_SQ001_D16_R root, 3 week, dro... 86 4e-015
gb|BU969977.1|BU969977 HB13D13r BC Hordeum vulgare subsp. v... 86 4e-015
gb|CA025928.1|CA025928 HZ53I24r HZ Hordeum vulgare subsp. v... 86 4e-015
gb|BF253438.3|BF253438 HVSMEf0001G18f Hordeum vulgare seedl... 84 2e-014
gb|BG343817.2|BG343817 HVSMEg0006N09f Hordeum vulgare pre-a... 84 2e-014
gb|AV922251.1|AV922251 AV922251 K. Sato unpublished cDNA li... 84 2e-014
gb|BJ460538.1|BJ460538 BJ460538 K. Sato unpublished cDNA li... 82 6e-014
gb|BI960188.1|BI960188 HVSMEn0023K02f Hordeum vulgare rachi... 78 1e-012
gb|BF619356.2|BF619356 HVSMEc0016K15f Hordeum vulgare seedl... 76 4e-012
gb|AV916187.1|AV916187 AV916187 K. Sato unpublished cDNA li... 76 4e-012
gb|BJ452992.1|BJ452992 BJ452992 K. Sato unpublished cDNA li... 76 4e-012
gb|BM099067.2|BM099067 EBpi05_SQ002_N17_R pistil, 8 DPA, no... 76 4e-012
gb|BQ754801.1|BQ754801 EBed01_SQ003_N05_R endosperm, 6 DPA,... 76 4e-012
gb|CA006192.1|CA006192 HU13B16u HU Hordeum vulgare subsp. v... 76 4e-012
gb|CB882468.1|CB882468 HL01P03w HL Hordeum vulgare subsp. v... 76 4e-012
gb|BQ753359.1|BQ753359 EBan01_SQ004_A18_R anther, yellow st... 74 2e-011
gb|BQ756662.1|BQ756662 EBem09_SQ003_G06_R embryo, 1 Day ger... 74 2e-011
gb|BF256972.2|BF256972 HVSMEf0011I06f Hordeum vulgare seedl... 70 2e-010
gb|BF261026.3|BF261026 HVSMEf0023J02f Hordeum vulgare seedl... 70 2e-010
gb|BQ756760.1|BQ756760 EBem09_SQ003_K20_R embryo, 1 Day ger... 70 2e-010
gb|CA006012.1|CA006012 HU05N23u HU Hordeum vulgare subsp. v... 70 2e-010
gb|CA023516.1|CA023516 HZ46H19r HZ Hordeum vulgare subsp. v... 70 2e-010
gb|BI954112.1|BI954112 HVSMEm0016D23f Hordeum vulgare green... 68 1e-009
gb|BE060658.3|BE060658 HVSMEg0012O09f Hordeum vulgare pre-a... 68 1e-009
gb|BQ763479.1|BQ763479 EBro02_SQ008_C15_R root, 3 week, hyd... 66 4e-009
gb|AJ461917.1|AJ461917 AJ461917 S00002 Hordeum vulgare subs... 64 2e-008
gb|AL501759.1|AL501759 AL501759 Hordeum vulgare Barke roots... 62 6e-008
gb|BM368244.2|BM368244 EBed01_SQ002_J08_R endosperm, 6 DPA,... 62 6e-008
gb|BQ759959.1|BQ759959 EBpi05_SQ004_P24_R pistil, 8 DPA, no... 62 6e-008
gb|CA031038.1|CA031038 HX08N10r HX Hordeum vulgare subsp. v... 62 6e-008
gb|BG343462.2|BG343462 HVSMEg0005N07f Hordeum vulgare pre-a... 58 9e-007
gb|BE194742.3|BE194742 HVSMEh0086L14f Hordeum vulgare 5-45 ... 58 9e-007
gb|AV916494.1|AV916494 AV916494 K. Sato unpublished cDNA li... 58 9e-007
gb|CA007509.1|CA007509 HU08C23r HU Hordeum vulgare subsp. v... 58 9e-007
gb|BI950140.1|BI950140 HVSMEl0019A03f Hordeum vulgare spike... 56 4e-006
gb|BG415334.2|BG415334 HVSMEk0006B11f Hordeum vulgare testa... 56 4e-006
gb|BJ470867.1|BJ470867 BJ470867 K. Sato unpublished cDNA li... 56 4e-006
gb|BM099722.2|BM099722 EBes01_SQ004_B13_R embryo sac, 4-6 D... 56 4e-006
gb|CA010299.1|CA010299 HT10D23u HT Hordeum vulgare subsp. v... 56 4e-006
gb|BF625847.2|BF625847 HVSMEa0013N10f Hordeum vulgare seedl... 54 1e-005
gb|BE196035.2|BE196035 HVSMEh0091C22f Hordeum vulgare 5-45 ... 54 1e-005
gb|BE216170.1|BE216170 HV_CEb0009K22f Hordeum vulgare seedl... 54 1e-005
gb|BQ462657.1|BQ462657 HI01J21T HI Hordeum vulgare subsp. v... 54 1e-005
gb|BU977285.1|BU977285 HA11C16r HA Hordeum vulgare subsp. v... 54 1e-005
gb|BU980952.1|BU980952 HA22C24r HA Hordeum vulgare subsp. v... 54 1e-005
gb|CA017956.1|CA017956 HV06P03r HV Hordeum vulgare subsp. v... 54 1e-005
gb|CA024690.1|CA024690 HZ50A10r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|CA026951.1|CA026951 HZ57H05r HZ Hordeum vulgare subsp. v... 54 1e-005
gb|BF268002.2|BF268002 HV_CEa0019I23f Hordeum vulgare seedl... 52 6e-005
gb|BF256890.3|BF256890 HVSMEf0011E17f Hordeum vulgare seedl... 52 6e-005
gb|CA014642.1|CA014642 HT11O22r HT Hordeum vulgare subsp. v... 50 2e-004
gb|BF623240.2|BF623240 HVSMEa0015O19f Hordeum vulgare seedl... 46 0.004
gb|BF255756.1|BF255756 HVSMEf0007L15f Hordeum vulgare seedl... 44 0.014
gb|BF629876.2|BF629876 HVSMEb0007D01f Hordeum vulgare seedl... 44 0.014
gb|BF254626.2|BF254626 HVSMEf0004I20f Hordeum vulgare seedl... 44 0.014
gb|BE559401.1|BE559401 HV_CEb0024H21f Hordeum vulgare seedl... 44 0.014
gb|BF254195.3|BF254195 HVSMEf0003E13f Hordeum vulgare seedl... 44 0.014
gb|BM816459.1|BM816459 HC05H08_T3.ab1 HC Hordeum vulgare su... 44 0.014
gb|BQ467059.1|BQ467059 HS02H05r HS Hordeum vulgare subsp. v... 44 0.014
gb|BQ471922.1|BQ471922 HV03O01r HV Hordeum vulgare subsp. v... 44 0.014
gb|BU980767.1|BU980767 HA21K05r HA Hordeum vulgare subsp. v... 44 0.014
gb|CA004159.1|CA004159 HS16M02r HS Hordeum vulgare subsp. v... 44 0.014
gb|BF265708.2|BF265708 HV_CEa0013C01f Hordeum vulgare seedl... 40 0.22
gb|AV910279.1|AV910279 AV910279 K. Sato unpublished cDNA li... 40 0.22
>gb|BU978000.1|BU978000 HA12G12r HA Hordeum vulgare subsp. vulgare cDNA clone HA12G12
5-PRIME, mRNA sequence
Length = 648
Score = 303 bits (153), Expect = 9e-081
Identities = 507/623 (81%), Gaps = 4/623 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 631 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 572
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 571 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 512
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 511 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 452
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 451 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 392
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 391 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 332
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 331 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 272
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
|| ||||||||||| |||||||| || |||||||||||||| ||||| || ||| |
Sbjct: 271 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttgg 214
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
||||| || |||||||||| | || | || ||||| || || || || ||||| |
Sbjct: 213 atgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaaca 154
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacc 995
| ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||| |
Sbjct: 153 gcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaac 94
Query: 996 catccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttca 1055
|||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||||
Sbjct: 93 catccttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttca 34
Query: 1056 atgcctgtgtggggaagtaacgg 1078
| ||||| || ||||||||||||
Sbjct: 33 aagcctgagttgggaagtaacgg 11
>gb|CA007503.1|CA007503 HU08C17r HU Hordeum vulgare subsp. vulgare cDNA clone HU08C17
5-PRIME, mRNA sequence
Length = 600
Score = 291 bits (147), Expect = 4e-077
Identities = 468/575 (81%)
Strand = Plus / Minus
Query: 566 tacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtag 625
||||| |||| ||||||||||||||||||||| || ||||| || || || || || ||
Sbjct: 583 tacttcacggactcaccagatgtcatcatcatacggcggcgcacggtatcgataggatac 524
Query: 626 gaggcaaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagtta 685
||||| || |||||||| || |||| ||||| || |||||||| ||||| | ||||||
Sbjct: 523 gaggcgagcccagcacccatcgttacgccccagccaagcaagaaactggcaagcaagtta 464
Query: 686 tcctgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaaga 745
|||| || | ||| || |||| | | ||||| |||||||| ||||| || |||||||||
Sbjct: 463 tcctcaagagaaccgacgagaaccgcgggcttgagggagtcgtacattccgaagtaaaga 404
Query: 746 cctcggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaata 805
||||| || || ||||| ||||||||||| | ||||| |||||||| | ||| || | |
Sbjct: 403 cctcgataaacgatgatgcccacacaagagacgttgaacccacggtacaagccgcggaca 344
Query: 806 ccatcactggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcacca 865
|| || || |||||||||||||| || ||||| |||| || | ||||||||||| |||
Sbjct: 343 ccgtcgctagcaagggtcttgcgatagacatccacgatgccgtcgaactgcctctggcca 284
Query: 866 cccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatag 925
||| |||||||||||||||||||||||| | ||| || || ||||| || ||||||||
Sbjct: 283 cccacctttgcagccttggcatcattggcgagacgagttcgagcgtaatcgagagaatac 224
Query: 926 acaaagaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccac 985
||||| || ||||| ||||||| || ||||| || ||||| | || ||| ||||||
Sbjct: 223 acaaacaacagagaagaagcaccggcggctcctccggaagctatgttgccaaagaaccac 164
Query: 986 ttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaac 1045
||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||
Sbjct: 163 ttccagtacccatccttgtcctttctaaagttgaacattcgcttaaagtggtccttgaag 104
Query: 1046 gcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccac 1105
||||||||||| ||||| || |||||||||||||| ||||| |||||||| || |||||
Sbjct: 103 gcaaagttcaaggcctgagtcgggaagtaacggataacattggctgtgttacccctccaa 44
Query: 1106 agtgagacaaaaccctcatctctgattgtccggcc 1140
|||| || | |||||||||| | ||||| |||||
Sbjct: 43 agtgcaaccacaccctcatcttttattgtgcggcc 9
>gb|AV925778.1|AV925778 AV925778 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd25m17 5', mRNA sequence
Length = 606
Score = 281 bits (142), Expect = 3e-074
Identities = 481/592 (81%), Gaps = 4/592 (0%)
Strand = Plus / Minus
Query: 494 ccagcacccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtcc 553
||||||||||||||||||||||||| ||||||||| || | ||||| |||||||| |||
Sbjct: 605 ccagcacccttgaagagggacttggcaccctccttagccaggatctgattgaaagcatcc 546
Query: 554 aaggagctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtg 613
|||||||| ||||||||||| ||||| || || ||||||||||| | | ||| || |||
Sbjct: 545 aaggagctcttgtacttgacagcctccccggaggtcatcatcatccttctgcggaccgtg 486
Query: 614 tcaatggggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctg 673
||||||||||| || ||||| || ||||| |||| || ||| || || ||||||
Sbjct: 485 tcaatggggtaagatgcaagacccgcaccgttggtgatcaaccaaccaagagcaaagctg 426
Query: 674 gctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 733
|| |||||||| ||||| || || ||| || || |||||||| || ||||||||||
Sbjct: 425 gcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtcatacagc 366
Query: 734 ccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatccacggtag 793
|||||||| ||||| ||||| |||||||| || ||||| || || ||||||||||||||
Sbjct: 365 ccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatccacggtaa 306
Query: 794 aggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtccattga 851
|| ||| ||||||||| ||| | || ||||||||||| |||||||| || |||||||
Sbjct: 305 agcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggccattga 248
Query: 852 actgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgt 911
||||||| ||||| || ||| | ||||| || |||||||||| | || | || |
Sbjct: 247 actgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcctagcat 188
Query: 912 agtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagat 971
|||| || || || || ||||| || ||| |||||||||| || ||||||||||| || |
Sbjct: 187 agtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaaggt 128
Query: 972 ttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttga 1031
| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | |||||
Sbjct: 127 tgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttga 68
Query: 1032 agtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgac 1083
||| ||||||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct: 67 agtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgac 16
>gb|CA007721.1|CA007721 HU08M12r HU Hordeum vulgare subsp. vulgare cDNA clone HU08M12
5-PRIME, mRNA sequence
Length = 566
Score = 276 bits (139), Expect = 2e-072
Identities = 453/558 (81%)
Strand = Plus / Minus
Query: 583 agatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcacc 642
||||||||||||||| || ||||| || || || || || || ||||| || ||||||||
Sbjct: 566 agatgtcatcatcatacgncggcgcacggtatcgataggatacgaggcgagcccagcacc 507
Query: 643 aatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaac 702
|| |||| ||||| || |||||||| ||||| | |||||||||| || | ||| ||
Sbjct: 506 catcgttacgccccagccaagcaagaaactggcaagcaagttatcctcaagagaaccgac 447
Query: 703 aagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgat 762
|||| | | ||||| |||||||| ||||| || |||||||||||||| || || |||||
Sbjct: 446 gagaaccgcgggcttgagggagtcgtacattccgaagtaaagacctcgataaacgatgat 387
Query: 763 ccccacacaagatatattgaatccacggtagaggccacgaataccatcactggcaagggt 822
||||||||||| | ||||| |||||||| | ||| || | ||| || || ||||||||
Sbjct: 386 gcccacacaagagacgttgaacccacggtacaagccgcggacaccgtcgctagcaagggt 327
Query: 823 cttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcctt 882
|||||| || ||||| |||| || | ||||||||||| |||||| ||||||||||||
Sbjct: 326 cttgcgatagacatccacgatgccgtcgaactgcctctggccacccacctttgcagcctt 267
Query: 883 ggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagca 942
|||||||||||| | ||| || || ||||| || |||||||| ||||| || ||||| |
Sbjct: 266 ggcatcattggcgagacgagttcgagcgtaatcgagagaatacacaaacaacagagaaga 207
Query: 943 agcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcctt 1002
|||||| || ||||| || ||||| | || ||| |||||||||||||||||||||||
Sbjct: 206 agcaccggcggctcctccggaagctatgttgccaaagaaccacttccagtacccatcctt 147
Query: 1003 gtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctg 1062
|||||| ||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 146 gtcctttctaaagttgaacattcgcttaaagtggtccttgaaggcaaagttcaaggcctg 87
Query: 1063 tgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctc 1122
|| |||||||||||||| ||||| |||||||| || ||||| |||| || | ||||||
Sbjct: 86 agtcgggaagtaacggataacattggctgtgttacccctccaaagtgcaaccacaccctc 27
Query: 1123 atctctgattgtccggcc 1140
|||| | ||||| |||||
Sbjct: 26 atcttttattgtgcggcc 9
>gb|BU966811.1|BU966811 HB02G24r BC Hordeum vulgare subsp. vulgare cDNA clone HB02G24
5-PRIME, mRNA sequence
Length = 606
Score = 264 bits (133), Expect = 8e-069
Identities = 475/587 (80%), Gaps = 4/587 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 595 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 536
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 535 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 476
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 475 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 416
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 415 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 356
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 355 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 296
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 295 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 236
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
|| ||||||||||| |||||||| || |||||||||||||| ||||| || ||| |
Sbjct: 235 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttgg 178
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
||||| || |||||||||| | || | || ||||| || || || || ||||| |
Sbjct: 177 atgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaaca 118
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacc 995
| ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||| |
Sbjct: 117 gcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaac 58
Query: 996 catccttgtccttcttaaagttgaacatgcgcttgaagtgatccttg 1042
|||||||||||||||| ||||||||||| | |||||||| |||||||
Sbjct: 57 catccttgtccttcttgaagttgaacatcctcttgaagtaatccttg 11
>gb|BM816457.1|BM816457 HC114A03_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114A03_SK.ab1 similar to ADP,ATP CARRIER
PROTEIN,ADP,ATP CARRIER PROTEIN 1,, mRNA sequence
Length = 894
Score = 256 bits (129), Expect = 2e-066
Identities = 408/499 (81%), Gaps = 4/499 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| ||| || |||||||| || ||||||
Sbjct: 648 aagctggcaaagaagttgtcctggagagtgccagtaaggagaactggctttagagagtca 589
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 588 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 529
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 528 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 471
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 470 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 411
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 410 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 351
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 350 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 291
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacat 1085
|||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| |
Sbjct: 290 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgt 231
Query: 1086 tagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagc 1145
| || || ||||||||||||| |||| |||| || || || |||| || || |||||||
Sbjct: 230 tggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagc 171
Query: 1146 agtccccaatacccttgta 1164
|||| ||||||||||||||
Sbjct: 170 agtcaccaatacccttgta 152
Score = 52.0 bits (26), Expect = 6e-005
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 494 ccagcacccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtcc 553
||||||||||| |||||| ||||| | ||||||| || | || || |||||||| |||
Sbjct: 824 ccagcaccctttaagaggtccttggcaacctccttagccaggatttgattgaaagcatcc 765
Query: 554 aaggagctgttgtacttgacggcctc 579
||| |||| ||||||||||| |||||
Sbjct: 764 aagtagctcttgtacttgacagcctc 739
>gb|BQ767019.1|BQ767019 EBro08_SQ007_B24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_B24 5', mRNA sequence
Length = 685
Score = 256 bits (129), Expect = 2e-066
Identities = 408/499 (81%), Gaps = 4/499 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| ||| || |||||||| || ||||||
Sbjct: 630 aagctggcaaagaagttgtcctggagagtgccagtaaggagaactggctttagagagtca 571
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 570 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 511
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 510 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 453
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 452 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 393
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 392 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 333
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 332 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 273
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacat 1085
|||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| |
Sbjct: 272 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgt 213
Query: 1086 tagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagc 1145
| || || ||||||||||||| |||| |||| || || || |||| || || |||||||
Sbjct: 212 tggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagc 153
Query: 1146 agtccccaatacccttgta 1164
|||| ||||||||||||||
Sbjct: 152 agtcaccaatacccttgta 134
>gb|BQ768123.1|BQ768123 EBro08_SQ010_C20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_C20 5', mRNA sequence
Length = 597
Score = 256 bits (129), Expect = 2e-066
Identities = 408/499 (81%), Gaps = 4/499 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| ||| || |||||||| || ||||||
Sbjct: 571 aagctggcaaagaagttgtcctggagagtgccagtaaggagaactggctttagagagtca 512
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 511 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 452
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 451 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 394
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 393 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 334
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 333 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 274
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 273 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 214
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacat 1085
|||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| |
Sbjct: 213 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgt 154
Query: 1086 tagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagc 1145
| || || ||||||||||||| |||| |||| || || || |||| || || |||||||
Sbjct: 153 tggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagc 94
Query: 1146 agtccccaatacccttgta 1164
|||| ||||||||||||||
Sbjct: 93 agtcaccaatacccttgta 75
>gb|BM816458.1|BM816458 HC111F11_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F11_T3.ab1 similar to ADP,ATP CARRIER
PROTEIN,ADP,ATP CARRIER PROTEIN 1,, mRNA sequence
Length = 868
Score = 250 bits (126), Expect = 1e-064
Identities = 459/568 (80%), Gaps = 4/568 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 611 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 552
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 551 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 492
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 491 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 432
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 431 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 372
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 371 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 312
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 311 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 252
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
|| ||||||||||| |||||||| || |||||||||||||| ||||| || ||| |
Sbjct: 251 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttgg 194
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
||||| || |||||||||| | || | || ||||| || || || || ||||| |
Sbjct: 193 atgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaaca 134
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacc 995
| ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||| |
Sbjct: 133 gcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaac 74
Query: 996 catccttgtccttcttaaagttgaacat 1023
|||||||||||||||| |||||||||||
Sbjct: 73 catccttgtccttcttgaagttgaacat 46
>gb|AV914542.1|AV914542 AV914542 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6n22 5', mRNA sequence
Length = 610
Score = 248 bits (125), Expect = 5e-064
Identities = 407/499 (81%), Gaps = 4/499 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| || || |||||||| || ||||||
Sbjct: 527 aagctggcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtca 468
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 467 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 408
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 407 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 350
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 349 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 290
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 289 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 230
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 229 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 170
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacat 1085
|||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| |
Sbjct: 169 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgt 110
Query: 1086 tagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagc 1145
| || || ||||||||||||| |||| |||| || || || |||| || || |||||||
Sbjct: 109 tggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagc 50
Query: 1146 agtccccaatacccttgta 1164
|||| ||||||||||||||
Sbjct: 49 agtcaccaatacccttgta 31
>gb|BJ464862.1|BJ464862 BJ464862 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36f20 5', mRNA sequence
Length = 697
Score = 248 bits (125), Expect = 5e-064
Identities = 407/499 (81%), Gaps = 4/499 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| || || |||||||| || ||||||
Sbjct: 614 aagctggcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtca 555
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 554 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 495
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 494 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 437
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 436 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 377
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 376 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 317
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 316 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 257
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacat 1085
|||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| |
Sbjct: 256 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgt 197
Query: 1086 tagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagc 1145
| || || ||||||||||||| |||| |||| || || || |||| || || |||||||
Sbjct: 196 tggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagc 137
Query: 1146 agtccccaatacccttgta 1164
|||| ||||||||||||||
Sbjct: 136 agtcaccaatacccttgta 118
>gb|BQ464007.1|BQ464007 HF01B12T HF Hordeum vulgare subsp. vulgare cDNA clone HF01B12
5-PRIME, mRNA sequence
Length = 684
Score = 246 bits (124), Expect = 2e-063
Identities = 406/498 (81%), Gaps = 4/498 (0%)
Strand = Plus / Minus
Query: 669 agctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcat 728
||||||| |||||||| ||||| || || ||| ||| || |||||||| || |||||||
Sbjct: 625 agctggcaaagaagttgtcctggagagtgccagtaaggagaactggctttagagagtcat 566
Query: 729 acataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatccac 788
||| |||||||| ||||| ||||| |||||||| || ||||| || || ||||||||||
Sbjct: 565 acagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatccac 506
Query: 789 ggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtcc 846
|||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || ||
Sbjct: 505 ggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggcc 448
Query: 847 attgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacg 906
|||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 447 attgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcct 388
Query: 907 ggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagc 966
|| ||||| || || || || ||||| || ||| |||||||||| || |||||||||||
Sbjct: 387 agcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagc 328
Query: 967 cagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcg 1026
|| || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 327 aaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcct 268
Query: 1027 cttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacatt 1086
|||||||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| ||
Sbjct: 267 cttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgtt 208
Query: 1087 agctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagca 1146
|| || ||||||||||||| |||| |||| || || || |||| || || ||||||||
Sbjct: 207 ggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagca 148
Query: 1147 gtccccaatacccttgta 1164
|| ||||||||||||||
Sbjct: 147 atcaccaatacccttgta 130
>gb|BM099177.2|BM099177 EBes01_SQ002_H08_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_H08 5', mRNA sequence
Length = 644
Score = 246 bits (124), Expect = 2e-063
Identities = 400/490 (81%), Gaps = 4/490 (0%)
Strand = Plus / Minus
Query: 677 aagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacatacca 736
|||||||| ||||| || || ||| ||| || |||||||| || |||||||||| |||
Sbjct: 640 aagaagttgtcctggagagtgccagtaaggagaactggctttagagagtcatacagccca 581
Query: 737 aagtaaagacctcggtacacaatgatccccacacaagatatattgaatccacggtagagg 796
||||| ||||| ||||| |||||||| || ||||| || || |||||||||||||| ||
Sbjct: 580 aagtagagaccacggtagacaatgattccaacacaggagatgttgaatccacggtaaagc 521
Query: 797 ccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtccattgaact 854
||| ||||||||| ||| | || ||||||||||| |||||||| || ||||||||||
Sbjct: 520 ccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggccattgaact 463
Query: 855 gcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagt 914
|||| ||||| || ||| | ||||| || |||||||||| | || | || ||||
Sbjct: 462 gcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcctagcatagt 403
Query: 915 ccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagatttc 974
| || || || || ||||| || ||| |||||||||| || ||||||||||| || || |
Sbjct: 402 caagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaaggttgc 343
Query: 975 cagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagt 1034
|| | |||||||||||||| ||||||||||||||||| ||||||||||| | ||||||||
Sbjct: 342 caccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttgaagt 283
Query: 1035 gatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagctgtgt 1094
||||||||| ||||||||||| ||||| || ||||||||||||||||| || || || |
Sbjct: 282 aatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgttggcagtat 223
Query: 1095 ttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtccccaa 1154
|||||||||||| |||| |||| || || || |||| || || ||||||||||| ||||
Sbjct: 222 ttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagcagtcaccaa 163
Query: 1155 tacccttgta 1164
||||||||||
Sbjct: 162 tacccttgta 153
>gb|BQ468808.1|BQ468808 HM02G12r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G12
5-PRIME, mRNA sequence
Length = 592
Score = 244 bits (123), Expect = 8e-063
Identities = 375/457 (82%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
|||||||| || |||||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 575 actggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattccaaca 516
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || |||||||||||||| || ||| ||||||||| ||| | || |||||||
Sbjct: 515 caggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtcttgc 458
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||| |||||||| || |||||||||||||| ||||| || ||| | ||||| || |
Sbjct: 457 ggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcctttgcgt 398
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
||||||||| | || | || ||||| || || || || ||||| || ||| ||||||
Sbjct: 397 cattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcac 338
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
|||| || ||||||||||| || || ||| | |||||||||||||| |||||||||||||
Sbjct: 337 cagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatccttgtcct 278
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| ||||||||||| | |||||||| ||||||||| ||||||||||| ||||| || |
Sbjct: 277 tcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttg 218
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
|||||||||||||||| || || || ||||||||||||| |||| |||| || || ||
Sbjct: 217 ggaagtaacggatgacgttggcagtatttcctctccacaatgagccaaagccttcttcct 158
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || ||||||||||| ||||||||||||||
Sbjct: 157 tgatggtgcgtccaaagcagtcaccaatacccttgta 121
>gb|BU969421.1|BU969421 HB11H20r BC Hordeum vulgare subsp. vulgare cDNA clone HB11H20
5-PRIME, mRNA sequence
Length = 503
Score = 244 bits (123), Expect = 8e-063
Identities = 375/457 (82%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 710 actggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccaca 769
|||||||| || |||||||||| |||||||| ||||| ||||| |||||||| || |||
Sbjct: 471 actggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattccaaca 412
Query: 770 caagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgc 827
|| || || |||||||||||||| || ||| ||||||||| ||| | || |||||||
Sbjct: 411 caggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtcttgc 354
Query: 828 ggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcat 887
|||| |||||||| || |||||||||||||| ||||| || ||| | ||||| || |
Sbjct: 353 ggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcctttgcgt 294
Query: 888 cattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcac 947
||||||||| | || | || ||||| || || || || ||||| || ||| ||||||
Sbjct: 293 cattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcac 234
Query: 948 cagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtcct 1007
|||| || ||||||||||| || || ||| | |||||||||||||| |||||||||||||
Sbjct: 233 cagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatccttgtcct 174
Query: 1008 tcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgg 1067
|||| ||||||||||| | |||||||| ||||||||| ||||||||||| ||||| || |
Sbjct: 173 tcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttg 114
Query: 1068 ggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctc 1127
|||||||||||||||| || || || ||||||||||||| |||| |||| || || ||
Sbjct: 113 ggaagtaacggatgacgttggcagtatttcctctccacaatgagccaaagccttcttcct 54
Query: 1128 tgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || ||||||||||| ||||||||||||||
Sbjct: 53 tgatggtgcgtccaaagcagtcaccaatacccttgta 17
>gb|BJ463089.1|BJ463089 BJ463089 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25l06 5', mRNA sequence
Length = 576
Score = 242 bits (122), Expect = 3e-062
Identities = 462/572 (80%), Gaps = 5/572 (0%)
Strand = Plus / Minus
Query: 494 ccagcacccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtcc 553
||||||||||||||||||||||||| ||||||||| || | ||||| |||||||| |||
Sbjct: 573 ccagcacccttgaagagggacttggcaccctccttagccaggatctgattgaaagcatcc 514
Query: 554 aaggagctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtg 613
|||||||| ||||||||||| ||||| || || ||||||||||| | | ||| || |||
Sbjct: 513 aaggagctcttgtacttgacagcctccccggaggtcatcatcatccttctgcggaccgtg 454
Query: 614 tcaatggggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctg 673
||||||||||| || ||||| || ||||| |||| || ||| || || ||||||
Sbjct: 453 tcaatggggtaagatgcaagacccgcaccgttggtgatcaaccaaccaagagcaaagctg 394
Query: 674 gctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 733
|| |||||||| ||||| || || ||| || || |||||||| || ||||||||||
Sbjct: 393 gcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtcatacagc 334
Query: 734 ccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatccacggtag 793
|||||||| ||||| ||||| |||||||| || ||||| || || ||||||||||||||
Sbjct: 333 ccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatccacggtaa 274
Query: 794 aggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtccattga 851
|| ||| ||||||||| ||| | || ||||||||||| |||||||| || |||||||
Sbjct: 273 agcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggccattga 216
Query: 852 actgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgt 911
||||||| ||||| || ||| | ||||| || |||||||||| | || | || |
Sbjct: 215 actgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcctagcat 156
Query: 912 agtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagat 971
|||| || || || || ||||| || ||| |||||||||| || ||||||||||| || |
Sbjct: 155 agtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaaggt 96
Query: 972 ttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttga 1031
| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | |||||
Sbjct: 95 tgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttga 36
Query: 1032 agtgat-ccttgaacgcaaagttcaatgcctg 1062
||| || ||||||| ||||||||||| |||||
Sbjct: 35 agtaatnccttgaatgcaaagttcaaagcctg 4
>gb|BJ465500.1|BJ465500 BJ465500 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29f20 5', mRNA sequence
Length = 588
Score = 242 bits (122), Expect = 3e-062
Identities = 462/572 (80%), Gaps = 5/572 (0%)
Strand = Plus / Minus
Query: 494 ccagcacccttgaagagggacttggtaccctcctttgcgacaatctgcttgaaagcgtcc 553
||||||||||||||||||||||||| ||||||||| || | ||||| |||||||| |||
Sbjct: 585 ccagcacccttgaagagggacttggcaccctccttagccaggatctgattgaaagcatcc 526
Query: 554 aaggagctgttgtacttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtg 613
|||||||| ||||||||||| ||||| || || ||||||||||| | | ||| || |||
Sbjct: 525 aaggagctcttgtacttgacagcctcgccggaggtcatcatcatccttctgcggaccgtg 466
Query: 614 tcaatggggtaggaggcaaggccagcaccaatggttataccccacccgagcaagaagctg 673
||||||||||| || ||||| || ||||| |||| || ||| || || ||||||
Sbjct: 465 tcaatggggtaagatgcaagacccgcaccgttggtgatcaaccaaccaagagcaaagctg 406
Query: 674 gctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtcatacata 733
|| |||||||| ||||| || || ||| || || |||||||| || ||||||||||
Sbjct: 405 gcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtcatacagc 346
Query: 734 ccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatccacggtag 793
|||||||| ||||| ||||| |||||||| || ||||| || || ||||||||||||||
Sbjct: 345 ccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatccacggtaa 286
Query: 794 aggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtccattga 851
|| ||| ||||||||| ||| | || ||||||||||| |||||||| || |||||||
Sbjct: 285 agcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggccattga 228
Query: 852 actgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtacgggcgt 911
||||||| ||||| || ||| | ||||| || |||||||||| | || | || |
Sbjct: 227 actgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcctagcat 168
Query: 912 agtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccagat 971
|||| || || || || ||||| || ||| |||||||||| || ||||||||||| || |
Sbjct: 167 agtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaaggt 108
Query: 972 ttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttga 1031
| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | |||||
Sbjct: 107 tgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttga 48
Query: 1032 agtgat-ccttgaacgcaaagttcaatgcctg 1062
||| || ||||||| ||||||||||| |||||
Sbjct: 47 agtaatnccttgaatgcaaagttcaaagcctg 16
>gb|BQ465238.1|BQ465238 HU03A12r HU Hordeum vulgare subsp. vulgare cDNA clone HU03A12
5-PRIME, mRNA sequence
Length = 583
Score = 240 bits (121), Expect = 1e-061
Identities = 466/579 (80%), Gaps = 4/579 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 581 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 522
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 521 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 462
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 461 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 402
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 401 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 342
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 341 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 282
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||| ||||| ||| |
Sbjct: 281 atgattccaacacaggagatgttgaatccacggtaaagcccagcaatcccatctgacttg 222
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
|| ||||||||||| |||||||| || ||||||||||||| ||||| || ||| |
Sbjct: 221 --agagtcttgcggtagacatcaacaaggacattgaactgcctttcacctccacccttgg 164
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
||||| || |||||||||| | || | || ||||| || || || || ||||| |
Sbjct: 163 atgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaaca 104
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacc 995
| ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||| |
Sbjct: 103 gcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaac 44
Query: 996 catccttgtccttcttaaagttgaacatgcgcttgaagt 1034
|||||||||||||||| ||||||||||| | ||||||||
Sbjct: 43 catccttgtccttcttgaagttgaacatcctcttgaagt 5
>gb|BJ462824.1|BJ462824 BJ462824 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24j06 5', mRNA sequence
Length = 645
Score = 236 bits (119), Expect = 2e-060
Identities = 365/445 (82%), Gaps = 4/445 (0%)
Strand = Plus / Minus
Query: 722 gagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattg 781
|||||||||| |||||||| ||||| ||||| |||||||| || ||||| || || |||
Sbjct: 640 gagtcatacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttg 581
Query: 782 aatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaa 839
||||||||||| || ||| ||||||||| ||| | || ||||||||||| |||||||
Sbjct: 580 aatccacggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaa 523
Query: 840 cgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaac 899
| || |||||||||||||| ||||| || ||| | ||||| || |||||||||| |
Sbjct: 522 caaggccattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagcc 463
Query: 900 gcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccac 959
|| | || ||||| || || || || ||||| || ||| |||||||||| || ||||
Sbjct: 462 ttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccac 403
Query: 960 cagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttga 1019
||||||| || || ||| | |||||||||||||| ||||||||||||||||| |||||||
Sbjct: 402 cagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttga 343
Query: 1020 acatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacgga 1079
|||| | |||||||| ||||||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 342 acatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacgga 283
Query: 1080 tgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggc 1139
|||| || || || ||||||||||||| |||| |||| || || || |||| || || |
Sbjct: 282 tgacgttggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtc 223
Query: 1140 caaagcagtccccaatacccttgta 1164
|||||||||| ||||||||||||||
Sbjct: 222 caaagcagtcaccaatacccttgta 198
>gb|BQ472898.1|BQ472898 HB01C16r BC Hordeum vulgare subsp. vulgare cDNA clone HB01C16
5-PRIME, mRNA sequence
Length = 626
Score = 236 bits (119), Expect = 2e-060
Identities = 365/445 (82%), Gaps = 4/445 (0%)
Strand = Plus / Minus
Query: 722 gagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattg 781
|||||||||| |||||||| ||||| ||||| |||||||| || ||||| || || |||
Sbjct: 625 gagtcatacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttg 566
Query: 782 aatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaa 839
||||||||||| || ||| ||||||||| ||| | || ||||||||||| |||||||
Sbjct: 565 aatccacggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaa 508
Query: 840 cgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaac 899
| || |||||||||||||| ||||| || ||| | ||||| || |||||||||| |
Sbjct: 507 caaggccattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagcc 448
Query: 900 gcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccac 959
|| | || ||||| || || || || ||||| || ||| |||||||||| || ||||
Sbjct: 447 ttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccac 388
Query: 960 cagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttga 1019
||||||| || || ||| | |||||||||||||| ||||||||||||||||| |||||||
Sbjct: 387 cagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttga 328
Query: 1020 acatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacgga 1079
|||| | |||||||| ||||||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 327 acatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacgga 268
Query: 1080 tgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggc 1139
|||| || || || ||||||||||||| |||| |||| || || || |||| || || |
Sbjct: 267 tgacgttggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtc 208
Query: 1140 caaagcagtccccaatacccttgta 1164
|||||||||| ||||||||||||||
Sbjct: 207 caaagcagtcaccaatacccttgta 183
>gb|BU988739.1|BU988739 HF18I22r HF Hordeum vulgare subsp. vulgare cDNA clone HF18I22
5-PRIME, mRNA sequence
Length = 574
Score = 236 bits (119), Expect = 2e-060
Identities = 365/445 (82%), Gaps = 4/445 (0%)
Strand = Plus / Minus
Query: 722 gagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattg 781
|||||||||| |||||||| ||||| ||||| |||||||| || ||||| || || |||
Sbjct: 572 gagtcatacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttg 513
Query: 782 aatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaa 839
||||||||||| || ||| ||||||||| ||| | || ||||||||||| |||||||
Sbjct: 512 aatccacggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaa 455
Query: 840 cgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaac 899
| || |||||||||||||| ||||| || ||| | ||||| || |||||||||| |
Sbjct: 454 caaggccattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagcc 395
Query: 900 gcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccac 959
|| | || ||||| || || || || ||||| || ||| |||||||||| || ||||
Sbjct: 394 ttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccac 335
Query: 960 cagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttga 1019
||||||| || || ||| | |||||||||||||| ||||||||||||||||| |||||||
Sbjct: 334 cagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttga 275
Query: 1020 acatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacgga 1079
|||| | |||||||| ||||||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 274 acatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacgga 215
Query: 1080 tgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggc 1139
|||| || || || ||||||||||||| |||| |||| || || || |||| || || |
Sbjct: 214 tgacgttggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtc 155
Query: 1140 caaagcagtccccaatacccttgta 1164
|||||||||| ||||||||||||||
Sbjct: 154 caaagcagtcaccaatacccttgta 130
>gb|BU974098.1|BU974098 HB26O06r BC Hordeum vulgare subsp. vulgare cDNA clone HB26O06
5-PRIME, mRNA sequence
Length = 564
Score = 234 bits (118), Expect = 7e-060
Identities = 448/556 (80%), Gaps = 4/556 (0%)
Strand = Plus / Minus
Query: 509 agggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtac 568
|||||||||| ||||||||| || | ||||| |||||||| ||||||||||| ||||||
Sbjct: 564 agggacttggcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtac 505
Query: 569 ttgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggag 628
||||| ||||| || || ||||||||||| | | ||| || |||||||||||||| ||
Sbjct: 504 ttgacagcctccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagat 445
Query: 629 gcaaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcc 688
||||| || ||||| |||| || ||| || || |||||||| |||||||| |||
Sbjct: 444 gcaagacccgcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcc 385
Query: 689 tgcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacct 748
|| || || ||| ||| || |||||||| || |||||||||| |||||||| |||||
Sbjct: 384 tggagagtgccagtaaggagaactggctttagagagtcatacagcccaaagtagagacca 325
Query: 749 cggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaatacca 808
||||| |||||||| || ||||| || || |||||||||||||| || ||| |||||||
Sbjct: 324 cggtagacaatgattccaacacaggagatgttgaatccacggtaaagcccagcaatacca 265
Query: 809 tc--actggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccac 866
|| ||| | || ||||||||||| |||||||| || |||||||||||||| ||||| |
Sbjct: 264 tctgacttg--agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctc 207
Query: 867 ccttctttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaataga 926
| ||| | ||||| || |||||||||| | || | || ||||| || || || |
Sbjct: 206 cacccttggatgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtaca 147
Query: 927 caaagaatagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccact 986
| ||||| || ||| |||||||||| || ||||||||||| || || ||| | |||||||
Sbjct: 146 cgaagaacagcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccact 87
Query: 987 tccagtacccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacg 1046
||||||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||| |
Sbjct: 86 tccagtaaccatccttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatg 27
Query: 1047 caaagttcaatgcctg 1062
|||||||||| |||||
Sbjct: 26 caaagttcaaagcctg 11
>gb|BG368221.1|BG368221 HVSMEi0016L19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0016L19f, mRNA sequence
Length = 524
Score = 224 bits (113), Expect = 7e-057
Identities = 369/453 (81%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 391 ttagccaccaccagacccgtacttctt-gccgaagacaaccacctggagcttgtcgtacc 449
|||||||||||| || || |||||||| ||| ||||| ||||||||||||||||| ||
Sbjct: 468 ttagccaccaccggatccatacttctttgccaaagacgaccacctggagcttgtcataga 409
Query: 450 cagcaaggacaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaaga 509
| || |||||||||||||| || || || || |||||||| |||||||||||||||||||
Sbjct: 408 cggcgaggacaccagcacccgcaacggcacgaaggatgttggcgccagcacccttgaaga 349
Query: 510 gggacttggtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtact 569
||||||||| |||||| | ||||| || | ||||||||| |||| |||| | || ||||
Sbjct: 348 gggacttggcaccctcttcggcgacgattttcttgaaagcatccatggagttcttatact 289
Query: 570 tgacggcctcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggagg 629
| |||| ||||||||||||||||||||| || ||||| || || || || || || ||||
Sbjct: 288 tcacggactcaccagatgtcatcatcatacggcggcgcacggtatcgataggatacgagg 229
Query: 630 caaggccagcaccaatggttataccccacccgagcaagaagctggctaagaagttatcct 689
| || |||||||| || |||| ||||| || |||||||| ||||| | ||||||||||
Sbjct: 228 cgagcccagcacccatcgttacgccccagccaagcaagaaactggcaagcaagttatcct 169
Query: 690 gcagggtaccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctc 749
|| | ||| || |||| | | ||||| |||||||| ||||| || |||||||||||||
Sbjct: 168 caagagaaccgacgagaaccgcgggcttgagggagtcgtacattccgaagtaaagacctc 109
Query: 750 ggtacacaatgatccccacacaagatatattgaatccacggtagaggccacgaataccat 809
| || || ||||| ||||||||||| | ||||| |||||||| | ||| || | ||| |
Sbjct: 108 gataaacgatgatgcccacacaagagacgttgaacccacggtacaagccgcggacaccgt 49
Query: 810 cactggcaagggtcttgcggtaaacatcaacga 842
| || |||||||||||||| || ||||| ||||
Sbjct: 48 cgctagcaagggtcttgcgatagacatccacga 16
>gb|AV917415.1|AV917415 AV917415 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18n03 5', mRNA sequence
Length = 642
Score = 222 bits (112), Expect = 3e-056
Identities = 365/446 (81%), Gaps = 5/446 (1%)
Strand = Plus / Minus
Query: 722 gagtcatacataccaaagtaaagacctcgg-tacacaatgatccccacacaagatatatt 780
|||||||||| |||||||| ||||| ||| || |||||||| || ||||| || || ||
Sbjct: 639 gagtcatacagcccaaagtagagaccacgggtagacaatgattccaacacaggagatgtt 580
Query: 781 gaatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatca 838
|||||||||||| || ||| ||||||||| ||| | || ||||||||||| ||||||
Sbjct: 579 gaatccacggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatca 522
Query: 839 acgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaa 898
|| || |||||||||||||| ||||| || ||| | ||||| || ||||||||||
Sbjct: 521 acaaggccattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagc 462
Query: 899 cgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctcca 958
| || | || ||||| || || || || ||||| || ||| |||||||||| || |||
Sbjct: 461 cttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcacca 402
Query: 959 ccagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttg 1018
|||||||| || || ||| | |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 401 ccagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttg 342
Query: 1019 aacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacgg 1078
||||| | |||||||| ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 341 aacatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacgg 282
Query: 1079 atgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccgg 1138
||||| || || || ||||||||||||| |||| |||| || || || |||| || ||
Sbjct: 281 atgacgttggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgt 222
Query: 1139 ccaaagcagtccccaatacccttgta 1164
||||||||||| ||||||||||||||
Sbjct: 221 ccaaagcagtcaccaatacccttgta 196
>gb|BJ453090.1|BJ453090 BJ453090 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak41k09 5', mRNA sequence
Length = 600
Score = 222 bits (112), Expect = 3e-056
Identities = 481/602 (79%), Gaps = 4/602 (0%)
Strand = Plus / Minus
Query: 407 ccgtacttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagca 466
||||||||||||||||||| | | |||||||| ||||| || | || |||||||||
Sbjct: 600 ccgtacttcttgccgaagaagaggatctggagctgatcgtagccggagagcacaccagca 541
Query: 467 ccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcc 526
||||| | || ||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 540 ccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttggcaccctcc 481
Query: 527 tttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagat 586
|| || | ||||| |||||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct: 480 ttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcctccccggag 421
Query: 587 gtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatg 646
||||||||||| | | ||| || |||||||||||||| || ||||| || ||||| ||
Sbjct: 420 gtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagacccgcaccgttg 361
Query: 647 gttataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaacaaga 706
|| || ||| || || |||||||| |||||||| ||||| || || ||| ||
Sbjct: 360 gtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtgccagtgagg 301
Query: 707 agcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatcccc 766
|| |||||||| || |||||||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 300 agaactggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattcca 241
Query: 767 acacaagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtct 824
||||| || || |||||||||||||| || ||| ||||||||| ||| | || ||||
Sbjct: 240 acacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtct 183
Query: 825 tgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttgg 884
||||||| |||||||| || |||||||||||||| ||||| || ||| | ||||| |
Sbjct: 182 tgcggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcctttg 123
Query: 885 catcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaag 944
| |||||||||| | || | || ||||| || || || || ||||| || ||| |||
Sbjct: 122 cgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgaggaag 63
Query: 945 caccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgt 1004
||||||| || ||||||||||| || || ||| | |||||||||||||| ||||||||||
Sbjct: 62 caccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatccttgt 3
Query: 1005 cc 1006
||
Sbjct: 2 cc 1
>gb|AV916568.1|AV916568 AV916568 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17m15 5', mRNA sequence
Length = 570
Score = 214 bits (108), Expect = 7e-054
Identities = 364/446 (81%), Gaps = 5/446 (1%)
Strand = Plus / Minus
Query: 722 gagtcatacataccaaagtaaagacctcgg-tacacaatgatccccacacaagatatatt 780
|||||||||| |||||||| ||||| ||| || |||||||| || ||||| || || ||
Sbjct: 565 gagtcatacagcccaaagtagagaccacgggtagacaatgattccaacacaggagatgtt 506
Query: 781 gaatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatca 838
|||||||||||| || ||| ||||| ||| ||| | || ||||||||||| ||||||
Sbjct: 505 gaatccacggtaaagcccagcaatactatctgacttg--agagtcttgcggtagacatca 448
Query: 839 acgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaa 898
|| || |||||||||||||| ||||| || ||| | ||||| || ||||||||||
Sbjct: 447 acaaggccattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagc 388
Query: 899 cgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctcca 958
| || | || ||||| || || || || ||||| || ||| |||||||||| || |||
Sbjct: 387 cttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcacca 328
Query: 959 ccagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttg 1018
|||||||| || || ||| | |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 327 ccagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttg 268
Query: 1019 aacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacgg 1078
||||| | |||||||| ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 267 aacatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacgg 208
Query: 1079 atgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctgattgtccgg 1138
||||| || || || ||||||||||||| |||| |||| || || || |||| || ||
Sbjct: 207 atgacgttggcagtatttcctctccacaatgagccaaagccttcttccttgatggtgcgt 148
Query: 1139 ccaaagcagtccccaatacccttgta 1164
||||||||||| ||||||||||||||
Sbjct: 147 ccaaagcagtcaccaatacccttgta 122
>gb|AV913501.1|AV913501 AV913501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22e19 5', mRNA sequence
Length = 419
Score = 212 bits (107), Expect = 3e-053
Identities = 326/397 (82%), Gaps = 4/397 (1%)
Strand = Plus / Minus
Query: 722 gagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattg 781
|||||||||| |||||||| ||||| ||||| |||||||| || ||||| || || |||
Sbjct: 413 gagtcatacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttg 354
Query: 782 aatccacggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaa 839
||||||||||| || ||| ||||||||| ||| | || ||||||||||| |||||||
Sbjct: 353 aatccacggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaa 296
Query: 840 cgagtccattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaac 899
| || |||||||||||||| ||||| || ||| | ||||| || |||||||||| |
Sbjct: 295 caaggccattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagcc 236
Query: 900 gcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccac 959
|| | || ||||| || || || || ||||| || ||| |||||||||| || ||||
Sbjct: 235 ttgtcctagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccac 176
Query: 960 cagaagccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttga 1019
||||||| || || ||| | |||||||||||||| ||||||||||||||||| |||||||
Sbjct: 175 cagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttga 116
Query: 1020 acatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacgga 1079
|||| | |||||||| ||||||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 115 acatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacgga 56
Query: 1080 tgacattagctgtgtttcctctccacagtgagacaaa 1116
|||| || || || ||||||||||||| |||| ||||
Sbjct: 55 tgacgttggcagtatttcctctccacaatgagccaaa 19
>gb|AV915957.1|AV915957 AV915957 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16n07 5', mRNA sequence
Length = 657
Score = 210 bits (106), Expect = 1e-052
Identities = 337/412 (81%), Gaps = 4/412 (0%)
Strand = Plus / Minus
Query: 755 acaatgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--ac 812
|||||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||
Sbjct: 656 acaatgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgac 597
Query: 813 tggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttct 872
| | || ||||||||||| |||||||| || |||||||||||||| ||||| || ||
Sbjct: 596 ttg--agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccaccct 539
Query: 873 ttgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaaga 932
| | ||||| || |||||||||| | || | || ||||| || || || || ||||
Sbjct: 538 tggatgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaaga 479
Query: 933 atagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagt 992
| || ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||
Sbjct: 478 acagcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagt 419
Query: 993 acccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagt 1052
| ||||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||
Sbjct: 418 aaccatccttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagt 359
Query: 1053 tcaatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgaga 1112
|||| ||||| || ||||||||||||||||| || || || ||||||||||||| ||||
Sbjct: 358 tcaaagcctgagttgggaagtaacggatgacgttggcagtatttcctctccacaatgagc 299
Query: 1113 caaaaccctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
|||| || || || |||| || || ||||||||||| ||||||||||||||
Sbjct: 298 caaagccttcttccttgatggtgcgtccaaagcagtcaccaatacccttgta 247
>gb|AV916184.1|AV916184 AV916184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12a05 5', mRNA sequence
Length = 494
Score = 208 bits (105), Expect = 4e-052
Identities = 336/411 (81%), Gaps = 4/411 (0%)
Strand = Plus / Minus
Query: 756 caatgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--act 813
||||||| || ||||| || || |||||||||||||| || ||| ||||||||| |||
Sbjct: 494 caatgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgact 435
Query: 814 ggcaagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctt 873
| || ||||||||||| |||||||| || |||||||||||||| ||||| || |||
Sbjct: 434 tg--agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccaccctt 377
Query: 874 tgcagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaa 933
| ||||| || |||||||||| | || | || ||||| || || || || |||||
Sbjct: 376 ggatgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaa 317
Query: 934 tagagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagta 993
|| ||| |||||||||| || ||||||||||| || || ||| | ||||||||||||||
Sbjct: 316 cagcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagta 257
Query: 994 cccatccttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagtt 1053
||||||||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||
Sbjct: 256 accatccttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagtt 197
Query: 1054 caatgcctgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagac 1113
||| ||||| || ||||||||||||||||| || || || ||||||||||||| |||| |
Sbjct: 196 caaagcctgagttgggaagtaacggatgacgttggcagtatttcctctccacaatgagcc 137
Query: 1114 aaaaccctcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
||| || || || |||| || || ||||||||||| ||||||||||||||
Sbjct: 136 aaagccttcttccttgatggtgcgtccaaagcagtcaccaatacccttgta 86
>gb|BM372627.2|BM372627 EBpi05_SQ003_H21_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_H21 5', mRNA sequence
Length = 561
Score = 208 bits (105), Expect = 4e-052
Identities = 441/551 (80%), Gaps = 4/551 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || |||||||| |||||||||||||||
Sbjct: 549 acaccagcaccagcaatggcacggaggatgttagcaccagcacctttgaagagggacttg 490
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| |||||| || || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 489 gcaccctctttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 430
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 429 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 370
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 369 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 310
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 309 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 250
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 249 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 190
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
|| ||||||||||| |||||||| || |||||||||||||| ||||| || ||| |
Sbjct: 189 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttgg 132
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
||||| || |||||||||| | || | || ||||| || || || || ||||| |
Sbjct: 131 atgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaaca 72
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacc 995
| ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||| |
Sbjct: 71 gcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaac 12
Query: 996 catccttgtcc 1006
|||||||||||
Sbjct: 11 catccttgtcc 1
>gb|AL504563.1|AL504563 AL504563 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05K16V 5', mRNA sequence
Length = 699
Score = 206 bits (104), Expect = 2e-051
Identities = 284/344 (82%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcc 880
||||||||||| |||||||| || |||||||||||||| ||||| || ||| | |||
Sbjct: 509 gtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcc 450
Query: 881 ttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagag 940
|| || |||||||||| | || | || ||||| || || || || ||||| || |||
Sbjct: 449 tttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgag 390
Query: 941 caagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcc 1000
|||||||||| || ||||||||||| || || ||| | |||||||||||||| ||||||
Sbjct: 389 gaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatcc 330
Query: 1001 ttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcc 1060
||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||||| |||
Sbjct: 329 ttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcc 270
Query: 1061 tgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccc 1120
|| || ||||||||||||||||| || || || ||||||||||||| |||| |||| ||
Sbjct: 269 tgagttgggaagtaacggatgacgttggcagtatttcctctccacaatgagccaaagcct 210
Query: 1121 tcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
|| || |||| || || ||||||||||| ||||||||||||||
Sbjct: 209 tcttccttgatggtgcgtccaaagcagtcaccaatacccttgta 166
>gb|BG368067.2|BG368067 HVSMEi0015I13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0015I13f, mRNA sequence
Length = 865
Score = 206 bits (104), Expect = 2e-051
Identities = 369/454 (81%), Gaps = 5/454 (1%)
Strand = Plus / Minus
Query: 713 ggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccacacaa 772
||||| || |||||||||| |||||||| ||||| ||||| || |||| || |||||
Sbjct: 522 ggctttagagagtcatacagcccaaagtagagaccacggtagcca-tgattccaacacag 464
Query: 773 gatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttgcggt 830
|| || |||||||||||||| || ||| ||||||||| ||| | || ||||||||||
Sbjct: 463 gagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtcttgcggt 406
Query: 831 aaacatcaacgagtccattgaactgcctctcaccacccttctttgcagccttggcatcat 890
| |||||||| || |||||||||||||| ||||| || ||| | ||||| || ||||
Sbjct: 405 agacatcaacaaggccattgaactgcctttcacctccacccttggatgcctttgcgtcat 346
Query: 891 tggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagagcaagcaccag 950
|||||| | || | || |||||||| || || || ||||| || ||| |||||||||
Sbjct: 345 tggccagccttgtcctagcatagtccagggagtacacgaagaacagcgaggaagcaccag 286
Query: 951 cagctccaccagaagccagatttccagcaaaccacttccagtacccatccttgtccttct 1010
| || ||||||||||| || || ||| | |||||||||||||| ||||||||||||||||
Sbjct: 285 cggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatccttgtccttct 226
Query: 1011 taaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcctgtgtgggga 1070
| ||||||||||| | |||||||| ||||||||| ||||||||||| ||||| || ||||
Sbjct: 225 tgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcctgagttggga 166
Query: 1071 agtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccctcatctctga 1130
|| ||||||||| || || || ||||||||||||| |||| |||| || || || |||
Sbjct: 165 agccacggatgacgttggcagtatttcctctccacaatgagccaaagccttcttccttga 106
Query: 1131 ttgtccggccaaagcagtccccaatacccttgta 1164
| || || ||||||||||| ||||||||||||||
Sbjct: 105 tggtgcgtccaaagcagtcaccaatacccttgta 72
>gb|AV916476.1|AV916476 AV916476 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17f23 5', mRNA sequence
Length = 514
Score = 206 bits (104), Expect = 2e-051
Identities = 341/418 (81%), Gaps = 4/418 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| || || |||||||| || ||||||
Sbjct: 452 aagctggcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtca 393
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 392 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 333
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 332 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 275
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 274 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 215
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 214 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 155
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 154 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 95
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgac 1083
|||||||| ||||||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct: 94 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgac 37
>gb|BJ463221.1|BJ463221 BJ463221 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26e22 5', mRNA sequence
Length = 552
Score = 206 bits (104), Expect = 2e-051
Identities = 284/344 (82%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcc 880
||||||||||| |||||||| || |||||||||||||| ||||| || ||| | |||
Sbjct: 488 gtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcc 429
Query: 881 ttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagag 940
|| || |||||||||| | || | || ||||| || || || || ||||| || |||
Sbjct: 428 tttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgag 369
Query: 941 caagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcc 1000
|||||||||| || ||||||||||| || || ||| | |||||||||||||| ||||||
Sbjct: 368 gaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatcc 309
Query: 1001 ttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcc 1060
||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||||| |||
Sbjct: 308 ttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcc 249
Query: 1061 tgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccc 1120
|| || ||||||||||||||||| || || || ||||||||||||| |||| |||| ||
Sbjct: 248 tgagttgggaagtaacggatgacgttggcagtatttcctctccacaatgagccaaagcct 189
Query: 1121 tcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
|| || |||| || || ||||||||||| ||||||||||||||
Sbjct: 188 tcttccttgatggtgcgtccaaagcagtcaccaatacccttgta 145
>gb|BJ463813.1|BJ463813 BJ463813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30j19 5', mRNA sequence
Length = 520
Score = 206 bits (104), Expect = 2e-051
Identities = 341/418 (81%), Gaps = 4/418 (0%)
Strand = Plus / Minus
Query: 668 aagctggctaagaagttatcctgcagggtaccaacaagaagcactggcttcagggagtca 727
|||||||| |||||||| ||||| || || ||| || || |||||||| || ||||||
Sbjct: 417 aagctggcaaagaagttgtcctggagagtgccagtgaggagaactggctttagagagtca 358
Query: 728 tacataccaaagtaaagacctcggtacacaatgatccccacacaagatatattgaatcca 787
|||| |||||||| ||||| ||||| |||||||| || ||||| || || |||||||||
Sbjct: 357 tacagcccaaagtagagaccacggtagacaatgattccaacacaggagatgttgaatcca 298
Query: 788 cggtagaggccacgaataccatc--actggcaagggtcttgcggtaaacatcaacgagtc 845
||||| || ||| ||||||||| ||| | || ||||||||||| |||||||| || |
Sbjct: 297 cggtaaagcccagcaataccatctgacttg--agagtcttgcggtagacatcaacaaggc 240
Query: 846 cattgaactgcctctcaccacccttctttgcagccttggcatcattggccaaacgcgtac 905
||||||||||||| ||||| || ||| | ||||| || |||||||||| | || |
Sbjct: 239 cattgaactgcctttcacctccacccttggatgcctttgcgtcattggccagccttgtcc 180
Query: 906 gggcgtagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaag 965
|| ||||| || || || || ||||| || ||| |||||||||| || ||||||||||
Sbjct: 179 tagcatagtcaagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaag 120
Query: 966 ccagatttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgc 1025
| || || ||| | |||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 119 caaggttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcc 60
Query: 1026 gcttgaagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgac 1083
|||||||| ||||||||| ||||||||||| ||||| || |||||||||||||||||
Sbjct: 59 tcttgaagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgac 2
>gb|BQ472888.1|BQ472888 HB01C18r BC Hordeum vulgare subsp. vulgare cDNA clone HB01C18
5-PRIME, mRNA sequence
Length = 575
Score = 206 bits (104), Expect = 2e-051
Identities = 284/344 (82%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcc 880
||||||||||| |||||||| || |||||||||||||| ||||| || ||| | |||
Sbjct: 526 gtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcc 467
Query: 881 ttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagag 940
|| || |||||||||| | || | || ||||| || || || || ||||| || |||
Sbjct: 466 tttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgag 407
Query: 941 caagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcc 1000
|||||||||| || ||||||||||| || || ||| | |||||||||||||| ||||||
Sbjct: 406 gaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatcc 347
Query: 1001 ttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcc 1060
||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||||| |||
Sbjct: 346 ttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcc 287
Query: 1061 tgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccc 1120
|| || ||||||||||||||||| || || || ||||||||||||| |||| |||| ||
Sbjct: 286 tgagttgggaagtaacggatgacgttggcagtatttcctctccacaatgagccaaagcct 227
Query: 1121 tcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
|| || |||| || || ||||||||||| ||||||||||||||
Sbjct: 226 tcttccttgatggtgcgtccaaagcagtcaccaatacccttgta 183
>gb|BQ135359.1|BQ135359 LP10179 Lemma/palea-enriched cDNA library from elongation stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 1-179
similar to T.turgidum mRNA for ADP/ATP carrier,
Accession No. X80023.1, mRNA sequence
Length = 517
Score = 206 bits (104), Expect = 2e-051
Identities = 371/458 (81%), Gaps = 4/458 (0%)
Strand = Plus / Minus
Query: 409 gtacttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagcacc 468
||||||||||||||||| | | |||||||| ||||| || | || |||||||||||
Sbjct: 517 gtacttcttgccgaagaagaggatctggagctgatcgtagccggagagcacaccagcacc 458
Query: 469 agctacagcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcctt 528
||| | || ||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 457 agcaatggcacggaggatgttagcaccagcacccttgaagagggacttggcaccctcctt 398
Query: 529 tgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagatgt 588
|| | ||||| |||||||| ||||||||||| ||||||||||| ||||| || || ||
Sbjct: 397 agccaggatctgattgaaagcatccaaggagctcttgtacttgacagcctccccggaggt 338
Query: 589 catcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatggt 648
||||||||| | | ||| || |||||||||||||| || ||||| || ||||| ||||
Sbjct: 337 catcatcatccttctgcggaccgtgtcaatggggtaagatgcaagacccgcaccgttggt 278
Query: 649 tataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaacaagaag 708
|| ||| || || |||||||| |||||||| ||||| || || ||| ||| ||
Sbjct: 277 gatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtgccagtaaggag 218
Query: 709 cactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatccccac 768
|||||||| || |||||||||| |||||||| ||||| ||||| |||||||| || ||
Sbjct: 217 aactggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattccaac 158
Query: 769 acaagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtcttg 826
||| || || |||||||||||||| || ||| ||||||||| ||| | || ||||||
Sbjct: 157 acaggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtcttg 100
Query: 827 cggtaaacatcaacgagtccattgaactgcctctcacc 864
||||| |||||||| || |||||||||||||| |||||
Sbjct: 99 cggtagacatcaacaaggccattgaactgcctttcacc 62
>gb|CA024129.1|CA024129 HZ48H03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48H03
5-PRIME, mRNA sequence
Length = 438
Score = 206 bits (104), Expect = 2e-051
Identities = 284/344 (82%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttgcagcc 880
||||||||||| |||||||| || |||||||||||||| ||||| || ||| | |||
Sbjct: 422 gtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttggatgcc 363
Query: 881 ttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaatagagag 940
|| || |||||||||| | || | || ||||| || || || || ||||| || |||
Sbjct: 362 tttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaacagcgag 303
Query: 941 caagcaccagcagctccaccagaagccagatttccagcaaaccacttccagtacccatcc 1000
|||||||||| || ||||||||||| || || ||| | |||||||||||||| ||||||
Sbjct: 302 gaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagtaaccatcc 243
Query: 1001 ttgtccttcttaaagttgaacatgcgcttgaagtgatccttgaacgcaaagttcaatgcc 1060
||||||||||| ||||||||||| | |||||||| ||||||||| ||||||||||| |||
Sbjct: 242 ttgtccttcttgaagttgaacatcctcttgaagtaatccttgaatgcaaagttcaaagcc 183
Query: 1061 tgtgtggggaagtaacggatgacattagctgtgtttcctctccacagtgagacaaaaccc 1120
|| || ||||||||||||||||| || || || ||||||||||||| |||| |||| ||
Sbjct: 182 tgagttgggaagtaacggatgacgttggcagtatttcctctccacaatgagccaaagcct 123
Query: 1121 tcatctctgattgtccggccaaagcagtccccaatacccttgta 1164
|| || |||| || || ||||||||||| ||||||||||||||
Sbjct: 122 tcttccttgatggtgcgtccaaagcagtcaccaatacccttgta 79
>gb|BQ470416.1|BQ470416 HX02O18r HX Hordeum vulgare subsp. vulgare cDNA clone HX02O18
5-PRIME, mRNA sequence
Length = 640
Score = 204 bits (103), Expect = 6e-051
Identities = 334/409 (81%), Gaps = 4/409 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 531 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 472
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 471 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 412
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 411 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 352
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 351 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 292
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 291 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 232
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 231 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 172
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcacc 864
|| ||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 171 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacc 125
>gb|BQ472861.1|BQ472861 HB01E09r BC Hordeum vulgare subsp. vulgare cDNA clone HB01E09
5-PRIME, mRNA sequence
Length = 614
Score = 204 bits (103), Expect = 6e-051
Identities = 334/409 (81%), Gaps = 4/409 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 528 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 469
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 468 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 409
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 408 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 349
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 348 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 289
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 288 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 229
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 228 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 169
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcacc 864
|| ||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 168 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacc 122
>gb|BU970733.1|BU970733 HB15I10r BC Hordeum vulgare subsp. vulgare cDNA clone HB15I10
5-PRIME, mRNA sequence
Length = 529
Score = 204 bits (103), Expect = 6e-051
Identities = 334/409 (81%), Gaps = 4/409 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 504 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 445
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 444 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 385
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 384 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 325
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 324 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 265
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 264 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 205
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 204 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 145
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcacc 864
|| ||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 144 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacc 98
>gb|BU976026.1|BU976026 HA03A05r HA Hordeum vulgare subsp. vulgare cDNA clone HA03A05
5-PRIME, mRNA sequence
Length = 584
Score = 204 bits (103), Expect = 6e-051
Identities = 430/537 (80%), Gaps = 4/537 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 545 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 486
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 485 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 426
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 425 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 366
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 365 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 306
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 305 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 246
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 245 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 186
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcaccacccttctttg 875
|| ||||||||||| |||||||| || |||||||||||||| ||||| || ||| |
Sbjct: 185 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacctccacccttgg 128
Query: 876 cagccttggcatcattggccaaacgcgtacgggcgtagtccagagaatagacaaagaata 935
||||| || |||||||||| | || | || ||||| || || || || ||||| |
Sbjct: 127 atgcctttgcgtcattggccagccttgtcctagcatagtcaagggagtacacgaagaaca 68
Query: 936 gagagcaagcaccagcagctccaccagaagccagatttccagcaaaccacttccagt 992
| ||| |||||||||| || ||||||||||| || || ||| | |||||||||||||
Sbjct: 67 gcgaggaagcaccagcggcaccaccagaagcaaggttgccaccgaaccacttccagt 11
>gb|BU984404.1|BU984404 HF03N09r HF Hordeum vulgare subsp. vulgare cDNA clone HF03N09
5-PRIME, mRNA sequence
Length = 525
Score = 204 bits (103), Expect = 6e-051
Identities = 334/409 (81%), Gaps = 4/409 (0%)
Strand = Plus / Minus
Query: 458 acaccagcaccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttg 517
|||||||||||||| | || ||||||||||| || ||||||||||||||||||||||||
Sbjct: 500 acaccagcaccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttg 441
Query: 518 gtaccctcctttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcc 577
| ||||||||| || | ||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 440 gcaccctccttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcc 381
Query: 578 tcaccagatgtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggcca 637
|| || || ||||||||||| | | ||| || |||||||||||||| || ||||| ||
Sbjct: 380 tccccggaggtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagaccc 321
Query: 638 gcaccaatggttataccccacccgagcaagaagctggctaagaagttatcctgcagggta 697
||||| |||| || ||| || || |||||||| |||||||| ||||| || ||
Sbjct: 320 gcaccgttggtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtg 261
Query: 698 ccaacaagaagcactggcttcagggagtcatacataccaaagtaaagacctcggtacaca 757
||| ||| || |||||||| || |||||||||| |||||||| ||||| ||||| |||
Sbjct: 260 ccagtaaggagaactggctttagagagtcatacagcccaaagtagagaccacggtagaca 201
Query: 758 atgatccccacacaagatatattgaatccacggtagaggccacgaataccatc--actgg 815
||||| || ||||| || || |||||||||||||| || ||| ||||||||| ||| |
Sbjct: 200 atgattccaacacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg 141
Query: 816 caagggtcttgcggtaaacatcaacgagtccattgaactgcctctcacc 864
|| ||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 140 --agagtcttgcggtagacatcaacaaggccattgaactgcctttcacc 94
>gb|CD663174.1|CD663174 UCRHV18_04ce01_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_04ce01, mRNA sequence
Length = 806
Score = 204 bits (103), Expect = 6e-051
Identities = 367/453 (81%), Gaps = 4/453 (0%)
Strand = Plus / Plus
Query: 407 ccgtacttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagca 466
||||||||||||||||||| | | |||||||| ||||| || | || |||||||||
Sbjct: 348 ccgtacttcttgccgaagaagaggatctggagctgatcgtagccggagagcacaccagca 407
Query: 467 ccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcc 526
||||| | || ||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 408 ccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttggcaccctcc 467
Query: 527 tttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagat 586
|| || | ||||| |||||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct: 468 ttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcctccccggag 527
Query: 587 gtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatg 646
||||||||||| | | ||| || |||||||||||||| || ||||| || ||||| ||
Sbjct: 528 gtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagacccgcaccgttg 587
Query: 647 gttataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaacaaga 706
|| || ||| || || |||||||| |||||||| ||||| || || ||| |||
Sbjct: 588 gtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtgccagtaagg 647
Query: 707 agcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatcccc 766
|| |||||||| || |||||||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 648 agaactggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattcca 707
Query: 767 acacaagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtct 824
||||| || || |||||||||||||| || ||| ||||||||| ||| | || ||||
Sbjct: 708 acacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtct 765
Query: 825 tgcggtaaacatcaacgagtccattgaactgcc 857
||||||| |||||||| || |||||||||||||
Sbjct: 766 tgcggtagacatcaacaaggccattgaactgcc 798
>gb|BF627494.2|BF627494 HVSMEb0005A04f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0005A04f, mRNA sequence
Length = 756
Score = 202 bits (102), Expect = 3e-050
Identities = 216/254 (85%)
Strand = Plus / Minus
Query: 911 tagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccaga 970
|||||||| || || || ||||| || ||| |||||||||| || ||||||||||| ||
Sbjct: 740 tagtccagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaagg 681
Query: 971 tttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttg 1030
|| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | ||||
Sbjct: 680 ttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttg 621
Query: 1031 aagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagct 1090
|||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| || ||
Sbjct: 620 aagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgttggca 561
Query: 1091 gtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtcc 1150
|| ||||||||||||| |||| |||| || || || |||| || || |||||||||||
Sbjct: 560 gtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagcagtca 501
Query: 1151 ccaatacccttgta 1164
||||||||||||||
Sbjct: 500 ccaatacccttgta 487
>gb|BF260655.2|BF260655 HVSMEf0022J11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0022J11f, mRNA sequence
Length = 804
Score = 202 bits (102), Expect = 3e-050
Identities = 216/254 (85%)
Strand = Plus / Minus
Query: 911 tagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccaga 970
|||||||| || || || ||||| || ||| |||||||||| |||||||||||||| ||
Sbjct: 433 tagtccagggagtacacgaagaacagcgaggaagcaccagcggctccaccagaagcaagg 374
Query: 971 tttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttg 1030
|| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | | ||
Sbjct: 373 ttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcgtg 314
Query: 1031 aagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagct 1090
|||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| || ||
Sbjct: 313 aagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgttggca 254
Query: 1091 gtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtcc 1150
|| ||||||||||||| |||| |||| || || || |||| || || |||||||||||
Sbjct: 253 gtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagcagtca 194
Query: 1151 ccaatacccttgta 1164
||||||||||||||
Sbjct: 193 ccaatacccttgta 180
Score = 56.0 bits (28), Expect = 4e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 821 gtcttgcggtaaacatcaacgagtccattgaactgcctctcacc 864
||||||||||| |||||||| || |||||||||||||| |||||
Sbjct: 523 gtcttgcggtagacatcaacaaggccattgaactgcctttcacc 480
>gb|BE455757.3|BE455757 HVSMEg0019K14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019K14f, mRNA sequence
Length = 831
Score = 202 bits (102), Expect = 3e-050
Identities = 216/254 (85%)
Strand = Plus / Minus
Query: 911 tagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccaga 970
|||||||| || || || ||||| || ||| |||||||||| || ||||||||||| ||
Sbjct: 408 tagtccagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaagg 349
Query: 971 tttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttg 1030
|| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | ||||
Sbjct: 348 ttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttg 289
Query: 1031 aagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagct 1090
|||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| || ||
Sbjct: 288 aagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgttggca 229
Query: 1091 gtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtcc 1150
|| ||||||||||||| |||| |||| || || || |||| || || |||||||||||
Sbjct: 228 gtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagcagtca 169
Query: 1151 ccaatacccttgta 1164
||||||||||||||
Sbjct: 168 ccaatacccttgta 155
>gb|BG369191.2|BG369191 HVSMEi0023A16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0023A16f, mRNA sequence
Length = 916
Score = 202 bits (102), Expect = 3e-050
Identities = 216/254 (85%)
Strand = Plus / Minus
Query: 911 tagtccagagaatagacaaagaatagagagcaagcaccagcagctccaccagaagccaga 970
|||||||| || || || ||||| || ||| |||||||||| || ||||||||||| ||
Sbjct: 469 tagtccagggagtacacgaagaacagcgaggaagcaccagcggcaccaccagaagcaagg 410
Query: 971 tttccagcaaaccacttccagtacccatccttgtccttcttaaagttgaacatgcgcttg 1030
|| ||| | |||||||||||||| ||||||||||||||||| ||||||||||| | ||||
Sbjct: 409 ttgccaccgaaccacttccagtaaccatccttgtccttcttgaagttgaacatcctcttg 350
Query: 1031 aagtgatccttgaacgcaaagttcaatgcctgtgtggggaagtaacggatgacattagct 1090
|||| ||||||||| ||||||||||| ||||| || ||||||||||||||||| || ||
Sbjct: 349 aagtaatccttgaatgcaaagttcaaagcctgagttgggaagtaacggatgacgttggca 290
Query: 1091 gtgtttcctctccacagtgagacaaaaccctcatctctgattgtccggccaaagcagtcc 1150
|| ||||||||||||| |||| |||| || || || |||| || || |||||||||||
Sbjct: 289 gtatttcctctccacaatgagccaaagccttcttccttgatggtgcgtccaaagcagtca 230
Query: 1151 ccaatacccttgta 1164
||||||||||||||
Sbjct: 229 ccaatacccttgta 216
>gb|BF266874.3|BF266874 HV_CEa0016E19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0016E19f, mRNA sequence
Length = 837
Score = 202 bits (102), Expect = 3e-050
Identities = 372/460 (80%), Gaps = 4/460 (0%)
Strand = Plus / Minus
Query: 407 ccgtacttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagca 466
||||||||||||||||||| | | |||||||| ||||| || | || |||||||||
Sbjct: 481 ccgtacttcttgccgaagaagaggatctggagctgatcgtagccggagagcacaccagca 422
Query: 467 ccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcc 526
||||| | || ||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 421 ccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttggcaccctcc 362
Query: 527 tttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagat 586
|| || | ||||| |||||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct: 361 ttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcctccccggag 302
Query: 587 gtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatg 646
||||||||||| | | ||| || |||||||||||||| || ||||| || ||||| ||
Sbjct: 301 gtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagacccgcaccgttg 242
Query: 647 gttataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaacaaga 706
|| || ||| || || |||||||| |||||||| ||||| || || ||| ||
Sbjct: 241 gtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtgccagtgagg 182
Query: 707 agcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatcccc 766
|| |||||||| || |||||||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 181 agaactggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattcca 122
Query: 767 acacaagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtct 824
||||| || || |||||||||||||| || ||| ||||||||| ||| | || ||||
Sbjct: 121 acacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtct 64
Query: 825 tgcggtaaacatcaacgagtccattgaactgcctctcacc 864
||||||| |||||||| || |||||||||||||| |||||
Sbjct: 63 tgcggtagacatcaacaaggccattgaactgcctttcacc 24
>gb|AV908950.1|AV908950 AV908950 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11a19 5', mRNA sequence
Length = 632
Score = 202 bits (102), Expect = 3e-050
Identities = 372/460 (80%), Gaps = 4/460 (0%)
Strand = Plus / Minus
Query: 407 ccgtacttcttgccgaagacaaccacctggagcttgtcgtacccagcaaggacaccagca 466
||||||||||||||||||| | | |||||||| ||||| || | || |||||||||
Sbjct: 493 ccgtacttcttgccgaagaagaggatctggagctgatcgtagccggagagcacaccagca 434
Query: 467 ccagctacagcgcggaggatgtttgcgccagcacccttgaagagggacttggtaccctcc 526
||||| | || ||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 433 ccagcaatggcacggaggatgttagcaccagcacccttgaagagggacttggcaccctcc 374
Query: 527 tttgcgacaatctgcttgaaagcgtccaaggagctgttgtacttgacggcctcaccagat 586
|| || | ||||| |||||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct: 373 ttagccaggatctgattgaaagcatccaaggagctcttgtacttgacagcctccccggag 314
Query: 587 gtcatcatcatgcgacggcgaacagtgtcaatggggtaggaggcaaggccagcaccaatg 646
||||||||||| | | ||| || |||||||||||||| || ||||| || ||||| ||
Sbjct: 313 gtcatcatcatccttctgcggaccgtgtcaatggggtaagatgcaagacccgcaccgttg 254
Query: 647 gttataccccacccgagcaagaagctggctaagaagttatcctgcagggtaccaacaaga 706
|| || ||| || || |||||||| |||||||| ||||| || || ||| ||
Sbjct: 253 gtgatcaaccaaccaagagcaaagctggcaaagaagttgtcctggagagtgccagtgagg 194
Query: 707 agcactggcttcagggagtcatacataccaaagtaaagacctcggtacacaatgatcccc 766
|| |||||||| || |||||||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 193 agaactggctttagagagtcatacagcccaaagtagagaccacggtagacaatgattcca 134
Query: 767 acacaagatatattgaatccacggtagaggccacgaataccatc--actggcaagggtct 824
||||| || || |||||||||||||| || ||| ||||||||| ||| | || ||||
Sbjct: 133 acacaggagatgttgaatccacggtaaagcccagcaataccatctgacttg--agagtct 76
Query: 825 tgcggtaaacatcaacgagtccattgaactgcctctcacc 864
||||||| |||||||| || |||||||||||||| |||||
Sbjct: 75 tgcggtagacatcaacaaggccattgaactgcctttcacc 36
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 139,380
Number of Sequences: 312970
Number of extensions: 139380
Number of successful extensions: 41483
Number of sequences better than 0.5: 366
Number of HSP's better than 0.5 without gapping: 365
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 40535
Number of HSP's gapped (non-prelim): 881
length of query: 1589
length of database: 175,134,539
effective HSP length: 19
effective length of query: 1570
effective length of database: 169,188,109
effective search space: 265625331130
effective search space used: 265625331130
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)