BLASTX 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804918.2.4
(634 letters)
Database: /db/trembl-ebi/tmp/swall
1,272,877 sequences; 406,886,216 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sptrnew|CAE03942|CAE03942 OSJNBa0093F12.16 protein. 287 8e-77
sw|O50003|RL12_PRUAR 60S ribosomal protein L12. 272 2e-72
sptrnew|AAM64365|AAM64365 60S ribosomal protein L12. 268 3e-71
sptrnew|AAO11589|AAO11589 At2g37190/T2N18.5. 268 3e-71
sptrnew|AAK49612|AAK49612 At2g37190/T2N18.5. 268 3e-71
sw|P50883|RL12_ARATH 60S ribosomal protein L12. 268 3e-71
sptr|Q9FF52|Q9FF52 60S ribosomal protein L12 (AT5g60670/mup24_80). 268 4e-71
sptr|Q9LFH5|Q9LFH5 60S ribosomal protein L12-like protein. 267 7e-71
sw|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment). 239 2e-62
sw|O75000|RL12_SCHPO 60S ribosomal protein L12. 234 5e-61
sptr|Q9ZSL1|Q9ZSL1 Ribosomal protein L12 (Fragment). 234 6e-61
sptr|Q8AVW0|Q8AVW0 Similar to ribosomal protein L12. 221 4e-57
sptrnew|EAA13967|EAA13967 AgCP8207 (Fragment). 219 2e-56
sw|P35979|RL12_MOUSE 60S ribosomal protein L12. 219 3e-56
sw|P30050|RL12_HUMAN 60S ribosomal protein L12. 219 3e-56
sw|P23358|RL12_RAT 60S ribosomal protein L12. 218 6e-56
sptrnew|AAM68299|AAM68299 CG3195-PA (CG3195-PB). 217 1e-55
sptr|Q9W1B9|Q9W1B9 RE28824p. 217 1e-55
sptr|Q7ZUG1|Q7ZUG1 Similar to ribosomal protein L12. 216 2e-55
sptrnew|EAA32167|EAA32167 Hypothetical protein. 215 3e-55
sw|Q9C285|RL12_NEUCR 60S ribosomal protein L12. 215 3e-55
sptr|Q95V38|Q95V38 Ribosomal protein L12. 214 9e-55
sw|O62290|RL12_CAEEL 60S ribosomal protein L12. 213 1e-54
sptr|Q9NQ02|Q9NQ02 DJ999L4.1 (Novel protein similar to ribosomal... 213 2e-54
sptr|Q90YV6|Q90YV6 Ribosomal protein L12. 213 2e-54
sptr|Q8C2K0|Q8C2K0 Ribosomal protein L12. 212 3e-54
sptr|Q9NFW1|Q9NFW1 L12 ribosomal protein. 212 3e-54
sptr|Q8ITA1|Q8ITA1 Ribosomal protein L12. 206 2e-52
sptr|Q8I3T8|Q8I3T8 60S ribosomal protein L12, putative. 205 3e-52
sptrnew|CAA16156|CAA16156 CICK0721Q.2 (60S Ribosomal Protein L12... 204 7e-52
>sptrnew|CAE03942|CAE03942 OSJNBa0093F12.16 protein.
Length = 166
Score = 287 bits (734), Expect = 8e-77
Identities = 147/151 (97%), Positives = 149/151 (98%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIA+ MRNRSMAKE+AGTVKEILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIARIMRNRSMAKEMAGTVKEILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
TCVSVGCTVDGKDPKDLQQEI DGEVEIPSA
Sbjct: 136 TCVSVGCTVDGKDPKDLQQEISDGEVEIPSA 166
>sw|O50003|RL12_PRUAR 60S ribosomal protein L12.
Length = 166
Score = 272 bits (696), Expect = 2e-72
Identities = 140/149 (93%), Positives = 144/149 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVTVKLTVQNRQAKVSVV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVTVKLTVQNRQAKVSVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKK KNIKHSG+ISLDDVIEIAK M++RSMAKELAGTVKEIL
Sbjct: 76 PSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHRSMAKELAGTVKEILR 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TCVSVGCTVDGKDPKDLQQEI DG+VEIP
Sbjct: 136 TCVSVGCTVDGKDPKDLQQEIADGDVEIP 164
>sptrnew|AAM64365|AAM64365 60S ribosomal protein L12.
Length = 166
Score = 268 bits (686), Expect = 3e-71
Identities = 135/149 (90%), Positives = 144/149 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV+VV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIA+ MR RS+AKEL+GTV+EILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 136 TCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptrnew|AAO11589|AAO11589 At2g37190/T2N18.5.
Length = 166
Score = 268 bits (686), Expect = 3e-71
Identities = 135/149 (90%), Positives = 144/149 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV+VV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIA+ MR RS+AKEL+GTV+EILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 136 TCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptrnew|AAK49612|AAK49612 At2g37190/T2N18.5.
Length = 166
Score = 268 bits (686), Expect = 3e-71
Identities = 135/149 (90%), Positives = 144/149 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV+VV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIA+ MR RS+AKEL+GTV+EILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 136 TCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sw|P50883|RL12_ARATH 60S ribosomal protein L12.
Length = 166
Score = 268 bits (686), Expect = 3e-71
Identities = 135/149 (90%), Positives = 144/149 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV+VV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIA+ MR RS+AKEL+GTV+EILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TCVSVGCTVDGKDPKD+QQEI DGEVEIP
Sbjct: 136 TCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164
>sptr|Q9FF52|Q9FF52 60S ribosomal protein L12 (AT5g60670/mup24_80).
Length = 166
Score = 268 bits (685), Expect = 4e-71
Identities = 134/150 (89%), Positives = 146/150 (97%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV+VV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKH+GNIS DDVIEIAK MR RS+AKEL+GTVKEILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTVKEILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
TCVSVGCTVDGKDPKDLQ+EI+ G+++IP+
Sbjct: 136 TCVSVGCTVDGKDPKDLQEEINSGDIDIPN 165
>sptr|Q9LFH5|Q9LFH5 60S ribosomal protein L12-like protein.
Length = 166
Score = 267 bits (683), Expect = 7e-71
Identities = 134/149 (89%), Positives = 144/149 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV+VV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKH+GNIS DDV EIA+ MR RS+AKEL+GTV+EILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILG 135
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TCVSVGCTVDGKDPKDLQQEI +GE+EIP
Sbjct: 136 TCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164
>sw|P50884|RL12_CHLRE 60S ribosomal protein L12 (Fragment).
Length = 157
Score = 239 bits (610), Expect = 2e-62
Identities = 119/151 (78%), Positives = 133/151 (88%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQAK+SV+
Sbjct: 7 RVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQAKISVI 66
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEP RDRKK KNIKH+G++++ D+IEIA+ MR RS AK+LA KEILG
Sbjct: 67 PSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANGCKEILG 126
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T VSVGC VDGKDP+D+ IDDG +EIP A
Sbjct: 127 TAVSVGCKVDGKDPRDVISAIDDGAIEIPDA 157
>sw|O75000|RL12_SCHPO 60S ribosomal protein L12.
Length = 165
Score = 234 bits (598), Expect = 5e-61
Identities = 116/149 (77%), Positives = 134/149 (89%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEV S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVTVKLT+QNRQA VSVV
Sbjct: 16 RAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVTVKLTIQNRQAAVSVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+ALVIKALKEP RDRKK KN+ HSGN+SLD++IE+A+TMR +S+AKEL+GTVKEILG
Sbjct: 75 PSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKSLAKELSGTVKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
T SVGCTVDGK+P D+Q+EID+GE+EIP
Sbjct: 135 TAFSVGCTVDGKNPHDVQKEIDNGEIEIP 163
>sptr|Q9ZSL1|Q9ZSL1 Ribosomal protein L12 (Fragment).
Length = 142
Score = 234 bits (597), Expect = 6e-61
Identities = 122/127 (96%), Positives = 122/127 (96%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV NRQAKVSVV
Sbjct: 16 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVXNRQAKVSVV 75
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVI IAK MR RSMAKEL GTVKEILG
Sbjct: 76 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIXIAKVMRPRSMAKELQGTVKEILG 135
Query: 274 TCVSVGC 254
TCVSVGC
Sbjct: 136 TCVSVGC 142
>sptr|Q8AVW0|Q8AVW0 Similar to ribosomal protein L12.
Length = 165
Score = 221 bits (564), Expect = 4e-57
Identities = 107/151 (70%), Positives = 132/151 (87%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VV
Sbjct: 16 RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKK KNIKH+GNIS+D+VI IA+ MR+RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKQKNIKHNGNISMDEVINIARQMRHRSLARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T SVGC VDG+ P D+ +I+ GE+E P++
Sbjct: 135 TAQSVGCNVDGRHPHDIIDDINSGELECPAS 165
>sptrnew|EAA13967|EAA13967 AgCP8207 (Fragment).
Length = 174
Score = 219 bits (559), Expect = 2e-56
Identities = 108/150 (72%), Positives = 127/150 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T DWKGL++TV LT+QNRQA +SVV
Sbjct: 25 RCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATG-DWKGLKITVCLTIQNRQAAISVV 83
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAA+L++KALKEP RDRKKVKNIKH+GNI+ D+VI IA+ MR RSMA+ELAGT KE+LG
Sbjct: 84 PSAASLIVKALKEPPRDRKKVKNIKHNGNITFDEVINIARVMRPRSMARELAGTCKEVLG 143
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
T SVGCT+DG+ P D+ +I G +EIPS
Sbjct: 144 TAQSVGCTIDGRSPHDVIDDISSGAIEIPS 173
>sw|P35979|RL12_MOUSE 60S ribosomal protein L12.
Length = 165
Score = 219 bits (557), Expect = 3e-56
Identities = 105/151 (69%), Positives = 130/151 (86%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VV
Sbjct: 16 RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IA+ MR+RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 135 TAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sw|P30050|RL12_HUMAN 60S ribosomal protein L12.
Length = 165
Score = 219 bits (557), Expect = 3e-56
Identities = 105/151 (69%), Positives = 130/151 (86%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VV
Sbjct: 16 RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IA+ MR+RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 135 TAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sw|P23358|RL12_RAT 60S ribosomal protein L12.
Length = 165
Score = 218 bits (554), Expect = 6e-56
Identities = 104/151 (68%), Positives = 130/151 (86%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VV
Sbjct: 16 RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKK KNIKH+GNI+ D+++ IA+ MR+RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 135 TAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptrnew|AAM68299|AAM68299 CG3195-PA (CG3195-PB).
Length = 165
Score = 217 bits (552), Expect = 1e-55
Identities = 106/150 (70%), Positives = 127/150 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++TV LT+QNRQA +SVV
Sbjct: 16 RCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKITVCLTIQNRQAAISVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAA+L+IKALKEP RDRKK KNIKHSGNI +D++ IA+ MR RSMA+EL GT KE+LG
Sbjct: 75 PSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
T SVGCTVDGK P D+ E+++G +E+P+
Sbjct: 135 TAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164
>sptr|Q9W1B9|Q9W1B9 RE28824p.
Length = 165
Score = 217 bits (552), Expect = 1e-55
Identities = 106/150 (70%), Positives = 127/150 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEVGA SSLAPKIGPLGLSPKKIG+DIAK T+ DWKGL++TV LT+QNRQA +SVV
Sbjct: 16 RCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATS-DWKGLKITVCLTIQNRQAAISVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAA+L+IKALKEP RDRKK KNIKHSGNI +D++ IA+ MR RSMA+EL GT KE+LG
Sbjct: 75 PSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
T SVGCTVDGK P D+ E+++G +E+P+
Sbjct: 135 TAQSVGCTVDGKHPHDVIDELNEGSIEVPA 164
>sptr|Q7ZUG1|Q7ZUG1 Similar to ribosomal protein L12.
Length = 165
Score = 216 bits (550), Expect = 2e-55
Identities = 104/150 (69%), Positives = 129/150 (86%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKG R+TVKLT+QNRQA + VV
Sbjct: 16 RCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGPRITVKLTIQNRQAAIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKKVKNIKHSG+++ D+++ IA+ MR+RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKVKNIKHSGSVAFDEIVNIARVMRHRSIARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
T SVGCT+DG+ P D+ +I+ G VE P+
Sbjct: 135 TAQSVGCTIDGRLPHDVIDDINSGAVECPT 164
>sptrnew|EAA32167|EAA32167 Hypothetical protein.
Length = 165
Score = 215 bits (548), Expect = 3e-55
Identities = 106/149 (71%), Positives = 128/149 (85%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVTVKLT+QNRQA VSVV
Sbjct: 16 RATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKLTIQNRQAAVSVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
P+A+ALVI+ALKEP RDRKK KNIKH+ ++S D+++EIA+TMR +S +KEL GTV E+LG
Sbjct: 75 PTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFSKELKGTVLEVLG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
T SVGC VDGK PK +Q+ I GE+++P
Sbjct: 135 TAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sw|Q9C285|RL12_NEUCR 60S ribosomal protein L12.
Length = 165
Score = 215 bits (548), Expect = 3e-55
Identities = 106/149 (71%), Positives = 128/149 (85%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA+S+LAPKIGPLGLSPKK+GEDIAK T DWKGLRVTVKLT+QNRQA VSVV
Sbjct: 16 RATGGEVGASSALAPKIGPLGLSPKKVGEDIAKATG-DWKGLRVTVKLTIQNRQAAVSVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
P+A+ALVI+ALKEP RDRKK KNIKH+ ++S D+++EIA+TMR +S +KEL GTV E+LG
Sbjct: 75 PTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFSKELKGTVLEVLG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
T SVGC VDGK PK +Q+ I GE+++P
Sbjct: 135 TAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
>sptr|Q95V38|Q95V38 Ribosomal protein L12.
Length = 164
Score = 214 bits (544), Expect = 9e-55
Identities = 108/148 (72%), Positives = 128/148 (86%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T+ DWKGL++TV+L VQNRQA++SVV
Sbjct: 16 RCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLIVQNRQAQISVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAAAL+I+ALKEP RDRKK KNIKH+GNI+L+DVI IAKTMR RSMA+ L+GTVKEILG
Sbjct: 75 PSAAALIIRALKEPPRDRKKQKNIKHNGNITLEDVISIAKTMRARSMARYLSGTVKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEI 191
T SVGCTV+G+ P DL +I+ G + I
Sbjct: 135 TAQSVGCTVEGRPPHDLINDINSGALTI 162
>sw|O62290|RL12_CAEEL 60S ribosomal protein L12.
Length = 165
Score = 213 bits (543), Expect = 1e-54
Identities = 103/150 (68%), Positives = 129/150 (86%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEVGA S+LAPK+GPLGLSPKKIGEDIAK T +DWKGL+VT KLT+QNR AK+ VV
Sbjct: 16 RCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKAT-QDWKGLKVTCKLTIQNRVAKIDVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAA+L++K LKEP RDRKKVKN+KH+G++++D +I+IA+ MR RSMAK+L GTVKEILG
Sbjct: 75 PSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
T SVGCT+DG+ P D+ + I +GE+EIP+
Sbjct: 135 TAQSVGCTIDGQHPHDIIESIANGEIEIPA 164
>sptr|Q9NQ02|Q9NQ02 DJ999L4.1 (Novel protein similar to ribosomal
protein L12 (RPL12)).
Length = 165
Score = 213 bits (542), Expect = 2e-54
Identities = 102/151 (67%), Positives = 128/151 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK DWKGLR+TVKLT+QNRQA++ VV
Sbjct: 16 RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKAMG-DWKGLRITVKLTIQNRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+A++IKALKEP RDRKK KNIKHSGNI+ D+++ IA+ MR++S+A+EL+GT KEILG
Sbjct: 75 PSASAMIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHQSLARELSGTTKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T SVGC VDG+ P D+ +I+ G VE P++
Sbjct: 135 TAQSVGCNVDGRHPHDIIDDINSGAVECPAS 165
>sptr|Q90YV6|Q90YV6 Ribosomal protein L12.
Length = 167
Score = 213 bits (541), Expect = 2e-54
Identities = 103/147 (70%), Positives = 126/147 (85%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA SSLAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA + VV
Sbjct: 16 RCTGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAAIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKKVKNIKHSG++ D+++ IA+ MR RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKVKNIKHSGSVPFDEIVNIARVMRPRSIARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVE 194
T SVGCT+DG+ P D+ +I+ G+ E
Sbjct: 135 TAQSVGCTIDGRLPHDVIDDINSGKQE 161
>sptr|Q8C2K0|Q8C2K0 Ribosomal protein L12.
Length = 164
Score = 212 bits (539), Expect = 3e-54
Identities = 103/150 (68%), Positives = 127/150 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VV
Sbjct: 16 RCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+AL+IKALKEP RDRKK KNIKHSGNI+ D+++ IA+ MR+RS+A+EL+GT+KEILG
Sbjct: 75 PSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPS 185
T SVGC VDG+ P D+ +I+ +PS
Sbjct: 135 TAQSVGCNVDGRHPHDIIDDINSWCSGVPS 164
>sptr|Q9NFW1|Q9NFW1 L12 ribosomal protein.
Length = 165
Score = 212 bits (539), Expect = 3e-54
Identities = 102/151 (67%), Positives = 127/151 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
RV GGEVGA SSLAPKIGPLGLSPKK+G+DIAK T +WKGL+VTVKL +QNR A +SVV
Sbjct: 16 RVIGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATG-EWKGLKVTVKLVIQNRNATISVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSAA+L+IK LKEP RDRKKVK++KH+G+I+LD++ +IA+ MR RS+A++ +GTVKEILG
Sbjct: 75 PSAASLIIKYLKEPPRDRKKVKHVKHNGDITLDNIFDIARQMRERSLARKFSGTVKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T SVGCT+DGK P D+ + I GE+E P A
Sbjct: 135 TAQSVGCTIDGKSPHDIIESIQSGEIECPEA 165
>sptr|Q8ITA1|Q8ITA1 Ribosomal protein L12.
Length = 165
Score = 206 bits (523), Expect = 2e-52
Identities = 102/149 (68%), Positives = 126/149 (84%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
+ GGEV A SSLAPKIGPLGLSPKKIG+DI+K T ++WKGL++TVKL VQNRQAKV VV
Sbjct: 16 KAVGGEVPATSSLAPKIGPLGLSPKKIGDDISKST-QEWKGLKITVKLVVQNRQAKVEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA++LVIKALKEP RDRKKVK++KH+GNIS+D++I IA+ MR RSMA+ LAGT KEILG
Sbjct: 75 PSASSLVIKALKEPPRDRKKVKHVKHNGNISMDEIIRIARIMRPRSMARNLAGTCKEILG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
T SVGC+V+ P D+ +I+ GE+E+P
Sbjct: 135 TAQSVGCSVEKCPPHDVIDKINSGEIEVP 163
>sptr|Q8I3T8|Q8I3T8 60S ribosomal protein L12, putative.
Length = 156
Score = 205 bits (522), Expect = 3e-52
Identities = 97/149 (65%), Positives = 123/149 (82%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R GGEVGA+S L+PK+GPLGLSPKK+G+DIAKET + WKGL++ VKLT+QNRQAKV VV
Sbjct: 7 RQVGGEVGASSVLSPKLGPLGLSPKKVGDDIAKET-QSWKGLKICVKLTIQNRQAKVEVV 65
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
P++AAL++K L E RDRKKVKNIKH+GN+ L+ V IA+ M+ +S AKE GTVKE+LG
Sbjct: 66 PTSAALILKELNEAPRDRKKVKNIKHNGNLKLEQVYSIARVMKEKSRAKEFKGTVKEMLG 125
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIP 188
TC S+GCTVDGK P +Q+ ID GE+++P
Sbjct: 126 TCNSIGCTVDGKKPTTIQEMIDSGEIDVP 154
>sptrnew|CAA16156|CAA16156 CICK0721Q.2 (60S Ribosomal Protein L12
LIKE protein).
Length = 165
Score = 204 bits (519), Expect = 7e-52
Identities = 98/151 (64%), Positives = 126/151 (83%)
Frame = -1
Query: 634 RVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVV 455
R T GEVGA S+LAPKIGPLGLSPKK+G+DIAK T DWKGLR+TVKLT++NRQA++ VV
Sbjct: 16 RCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIENRQAQIEVV 74
Query: 454 PSAAALVIKALKEPERDRKKVKNIKHSGNISLDDVIEIAKTMRNRSMAKELAGTVKEILG 275
PSA+A +IKALK+P RDRKK KNIKH+GNI+ D+++ IA+ MR+RS+A+EL+GT+KEI G
Sbjct: 75 PSASAPIIKALKKPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEIPG 134
Query: 274 TCVSVGCTVDGKDPKDLQQEIDDGEVEIPSA 182
T S+GC VDG P D+ +I+ G VE P++
Sbjct: 135 TAQSMGCNVDGHHPHDIIDDINSGAVECPAS 165
Database: /db/trembl-ebi/tmp/swall
Posted date: Sep 26, 2003 8:29 PM
Number of letters in database: 406,886,216
Number of sequences in database: 1,272,877
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,578,118
Number of Sequences: 1272877
Number of extensions: 5517889
Number of successful extensions: 19391
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19325
length of database: 406,886,216
effective HSP length: 117
effective length of database: 257,959,607
effective search space used: 23990243451
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)