BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521919.2.1
(2729 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV442128.1|AV442128 AV442128 Arabidopsis thaliana above-... 121 7e-025
gb|U22428.1|ATU22428 Arabidopsis thaliana starch branching ... 121 7e-025
emb|AX506177.1| Sequence 872 from Patent WO0216655 121 7e-025
emb|AX651816.1| Sequence 672 from Patent WO03000898 121 7e-025
ref|NM_120446.2| Arabidopsis thaliana SBE2.2 (STARCH BRANCH... 121 7e-025
gb|N37134.1|N37134 18469 Lambda-PRL2 Arabidopsis thaliana c... 113 2e-022
gb|AI993785.1|AI993785 701514536 A. thaliana, Ohio State cl... 109 3e-021
gb|BE520886.1|BE520886 M15E5STM Arabidopsis developing seed... 105 4e-020
gb|BE520887.1|BE520887 M15E5TTM Arabidopsis developing seed... 105 4e-020
emb|AX412751.1| Sequence 515 from Patent WO0222675 105 4e-020
emb|AX412752.1| Sequence 516 from Patent WO0222675 105 4e-020
gb|AY136411.1| Arabidopsis thaliana unknown protein (At2g36... 105 4e-020
emb|AX505642.1| Sequence 337 from Patent WO0216655 105 4e-020
emb|CQ804284.1| Sequence 695 from Patent WO2004035798 105 4e-020
ref|NM_129196.2| Arabidopsis thaliana SBE2.1 (STARCH BRANCH... 105 4e-020
gb|U18817.1|ATU18817 Arabidopsis thaliana starch branching ... 98 1e-017
gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O1... 94 2e-016
emb|AJ000497.1|ATSBE21 Arabidopsis thaliana Sbe2.1 gene 94 2e-016
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 94 2e-016
gb|N65726.1|N65726 20766 Lambda-PRL2 Arabidopsis thaliana c... 88 9e-015
dbj|AK117729.1| Arabidopsis thaliana At5g03650 mRNA for put... 82 6e-013
gb|AU238577.1|AU238577 AU238577 RAFL17 Arabidopsis thaliana... 78 9e-012
gb|BE526828.1|BE526828 M66D16STM Arabidopsis developing see... 72 6e-010
gb|B96915.1|B96915 T33J2TF TAMU Arabidopsis thaliana genomi... 70 2e-009
gb|H36370.1|H36370 14892 Lambda-PRL2 Arabidopsis thaliana c... 70 2e-009
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 70 2e-009
emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome... 70 2e-009
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 70 2e-009
gb|CB257388.1|CB257388 96-E012741-027-007-O23-T7R MPIZ-ADIS... 62 5e-007
gb|CK118027.1|CK118027 218k14.p1 AtM1 Arabidopsis thaliana ... 62 5e-007
dbj|AB024036.1| Arabidopsis thaliana genomic DNA, chromosom... 56 3e-005
dbj|AK118785.1| Arabidopsis thaliana At3g20440 mRNA for put... 56 3e-005
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 56 3e-005
ref|NM_112935.2| Arabidopsis thaliana EMB2729; alpha-amylas... 56 3e-005
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 56 3e-005
gb|AW004473.1|AW004473 701931727 A. thaliana, mixed source ... 54 1e-004
gb|AI997213.1|AI997213 701552717 A. thaliana, Columbia Col-... 46 0.032
gb|AV557312.1|AV557312 AV557312 Arabidopsis thaliana green ... 46 0.032
gb|BP787677.1|BP787677 BP787677 RAFL7 Arabidopsis thaliana ... 46 0.032
gb|BP790675.1|BP790675 BP790675 RAFL7 Arabidopsis thaliana ... 46 0.032
gb|BT002411.1| Arabidopsis thaliana pullulanase-like protei... 46 0.032
emb|BX841647.1|CNS09YHU Arabidopsis thaliana Full-length cD... 46 0.032
ref|NM_120518.3| Arabidopsis thaliana alpha-amylase/ hydrol... 46 0.032
gb|B25972.1|B25972 T3A3TR TAMU Arabidopsis thaliana genomic... 44 0.13
gb|BP784608.1|BP784608 BP784608 RAFL7 Arabidopsis thaliana ... 44 0.13
gb|BP790138.1|BP790138 BP790138 RAFL7 Arabidopsis thaliana ... 44 0.13
>gb|AV442128.1|AV442128 AV442128 Arabidopsis thaliana above-ground organ two to six-week
old Arabidopsis thaliana cDNA clone APZ36d06_r 5', mRNA
sequence
Length = 569
Score = 121 bits (61), Expect = 7e-025
Identities = 223/277 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| | ||
Sbjct: 376 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaagtaa 317
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 316 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 257
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatc 891
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 256 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccatt 197
Query: 892 aaccaaaacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagtt 951
||||| || ||||| || || || || || | |||||||| ||||||||||||||||
Sbjct: 196 aaccagaaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagag 137
Query: 952 acacacttctctaaccacctcctatttgtcagtgtgt 988
| |||||||||| ||||||| || || || |||||||
Sbjct: 136 atacacttctctgaccaccttctgttggtaagtgtgt 100
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 520 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 461
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 460 tccccaagatcaaatctgcggcggcatttgtcataactg 422
>gb|U22428.1|ATU22428 Arabidopsis thaliana starch branching enzyme class II mRNA (sbe2-2),
partial cds
Length = 2542
Score = 121 bits (61), Expect = 7e-025
Identities = 223/277 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| | ||
Sbjct: 1925 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaagtaa 1866
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 1865 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 1806
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatc 891
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 1805 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccatt 1746
Query: 892 aaccaaaacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagtt 951
||||| || ||||| || || || || || | |||||||| ||||||||||||||||
Sbjct: 1745 aaccagaaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagag 1686
Query: 952 acacacttctctaaccacctcctatttgtcagtgtgt 988
| |||||||||| ||||||| || || || |||||||
Sbjct: 1685 atacacttctctgaccaccttctgttggtaagtgtgt 1649
Score = 85.7 bits (43), Expect = 4e-014
Identities = 226/287 (78%)
Strand = Plus / Minus
Query: 1738 ggttccgggctactcattccgacatgtgtttcatatatccgcaatgattttggtcgttta 1797
||||||| ||||||||| || ||||||| |||||| |||| | || || |||| ||
Sbjct: 899 ggttccgtgctactcatgccaacatgtgcttcataaatccttagcgacttaggtctcttt 840
Query: 1798 ggttgcgcatgcctgaacacatactttacctcttcaggaggatcataataaatcccatca 1857
||||| | ||| |||| |||||||| ||||||| ||||||||||| || || ||||
Sbjct: 839 ggttgaggatgtttgaatacatacttctcctcttctggaggatcatagtatatgccattg 780
Query: 1858 tatggtatttctcctggggcctgcactgagtacttgatccaggctggaattgaatccttt 1917
|||| ||||| ||||| || ||||| ||| |||||||||| || |||||||| || ||
Sbjct: 779 aatgggatttcacctggagcttgcaccgagaacttgatccaagcaggaattgagtcttta 720
Query: 1918 atccctgatggagtatccattctcacctttacacgagatccatgaggaataggtgatgta 1977
|| || |||||||||||||| | | ||||||||| || ||||||||||| | | | |
Sbjct: 719 atgccagatggagtatccatacgaatctttacacgtgagccatgaggaattgcaggcgaa 660
Query: 1978 ccatctgcattgttaggcagaaaaatttcccaaacaccaaactcatt 2024
||||| | ||||| |||| ||| || |||||||||||||| |||||
Sbjct: 659 ccatcagtgttgttgggcaaaaagatctcccaaacaccaaattcatt 613
Score = 79.8 bits (40), Expect = 2e-012
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 1364 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 1305
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
|||||||| | ||||| || || ||| ||| ||| ||||||||| ||||||| || ||
Sbjct: 1304 agccaccaccgtgcatttgaaaggagatatcgtaatacttcccagctcccataattgaaa 1245
Query: 1393 aggcgagaatcccacatcca 1412
|| || ||||||||||||||
Sbjct: 1244 agtcgtgaatcccacatcca 1225
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 2069 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 2010
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 2009 tccccaagatcaaatctgcggcggcatttgtcataactg 1971
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 1111 aatgtaggcattccactaacatcttcaccaatggttacagcctcaggataaagtccatga 1170
||||| ||||| ||||||||||||||||||| ||| | || ||||| || || ||||||
Sbjct: 1526 aatgttggcataccactaacatcttcaccaacggtaatcgcttcagggtagagcccatga 1467
Query: 1171 attagatcatttaccagcat 1190
|| | |||||| ||||||||
Sbjct: 1466 atcatatcattaaccagcat 1447
>emb|AX506177.1| Sequence 872 from Patent WO0216655
Length = 2418
Score = 121 bits (61), Expect = 7e-025
Identities = 223/277 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| | ||
Sbjct: 1940 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaagtaa 1881
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 1880 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 1821
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatc 891
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 1820 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccatt 1761
Query: 892 aaccaaaacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagtt 951
||||| || ||||| || || || || || | |||||||| ||||||||||||||||
Sbjct: 1760 aaccagaaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagag 1701
Query: 952 acacacttctctaaccacctcctatttgtcagtgtgt 988
| |||||||||| ||||||| || || || |||||||
Sbjct: 1700 atacacttctctgaccaccttctgttggtaagtgtgt 1664
Score = 85.7 bits (43), Expect = 4e-014
Identities = 226/287 (78%)
Strand = Plus / Minus
Query: 1738 ggttccgggctactcattccgacatgtgtttcatatatccgcaatgattttggtcgttta 1797
||||||| ||||||||| || ||||||| |||||| |||| | || || |||| ||
Sbjct: 914 ggttccgtgctactcatgccaacatgtgcttcataaatccttagcgacttaggtctcttt 855
Query: 1798 ggttgcgcatgcctgaacacatactttacctcttcaggaggatcataataaatcccatca 1857
||||| | ||| |||| |||||||| ||||||| ||||||||||| || || ||||
Sbjct: 854 ggttgaggatgtttgaatacatacttctcctcttctggaggatcatagtatatgccattg 795
Query: 1858 tatggtatttctcctggggcctgcactgagtacttgatccaggctggaattgaatccttt 1917
|||| ||||| ||||| || ||||| ||| |||||||||| || |||||||| || ||
Sbjct: 794 aatgggatttcacctggagcttgcaccgagaacttgatccaagcaggaattgagtcttta 735
Query: 1918 atccctgatggagtatccattctcacctttacacgagatccatgaggaataggtgatgta 1977
|| || |||||||||||||| | | ||||||||| || ||||||||||| | | | |
Sbjct: 734 atgccagatggagtatccatacgaatctttacacgtgagccatgaggaattgcaggcgaa 675
Query: 1978 ccatctgcattgttaggcagaaaaatttcccaaacaccaaactcatt 2024
||||| | ||||| |||| ||| || |||||||||||||| |||||
Sbjct: 674 ccatcagtgttgttgggcaaaaagatctcccaaacaccaaattcatt 628
Score = 79.8 bits (40), Expect = 2e-012
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 1379 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 1320
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
|||||||| | ||||| || || ||| ||| ||| ||||||||| ||||||| || ||
Sbjct: 1319 agccaccaccgtgcatttgaaaggagatatcgtaatacttcccagctcccataattgaaa 1260
Query: 1393 aggcgagaatcccacatcca 1412
|| || ||||||||||||||
Sbjct: 1259 agtcgtgaatcccacatcca 1240
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 2084 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 2025
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 2024 tccccaagatcaaatctgcggcggcatttgtcataactg 1986
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 1111 aatgtaggcattccactaacatcttcaccaatggttacagcctcaggataaagtccatga 1170
||||| ||||| ||||||||||||||||||| ||| | || ||||| || || ||||||
Sbjct: 1541 aatgttggcataccactaacatcttcaccaacggtaatcgcttcagggtagagcccatga 1482
Query: 1171 attagatcatttaccagcat 1190
|| | |||||| ||||||||
Sbjct: 1481 atcatatcattaaccagcat 1462
>emb|AX651816.1| Sequence 672 from Patent WO03000898
Length = 2418
Score = 121 bits (61), Expect = 7e-025
Identities = 223/277 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| | ||
Sbjct: 1940 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaagtaa 1881
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 1880 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 1821
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatc 891
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 1820 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccatt 1761
Query: 892 aaccaaaacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagtt 951
||||| || ||||| || || || || || | |||||||| ||||||||||||||||
Sbjct: 1760 aaccagaaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagag 1701
Query: 952 acacacttctctaaccacctcctatttgtcagtgtgt 988
| |||||||||| ||||||| || || || |||||||
Sbjct: 1700 atacacttctctgaccaccttctgttggtaagtgtgt 1664
Score = 85.7 bits (43), Expect = 4e-014
Identities = 226/287 (78%)
Strand = Plus / Minus
Query: 1738 ggttccgggctactcattccgacatgtgtttcatatatccgcaatgattttggtcgttta 1797
||||||| ||||||||| || ||||||| |||||| |||| | || || |||| ||
Sbjct: 914 ggttccgtgctactcatgccaacatgtgcttcataaatccttagcgacttaggtctcttt 855
Query: 1798 ggttgcgcatgcctgaacacatactttacctcttcaggaggatcataataaatcccatca 1857
||||| | ||| |||| |||||||| ||||||| ||||||||||| || || ||||
Sbjct: 854 ggttgaggatgtttgaatacatacttctcctcttctggaggatcatagtatatgccattg 795
Query: 1858 tatggtatttctcctggggcctgcactgagtacttgatccaggctggaattgaatccttt 1917
|||| ||||| ||||| || ||||| ||| |||||||||| || |||||||| || ||
Sbjct: 794 aatgggatttcacctggagcttgcaccgagaacttgatccaagcaggaattgagtcttta 735
Query: 1918 atccctgatggagtatccattctcacctttacacgagatccatgaggaataggtgatgta 1977
|| || |||||||||||||| | | ||||||||| || ||||||||||| | | | |
Sbjct: 734 atgccagatggagtatccatacgaatctttacacgtgagccatgaggaattgcaggcgaa 675
Query: 1978 ccatctgcattgttaggcagaaaaatttcccaaacaccaaactcatt 2024
||||| | ||||| |||| ||| || |||||||||||||| |||||
Sbjct: 674 ccatcagtgttgttgggcaaaaagatctcccaaacaccaaattcatt 628
Score = 79.8 bits (40), Expect = 2e-012
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 1379 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 1320
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
|||||||| | ||||| || || ||| ||| ||| ||||||||| ||||||| || ||
Sbjct: 1319 agccaccaccgtgcatttgaaaggagatatcgtaatacttcccagctcccataattgaaa 1260
Query: 1393 aggcgagaatcccacatcca 1412
|| || ||||||||||||||
Sbjct: 1259 agtcgtgaatcccacatcca 1240
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 2084 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 2025
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 2024 tccccaagatcaaatctgcggcggcatttgtcataactg 1986
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 1111 aatgtaggcattccactaacatcttcaccaatggttacagcctcaggataaagtccatga 1170
||||| ||||| ||||||||||||||||||| ||| | || ||||| || || ||||||
Sbjct: 1541 aatgttggcataccactaacatcttcaccaacggtaatcgcttcagggtagagcccatga 1482
Query: 1171 attagatcatttaccagcat 1190
|| | |||||| ||||||||
Sbjct: 1481 atcatatcattaaccagcat 1462
>ref|NM_120446.2| Arabidopsis thaliana SBE2.2 (STARCH BRANCHING ENZYME 2.2) AT5G03650
(SBE2.2) mRNA, complete cds
Length = 2575
Score = 121 bits (61), Expect = 7e-025
Identities = 223/277 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| | ||
Sbjct: 1926 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaagtaa 1867
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 1866 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 1807
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatc 891
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 1806 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccatt 1747
Query: 892 aaccaaaacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagtt 951
||||| || ||||| || || || || || | |||||||| ||||||||||||||||
Sbjct: 1746 aaccagaaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagag 1687
Query: 952 acacacttctctaaccacctcctatttgtcagtgtgt 988
| |||||||||| ||||||| || || || |||||||
Sbjct: 1686 atacacttctctgaccaccttctgttggtaagtgtgt 1650
Score = 85.7 bits (43), Expect = 4e-014
Identities = 226/287 (78%)
Strand = Plus / Minus
Query: 1738 ggttccgggctactcattccgacatgtgtttcatatatccgcaatgattttggtcgttta 1797
||||||| ||||||||| || ||||||| |||||| |||| | || || |||| ||
Sbjct: 900 ggttccgtgctactcatgccaacatgtgcttcataaatccttagcgacttaggtctcttt 841
Query: 1798 ggttgcgcatgcctgaacacatactttacctcttcaggaggatcataataaatcccatca 1857
||||| | ||| |||| |||||||| ||||||| ||||||||||| || || ||||
Sbjct: 840 ggttgaggatgtttgaatacatacttctcctcttctggaggatcatagtatatgccattg 781
Query: 1858 tatggtatttctcctggggcctgcactgagtacttgatccaggctggaattgaatccttt 1917
|||| ||||| ||||| || ||||| ||| |||||||||| || |||||||| || ||
Sbjct: 780 aatgggatttcacctggagcttgcaccgagaacttgatccaagcaggaattgagtcttta 721
Query: 1918 atccctgatggagtatccattctcacctttacacgagatccatgaggaataggtgatgta 1977
|| || |||||||||||||| | | ||||||||| || ||||||||||| | | | |
Sbjct: 720 atgccagatggagtatccatacgaatctttacacgtgagccatgaggaattgcaggcgaa 661
Query: 1978 ccatctgcattgttaggcagaaaaatttcccaaacaccaaactcatt 2024
||||| | ||||| |||| ||| || |||||||||||||| |||||
Sbjct: 660 ccatcagtgttgttgggcaaaaagatctcccaaacaccaaattcatt 614
Score = 79.8 bits (40), Expect = 2e-012
Identities = 115/140 (82%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 1365 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 1306
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
|||||||| | ||||| || || ||| ||| ||| ||||||||| ||||||| || ||
Sbjct: 1305 agccaccaccgtgcatttgaaaggagatatcgtaatacttcccagctcccataattgaaa 1246
Query: 1393 aggcgagaatcccacatcca 1412
|| || ||||||||||||||
Sbjct: 1245 agtcgtgaatcccacatcca 1226
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 2070 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 2011
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 2010 tccccaagatcaaatctgcggcggcatttgtcataactg 1972
Score = 56.0 bits (28), Expect = 3e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 1111 aatgtaggcattccactaacatcttcaccaatggttacagcctcaggataaagtccatga 1170
||||| ||||| ||||||||||||||||||| ||| | || ||||| || || ||||||
Sbjct: 1527 aatgttggcataccactaacatcttcaccaacggtaatcgcttcagggtagagcccatga 1468
Query: 1171 attagatcatttaccagcat 1190
|| | |||||| ||||||||
Sbjct: 1467 atcatatcattaaccagcat 1448
>gb|N37134.1|N37134 18469 Lambda-PRL2 Arabidopsis thaliana cDNA clone 208D17T7, mRNA
sequence
Length = 491
Score = 113 bits (57), Expect = 2e-022
Identities = 222/277 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || || ||||| ||||| | ||
Sbjct: 303 cctctgggaaaatcaatccattctggatgtccgaattcgttccccataaaatttaagtaa 244
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 243 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 184
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatc 891
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||||
Sbjct: 183 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccatt 124
Query: 892 aaccaaaacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagtt 951
||||| || ||||| || || || || || | |||||||| ||||||||||||||||
Sbjct: 123 aaccagaaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagag 64
Query: 952 acacacttctctaaccacctcctatttgtcagtgtgt 988
| |||||||||| ||||||| || || || |||||||
Sbjct: 63 atacacttctctgaccaccttctgttggtaagtgtgt 27
>gb|AI993785.1|AI993785 701514536 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701514536, mRNA sequence
Length = 601
Score = 109 bits (55), Expect = 3e-021
Identities = 217/271 (80%)
Strand = Plus / Minus
Query: 718 ggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatagccctct 777
|||||||| | |||||| ||||| || || || |||||||| ||||| | || || ||
Sbjct: 450 ggaaaatcaagccattctggatgcccgaattcgtttcccataaaatttaagtaaccttca 391
Query: 778 cctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacgatcaatg 837
|| ||||| ||||| || ||||| |||||||| || || || ||||| || | ||| ||
Sbjct: 390 ccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctctatcgata 331
Query: 838 gtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtccatcaaccaa 897
||||||||| ||||| || | ||||||||||||||||||||||||||||| |||||
Sbjct: 330 agaggagttgatggtctgtctactgccatgaaatcatacatatccttgtccattaaccag 271
Query: 898 aacgcaatagtcttgtcgccgactaatgcttgatcatgactttcagcataagttacacac 957
|| ||||| || || || || || | |||||||| |||||||||||||||| | ||||
Sbjct: 270 aaggcaattgttttatcaccaacaagagcttgatcgtgactttcagcataagagatacac 211
Query: 958 ttctctaaccacctcctatttgtcagtgtgt 988
|||||| ||||||| ||||| || |||||||
Sbjct: 210 ttctctgaccaccttctattggtaagtgtgt 180
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1111 aatgtaggcattccactaacatcttcaccaa 1141
||||| ||||| |||||||||||||||||||
Sbjct: 57 aatgttggcataccactaacatcttcaccaa 27
>gb|BE520886.1|BE520886 M15E5STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M15E5 5', mRNA sequence
Length = 280
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 149 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 90
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 89 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 30
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 29 agacgagaatcccacatccaatgat 5
>gb|BE520887.1|BE520887 M15E5TTM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
M15E5 3', mRNA sequence
Length = 326
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 160 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 101
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 100 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 41
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 40 agacgagaatcccacatccaatgat 16
>emb|AX412751.1| Sequence 515 from Patent WO0222675
Length = 2577
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1484 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1425
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1424 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1365
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 1364 agacgagaatcccacatccaatgat 1340
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1052 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 993
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 992 gattcatatatacgca 977
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2186 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2127
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 2126 cccagatcaaacctacgtcggcatttatcataact 2092
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 931 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 872
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 871 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 812
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 811 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 752
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 751 cccacacaccaaa 739
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1906 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1847
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1846 tgtctccaacaagggcttgatcatgactctctgcata 1810
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2336 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2290
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2030 atccattctgggtgtccaaattcgtttcccatgaaatt 1993
>emb|AX412752.1| Sequence 516 from Patent WO0222675
Length = 2577
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1484 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1425
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1424 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1365
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 1364 agacgagaatcccacatccaatgat 1340
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1052 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 993
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 992 gattcatatatacgca 977
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2186 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2127
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 2126 cccagatcaaacctacgtcggcatttatcataact 2092
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 931 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 872
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 871 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 812
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 811 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 752
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 751 cccacacaccaaa 739
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1906 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1847
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1846 tgtctccaacaagggcttgatcatgactctctgcata 1810
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2336 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2290
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2030 atccattctgggtgtccaaattcgtttcccatgaaatt 1993
>gb|AY136411.1| Arabidopsis thaliana unknown protein (At2g36390) mRNA, complete cds
Length = 2759
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1530 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1471
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1470 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1411
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 1410 agacgagaatcccacatccaatgat 1386
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1098 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 1039
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 1038 gattcatatatacgca 1023
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2232 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2173
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 2172 cccagatcaaacctacgtcggcatttatcataact 2138
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 977 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 918
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 917 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 858
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 857 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 798
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 797 cccacacaccaaa 785
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1952 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1893
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1892 tgtctccaacaagggcttgatcatgactctctgcata 1856
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2382 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2336
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2076 atccattctgggtgtccaaattcgtttcccatgaaatt 2039
>emb|AX505642.1| Sequence 337 from Patent WO0216655
Length = 2577
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1484 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1425
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1424 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1365
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 1364 agacgagaatcccacatccaatgat 1340
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1052 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 993
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 992 gattcatatatacgca 977
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2186 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2127
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 2126 cccagatcaaacctacgtcggcatttatcataact 2092
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 931 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 872
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 871 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 812
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 811 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 752
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 751 cccacacaccaaa 739
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1906 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1847
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1846 tgtctccaacaagggcttgatcatgactctctgcata 1810
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2336 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2290
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2030 atccattctgggtgtccaaattcgtttcccatgaaatt 1993
>emb|CQ804284.1| Sequence 695 from Patent WO2004035798
Length = 2577
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1484 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1425
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1424 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1365
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 1364 agacgagaatcccacatccaatgat 1340
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1052 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 993
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 992 gattcatatatacgca 977
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2186 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2127
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 2126 cccagatcaaacctacgtcggcatttatcataact 2092
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 931 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 872
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 871 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 812
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 811 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 752
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 751 cccacacaccaaa 739
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1906 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1847
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1846 tgtctccaacaagggcttgatcatgactctctgcata 1810
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2336 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2290
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2030 atccattctgggtgtccaaattcgtttcccatgaaatt 1993
>ref|NM_129196.2| Arabidopsis thaliana SBE2.1 (STARCH BRANCHING ENZYME 2.1) AT2G36390
(SBE2.1) mRNA, complete cds
Length = 2768
Score = 105 bits (53), Expect = 4e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1530 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1471
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1470 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1411
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| ||||||||||||||||| ||||
Sbjct: 1410 agacgagaatcccacatccaatgat 1386
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1098 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 1039
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 1038 gattcatatatacgca 1023
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2232 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2173
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 2172 cccagatcaaacctacgtcggcatttatcataact 2138
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 977 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 918
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 917 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 858
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 857 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 798
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 797 cccacacaccaaa 785
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1952 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1893
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1892 tgtctccaacaagggcttgatcatgactctctgcata 1856
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2382 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2336
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2076 atccattctgggtgtccaaattcgtttcccatgaaatt 2039
>gb|U18817.1|ATU18817 Arabidopsis thaliana starch branching enzyme class II (sbe2-1) mRNA,
partial cds
Length = 2668
Score = 97.6 bits (49), Expect = 1e-017
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 1472 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 1413
Query: 1333 agccaccatctagcattggagagaagaaatcttaaaacttcccagttcccatagttaaat 1392
||||||||||| || ||||| |||||| | || | ||||||||| | || || || ||
Sbjct: 1412 agccaccatctcgcgttggaaagaagatacctaagcacttcccagcttccgtaattgaaa 1353
Query: 1393 aggcgagaatcccacatccagtgat 1417
|| |||| |||||||||||| ||||
Sbjct: 1352 agacgagtatcccacatccaatgat 1328
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1040 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 981
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 980 gattcatatatacgca 965
Score = 58.0 bits (29), Expect = 8e-006
Identities = 152/193 (78%)
Strand = Plus / Minus
Query: 1826 cctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcactg 1885
|||| |||||||| |||||||| | |||| |||||| || || || || | ||| || |
Sbjct: 919 cctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggacag 860
Query: 1886 agtacttgatccaggctggaattgaatcctttatccctgatggagtatccattctcacct 1945
| ||||||||||| |||||||| || || || || || ||||| |||||||| | | ||
Sbjct: 859 aatacttgatccaagctggaatggagtctttaataccagatggggtatccatgcggatct 800
Query: 1946 ttacacgagatccatgaggaataggtgatgtaccatctgcattgttaggcagaaaaattt 2005
| ||||| || ||||| ||||| | || || ||||| ||||| || |||||||| ||||
Sbjct: 799 tcacacgggagccatggggaattgctggtgagccatcagcattatttggcagaaatattt 740
Query: 2006 cccaaacaccaaa 2018
|||| ||||||||
Sbjct: 739 cccacacaccaaa 727
Score = 54.0 bits (27), Expect = 1e-004
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 2174 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 2115
Query: 631 cccaggtcaaa 641
||||| |||||
Sbjct: 2114 cccagatcaaa 2104
Score = 50.1 bits (25), Expect = 0.002
Identities = 79/97 (81%)
Strand = Plus / Minus
Query: 851 gtctatcgagggccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtct 910
||||||| | |||||||||||||||||| ||||| ||||| | ||| || || || || |
Sbjct: 1894 gtctatcaacggccatgaaatcatacatgtccttatccattagccagaaagctatcgttt 1835
Query: 911 tgtcgccgactaatgcttgatcatgactttcagcata 947
|||| || || | |||||||||||||| || |||||
Sbjct: 1834 tgtctccaacaagggcttgatcatgactctctgcata 1798
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 2324 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 2278
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 2018 atccattctgggtgtccaaattcgtttcccatgaaatt 1981
>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete
sequence
Length = 104364
Score = 93.7 bits (47), Expect = 2e-016
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 17387 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 17328
Query: 1333 agccaccatctagcattggagagaaga 1359
||||||||||| || ||||| ||||||
Sbjct: 17327 agccaccatctcgcgttggaaagaaga 17301
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 18513 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 18454
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 18453 cccagatcaaacctacgtcggcatttatcataact 18419
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 18663 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 18617
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 18357 atccattctgggtgtccaaattcgtttcccatgaaatt 18320
Score = 44.1 bits (22), Expect = 0.13
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1747 ctactcattccgacatgtgtttcatatatccgca 1780
||||||||||| ||||||| ||||||||| ||||
Sbjct: 16198 ctactcattccaacatgtgattcatatatacgca 16165
Score = 44.1 bits (22), Expect = 0.13
Identities = 91/114 (79%)
Strand = Plus / Minus
Query: 1824 tacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcac 1883
|||||| |||||||| |||||||| | |||| |||||| || || || || | ||| ||
Sbjct: 15906 tacctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggac 15847
Query: 1884 tgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
|| ||||||||||| |||||||| || || || || || ||||| ||||||||
Sbjct: 15846 agaatacttgatccaagctggaatggagtctttaataccagatggggtatccat 15793
>emb|AJ000497.1|ATSBE21 Arabidopsis thaliana Sbe2.1 gene
Length = 7020
Score = 93.7 bits (47), Expect = 2e-016
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 5062 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 5003
Query: 1333 agccaccatctagcattggagagaaga 1359
||||||||||| || ||||| ||||||
Sbjct: 5002 agccaccatctcgcgttggaaagaaga 4976
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 6188 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 6129
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 6128 cccagatcaaacctacgtcggcatttatcataact 6094
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 6338 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 6292
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 6032 atccattctgggtgtccaaattcgtttcccatgaaatt 5995
Score = 44.1 bits (22), Expect = 0.13
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1747 ctactcattccgacatgtgtttcatatatccgca 1780
||||||||||| ||||||| ||||||||| ||||
Sbjct: 3872 ctactcattccaacatgtgattcatatatacgca 3839
Score = 44.1 bits (22), Expect = 0.13
Identities = 91/114 (79%)
Strand = Plus / Minus
Query: 1824 tacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcac 1883
|||||| |||||||| |||||||| | |||| |||||| || || || || | ||| ||
Sbjct: 3580 tacctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggac 3521
Query: 1884 tgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
|| ||||||||||| |||||||| || || || || || ||||| ||||||||
Sbjct: 3520 agaatacttgatccaagctggaatggagtctttaataccagatggggtatccat 3467
>ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complete sequence
Length = 19705359
Score = 93.7 bits (47), Expect = 2e-016
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||||||||||||||| |||||||||||||| | ||| ||||||||||| ||||| ||
Sbjct: 15275418 tgagtgtacatcatggaagtcacaccatcaaatctgaacccatcaaacttgtattcttcc 15275359
Query: 1333 agccaccatctagcattggagagaaga 1359
||||||||||| || ||||| ||||||
Sbjct: 15275358 agccaccatctcgcgttggaaagaaga 15275332
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 15276544 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 15276485
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 15276484 cccagatcaaacctacgtcggcatttatcataact 15276450
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 15276694 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 15276648
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 15276388 atccattctgggtgtccaaattcgtttcccatgaaatt 15276351
Score = 44.1 bits (22), Expect = 0.13
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1747 ctactcattccgacatgtgtttcatatatccgca 1780
||||||||||| ||||||| ||||||||| ||||
Sbjct: 15274229 ctactcattccaacatgtgattcatatatacgca 15274196
Score = 44.1 bits (22), Expect = 0.13
Identities = 91/114 (79%)
Strand = Plus / Minus
Query: 1824 tacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcac 1883
|||||| |||||||| |||||||| | |||| |||||| || || || || | ||| ||
Sbjct: 15273937 tacctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggac 15273878
Query: 1884 tgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
|| ||||||||||| |||||||| || || || || || ||||| ||||||||
Sbjct: 15273877 agaatacttgatccaagctggaatggagtctttaataccagatggggtatccat 15273824
>gb|N65726.1|N65726 20766 Lambda-PRL2 Arabidopsis thaliana cDNA clone 230L2T7, mRNA
sequence
Length = 501
Score = 87.7 bits (44), Expect = 9e-015
Identities = 106/127 (83%)
Strand = Plus / Minus
Query: 862 gccatgaaatcatacatatccttgtccatcaaccaaaacgcaatagtcttgtcgccgact 921
||||||||||||||||||||| ||||||| ||||| || ||||| || || || || ||
Sbjct: 307 gccatgaaatcatacatatccntgtccattaaccagaaggcaattgttttatcaccaaca 248
Query: 922 aatgcttgatcatgactttcagcataagttacacacttctctaaccacctcctatttgtc 981
| |||||||| |||||||||||||||| | |||||||||| ||||||| || || ||
Sbjct: 247 agagcttgatcgtgactttcagcataagagatacacttctctgaccaccttctgttggta 188
Query: 982 agtgtgt 988
|||||||
Sbjct: 187 agtgtgt 181
Score = 46.1 bits (23), Expect = 0.032
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1111 aatgtaggcattccactaacatcttcaccaa 1141
||||| ||||| |||||||||||||||||||
Sbjct: 58 aatgttggcataccactaacatcttcaccaa 28
>dbj|AK117729.1| Arabidopsis thaliana At5g03650 mRNA for putative 1,4-alpha-glucan
branching enzyme protein soform SBE2.2, complete cds,
clone: RAFL17-40-N21
Length = 825
Score = 81.8 bits (41), Expect = 6e-013
Identities = 143/177 (80%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaattaagatag 771
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| | ||
Sbjct: 177 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaagtaa 118
Query: 772 ccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacga 831
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || | |
Sbjct: 117 ccttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctcta 58
Query: 832 tcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtcc 888
|| || ||||||||| ||||| || | |||||||||||||||||||||||||||
Sbjct: 57 tcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtcc 1
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 321 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 262
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 261 tccccaagatcaaatctgcggcggcatttgtcataactg 223
>gb|AU238577.1|AU238577 AU238577 RAFL17 Arabidopsis thaliana cDNA clone RAFL17-40-N21 5',
mRNA sequence
Length = 646
Score = 77.8 bits (39), Expect = 9e-012
Identities = 144/178 (80%), Gaps = 1/178 (0%)
Strand = Plus / Minus
Query: 712 cctcttggaaaatctatccattcaggatgtccaaactcatttcccatgaaatt-aagata 770
||||| |||||||| |||||||| |||||||| || || |||||||| ||||| || ||
Sbjct: 178 cctctgggaaaatcaatccattctggatgtccgaattcgtttcccataaaatttaangta 119
Query: 771 gccctctcctcctaaacccattgtgataagtctaatcatcttatgtaatgctatcccacg 830
|| || || ||||| ||||| || ||||| |||||||| || || || ||||| || |
Sbjct: 118 accttcaccgcctaatcccatagttataagcctaatcattttgtgcaaagctattcctct 59
Query: 831 atcaatggtaggagttgaaggtctatcgagggccatgaaatcatacatatccttgtcc 888
||| || ||||||||| ||||| || | |||||||||||||||||||||||||||
Sbjct: 58 atcgataagaggagttgatggtctgtctactgccatgaaatcatacatatccttgtcc 1
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 322 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 263
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 262 tccccaagatcaaatctgcggcggcatttgtcataactg 224
>gb|BE526828.1|BE526828 M66D16STM Arabidopsis developing seed Arabidopsis thaliana cDNA clone
600035558R1 5', mRNA sequence
Length = 248
Score = 71.9 bits (36), Expect = 6e-010
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1705 tcatccctaaagtttacatatgtgtttatcttcggttccgggctactcattccgacatgt 1764
||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 231 tcatctctaaagttggcatatgtatttatctttggttccgtactactcattccaacatgt 172
Query: 1765 gtttcatatatccgca 1780
| ||||||||| ||||
Sbjct: 171 gattcatatatacgca 156
>gb|B96915.1|B96915 T33J2TF TAMU Arabidopsis thaliana genomic clone T33J2, DNA sequence
Length = 359
Score = 69.9 bits (35), Expect = 2e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 1823 ttacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgca 1882
|||||||||| ||||||||||| || || |||| |||| ||||| ||||| || ||||
Sbjct: 174 ttacctcttctggaggatcatagtatatgccattgaatgggatttcacctggagcttgca 115
Query: 1883 ctgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
| ||| |||||||||| || |||||||| || || || || ||||||||||||||
Sbjct: 114 ccgagaacttgatccaagcaggaattgagtctttaatgccagatggagtatccat 60
>gb|H36370.1|H36370 14892 Lambda-PRL2 Arabidopsis thaliana cDNA clone 178K2T7, mRNA
sequence
Length = 484
Score = 69.9 bits (35), Expect = 2e-009
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgca 627
|||||||||||||||||||||||||| ||||| | || | || || ||||| ||||||
Sbjct: 275 tcaagatgttgcattgcctgatcaaattcttgtagtccgcggtatctgagataatctgca 216
Query: 628 tcacccaggtcaaatcttcgacgacatttgtcataactg 666
|| || || |||||||| || || |||||||||||||||
Sbjct: 215 tccccaagatcaaatctgcggcggcatttgtcataactg 177
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 69.9 bits (35), Expect = 2e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 1823 ttacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgca 1882
|||||||||| ||||||||||| || || |||| |||| ||||| ||||| || ||||
Sbjct: 933779 ttacctcttctggaggatcatagtatatgccattgaatgggatttcacctggagcttgca 933720
Query: 1883 ctgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
| ||| |||||||||| || |||||||| || || || || ||||||||||||||
Sbjct: 933719 ccgagaacttgatccaagcaggaattgagtctttaatgccagatggagtatccat 933665
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttg 599
|||||||||||||||||||||||||| |||||
Sbjct: 936437 tcaagatgttgcattgcctgatcaaattcttg 936406
Score = 56.0 bits (28), Expect = 3e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 925 gcttgatcatgactttcagcataagttacacacttctctaaccacctcctatttgtcagt 984
|||||||| |||||||||||||||| | |||||||||| ||||||| || || || |||
Sbjct: 935834 gcttgatcgtgactttcagcataagagatacacttctctgaccaccttctgttggtaagt 935775
Query: 985 gtgt 988
||||
Sbjct: 935774 gtgt 935771
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 935099 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 935040
Query: 1333 agccacca 1340
||||||||
Sbjct: 935039 agccacca 935032
Score = 48.1 bits (24), Expect = 0.008
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 840 aggagttgaaggtctatcgagggccatgaaatcatacatatcct 883
||||||||| ||||| || | ||||||||||||||||||||||
Sbjct: 935995 aggagttgatggtctgtctactgccatgaaatcatacatatcct 935952
>emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome 5, BAC clone F17C15 (ESSA project)
Length = 102897
Score = 69.9 bits (35), Expect = 2e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 1823 ttacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgca 1882
|||||||||| ||||||||||| || || |||| |||| ||||| ||||| || ||||
Sbjct: 29482 ttacctcttctggaggatcatagtatatgccattgaatgggatttcacctggagcttgca 29423
Query: 1883 ctgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
| ||| |||||||||| || |||||||| || || || || ||||||||||||||
Sbjct: 29422 ccgagaacttgatccaagcaggaattgagtctttaatgccagatggagtatccat 29368
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttg 599
|||||||||||||||||||||||||| |||||
Sbjct: 32140 tcaagatgttgcattgcctgatcaaattcttg 32109
Score = 56.0 bits (28), Expect = 3e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 925 gcttgatcatgactttcagcataagttacacacttctctaaccacctcctatttgtcagt 984
|||||||| |||||||||||||||| | |||||||||| ||||||| || || || |||
Sbjct: 31537 gcttgatcgtgactttcagcataagagatacacttctctgaccaccttctgttggtaagt 31478
Query: 985 gtgt 988
||||
Sbjct: 31477 gtgt 31474
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 30802 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 30743
Query: 1333 agccacca 1340
||||||||
Sbjct: 30742 agccacca 30735
Score = 48.1 bits (24), Expect = 0.008
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 840 aggagttgaaggtctatcgagggccatgaaatcatacatatcct 883
||||||||| ||||| || | ||||||||||||||||||||||
Sbjct: 31698 aggagttgatggtctgtctactgccatgaaatcatacatatcct 31655
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 69.9 bits (35), Expect = 2e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 1823 ttacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgca 1882
|||||||||| ||||||||||| || || |||| |||| ||||| ||||| || ||||
Sbjct: 934222 ttacctcttctggaggatcatagtatatgccattgaatgggatttcacctggagcttgca 934163
Query: 1883 ctgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
| ||| |||||||||| || |||||||| || || || || ||||||||||||||
Sbjct: 934162 ccgagaacttgatccaagcaggaattgagtctttaatgccagatggagtatccat 934108
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 568 tcaagatgttgcattgcctgatcaaactcttg 599
|||||||||||||||||||||||||| |||||
Sbjct: 936880 tcaagatgttgcattgcctgatcaaattcttg 936849
Score = 56.0 bits (28), Expect = 3e-005
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 925 gcttgatcatgactttcagcataagttacacacttctctaaccacctcctatttgtcagt 984
|||||||| |||||||||||||||| | |||||||||| ||||||| || || || |||
Sbjct: 936277 gcttgatcgtgactttcagcataagagatacacttctctgaccaccttctgttggtaagt 936218
Query: 985 gtgt 988
||||
Sbjct: 936217 gtgt 936214
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 1273 tgagtgtacatcatggaggtcacaccatcaaaacggaaaccatcaaacttatattcctcg 1332
||||| |||||||| ||||| ||||||||||| | || ||||||||||| ||||| ||
Sbjct: 935542 tgagtatacatcattgaggttacaccatcaaatctaaatccatcaaacttgtattcttct 935483
Query: 1333 agccacca 1340
||||||||
Sbjct: 935482 agccacca 935475
Score = 48.1 bits (24), Expect = 0.008
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 840 aggagttgaaggtctatcgagggccatgaaatcatacatatcct 883
||||||||| ||||| || | ||||||||||||||||||||||
Sbjct: 936438 aggagttgatggtctgtctactgccatgaaatcatacatatcct 936395
>gb|CB257388.1|CB257388 96-E012741-027-007-O23-T7R MPIZ-ADIS-027 Arabidopsis thaliana cDNA
clone MPIZp772O237Q 5-PRIME, mRNA sequence
Length = 621
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 406 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 347
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 346 cccagatcaaacctacgtcggcatttatcataact 312
Score = 44.1 bits (22), Expect = 0.13
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 727 atccattcaggatgtccaaactcatttcccatgaaatt 764
|||||||| || |||||||| || ||||||||||||||
Sbjct: 250 atccattctgggtgtccaaattcgtttcccatgaaatt 213
>gb|CK118027.1|CK118027 218k14.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011K14218
5-PRIME, mRNA sequence
Length = 690
Score = 61.9 bits (31), Expect = 5e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 166 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 107
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| ||||| || || || ||||| ||||||||
Sbjct: 106 cccagatcaaacctacgtcggcatttatcataact 72
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 316 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 270
>dbj|AB024036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC12
Length = 87799
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 733 tcaggatgtccaaactcatttcccatgaaatt 764
|||||||||||||| |||||||||||||||||
Sbjct: 62186 tcaggatgtccaaattcatttcccatgaaatt 62217
>dbj|AK118785.1| Arabidopsis thaliana At3g20440 mRNA for putative 1,4-alpha-glucan
branching enzyme, complete cds, clone: RAFL21-11-O08
Length = 3089
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 733 tcaggatgtccaaactcatttcccatgaaatt 764
|||||||||||||| |||||||||||||||||
Sbjct: 2213 tcaggatgtccaaattcatttcccatgaaatt 2182
>dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complete sequence
Length = 23403063
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 733 tcaggatgtccaaactcatttcccatgaaatt 764
|||||||||||||| |||||||||||||||||
Sbjct: 7079785 tcaggatgtccaaattcatttcccatgaaatt 7079816
>ref|NM_112935.2| Arabidopsis thaliana EMB2729; alpha-amylase AT3G20440 (EMB2729) mRNA,
complete cds
Length = 3088
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 733 tcaggatgtccaaactcatttcccatgaaatt 764
|||||||||||||| |||||||||||||||||
Sbjct: 2213 tcaggatgtccaaattcatttcccatgaaatt 2182
>ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complete sequence
Length = 23470805
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 733 tcaggatgtccaaactcatttcccatgaaatt 764
|||||||||||||| |||||||||||||||||
Sbjct: 7125227 tcaggatgtccaaattcatttcccatgaaatt 7125258
>gb|AW004473.1|AW004473 701931727 A. thaliana, mixed source Arabidopsis thaliana cDNA clone
701931727, mRNA sequence
Length = 459
Score = 54.0 bits (27), Expect = 1e-004
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 571 agatgttgcattgcctgatcaaactcttgcataccatgatacctaagatagtctgcatca 630
|||| ||||||||| ||||||||||||| | ||||| || |||||||| ||||||||
Sbjct: 326 agattttgcattgctcgatcaaactcttgtagtccatggtatctaagatattctgcatct 385
Query: 631 cccaggtcaaatcttcgacgacatttgtcataact 665
||||| || || || || || ||||| ||||||||
Sbjct: 386 cccagatcgaacctacgtcggcatttatcataact 420
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 176 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 222
>gb|AI997213.1|AI997213 701552717 A. thaliana, Columbia Col-0, root-2 Arabidopsis thaliana
cDNA clone 701552717, mRNA sequence
Length = 446
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 360 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 406
>gb|AV557312.1|AV557312 AV557312 Arabidopsis thaliana green siliques Columbia Arabidopsis
thaliana cDNA clone SQ065d01F 3', mRNA sequence
Length = 431
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 384 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 430
>gb|BP787677.1|BP787677 BP787677 RAFL7 Arabidopsis thaliana cDNA clone RAFL26-05-D13 3',
mRNA sequence
Length = 387
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 305 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 351
>gb|BP790675.1|BP790675 BP790675 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-44-E05 3',
mRNA sequence
Length = 439
Score = 46.1 bits (23), Expect = 0.032
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttgaa 467
||||| |||||||||||| | || |||||| | ||||||||||||||
Sbjct: 380 caaccgatacggtagtcagagtaactgttggtccagtggaagttgaa 426
>gb|BT002411.1| Arabidopsis thaliana pullulanase-like protein (starch debranching
enzyme) (At5g04360) mRNA, complete cds
Length = 3039
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1299 atcaaaacggaaaccatcaaacttata 1325
|||||||||||||||||||| ||||||
Sbjct: 1692 atcaaaacggaaaccatcaaccttata 1666
>emb|BX841647.1|CNS09YHU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS27ZA05 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 1463
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1299 atcaaaacggaaaccatcaaacttata 1325
|||||||||||||||||||| ||||||
Sbjct: 171 atcaaaacggaaaccatcaaccttata 145
>ref|NM_120518.3| Arabidopsis thaliana alpha-amylase/ hydrolase, hydrolyzing O-glycosyl
compounds AT5G04360 mRNA, complete cds
Length = 3146
Score = 46.1 bits (23), Expect = 0.032
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1299 atcaaaacggaaaccatcaaacttata 1325
|||||||||||||||||||| ||||||
Sbjct: 1692 atcaaaacggaaaccatcaaccttata 1666
>gb|B25972.1|B25972 T3A3TR TAMU Arabidopsis thaliana genomic clone T3A3, DNA sequence
Length = 247
Score = 44.1 bits (22), Expect = 0.13
Identities = 91/114 (79%)
Strand = Plus / Minus
Query: 1824 tacctcttcaggaggatcataataaatcccatcatatggtatttctcctggggcctgcac 1883
|||||| |||||||| |||||||| | |||| |||||| || || || || | ||| ||
Sbjct: 171 tacctcctcaggagggtcataatatactccattatatgggatctcgccaggtggctggac 112
Query: 1884 tgagtacttgatccaggctggaattgaatcctttatccctgatggagtatccat 1937
|| ||||||||||| |||||||| || || || || || ||||| ||||||||
Sbjct: 111 agaatacttgatccaagctggaatggagtctttaataccagatggggtatccat 58
>gb|BP784608.1|BP784608 BP784608 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-91-H16 3',
mRNA sequence
Length = 430
Score = 44.1 bits (22), Expect = 0.13
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttga 466
||||| |||||||||||| | || |||||| | |||||||||||||
Sbjct: 385 caaccgatacggtagtcagagtaactgttggtccagtggaagttga 430
>gb|BP790138.1|BP790138 BP790138 RAFL7 Arabidopsis thaliana cDNA clone RAFL07-41-O14 3',
mRNA sequence
Length = 427
Score = 44.1 bits (22), Expect = 0.13
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 421 caaccaatacggtagtcaaaatagctgttgttgcagtggaagttga 466
||||| |||||||||||| | || |||||| | |||||||||||||
Sbjct: 382 caaccgatacggtagtcagagtaactgttggtccagtggaagttga 427
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,263,371
Number of Sequences: 1013581
Number of extensions: 1263371
Number of successful extensions: 89300
Number of sequences better than 0.5: 46
Number of HSP's better than 0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 86396
Number of HSP's gapped (non-prelim): 2880
length of query: 2729
length of database: 908,940,872
effective HSP length: 21
effective length of query: 2708
effective length of database: 887,655,671
effective search space: 2403771557068
effective search space used: 2403771557068
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)