BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL16c05.xg.2.1
(687 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN604588.1|DN604588 JCAt5g26655 Arabidopsis Gateway cDNA... 98 2e-018
gb|DN604669.1|DN604669 JCAt5g26660 Arabidopsis Gateway cDNA... 98 2e-018
gb|DR751076.1|DR751076 24-L022342-065-009-H03-SeLA MPIZ-ADI... 98 2e-018
gb|AY099777.1| Arabidopsis thaliana transcription factor AT... 98 2e-018
emb|AX506793.1| Sequence 1488 from Patent WO0216655 98 2e-018
gb|BT008740.1| Arabidopsis thaliana At5g26655 gene, complet... 98 2e-018
gb|AY519629.1| Arabidopsis thaliana MYB transcription facto... 98 2e-018
dbj|AB005889.1| Arabidopsis thaliana mRNA for ATMYB4, compl... 98 2e-018
ref|NM_180548.1| Arabidopsis thaliana ATMYB4; transcription... 98 2e-018
gb|AV824550.1|AV824550 AV824550 RAFL6 Arabidopsis thaliana ... 92 1e-016
gb|DR750511.1|DR750511 52-L022342-065-009-D07-SeLA MPIZ-ADI... 92 1e-016
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 92 1e-016
gb|AY063939.1| Arabidopsis thaliana putative transcription ... 92 1e-016
gb|AY096523.1| Arabidopsis thaliana putative transcription ... 92 1e-016
gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 ... 92 1e-016
gb|AY519552.1| Arabidopsis thaliana MYB transcription facto... 92 1e-016
emb|BX816478.1|CNS0ABM8 Arabidopsis thaliana Full-length cD... 92 1e-016
emb|BX816499.1|CNS0ACDN Arabidopsis thaliana Full-length cD... 92 1e-016
ref|NM_100825.3| Arabidopsis thaliana MYB61; DNA binding / ... 92 1e-016
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 92 1e-016
emb|BX832021.1|CNS0A15K Arabidopsis thaliana Full-length cD... 90 6e-016
gb|BP562408.2|BP562408 BP562408 RAFL9 Arabidopsis thaliana ... 84 4e-014
emb|AL080851.1|CNS00MNP Arabidopsis thaliana genome survey ... 76 9e-012
gb|DR750842.1|DR750842 36-L022342-065-009-D05-SeLA MPIZ-ADI... 76 9e-012
emb|AX651295.1| Sequence 80 from Patent WO03000898 76 9e-012
gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BA... 76 9e-012
gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 ... 76 9e-012
gb|AY550304.1| Arabidopsis thaliana MYB transcription facto... 76 9e-012
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 76 9e-012
ref|NM_104552.1| Arabidopsis thaliana DNA binding / transcr... 76 9e-012
gb|AY089060.1| Arabidopsis thaliana clone 250386 mRNA, comp... 74 4e-011
gb|AF058914.1|F21E10 Arabidopsis thaliana BAC F21E10, compl... 62 1e-007
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 62 1e-007
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 62 1e-007
gb|DN604595.1|DN604595 JCAt5g10280 Arabidopsis Gateway cDNA... 60 5e-007
gb|DN604600.1|DN604600 JCAt1g34670 Arabidopsis Gateway cDNA... 60 5e-007
gb|DR751410.1|DR751410 07-L022342-065-009-G01-SeLA MPIZ-ADI... 60 5e-007
gb|AF062916.1|AF062916 Arabidopsis thaliana putative transc... 60 5e-007
gb|BT002877.1| Arabidopsis thaliana clone RAFL14-88-D17 (R2... 60 5e-007
gb|BT004402.1| Arabidopsis thaliana clone U20400 putative m... 60 5e-007
gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F... 60 5e-007
gb|AY519560.1| Arabidopsis thaliana MYB transcription facto... 60 5e-007
gb|AY519619.1| Arabidopsis thaliana MYB transcription facto... 60 5e-007
emb|BX832556.1|CNS09ZV7 Arabidopsis thaliana Full-length cD... 60 5e-007
ref|NM_103190.1| Arabidopsis thaliana DNA binding / transcr... 60 5e-007
ref|NM_121066.2| Arabidopsis thaliana MYB92; DNA binding / ... 60 5e-007
emb|AL091219.1|CNS00UNP Arabidopsis thaliana genome survey ... 58 2e-006
gb|DN604603.1|DN604603 JCAt3g61250 Arabidopsis Gateway cDNA... 58 2e-006
gb|DR749878.1|DR749878 86-L022342-065-009-F11-SeLA MPIZ-ADI... 58 2e-006
gb|DR749879.1|DR749879 86-L022343-065-009-F11-SeLB MPIZ-ADI... 58 2e-006
gb|AY519601.1| Arabidopsis thaliana MYB transcription facto... 58 2e-006
emb|BX823909.1|CNS0A5GO Arabidopsis thaliana Full-length cD... 58 2e-006
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 58 2e-006
emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome... 58 2e-006
ref|NM_115989.3| Arabidopsis thaliana DNA binding / transcr... 58 2e-006
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 58 2e-006
gb|AV831214.1|AV831214 AV831214 RAFL9 Arabidopsis thaliana ... 54 3e-005
gb|DN604572.1|DN604572 JCAt2g47460 Arabidopsis Gateway cDNA... 54 3e-005
gb|DR750385.1|DR750385 58-L022342-065-009-B08-SeLA MPIZ-ADI... 54 3e-005
gb|AF062864.1|AF062864 Arabidopsis thaliana putative transc... 54 3e-005
gb|AY060588.1| Arabidopsis thaliana At2g47460/T30B22.24 mRN... 54 3e-005
gb|AY142067.1| Arabidopsis thaliana At2g47460/T30B22.24 mRN... 54 3e-005
gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B... 54 3e-005
gb|AY519580.1| Arabidopsis thaliana MYB transcription facto... 54 3e-005
emb|BX819280.1|CNS0A8Y6 Arabidopsis thaliana Full-length cD... 54 3e-005
gb|DQ224277.1| Arabidopsis thaliana MYB12 (MYB12) gene, MYB... 54 3e-005
ref|NM_130314.2| Arabidopsis thaliana MYB12; DNA binding / ... 54 3e-005
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 54 3e-005
emb|AJ593433.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 1e-004
emb|AJ593434.1| Arabidopsis thaliana T-DNA flanking sequenc... 52 1e-004
gb|DN604604.1|DN604604 JCAt3g12820 Arabidopsis Gateway cDNA... 52 1e-004
gb|DR751342.1|DR751342 11-L021127-065-005-C02-SeLA MPIZ-ADI... 52 1e-004
gb|AY519586.1| Arabidopsis thaliana MYB transcription facto... 52 1e-004
dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosom... 52 1e-004
ref|NM_112118.2| Arabidopsis thaliana DNA binding / transcr... 52 1e-004
gb|BX838598.1|BX838598 BX838598 Arabidopsis thaliana Flower... 50 5e-004
emb|BX823114.1|CNS0A624 Arabidopsis thaliana Full-length cD... 50 5e-004
gb|AF062896.1|AF062896 Arabidopsis thaliana putative transc... 48 0.002
gb|AY519602.1| Arabidopsis thaliana MYB transcription facto... 48 0.002
emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome ... 48 0.002
ref|NM_116126.2| Arabidopsis thaliana DNA binding / transcr... 48 0.002
gb|AV442823.1|AV442823 AV442823 Arabidopsis thaliana above-... 46 0.008
gb|AV537029.1|AV537029 AV537029 Arabidopsis thaliana liquid... 46 0.008
gb|BP845361.1|BP845361 BP845361 RAFL21 Arabidopsis thaliana... 46 0.008
gb|DN604617.1|DN604617 JCAt5g23000 Arabidopsis Gateway cDNA... 46 0.008
gb|DR750359.1|DR750359 60-L022342-065-009-D08-SeLA MPIZ-ADI... 46 0.008
gb|DR750512.1|DR750512 52-L022343-065-009-D07-SeLB MPIZ-ADI... 46 0.008
emb|AX507548.1| Sequence 2243 from Patent WO0216655 46 0.008
gb|AY089148.1| Arabidopsis thaliana clone 38611 mRNA, compl... 46 0.008
gb|AY519597.1| Arabidopsis thaliana MYB transcription facto... 46 0.008
gb|AY519628.1| Arabidopsis thaliana MYB transcription facto... 46 0.008
emb|BX832392.1|CNS09YP1 Arabidopsis thaliana Full-length cD... 46 0.008
emb|BX819637.1|CNS0A8W4 Arabidopsis thaliana Full-length cD... 46 0.008
dbj|AB026660.1| Arabidopsis thaliana genomic DNA, chromosom... 46 0.008
dbj|AK175507.1| Arabidopsis thaliana mRNA for myb like tran... 46 0.008
emb|AJ131517.1|ATH131517 Arabidopsis thaliana MYB37 homolog... 46 0.008
emb|AL132965.1|ATT16K5 Arabidopsis thaliana DNA chromosome ... 46 0.008
emb|AL132964.2|ATT9C5 Arabidopsis thaliana DNA chromosome 3... 46 0.008
emb|Y14209.1|ATY14209 A.thaliana mRNA for AtMYB84 R2R3-MYB ... 46 0.008
emb|CS137508.1| Sequence 479 from Patent WO2005047516 46 0.008
ref|NM_122206.2| Arabidopsis thaliana DNA binding / transcr... 46 0.008
ref|NM_114829.2| Arabidopsis thaliana DNA binding / transcr... 46 0.008
emb|BX944978.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.031
emb|CR356827.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.031
gb|CW795508.1|CW795508 WiscDsLox445B08 Arabidopsis thaliana... 44 0.031
gb|DN604574.1|DN604574 JCAt5g56110 Arabidopsis Gateway cDNA... 44 0.031
gb|DR750714.1|DR750714 42-L022342-065-009-B06-SeLA MPIZ-ADI... 44 0.031
gb|DR751343.1|DR751343 11-L021131-065-005-C02-SeLB MPIZ-ADI... 44 0.031
gb|AF214116.2|AF214116 Arabidopsis thaliana putative transc... 44 0.031
gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BA... 44 0.031
gb|AY519564.1| Arabidopsis thaliana MYB transcription facto... 44 0.031
gb|AY519639.1| Arabidopsis thaliana MYB transcription facto... 44 0.031
ref|NM_124993.1| Arabidopsis thaliana DNA binding / transcr... 44 0.031
ref|NM_105065.2| Arabidopsis thaliana ATMYB103; DNA binding... 44 0.031
gb|CW841413.1|CW841413 ET11194.Ds3.03.20.2003.jw84.762 Arab... 42 0.12
gb|DN604590.1|DN604590 JCAt3g13890 Arabidopsis Gateway cDNA... 42 0.12
gb|DR750081.1|DR750081 74-L022342-065-009-B10-SeLA MPIZ-ADI... 42 0.12
gb|AF048839.1|AF048839 Arabidopsis thaliana Atmyb103 (MYB10... 42 0.12
gb|AF175997.1|AF175997 Arabidopsis thaliana putative transc... 42 0.12
emb|AX405297.1| Sequence 2 from Patent WO0227001 42 0.12
gb|AY519588.1| Arabidopsis thaliana MYB transcription facto... 42 0.12
emb|BX814709.1|CNS0AC2T Arabidopsis thaliana Full-length cD... 42 0.12
dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.12
dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosom... 42 0.12
emb|AJ839985.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.12
emb|AJ839987.1| Arabidopsis thaliana T-DNA flanking sequenc... 42 0.12
emb|Z95743.1|ATZ95743 Arabidopsis thaliana mRNA for AtMYB17... 42 0.12
ref|NM_112243.2| Arabidopsis thaliana MYB26; DNA binding / ... 42 0.12
gb|DR749628.1|DR749628 68-L020913-065-003-D09-SeLA MPIZ-ADI... 40 0.49
gb|DR750360.1|DR750360 60-L022343-065-009-D08-SeLB MPIZ-ADI... 40 0.49
gb|AF371977.1|AF371977 Arabidopsis thaliana putative transc... 40 0.49
gb|AY519626.1| Arabidopsis thaliana MYB transcription facto... 40 0.49
gb|AY519634.1| Arabidopsis thaliana MYB transcription facto... 40 0.49
emb|BX833444.1|CNS09Z5T Arabidopsis thaliana Full-length cD... 40 0.49
dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosom... 40 0.49
emb|AL391147.1|ATF5E19 Arabidopsis thaliana DNA chromosome ... 40 0.49
emb|Z95739.1|ATZ95739 Arabidopsis thaliana mRNA for AtMYB11... 40 0.49
emb|Z95808.1|ATZ95808 Arabidopsis thaliana mRNA for AtMYB86... 40 0.49
ref|NM_124310.2| Arabidopsis thaliana DNA binding / transcr... 40 0.49
ref|NM_121683.3| Arabidopsis thaliana DNA binding / transcr... 40 0.49
ref|NM_203063.1| Arabidopsis thaliana DNA binding AT5G16770... 40 0.49
>gb|DN604588.1|DN604588 JCAt5g26655 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 689
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 20 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 79
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 80 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 139
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 140 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 199
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 200 gctttctctcaagacgaagaa 220
>gb|DN604669.1|DN604669 JCAt5g26660 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 512
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 20 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 79
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 80 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 139
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 140 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 199
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 200 gctttctctcaagacgaagaa 220
>gb|DR751076.1|DR751076 24-L022342-065-009-H03-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-H03, mRNA sequence
Length = 899
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 109 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 168
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 169 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 228
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 229 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 288
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 289 gctttctctcaagacgaagaa 309
>gb|AY099777.1| Arabidopsis thaliana transcription factor ATMYB4 (At5g26655) mRNA,
complete cds
Length = 1341
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 151 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 210
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 211 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 270
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 271 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 330
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 331 gctttctctcaagacgaagaa 351
>emb|AX506793.1| Sequence 1488 from Patent WO0216655
Length = 1059
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 25 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 84
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 85 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 144
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 145 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 204
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 205 gctttctctcaagacgaagaa 225
>gb|BT008740.1| Arabidopsis thaliana At5g26655 gene, complete cds
Length = 1059
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 25 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 84
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 85 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 144
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 145 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 204
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 205 gctttctctcaagacgaagaa 225
>gb|AY519629.1| Arabidopsis thaliana MYB transcription factor (At5g26660) mRNA,
complete cds
Length = 1059
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 25 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 84
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 85 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 144
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 145 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 204
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 205 gctttctctcaagacgaagaa 225
>dbj|AB005889.1| Arabidopsis thaliana mRNA for ATMYB4, complete cds
Length = 1364
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 142 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 201
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 202 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 261
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 262 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 321
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 322 gctttctctcaagacgaagaa 342
>ref|NM_180548.1| Arabidopsis thaliana ATMYB4; transcriptional repressor AT5G26660
(ATMYB4) mRNA, complete cds
Length = 1387
Score = 97.6 bits (49), Expect = 2e-018
Identities = 163/201 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 151 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 210
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| ||||| || |||||||| || | |||||
Sbjct: 211 atcactagacatggtcatggctgttggagttctgtccctaaactcgcaggtttgcaaaga 270
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 271 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 330
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 331 gctttctctcaagacgaagaa 351
>gb|AV824550.1|AV824550 AV824550 RAFL6 Arabidopsis thaliana cDNA clone RAFL06-72-D11 5',
mRNA sequence
Length = 605
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 174 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 233
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 234 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 293
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 294 cctaaactcgctgg 307
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 480 gagatcaagaatctatggaactcaagcatcaag 512
>gb|DR750511.1|DR750511 52-L022342-065-009-D07-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-D07, mRNA sequence
Length = 917
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 74 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 133
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 134 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 193
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 194 cctaaactcgctgg 207
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 380 gagatcaagaatctatggaactcaagcatcaag 412
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 3086155 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 3086214
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 3086215 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 3086274
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 3086275 cctaaactcgctgg 3086288
Score = 60.0 bits (30), Expect = 5e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| |||||||||||||| |||||||||| ||| ||| |||| |||||| |||| |||
Sbjct: 12718160 aggtgtggaaagagttgtagactgaggtggacaaattatttgagaccagacatcaaaaga 12718219
Query: 485 gg 486
||
Sbjct: 12718220 gg 12718221
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 3086717 gagatcaagaatctatggaactcaagcatcaag 3086749
>gb|AY063939.1| Arabidopsis thaliana putative transcription factor (At1g09540)
mRNA, complete cds
Length = 1512
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 173 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 232
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 233 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 292
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 293 cctaaactcgctgg 306
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 479 gagatcaagaatctatggaactcaagcatcaag 511
>gb|AY096523.1| Arabidopsis thaliana putative transcription factor protein
(At1g09540) mRNA, complete cds
Length = 1132
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 1 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 60
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 61 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 120
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 121 cctaaactcgctgg 134
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 307 gagatcaagaatctatggaactcaagcatcaag 339
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains
phyA marker, complete sequence
Length = 95865
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 67936 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 67995
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 67996 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 68055
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 68056 cctaaactcgctgg 68069
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 68498 gagatcaagaatctatggaactcaagcatcaag 68530
>gb|AY519552.1| Arabidopsis thaliana MYB transcription factor (At1g09540) mRNA,
complete cds
Length = 1101
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 1 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 60
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 61 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 120
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 121 cctaaactcgctgg 134
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 307 gagatcaagaatctatggaactcaagcatcaag 339
>emb|BX816478.1|CNS0ABM8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH50ZF08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1374
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 141 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 200
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 201 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 260
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 261 cctaaactcgctgg 274
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 447 gagatcaagaatctatggaactcaagcatcaag 479
>emb|BX816499.1|CNS0ACDN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH52ZC11 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1452
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 134 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 193
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 194 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 253
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 254 cctaaactcgctgg 267
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 440 gagatcaagaatctatggaactcaagcatcaag 472
>ref|NM_100825.3| Arabidopsis thaliana MYB61; DNA binding / transcription factor
AT1G09540 (MYB61) mRNA, complete cds
Length = 1496
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 173 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 232
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 233 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 292
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 293 cctaaactcgctgg 306
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 479 gagatcaagaatctatggaactcaagcatcaag 511
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 91.7 bits (46), Expect = 1e-016
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 284 atggggaggcattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgag 343
|||||||| ||||||||||| ||||| || |||||||| || ||||| ||||| |||||
Sbjct: 3086335 atggggagacattcttgctgttacaaacaaaagctgaggaaagggctttggtctcctgaa 3086394
Query: 344 gaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggagctctgtt 403
|| || ||||| || | | |||||| || || || |||||||||||||||||||||||
Sbjct: 3086395 gaagacgagaagcttcttactcacatcaccaatcacggccatggctgctggagctctgtc 3086454
Query: 404 cccaaactcgctgg 417
|| |||||||||||
Sbjct: 3086455 cctaaactcgctgg 3086468
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 21320525 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 21320584
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 21320585 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 21320644
Query: 413 gc 414
||
Sbjct: 21320645 gc 21320646
Score = 60.0 bits (30), Expect = 5e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| |||||||||||||| |||||||||| ||| ||| |||| |||||| |||| |||
Sbjct: 12709364 aggtgtggaaagagttgtagactgaggtggacaaattatttgagaccagacatcaaaaga 12709423
Query: 485 gg 486
||
Sbjct: 12709424 gg 12709425
Score = 48.1 bits (24), Expect = 0.002
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 593 gagatcaagaatctatggaactcnnncatcaag 625
||||||||||||||||||||||| |||||||
Sbjct: 3086897 gagatcaagaatctatggaactcaagcatcaag 3086929
Score = 44.1 bits (22), Expect = 0.031
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 416 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatct 465
||||||||||| || ||||| |||||||| || | ||||||||||||||
Sbjct: 23725028 gggcttcaaagatgtggaaaaagttgtagattgcgatggataaactatct 23724979
>emb|BX832021.1|CNS0A15K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH47ZA08 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1240
Score = 89.7 bits (45), Expect = 6e-016
Identities = 162/201 (80%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 48 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 107
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggcttcaaagg 427
|| || | ||||| |||||||| ||||| |||| || |||||||| || | |||||
Sbjct: 108 atcactagacatggtcatggctgttggagggctgtccctaaactcgcaggtttgcaaaga 167
Query: 428 tgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagagaggg 487
|| |||||||||||||| || ||||||||||| ||| |||| ||||| | ||||||||
Sbjct: 168 tgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaagagagga 227
Query: 488 gcattcgcccaagacgaagaa 508
|| ||| | ||||||||||||
Sbjct: 228 gctttctctcaagacgaagaa 248
>gb|BP562408.2|BP562408 BP562408 RAFL9 Arabidopsis thaliana cDNA clone RAFL09-80-M20 5',
mRNA sequence
Length = 325
Score = 83.8 bits (42), Expect = 4e-014
Identities = 133/162 (82%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 152 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 211
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgctgggctt-caaag 426
|| || | |||||||||||||| ||||| ||||| || |||||||| || || |||||
Sbjct: 212 atcactagacatggccatggctgttggagttctgtccctaaactcgcaggttttgcaaag 271
Query: 427 gtgcggaaagagttgtaggctgaggtggataaactatctgag 468
|| |||||||||||||| || ||||||||||| ||| ||||
Sbjct: 272 atgtggaaagagttgtagacttaggtggataaattatttgag 313
>emb|AL080851.1|CNS00MNP Arabidopsis thaliana genome survey sequence SP6 end of BAC F1O1 of
IGF library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 528
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 478 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 419
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 418 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 359
Query: 413 gc 414
||
Sbjct: 358 gc 357
>gb|DR750842.1|DR750842 36-L022342-065-009-D05-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-D05, mRNA sequence
Length = 844
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 93 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 152
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 153 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 212
Query: 413 gc 414
||
Sbjct: 213 gc 214
>emb|AX651295.1| Sequence 80 from Patent WO03000898
Length = 1737
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 10 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 69
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 70 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 129
Query: 413 gc 414
||
Sbjct: 130 gc 131
>gb|AC009323.4|AC009323 Arabidopsis thaliana chromosome I BAC F25P12 genomic sequence,
complete sequence
Length = 141748
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 484 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 425
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 424 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 365
Query: 413 gc 414
||
Sbjct: 364 gc 363
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence,
complete sequence
Length = 90448
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 7503 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 7562
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 7563 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 7622
Query: 413 gc 414
||
Sbjct: 7623 gc 7624
>gb|AY550304.1| Arabidopsis thaliana MYB transcription factor (At1g57557) mRNA,
complete cds
Length = 945
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 10 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 69
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 70 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 129
Query: 413 gc 414
||
Sbjct: 130 gc 131
>gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom arm complete sequence
Length = 14668883
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 5676301 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 5676360
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 5676361 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 5676420
Query: 413 gc 414
||
Sbjct: 5676421 gc 5676422
Score = 44.1 bits (22), Expect = 0.031
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 416 gggcttcaaaggtgcggaaagagttgtaggctgaggtggataaactatct 465
||||||||||| || ||||| |||||||| || | ||||||||||||||
Sbjct: 7962680 gggcttcaaagatgtggaaaaagttgtagattgcgatggataaactatct 7962631
>ref|NM_104552.1| Arabidopsis thaliana DNA binding / transcription factor AT1G57560
mRNA, complete cds
Length = 1073
Score = 75.8 bits (38), Expect = 9e-012
Identities = 101/122 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 33 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 92
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 93 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 152
Query: 413 gc 414
||
Sbjct: 153 gc 154
>gb|AY089060.1| Arabidopsis thaliana clone 250386 mRNA, complete sequence
Length = 1071
Score = 73.8 bits (37), Expect = 4e-011
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 293 cattcttgctgctacaagcagaagctgagaaaggggctctggtcccctgaggaggatgag 352
|||||||| || ||||| || ||||||||||| || || ||||| ||||| || ||||||
Sbjct: 33 cattcttgttgttacaaacaaaagctgagaaaaggtctttggtctcctgaagaagatgag 92
Query: 353 aaactcatgaatcacataacaaagcatggccatggctgctggagctctgttcccaaactc 412
||||| | ||| |||| || || ||||||||||| |||||||| ||||| || ||||||
Sbjct: 93 aaacttctcaattacattaccaaacatggccatggttgctggagttctgtccctaaactc 152
Query: 413 g 413
|
Sbjct: 153 g 153
>gb|AF058914.1|F21E10 Arabidopsis thaliana BAC F21E10, complete sequence
Length = 111767
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 422 caaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaag 481
||||| || |||||||||||||| || ||||||||||| ||| |||| ||||| | |||
Sbjct: 65771 caaagatgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaag 65830
Query: 482 agaggggcattcgcccaagacgaagaa 508
||||| || ||| | ||||||||||||
Sbjct: 65831 agaggagctttctctcaagacgaagaa 65857
Score = 54.0 bits (27), Expect = 3e-005
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 65553 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 65612
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgc 414
|| || | ||||| |||||||| ||||| ||||| || ||||||||
Sbjct: 65613 atcactagacatggtcatggctgttggagttctgtccctaaactcgc 65659
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 422 caaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaag 481
||||| || |||||||||||||| || ||||||||||| ||| |||| ||||| | |||
Sbjct: 8824217 caaagatgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaag 8824276
Query: 482 agaggggcattcgcccaagacgaagaa 508
||||| || ||| | ||||||||||||
Sbjct: 8824277 agaggagctttctctcaagacgaagaa 8824303
Score = 54.0 bits (27), Expect = 3e-005
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 8823999 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 8824058
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgc 414
|| || | ||||| |||||||| ||||| ||||| || ||||||||
Sbjct: 8824059 atcactagacatggtcatggctgttggagttctgtccctaaactcgc 8824105
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 434 aagagttgtaggctgaggtggataaactatctg 466
||||||||||||||| | |||| ||||||||||
Sbjct: 20277294 aagagttgtaggctgcgatggacaaactatctg 20277326
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 431 ggaaagagttgtaggctgaggtggataaacta 462
|||||||| ||||| || ||||||||||||||
Sbjct: 18041041 ggaaagagctgtagactaaggtggataaacta 18041010
Score = 40.1 bits (20), Expect = 0.49
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 341 gaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggag 396
||||||||||| ||||| || ||||||| ||| |||||||||||| |||||||
Sbjct: 5278242 gaggaggatgataaactgatagatcacattcaaaaacatggccatggcagctggag 5278297
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 422 caaaggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaag 481
||||| || |||||||||||||| || ||||||||||| ||| |||| ||||| | |||
Sbjct: 9332805 caaagatgtggaaagagttgtagacttaggtggataaattatttgagaccagatttaaag 9332746
Query: 482 agaggggcattcgcccaagacgaagaa 508
||||| || ||| | ||||||||||||
Sbjct: 9332745 agaggagctttctctcaagacgaagaa 9332719
Score = 54.0 bits (27), Expect = 3e-005
Identities = 87/107 (81%)
Strand = Plus / Minus
Query: 308 aagcagaagctgagaaaggggctctggtcccctgaggaggatgagaaactcatgaatcac 367
||||||||||| ||||| || || ||||| ||||| || ||||||||||| | ||| ||
Sbjct: 9333023 aagcagaagctaagaaaaggcctttggtctcctgaagaagatgagaaacttctcaattac 9332964
Query: 368 ataacaaagcatggccatggctgctggagctctgttcccaaactcgc 414
|| || | ||||| |||||||| ||||| ||||| || ||||||||
Sbjct: 9332963 atcactagacatggtcatggctgttggagttctgtccctaaactcgc 9332917
Score = 46.1 bits (23), Expect = 0.008
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 434 aagagttgtaggctgaggtggataaactatctgag 468
||||||||||| ||||||||| |||||||| ||||
Sbjct: 7696482 aagagttgtagactgaggtggctaaactatttgag 7696516
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 434 aagagttgtaggctgaggtggataaactatctg 466
||||||||||||||| | |||| ||||||||||
Sbjct: 22736665 aagagttgtaggctgcgatggacaaactatctg 22736697
Score = 40.1 bits (20), Expect = 0.49
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 431 ggaaagagttgtaggctgaggtggataaacta 462
|||||||| ||||| || ||||||||||||||
Sbjct: 20018140 ggaaagagctgtagactaaggtggataaacta 20018109
Score = 40.1 bits (20), Expect = 0.49
Identities = 47/56 (83%)
Strand = Plus / Plus
Query: 341 gaggaggatgagaaactcatgaatcacataacaaagcatggccatggctgctggag 396
||||||||||| ||||| || ||||||| ||| |||||||||||| |||||||
Sbjct: 5515269 gaggaggatgataaactgatagatcacattcaaaaacatggccatggcagctggag 5515324
>gb|DN604595.1|DN604595 JCAt5g10280 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 681
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 114 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 173
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 174 acttgagaccagacatcaagagaggg 199
>gb|DN604600.1|DN604600 JCAt1g34670 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 686
Score = 60.0 bits (30), Expect = 5e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| |||||||||||||| |||||||||| ||| ||| |||| |||||| |||| |||
Sbjct: 137 aggtgtggaaagagttgtagactgaggtggacaaattatttgagaccagacatcaaaaga 196
Query: 485 gg 486
||
Sbjct: 197 gg 198
>gb|DR751410.1|DR751410 07-L022342-065-009-G01-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-G01, mRNA sequence
Length = 831
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 203 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 262
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 263 acttgagaccagacatcaagagaggg 288
>gb|AF062916.1|AF062916 Arabidopsis thaliana putative transcription factor (MYB92) mRNA,
complete cds
Length = 1493
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 378 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 437
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 438 acttgagaccagacatcaagagaggg 463
>gb|BT002877.1| Arabidopsis thaliana clone RAFL14-88-D17 (R20400) putative myb
family transcription factor (At5g10280) mRNA, complete
cds
Length = 1397
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 241 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 300
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 301 acttgagaccagacatcaagagaggg 326
>gb|BT004402.1| Arabidopsis thaliana clone U20400 putative myb family transcription
factor (At5g10280) mRNA, complete cds
Length = 1036
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 119 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 178
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 179 acttgagaccagacatcaagagaggg 204
>gb|AC007894.2|F21H2 Arabidopsis thaliana chromosome 1 BAC F21H2 sequence, complete sequence
Length = 88512
Score = 60.0 bits (30), Expect = 5e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| |||||||||||||| |||||||||| ||| ||| |||| |||||| |||| |||
Sbjct: 48802 aggtgtggaaagagttgtagactgaggtggacaaattatttgagaccagacatcaaaaga 48743
Query: 485 gg 486
||
Sbjct: 48742 gg 48741
>gb|AY519560.1| Arabidopsis thaliana MYB transcription factor (At1g34670) mRNA,
complete cds
Length = 1098
Score = 60.0 bits (30), Expect = 5e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| |||||||||||||| |||||||||| ||| ||| |||| |||||| |||| |||
Sbjct: 142 aggtgtggaaagagttgtagactgaggtggacaaattatttgagaccagacatcaaaaga 201
Query: 485 gg 486
||
Sbjct: 202 gg 203
>gb|AY519619.1| Arabidopsis thaliana MYB transcription factor (At5g10280) mRNA,
complete cds
Length = 1005
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 119 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 178
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 179 acttgagaccagacatcaagagaggg 204
>emb|BX832556.1|CNS09ZV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTPGH7ZH10 of Hormone Treated Callus of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1341
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 228 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 287
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 288 acttgagaccagacatcaagagaggg 313
>ref|NM_103190.1| Arabidopsis thaliana DNA binding / transcription factor AT1G34670
mRNA, complete cds
Length = 1098
Score = 60.0 bits (30), Expect = 5e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 425 aggtgcggaaagagttgtaggctgaggtggataaactatctgaggccagacctcaagaga 484
||||| |||||||||||||| |||||||||| ||| ||| |||| |||||| |||| |||
Sbjct: 142 aggtgtggaaagagttgtagactgaggtggacaaattatttgagaccagacatcaaaaga 201
Query: 485 gg 486
||
Sbjct: 202 gg 203
>ref|NM_121066.2| Arabidopsis thaliana MYB92; DNA binding / transcription factor
AT5G10280 (MYB92) mRNA, complete cds
Length = 1466
Score = 60.0 bits (30), Expect = 5e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 402 ttcccaaactcgctgggcttcaaaggtgcggaaagagttgtaggctgaggtggataaact 461
|||||||||||||||| ||| | ||||| || |||||||| ||||| || |||| ||||
Sbjct: 326 ttcccaaactcgctggtcttaacaggtgtgggaagagttgcaggctaagatggacgaact 385
Query: 462 atctgaggccagacctcaagagaggg 487
| |||| |||||| |||||||||||
Sbjct: 386 acttgagaccagacatcaagagaggg 411
>emb|AL091219.1|CNS00UNP Arabidopsis thaliana genome survey sequence T7 end of BAC T7H4 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 660
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 434 aagagttgtaggctgaggtggataaactatctgaggccagacctcaagagagg 486
|||||||| |||||||| |||| |||||||||||| |||||| | ||||||||
Sbjct: 56 aagagttgcaggctgagatggacaaactatctgagaccagacataaagagagg 108
>gb|DN604603.1|DN604603 JCAt3g61250 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 584
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 434 aagagttgtaggctgaggtggataaactatctgaggccagacctcaagagagg 486
|||||||| |||||||| |||| |||||||||||| |||||| | ||||||||
Sbjct: 146 aagagttgcaggctgagatggacaaactatctgagaccagacataaagagagg 198
>gb|DR749878.1|DR749878 86-L022342-065-009-F11-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-F11, mRNA sequence
Length = 938
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 434 aagagttgtaggctgaggtggataaactatctgaggccagacctcaagagagg 486
|||||||| |||||||| |||| |||||||||||| |||||| | ||||||||
Sbjct: 236 aagagttgcaggctgagatggacaaactatctgagaccagacataaagagagg 288
>gb|DR749879.1|DR749879 86-L022343-065-009-F11-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-F11, mRNA sequence
Length = 932
Score = 58.0 bits (29), Expect = 2e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 434 aagagttgtaggctgaggtggataaactatctgaggccagacctcaagagagg 486
|||||||| |||||||| |||| |||||||||||| |||||| | ||||||||
Sbjct: 841 aagagttgcaggctgagatggacaaactatctgagaccagacataaagagagg 789
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 320,102
Number of Sequences: 1013581
Number of extensions: 320102
Number of successful extensions: 27270
Number of sequences better than 0.5: 142
Number of HSP's better than 0.5 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24780
Number of HSP's gapped (non-prelim): 2478
length of query: 687
length of database: 908,940,872
effective HSP length: 20
effective length of query: 667
effective length of database: 888,669,252
effective search space: 592742391084
effective search space used: 592742391084
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)